View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15941_high_124 (Length: 296)
Name: NF15941_high_124
Description: NF15941
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15941_high_124 |
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Alignment Details
Target: chr7 (Bit Score: 255; Significance: 1e-142; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 18 - 288
Target Start/End: Original strand, 47122553 - 47122823
Alignment:
| Q |
18 |
attatttgtattctgtagtgtccatatacttctctgactcaaatatcatcctccggataaatttatataatcctttaacaaattgttttatctcaaataa |
117 |
Q |
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| T |
47122553 |
attatttgtattatgtagtgtccatatacttctctgactccaatgtcatcctccggataaatttatataatcctttaacaaattgttttatctcaaataa |
47122652 |
T |
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| Q |
118 |
aattattttcttataaaaacttaaaaatccacatcaaattgaaaattaccttgcaagcctaagtacttataatcaaaatggtcaagaaatgatattcaca |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47122653 |
aattattttcttataaaaacttaaaaatccacatcaaattgaaaattaccttgcaagcctaagtacttataatcaaaatggtcaagaaatgatattcaca |
47122752 |
T |
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| Q |
218 |
cattcatataagagacgcttttgctacaagctacatttgctaatttatctttaaaatacatgtttcatctc |
288 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
47122753 |
cattcatataagagacgcttttgctacaagctacatttgctaatttatctttaatatacatgtttcatctc |
47122823 |
T |
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