View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15941_high_155 (Length: 259)
Name: NF15941_high_155
Description: NF15941
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15941_high_155 |
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Alignment Details
Target: chr8 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 37055397 - 37055161
Alignment:
| Q |
1 |
tgaaatctcaatgcaagttattcaatcttcctgatcagaatcagaatcagaatcagactcaagtaggtgttgcttcgcctccggtgaaggttttaggatt |
100 |
Q |
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| T |
37055397 |
tgaaatctcaatgcaagttattcaatcttcctgatcagaatcagaatcaga------ctcaagtaggtgttgcttcgcctccggtgaaggttttaggatt |
37055304 |
T |
|
| Q |
101 |
gcttaaacatgaaggaataataagatacatgggaaacaacaataacattgaatcaatcatacaaaaacatttcataacacattgggaaggaaaaacagaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37055303 |
gcttaaacatgaaggaataataagatacatgggaaacaacaataacattgaatcaatcatacaaaaacatttcataacacattgggaaggaaaaacagaa |
37055204 |
T |
|
| Q |
201 |
ctaaaagtgtaccctttggtgaaatcattttcaatttcattag |
243 |
Q |
| |
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||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
37055203 |
ctaaaagtgtaccctttggtgaaatcattttcaatttcattag |
37055161 |
T |
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