View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15941_high_200 (Length: 229)
Name: NF15941_high_200
Description: NF15941
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15941_high_200 |
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Alignment Details
Target: chr7 (Bit Score: 172; Significance: 1e-92; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 27 - 210
Target Start/End: Original strand, 45666256 - 45666439
Alignment:
| Q |
27 |
attgtcatcgccaatggctaaacatttctggcttttcattgcaataggacttgttatcatcaacttggtttatggtcaacaacatcacttcttcaatgaa |
126 |
Q |
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| T |
45666256 |
attgtcatcgccaatggctaaacttttctggcttttcattgcaataggacttgttatcatcaacttggtttatggtcaacaacatcacttcttcaatgaa |
45666355 |
T |
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| Q |
127 |
accgaagaactctttctgttagaggctcatgaacatgcaacatcctttcttgaggagggtaatggaaatcctcttctcgtagga |
210 |
Q |
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|| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45666356 |
actgaagaactctttctgttagaggctcatgaacatgcagcatcctttcttgaggagggtaatggaaatcctcttctcgtagga |
45666439 |
T |
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