View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15941_high_126 (Length: 292)
Name: NF15941_high_126
Description: NF15941
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15941_high_126 |
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Alignment Details
Target: chr5 (Bit Score: 257; Significance: 1e-143; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 5 - 289
Target Start/End: Original strand, 32003043 - 32003327
Alignment:
| Q |
5 |
gccgcagacacactgttcaaatatgtcgacaccgtgtccatgccataaaggtctgtaagactatgaaatgaagacaaaagcagcaagaccaagaaccaac |
104 |
Q |
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||||||||| | ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32003043 |
gccgcagactcgctgttcaaatatgtcgacaccgtgtcctcgccataaaggtctgtaagactatgaaatgaagacaaaagcagcaagaccaagaaccaac |
32003142 |
T |
|
| Q |
105 |
cataactgtttcaaggttgcagtcaagtcaaggccataattccagcaccagtaactatattgactcaccaggctgaaaacagcaccagaaaactgaagct |
204 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
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| T |
32003143 |
cataactgtttcaaggttgcagtcaagtcaaggccataattccagcaccagtaactatattgactcaccaggctgacaacagcaccagaaaactgaagct |
32003242 |
T |
|
| Q |
205 |
ataatgaaatcattaaacccataatcactctcatggatttgggtgccttttcattgacaaccaccttgttctttcttgatttgtt |
289 |
Q |
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|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32003243 |
atcctgaaatcattaaacccataatcactctcatggatttgggtgccttttcattgacaaccaccttgttctttcttgatttgtt |
32003327 |
T |
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