View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15941_high_165 (Length: 253)
Name: NF15941_high_165
Description: NF15941
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15941_high_165 |
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Alignment Details
Target: chr2 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 1 - 244
Target Start/End: Original strand, 2459089 - 2459332
Alignment:
| Q |
1 |
ccaaatgcagttacgtggtcttgcaagaaacaatatacgattcctcaatcctctacaaattaaaggatgaatatcgaaccattggtttaaccaccacata |
100 |
Q |
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|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2459089 |
ccaaatgcagtttcgtggtcttgcaagaaacaatatacgattcctcaatcctctacaaattaaaggatgaatatcgaaccattggtttaaccaccacata |
2459188 |
T |
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| Q |
101 |
attactctggccacgacaactactctatcaactctctcaactgtcaaccatttacacagaaaaattggagccaactaccaatgtgcaaatcttgtatttc |
200 |
Q |
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||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2459189 |
attactctggccatgaaaactactctatcaactctctcaactgtcaaccatttacacagaaaaattggagccaactaccaatgtgcaaatcttgtatttc |
2459288 |
T |
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| Q |
201 |
acacaagaatgaagcacctatcaattgactaccatattcttcga |
244 |
Q |
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||||||||||||||||||||||||||| ||||||| || ||||| |
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| T |
2459289 |
acacaagaatgaagcacctatcaattgcctaccattttgttcga |
2459332 |
T |
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