View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15941_high_117 (Length: 305)
Name: NF15941_high_117
Description: NF15941
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15941_high_117 |
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Alignment Details
Target: chr1 (Bit Score: 247; Significance: 1e-137; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 17 - 279
Target Start/End: Original strand, 7410207 - 7410469
Alignment:
| Q |
17 |
cactaatgctaccttaaaaagtgattctaccacttacctccttatctagatctctctcttcatatctctttacattttaattgtaaaataaaactatata |
116 |
Q |
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| T |
7410207 |
cactaatgctaccttaaaaagtgattccaccacttacctccttatctagatctctctcttcttatctctttacattttaattgtaaaataaaactatata |
7410306 |
T |
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| Q |
117 |
tcggcgagttatgcatattaaaagctgtaaaaataggtactaataattgtttatgcagaagaaactaattacgtctctctcatttgcacaactcacatgc |
216 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
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| T |
7410307 |
tcggcgagttatgcatattaaaagctgtaaaaataggtactaataattgtttatgcagaagaaactaattatgtctctctcatttgcacaactcacatgc |
7410406 |
T |
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| Q |
217 |
aatttctacagctataggtgcagtaaagtgtcctgtgactggcattgtttattttaggaccac |
279 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
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| T |
7410407 |
aatttctacagctataggtgcagtaaagtgtcctgtgactggctttgtttattttaggaccac |
7410469 |
T |
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