View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15941_high_193 (Length: 234)
Name: NF15941_high_193
Description: NF15941
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15941_high_193 |
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Alignment Details
Target: chr7 (Bit Score: 160; Significance: 2e-85; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 51 - 218
Target Start/End: Complemental strand, 32061678 - 32061512
Alignment:
| Q |
51 |
aagaagtccaacaacgttaacataattttgggactaacttaaagaacaaacttgacacatatcagataatttcacatttcaatcatgatggctccttttt |
150 |
Q |
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| T |
32061678 |
aagaagtccaacaacgttaacataattttgggactaacttaaagaacaaacttgacacatatcagataatttcacatttcaatcatgatggctccttttt |
32061579 |
T |
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| Q |
151 |
tcgtattttcctcttcaacgcagtggagagtttaagaatcaagttggttcaagatgcaatatctagtt |
218 |
Q |
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| T |
32061578 |
tcgtattttcctcttcaacgcagtggagagtttaagaatcaagttggttcaagatgc-atatctagtt |
32061512 |
T |
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