View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15941_high_125 (Length: 296)
Name: NF15941_high_125
Description: NF15941
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15941_high_125 |
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Alignment Details
Target: chr7 (Bit Score: 259; Significance: 1e-144; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 11 - 281
Target Start/End: Original strand, 39849073 - 39849343
Alignment:
| Q |
11 |
caaaggtgacagactcagactcttaggagcccgagccagagccagagcctcagcatgtcccgagtctaagtttgtgcacgaggcacaacaggtggaggtt |
110 |
Q |
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| T |
39849073 |
caaaggtgacagactcagactcttaggagccagagccagagccagagcctcagcatgtcccgagtctaagtttgtgcacgaggcacaacaggtggaggtt |
39849172 |
T |
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| Q |
111 |
cagcaggagtaggcgtcgacacagcctcggaagttacatcctagtggtccgtttgacatgctaaagcttttaaccttgataattcatgtatgcctgcctg |
210 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
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| T |
39849173 |
cagcaggagtaggcgtcgacacagcctcggaagttacatcctagtggtccgtttgacatgttaaagcttttaaccttgataattcatgtatgcctgcctg |
39849272 |
T |
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| Q |
211 |
tatgataagggtttactctcaccactctagcataaaatcgccctctcagaagatgcatatataagtatatt |
281 |
Q |
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||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
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| T |
39849273 |
tatgataagggtttactctcaccactctaccataaaatcgccctctcagaagatgcatatataagtatatt |
39849343 |
T |
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