View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15941_high_25 (Length: 471)

Name: NF15941_high_25
Description: NF15941
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15941_high_25
NF15941_high_25
[»] chr4 (20 HSPs)
chr4 (1-471)||(40283533-40284003)
chr4 (306-390)||(23494283-23494368)
chr4 (285-367)||(8019718-8019801)
chr4 (338-398)||(48831619-48831683)
chr4 (333-395)||(25856977-25857038)
chr4 (415-471)||(7949415-7949471)
chr4 (415-471)||(49938797-49938853)
chr4 (285-367)||(8020164-8020246)
chr4 (338-385)||(21517384-21517431)
chr4 (338-385)||(21518406-21518453)
chr4 (303-394)||(56094380-56094470)
chr4 (415-449)||(12793872-12793906)
chr4 (416-446)||(23491991-23492021)
chr4 (363-396)||(24194911-24194944)
chr4 (415-443)||(13483101-13483129)
chr4 (423-471)||(22096577-22096625)
chr4 (415-471)||(28635755-28635811)
chr4 (303-391)||(42679191-42679278)
chr4 (423-471)||(49262653-49262701)
chr4 (423-471)||(55427169-55427217)
[»] chr5 (20 HSPs)
chr5 (169-397)||(15088954-15089185)
chr5 (281-400)||(12920283-12920400)
chr5 (219-384)||(4241443-4241610)
chr5 (219-400)||(34367273-34367456)
chr5 (219-400)||(4248823-4249003)
chr5 (361-400)||(17053557-17053596)
chr5 (338-396)||(5552605-5552663)
chr5 (287-397)||(40138531-40138643)
chr5 (415-471)||(16773866-16773922)
chr5 (415-471)||(17155881-17155937)
chr5 (170-228)||(34366815-34366873)
chr5 (338-391)||(994890-994942)
chr5 (360-397)||(8822504-8822541)
chr5 (416-449)||(17877122-17877155)
chr5 (423-468)||(24907551-24907596)
chr5 (188-228)||(4249315-4249355)
chr5 (186-226)||(10099822-10099862)
chr5 (362-394)||(16600580-16600612)
chr5 (415-471)||(17028225-17028281)
chr5 (415-471)||(35705045-35705101)
[»] chr1 (19 HSPs)
chr1 (219-398)||(24755022-24755195)
chr1 (298-382)||(42669124-42669209)
chr1 (303-394)||(31165617-31165707)
chr1 (308-393)||(15183875-15183959)
chr1 (309-397)||(46798397-46798483)
chr1 (415-448)||(1094607-1094640)
chr1 (331-400)||(23532891-23532960)
chr1 (331-391)||(51062078-51062139)
chr1 (415-471)||(4280412-4280468)
chr1 (303-398)||(52650644-52650740)
chr1 (303-394)||(35307251-35307341)
chr1 (415-471)||(21547441-21547497)
chr1 (415-447)||(24047063-24047095)
chr1 (423-471)||(24730443-24730491)
chr1 (362-394)||(27458299-27458331)
chr1 (416-468)||(27476733-27476785)
chr1 (415-471)||(36124892-36124948)
chr1 (415-471)||(44126454-44126510)
chr1 (341-400)||(47763239-47763299)
[»] chr2 (20 HSPs)
chr2 (213-400)||(11862106-11862297)
chr2 (309-382)||(25319118-25319191)
chr2 (303-381)||(35436210-35436287)
chr2 (333-394)||(83570-83630)
chr2 (419-471)||(11251146-11251198)
chr2 (360-391)||(7889403-7889434)
chr2 (415-446)||(25637235-25637266)
chr2 (338-396)||(10019620-10019678)
chr2 (321-394)||(18077363-18077437)
chr2 (419-469)||(29197341-29197391)
chr2 (338-395)||(33428792-33428848)
chr2 (339-396)||(35716645-35716702)
chr2 (415-448)||(41390305-41390338)
chr2 (338-394)||(7401067-7401123)
chr2 (415-471)||(12517715-12517770)
chr2 (415-471)||(21213828-21213884)
chr2 (415-471)||(37480134-37480190)
chr2 (417-469)||(37971956-37972008)
chr2 (423-471)||(42327364-42327412)
chr2 (415-471)||(42602613-42602669)
[»] chr8 (19 HSPs)
chr8 (246-400)||(4187205-4187360)
chr8 (303-396)||(1228941-1229035)
chr8 (309-393)||(9550693-9550777)
chr8 (288-394)||(35749059-35749165)
chr8 (415-471)||(16852399-16852455)
chr8 (291-367)||(28451913-28451990)
chr8 (341-394)||(29029115-29029168)
chr8 (415-471)||(28783119-28783175)
chr8 (423-471)||(29858018-29858066)
chr8 (415-471)||(31088732-31088788)
chr8 (415-448)||(8485081-8485114)
chr8 (321-394)||(32350818-32350890)
chr8 (321-394)||(32367479-32367551)
chr8 (417-449)||(3305151-3305183)
chr8 (415-471)||(6536579-6536635)
chr8 (415-471)||(11793482-11793538)
chr8 (419-471)||(19703452-19703504)
chr8 (338-394)||(26600870-26600925)
chr8 (416-448)||(40872958-40872990)
[»] chr6 (6 HSPs)
chr6 (321-394)||(18130600-18130673)
chr6 (321-395)||(23888264-23888338)
chr6 (303-394)||(11751788-11751878)
chr6 (416-471)||(13441116-13441171)
chr6 (415-446)||(24641151-24641182)
chr6 (415-447)||(18263923-18263955)
[»] chr3 (12 HSPs)
chr3 (225-396)||(10856309-10856473)
chr3 (338-400)||(17549876-17549939)
chr3 (338-400)||(29491090-29491152)
chr3 (331-389)||(30676359-30676417)
chr3 (415-471)||(8853760-8853816)
chr3 (415-471)||(44069817-44069873)
chr3 (415-471)||(52769944-52770000)
chr3 (415-471)||(54990761-54990817)
chr3 (361-400)||(20524581-20524620)
chr3 (415-469)||(14339671-14339725)
chr3 (281-390)||(49292115-49292224)
chr3 (333-400)||(33282675-33282739)
[»] chr7 (14 HSPs)
chr7 (168-242)||(25576296-25576370)
chr7 (415-471)||(41487418-41487474)
chr7 (357-400)||(30738482-30738525)
chr7 (285-400)||(43230753-43230863)
chr7 (361-395)||(33763127-33763161)
chr7 (415-471)||(21558187-21558243)
chr7 (416-468)||(22932674-22932725)
chr7 (415-471)||(29385704-29385760)
chr7 (415-471)||(30579394-30579450)
chr7 (415-469)||(43590968-43591022)
chr7 (341-394)||(30053934-30053986)
chr7 (309-394)||(33407136-33407220)
chr7 (333-394)||(34595923-34595983)
chr7 (247-319)||(25576135-25576207)
[»] scaffold0001 (1 HSPs)
scaffold0001 (303-394)||(508077-508167)
[»] scaffold0100 (1 HSPs)
scaffold0100 (338-396)||(39338-39396)
[»] scaffold0172 (1 HSPs)
scaffold0172 (416-471)||(15739-15794)
[»] scaffold0115 (1 HSPs)
scaffold0115 (415-449)||(42625-42659)
[»] scaffold0258 (1 HSPs)
scaffold0258 (415-471)||(15284-15340)


Alignment Details
Target: chr4 (Bit Score: 409; Significance: 0; HSPs: 20)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 409; E-Value: 0
Query Start/End: Original strand, 1 - 471
Target Start/End: Original strand, 40283533 - 40284003
Alignment:
Q  1 aaaagctaaaaggactagactactaacttatacatataaaagggccaacaacctaagtgcaatagcatattatctaacacctcccttcaaactcccgatg 100  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40283533 aaaagctaaaaggactagactactaacttataaatataaaagggccaacaacctaagtgcaatagcatattatctaacacctcccttcaaactcccgatg 40283632  T
Q  101 tatcaataggaatcatcgagagtatgtcaatctacaagcgaaaatgtgctcaatagtaaataacataccaaatgcatcctaggtttctttaagtttaacg 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  40283633 tatcaataggaatcatcgagagtatgtcaatctacaagcgaaaatgtgctcaatagtaaataacataccaaatgcatcctaggtttctttaagtttgacg 40283732  T
Q  201 tttgtatctgattagtccttttagttttaaattggtcctttaggtcgtaaaagtgaacgagttagtccttcatttttatcttgcaacaaattgatctctt 300  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  40283733 tttgtatctgattagtccttttagttttaaattggtcctttaggtcgtaaaagtgaacgagttagtcctttatttttattttgcaacaaattgatctctt 40283832  T
Q  301 tcttcatccaactttgttataaagtgcttaatgaccttttaacattgaggtggaaggtccaaaaagtgtttatgacaccaaacatgattacttacataca 400  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40283833 tcttcatccaactttgttataaagtgcttaatgaccttttaacattgaggtggaaggtccaaaaagtgtttatgacaccaaacatgattacttacataca 40283932  T
Q  401 nnnnnnnnnnnnnngaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagacct 471  Q
                  |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  40283933 ttttttttgtttttgaagaagttaaattagcccacctaaattggcaccaagcagaatcaaaccttagacct 40284003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 306 - 390
Target Start/End: Complemental strand, 23494368 - 23494283
Alignment:
Q  306 atccaactttgttataaagtgctta-atgaccttttaacattgaggtggaaggtccaaaaagtgtttatgacaccaaacatgatta 390  Q
    |||||||||||||| |||||||||| |||||  |||||||| |||||||||| |||||||| |||||||| ||| |||||||||||    
T  23494368 atccaactttgttaaaaagtgcttacatgactatttaacatcgaggtggaagatccaaaaaatgtttatggcacgaaacatgatta 23494283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 285 - 367
Target Start/End: Complemental strand, 8019801 - 8019718
Alignment:
Q  285 aacaaattgatctctttcttcatccaactttgttataaagtgctta-atgaccttttaacattgaggtggaaggtccaaaaagt 367  Q
    ||||||||||||  ||| ||||| ||||||||||| |||||| ||| |||| |||||||||||||| ||||| |||||||||||    
T  8019801 aacaaattgatccattttttcattcaactttgttaaaaagtgtttacatgatcttttaacattgagttggaacgtccaaaaagt 8019718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 338 - 398
Target Start/End: Original strand, 48831619 - 48831683
Alignment:
Q  338 tttaacattgaggtggaaggtccaaaaagtgt----ttatgacaccaaacatgattacttacata 398  Q
    ||||||||||||||| ||||||||||||||||    |||||| ||||||||||||||||||||||    
T  48831619 tttaacattgaggtgaaaggtccaaaaagtgtttaattatgataccaaacatgattacttacata 48831683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 333 - 395
Target Start/End: Original strand, 25856977 - 25857038
Alignment:
Q  333 gaccttttaacattgaggtggaaggtccaaaaagtgtttatgacaccaaacatgattacttac 395  Q
    |||| |||||||||||||||| || |||||||| ||||||||||| |||||||||||| ||||    
T  25856977 gaccatttaacattgaggtggtagatccaaaaa-tgtttatgacatcaaacatgattatttac 25857038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 415 - 471
Target Start/End: Original strand, 7949415 - 7949471
Alignment:
Q  415 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagacct 471  Q
    ||||||| ||||||||||||||||||||| |||||   |||||| ||||||||||||    
T  7949415 gaagaagctaaattagcccacctaaattgacaccagagagaatcgaacctgagacct 7949471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 415 - 471
Target Start/End: Original strand, 49938797 - 49938853
Alignment:
Q  415 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagacct 471  Q
    ||||||| ||||||| ||||||||||||||||| | | |||||||||||| ||||||    
T  49938797 gaagaagctaaattaacccacctaaattggcactaggaagaatcaaacctaagacct 49938853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 285 - 367
Target Start/End: Complemental strand, 8020246 - 8020164
Alignment:
Q  285 aacaaattgatctctttcttcatccaactttgttataaagtgctta-atgaccttttaacattgaggtggaaggtccaaaaagt 367  Q
    ||||||||||||  ||| ||||| ||||||||||| |||||| ||| |||| |||||||||||||| | ||| |||||||||||    
T  8020246 aacaaattgatcatttt-ttcattcaactttgttaaaaagtgtttacatgatcttttaacattgagttagaacgtccaaaaagt 8020164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 338 - 385
Target Start/End: Original strand, 21517384 - 21517431
Alignment:
Q  338 tttaacattgaggtggaaggtccaaaaagtgtttatgacaccaaacat 385  Q
    |||| ||||||||| |||||| ||| ||||||||||||||||||||||    
T  21517384 tttaccattgaggtagaaggttcaacaagtgtttatgacaccaaacat 21517431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 338 - 385
Target Start/End: Original strand, 21518406 - 21518453
Alignment:
Q  338 tttaacattgaggtggaaggtccaaaaagtgtttatgacaccaaacat 385  Q
    |||| ||||||||| |||||| ||| ||||||||||||||||||||||    
T  21518406 tttaccattgaggtagaaggttcaacaagtgtttatgacaccaaacat 21518453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 303 - 394
Target Start/End: Complemental strand, 56094470 - 56094380
Alignment:
Q  303 ttcatccaactttgttataaagtgcttaatgaccttttaacattgaggtggaaggtccaaaaagtgtttatgacaccaaacatgattactta 394  Q
    |||| |||||||  ||| || |||||||  |||| ||||||||| || ||| |||| ||||| |||||||||||| ||||||||||||||||    
T  56094470 ttcagccaacttcattaaaatgtgcttatagaccatttaacattaagatggtaggttcaaaa-gtgtttatgacatcaaacatgattactta 56094380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 415 - 449
Target Start/End: Original strand, 12793872 - 12793906
Alignment:
Q  415 gaagaagttaaattagcccacctaaattggcacca 449  Q
    ||||||| |||||||||||||||||||||||||||    
T  12793872 gaagaagctaaattagcccacctaaattggcacca 12793906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 416 - 446
Target Start/End: Original strand, 23491991 - 23492021
Alignment:
Q  416 aagaagttaaattagcccacctaaattggca 446  Q
    |||||||||||||||||||||||||||||||    
T  23491991 aagaagttaaattagcccacctaaattggca 23492021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 363 - 396
Target Start/End: Original strand, 24194911 - 24194944
Alignment:
Q  363 aaagtgtttatgacaccaaacatgattacttaca 396  Q
    ||||||||||||||| ||||||||||||||||||    
T  24194911 aaagtgtttatgacatcaaacatgattacttaca 24194944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 415 - 443
Target Start/End: Complemental strand, 13483129 - 13483101
Alignment:
Q  415 gaagaagttaaattagcccacctaaattg 443  Q
    |||||||||||||||||||||||||||||    
T  13483129 gaagaagttaaattagcccacctaaattg 13483101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 423 - 471
Target Start/End: Original strand, 22096577 - 22096625
Alignment:
Q  423 taaattagcccacctaaattggcaccaagcagaatcaaacctgagacct 471  Q
    ||||||||||||| ||||||||||| | | |||||| ||||||||||||    
T  22096577 taaattagcccacttaaattggcactagggagaatcgaacctgagacct 22096625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 415 - 471
Target Start/End: Complemental strand, 28635811 - 28635755
Alignment:
Q  415 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagacct 471  Q
    ||||||| |||||||||||||| ||||||||||||   |||||| ||||| ||||||    
T  28635811 gaagaagctaaattagcccacccaaattggcaccagagagaatcgaacctaagacct 28635755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 303 - 391
Target Start/End: Original strand, 42679191 - 42679278
Alignment:
Q  303 ttcatccaactttgttataaagtgcttaatgaccttttaacattgaggtggaaggtccaaaaagtgtttatgacaccaaacatgattac 391  Q
    |||| ||||||| |||| |||||| |||  |||| ||||||||| || | | |||||||||| |||||||| ||| |||||||||||||    
T  42679191 ttcagccaacttcgttaaaaagtgtttatagaccatttaacattaagatagtaggtccaaaa-gtgtttataacatcaaacatgattac 42679278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 423 - 471
Target Start/End: Original strand, 49262653 - 49262701
Alignment:
Q  423 taaattagcccacctaaattggcaccaagcagaatcaaacctgagacct 471  Q
    |||||||||||||||||||||||||   | |||||| ||||||||||||    
T  49262653 taaattagcccacctaaattggcactggggagaatcgaacctgagacct 49262701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 423 - 471
Target Start/End: Original strand, 55427169 - 55427217
Alignment:
Q  423 taaattagcccacctaaattggcaccaagcagaatcaaacctgagacct 471  Q
    |||||||||||||| |||||||||||  | |||||| ||||||||||||    
T  55427169 taaattagcccacccaaattggcaccgcggagaatcgaacctgagacct 55427217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 85; Significance: 2e-40; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 169 - 397
Target Start/End: Original strand, 15088954 - 15089185
Alignment:
Q  169 caaatgcatcctaggtttctttaagtttaacgtttgtatctgattagtccttttagttttaaattggtcctttaggtcgtaaaagtgaacgagttagtcc 268  Q
    |||||||||||  || | |||||||||| |||||| |||| |||||| ||||||||||| ||||||||||||||  | |||||||||| | |||||||||    
T  15088954 caaatgcatcccggggtcctttaagtttgacgtttctatcagattagcccttttagtttcaaattggtcctttatttagtaaaagtgagcaagttagtcc 15089053  T
Q  269 ttcatttttatc--ttgcaacaaattgatctctttcttcatccaactttgttataaagtgctta-atgaccttttaacattgaggtggaaggtccaaaaa 365  Q
    || | |||| |   ||  ||||||||| || || | |||||||| |||||||| ||||  |||| |||||| ||||||||||||||||||||||||||||    
T  15089054 ttaactttttttgtttataacaaattggtccctcttttcatccagctttgttaaaaagcacttacatgaccatttaacattgaggtggaaggtccaaaaa 15089153  T
Q  366 gtgtttatgacaccaaacatgattacttacat 397  Q
    | ||||||||||| ||| ||||||||||||||    
T  15089154 gcgtttatgacactaaatatgattacttacat 15089185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 281 - 400
Target Start/End: Original strand, 12920283 - 12920400
Alignment:
Q  281 ttgcaacaaattgatctctttcttcatccaactttgttataaagtgcttaatgaccttttaacattgaggtggaaggtccaaaaagtgtttatgacacca 380  Q
    ||||||||||||||| | |||  | |||||||||||||| |||||| |||| |||| ||||||||||||||  |||||||||||||| |||||||  |||    
T  12920283 ttgcaacaaattgattttttttct-atccaactttgttaaaaagtg-ttaaagaccatttaacattgaggtaaaaggtccaaaaagtctttatgatgcca 12920380  T
Q  381 aacatgattacttacataca 400  Q
    ||||||||||||||||||||    
T  12920381 aacatgattacttacataca 12920400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 219 - 384
Target Start/End: Original strand, 4241443 - 4241610
Alignment:
Q  219 ttttagttttaaattggtcctttaggtc-gtaaaagtgaacgagttagtccttcatttttatcttgcaacaaattgatctctttcttcatccaactttgt 317  Q
    |||| |||||||||| |||||||| ||| ||| |||||| |  |||||||||| | || | | ||| ||||||||||||  ||| ||||| |||||||||    
T  4241443 tttttgttttaaattagtcctttatgtcagtacaagtgagcatgttagtcctttaattattttttgtaacaaattgatccattttttcatacaactttgt 4241542  T
Q  318 tataaagtgctta-atgaccttttaacattgaggtggaaggtccaaaaagtgtttatgacaccaaaca 384  Q
    || ||||| |||| |||||| |||||||||||||| ||| |||||||||||||||  |||| ||||||    
T  4241543 taaaaagttcttacatgaccatttaacattgaggtcgaatgtccaaaaagtgtttccgacatcaaaca 4241610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 219 - 400
Target Start/End: Complemental strand, 34367456 - 34367273
Alignment:
Q  219 ttttagttttaaattggtcctttaggtc-gtaaaagtgaacgagttagtccttcattt--ttatcttgcaacaaattgatctctttcttcatccaacttt 315  Q
    ||||||||| |||| ||||||||| ||| ||||| ||||||  |||||||||| | ||  || | ||| |||||||| ||   ||| ||||| |||||||    
T  34367456 ttttagtttcaaataggtcctttatgtcagtaaatgtgaacaggttagtcctttaattattttttttgtaacaaattcatacattttttcatacaacttt 34367357  T
Q  316 gttataaagtgctta-atgaccttttaacattgaggtggaaggtccaaaaagtgtttatgacaccaaacatgattacttacataca 400  Q
    |||| |||||||||| |||||  | ||| |||||||||||| ||||||||| ||||  ||| ||||||||| |||||||| |||||    
T  34367356 gttaaaaagtgcttacatgactatgtaaaattgaggtggaatgtccaaaaaatgtt--tgagaccaaacataattacttatataca 34367273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 219 - 400
Target Start/End: Original strand, 4248823 - 4249003
Alignment:
Q  219 ttttagttttaaattggtcctttaggtcg-taaaagtgaacgagttagtccttcatttttatcttgcaacaaattgatctctttcttcatccaactttgt 317  Q
    |||||||||||||||| || |||| |||| ||||||| ||| ||||||||||| | ||   | ||| ||||||||||||| ||| ||||| |||||||||    
T  4248823 ttttagttttaaattgatcttttatgtcggtaaaagtaaacaagttagtcctttaattaatttttgtaacaaattgatctattt-ttcatacaactttgt 4248921  T
Q  318 tataaag----tgctta-atgaccttttaacattgaggtggaaggtccaaaaagtgtttatgacaccaaacatgattacttacataca 400  Q
    || |||     |||||| |||||| ||||||| |||      | ||||||||||||||||||||||||||||| |||| ||| |||||    
T  4248922 taaaaaaacattgcttacatgaccatttaacactga------atgtccaaaaagtgtttatgacaccaaacataattatttatataca 4249003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 361 - 400
Target Start/End: Original strand, 17053557 - 17053596
Alignment:
Q  361 aaaaagtgtttatgacaccaaacatgattacttacataca 400  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  17053557 aaaaagtgtttatgacacaaaacatgattacttacataca 17053596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 338 - 396
Target Start/End: Complemental strand, 5552663 - 5552605
Alignment:
Q  338 tttaacattgaggtggaaggtccaaaaagtgtttatgacaccaaacatgattacttaca 396  Q
    |||||||||||||| | | ||| ||||||||||||||||| |||||||||||| |||||    
T  5552663 tttaacattgaggttgcatgtctaaaaagtgtttatgacaacaaacatgattaattaca 5552605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 287 - 397
Target Start/End: Complemental strand, 40138643 - 40138531
Alignment:
Q  287 caaattgatctctttcttcatccaactttgttataaa--gtg-cttaatgaccttttaacattgaggtggaaggtccaaaaagtgtttatgacaccaaac 383  Q
    |||||||||| |||| ||||| ||||||||||| |||  ||| || ||||| | ||||||||||||||||||| |  ||||| |||||||||||| ||||    
T  40138643 caaattgatc-cttttttcattcaactttgttaaaaaaagtgtctaaatgatcatttaacattgaggtggaagatttaaaaattgtttatgacacaaaac 40138545  T
Q  384 atgattacttacat 397  Q
    | |||||| |||||    
T  40138544 acgattacatacat 40138531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 415 - 471
Target Start/End: Complemental strand, 16773922 - 16773866
Alignment:
Q  415 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagacct 471  Q
    ||||||| |||||||||||||||||||||||| ||   |||||| ||||||||||||    
T  16773922 gaagaagctaaattagcccacctaaattggcatcagagagaatcgaacctgagacct 16773866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 415 - 471
Target Start/End: Complemental strand, 17155937 - 17155881
Alignment:
Q  415 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagacct 471  Q
    |||||||||||||||||||||  ||||||||| ||   |||||||||||||||||||    
T  17155937 gaagaagttaaattagcccactcaaattggcagcacagagaatcaaacctgagacct 17155881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 170 - 228
Target Start/End: Original strand, 34366815 - 34366873
Alignment:
Q  170 aaatgcatcctaggtttctttaagtttaacgtttgtatctgattagtccttttagtttt 228  Q
    ||||||||||| || | ||||||||| || ||||||| | |||||||||||||||||||    
T  34366815 aaatgcatcctggggtcctttaagttgaatgtttgtaccggattagtccttttagtttt 34366873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 338 - 391
Target Start/End: Complemental strand, 994942 - 994890
Alignment:
Q  338 tttaacattgaggtggaaggtccaaaaagtgtttatgacaccaaacatgattac 391  Q
    ||||||||||| |||| |||| ||||| |||||||||||| |||||||||||||    
T  994942 tttaacattgatgtggtaggttcaaaa-gtgtttatgacatcaaacatgattac 994890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 360 - 397
Target Start/End: Complemental strand, 8822541 - 8822504
Alignment:
Q  360 caaaaagtgtttatgacaccaaacatgattacttacat 397  Q
    |||||||||||||||||| ||||||| |||||||||||    
T  8822541 caaaaagtgtttatgacatcaaacataattacttacat 8822504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 416 - 449
Target Start/End: Original strand, 17877122 - 17877155
Alignment:
Q  416 aagaagttaaattagcccacctaaattggcacca 449  Q
    |||||||||||||||||||||||||||| |||||    
T  17877122 aagaagttaaattagcccacctaaattgacacca 17877155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 423 - 468
Target Start/End: Complemental strand, 24907596 - 24907551
Alignment:
Q  423 taaattagcccacctaaattggcaccaagcagaatcaaacctgaga 468  Q
    |||||||||||||||||||||||| |||| | |||| |||||||||    
T  24907596 taaattagcccacctaaattggcatcaaggataatcgaacctgaga 24907551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 188 - 228
Target Start/End: Complemental strand, 4249355 - 4249315
Alignment:
Q  188 tttaagtttaacgtttgtatctgattagtccttttagtttt 228  Q
    ||||||||||| ||||||||| ||||| |||||||||||||    
T  4249355 tttaagtttaaagtttgtatcagattaatccttttagtttt 4249315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 186 - 226
Target Start/End: Complemental strand, 10099862 - 10099822
Alignment:
Q  186 tctttaagtttaacgtttgtatctgattagtccttttagtt 226  Q
    |||||||||||||||||||||||  ||| ||||||||||||    
T  10099862 tctttaagtttaacgtttgtatcgaatttgtccttttagtt 10099822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 362 - 394
Target Start/End: Complemental strand, 16600612 - 16600580
Alignment:
Q  362 aaaagtgtttatgacaccaaacatgattactta 394  Q
    |||||||||||||||| ||||||||||||||||    
T  16600612 aaaagtgtttatgacatcaaacatgattactta 16600580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 415 - 471
Target Start/End: Original strand, 17028225 - 17028281
Alignment:
Q  415 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagacct 471  Q
    ||||||| ||||||||||||||||||||| ||| |    ||||||||||||||||||    
T  17028225 gaagaagctaaattagcccacctaaattgacactagagggaatcaaacctgagacct 17028281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 415 - 471
Target Start/End: Complemental strand, 35705101 - 35705045
Alignment:
Q  415 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagacct 471  Q
    ||||||| |||||||||||||| |||||| ||||  | |||||| ||||||||||||    
T  35705101 gaagaagctaaattagcccacccaaattgacaccggggagaatcgaacctgagacct 35705045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 81; Significance: 6e-38; HSPs: 19)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 219 - 398
Target Start/End: Complemental strand, 24755195 - 24755022
Alignment:
Q  219 ttttagttttaaattggtcctttaggtc-gtaaaagtgaacgagttagtccttcatttttatcttgcaacaaattgatctctttcttcatccaactttgt 317  Q
    ||||||||| |||||||||||||| ||| |||||||||||| |||||||||||        | ||| | ||||||| || |||| |||||||||||||||    
T  24755195 ttttagtttcaaattggtcctttatgtctgtaaaagtgaacaagttagtcctt--------ttttgtatcaaattggtcccttttttcatccaactttgt 24755104  T
Q  318 tataaagtgctta-atgaccttttaacattgaggtggaaggtccaaaaagtgtttatgacaccaaacatgattacttacata 398  Q
    || |||||||||| ||| || |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  24755103 taaaaagtgcttacatggccatttaacattgaggtagaaggtccaaaaagtgtttatgacaccaaacatgactacttacata 24755022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 298 - 382
Target Start/End: Complemental strand, 42669209 - 42669124
Alignment:
Q  298 ctttcttcatccaactttgttataaagtgctta-atgaccttttaacattgaggtggaaggtccaaaaagtgtttatgacaccaaa 382  Q
    |||| ||||||||||||||||  |||||||||| |||||| |||||| ||||||||||||||||||||||||||||||||||||||    
T  42669209 cttttttcatccaactttgttcaaaagtgcttacatgaccatttaacgttgaggtggaaggtccaaaaagtgtttatgacaccaaa 42669124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 303 - 394
Target Start/End: Original strand, 31165617 - 31165707
Alignment:
Q  303 ttcatccaactttgttataaagtgcttaatgaccttttaacattgaggtggaaggtccaaaaagtgtttatgacaccaaacatgattactta 394  Q
    |||||||||||| |||| || |||||||  |||| ||||||||| || ||| |||||| ||||||| |||||||| ||||||||||||||||    
T  31165617 ttcatccaacttcgttaaaacgtgcttatagaccatttaacattaagatggtaggtcc-aaaagtgcttatgacatcaaacatgattactta 31165707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 308 - 393
Target Start/End: Complemental strand, 15183959 - 15183875
Alignment:
Q  308 ccaactttgttataaagtgcttaatgaccttttaacattgaggtggaaggtccaaaaagtgtttatgacaccaaacatgattactt 393  Q
    ||||||| |||| ||||||||||  |||| ||||||||| || ||| |||||||||| ||| |||||||| |||||||||||||||    
T  15183959 ccaacttcgttaaaaagtgcttatagaccatttaacattaagatggtaggtccaaaa-gtgcttatgacatcaaacatgattactt 15183875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 309 - 397
Target Start/End: Complemental strand, 46798483 - 46798397
Alignment:
Q  309 caactttgttataaagtgcttaatgaccttttaacattgaggtggaaggtccaaaaagtgtttatgacaccaaacatgattacttacat 397  Q
    ||||||||||| ||||||||||   ||| |||||||||||| ||| || || ||||  ||||||||||| |||||||||||||||||||    
T  46798483 caactttgttagaaagtgcttatgaaccatttaacattgagttggtagttcaaaaa--tgtttatgacatcaaacatgattacttacat 46798397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 415 - 448
Target Start/End: Complemental strand, 1094640 - 1094607
Alignment:
Q  415 gaagaagttaaattagcccacctaaattggcacc 448  Q
    ||||||||||||||||||||||||||||||||||    
T  1094640 gaagaagttaaattagcccacctaaattggcacc 1094607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 331 - 400
Target Start/End: Complemental strand, 23532960 - 23532891
Alignment:
Q  331 atgaccttttaacattgaggtggaaggtccaaaaagtgtttatgacaccaaacatgattacttacataca 400  Q
    |||||| ||||| ||||||||| |   |||||||| || |||||||||||||||| ||||||||||||||    
T  23532960 atgaccatttaatattgaggtgaattatccaaaaaatgcttatgacaccaaacataattacttacataca 23532891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 331 - 391
Target Start/End: Original strand, 51062078 - 51062139
Alignment:
Q  331 atgaccttttaacattgaggtggaaggtccaaaaa-gtgtttatgacaccaaacatgattac 391  Q
    |||||| |||||||||||| || |||||||||||| || ||||||||| |||||||||||||    
T  51062078 atgaccatttaacattgagatgaaaggtccaaaaaggtatttatgacatcaaacatgattac 51062139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 415 - 471
Target Start/End: Original strand, 4280412 - 4280468
Alignment:
Q  415 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagacct 471  Q
    ||||||||||||||||| |||| ||||| ||||| |  |||||||||||||||||||    
T  4280412 gaagaagttaaattagctcacccaaattagcaccgaagagaatcaaacctgagacct 4280468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 303 - 398
Target Start/End: Original strand, 52650644 - 52650740
Alignment:
Q  303 ttcatccaactttgttataaagtgctta-atgaccttttaacattgaggtggaaggtccaaaaagtgtttatgacaccaaacatgattacttacata 398  Q
    ||||||||||||||||| ||||| |||| |||||  ||||||||||||||| || | ||  |||||||||||| | ||||| ||| ||| |||||||    
T  52650644 ttcatccaactttgttaaaaagtccttacatgactatttaacattgaggtgaaatgcccccaaagtgtttatggccccaaatatggttaattacata 52650740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 303 - 394
Target Start/End: Complemental strand, 35307341 - 35307251
Alignment:
Q  303 ttcatccaactttgttataaagtgcttaatgaccttttaacattgaggtggaaggtccaaaaagtgtttatgacaccaaacatgattactta 394  Q
    |||| ||||||| |||| |||||| |||  || | ||||||||| || ||| |||||||||| |||||| ||||| ||||||||||||||||    
T  35307341 ttcagccaacttcgttaaaaagtgtttatagatcatttaacattaagatggtaggtccaaaa-gtgtttttgacatcaaacatgattactta 35307251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 415 - 471
Target Start/End: Original strand, 21547441 - 21547497
Alignment:
Q  415 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagacct 471  Q
    |||||||||||| ||||||||||||||||||| ||   |||||| ||||||| ||||    
T  21547441 gaagaagttaaactagcccacctaaattggcatcagagagaatcgaacctgaaacct 21547497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 415 - 447
Target Start/End: Original strand, 24047063 - 24047095
Alignment:
Q  415 gaagaagttaaattagcccacctaaattggcac 447  Q
    |||||||||||||||||| ||||||||||||||    
T  24047063 gaagaagttaaattagccaacctaaattggcac 24047095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 423 - 471
Target Start/End: Complemental strand, 24730491 - 24730443
Alignment:
Q  423 taaattagcccacctaaattggcaccaagcagaatcaaacctgagacct 471  Q
    |||||||||||||| ||||||||||| || || |||||||||| |||||    
T  24730491 taaattagcccacccaaattggcaccgaggaggatcaaacctgggacct 24730443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 362 - 394
Target Start/End: Original strand, 27458299 - 27458331
Alignment:
Q  362 aaaagtgtttatgacaccaaacatgattactta 394  Q
    |||||||||||||||| ||||||||||||||||    
T  27458299 aaaagtgtttatgacatcaaacatgattactta 27458331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 416 - 468
Target Start/End: Original strand, 27476733 - 27476785
Alignment:
Q  416 aagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgaga 468  Q
    |||||| ||||||||||||||||||| |||||||   |||||||||| |||||    
T  27476733 aagaagctaaattagcccacctaaatcggcaccagagagaatcaaacttgaga 27476785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 415 - 471
Target Start/End: Complemental strand, 36124948 - 36124892
Alignment:
Q  415 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagacct 471  Q
    ||||||| ||||||||||||||||||||||| | | | || ||||||| ||||||||    
T  36124948 gaagaagctaaattagcccacctaaattggcgctaggaaggatcaaacttgagacct 36124892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 415 - 471
Target Start/End: Complemental strand, 44126510 - 44126454
Alignment:
Q  415 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagacct 471  Q
    ||||||| |||||||||| |||||||||||||| |   ||||||||| |||||||||    
T  44126510 gaagaagctaaattagcctacctaaattggcactagagagaatcaaatctgagacct 44126454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 341 - 400
Target Start/End: Complemental strand, 47763299 - 47763239
Alignment:
Q  341 aacattgagg-tggaaggtccaaaaagtgtttatgacaccaaacatgattacttacataca 400  Q
    |||||||||| ||||||||| |||  ||||||| |||||||| |||||||||||| |||||    
T  47763299 aacattgagggtggaaggtcgaaagtgtgtttacgacaccaatcatgattacttaaataca 47763239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 60; Significance: 2e-25; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 213 - 400
Target Start/End: Original strand, 11862106 - 11862297
Alignment:
Q  213 tagtccttttagttttaaattggtcctttaggtc-gtaaaagtgaacgagttagtccttcatttttatcttgc-aacaaattgatctctttcttcatcca 310  Q
    |||| |||||||||| |||||||||||||| ||| |||||||||||| | ||| ||||| ||| || | |||  ||||||||  |  |||| ||||||||    
T  11862106 tagttcttttagtttcaaattggtcctttatgtcagtaaaagtgaacaacttaatcctttattatttttttggtaacaaattagttccttttttcatcca 11862205  T
Q  311 actttgttataaagtgctta-atgaccttttaacattgaggtggaaggtccaaaaagtgtttatgaca-ccaaacatgattacttacataca 400  Q
    ||||  ||| |||||||| | || ||| |||||||||| |||||||||||||||||||||| |||| | |||||||||||||||||||||||    
T  11862206 acttccttaaaaagtgctcacataaccatttaacattggggtggaaggtccaaaaagtgttaatgatacccaaacatgattacttacataca 11862297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 309 - 382
Target Start/End: Complemental strand, 25319191 - 25319118
Alignment:
Q  309 caactttgttataaagtgctta-atgaccttttaacattgaggtggaaggtccaaaaagtgtttatgacaccaaa 382  Q
    ||||||||||| ||| || ||| |||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  25319191 caactttgttaaaaaatgattatatgaccatttaacattgaggtggaaggt-caaaaagtgtttatgacaccaaa 25319118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 303 - 381
Target Start/End: Original strand, 35436210 - 35436287
Alignment:
Q  303 ttcatccaactttgttataaagtgctta-atgaccttttaacattgaggtggaaggtccaaaaagtgtttatgacaccaa 381  Q
    ||||||||||||||||| ||| || ||| |||||| ||||||||| |||||||||||||||||  |||| ||||||||||    
T  35436210 ttcatccaactttgttaaaaaatgtttacatgaccatttaacattaaggtggaaggtccaaaa--tgttgatgacaccaa 35436287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 333 - 394
Target Start/End: Original strand, 83570 - 83630
Alignment:
Q  333 gaccttttaacattgaggtggaaggtccaaaaagtgtttatgacaccaaacatgattactta 394  Q
    |||| |||||||||||||||| |||||| ||||||||||||| || ||||||||||| ||||    
T  83570 gaccatttaacattgaggtggtaggtcc-aaaagtgtttatgtcatcaaacatgattgctta 83630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 419 - 471
Target Start/End: Complemental strand, 11251198 - 11251146
Alignment:
Q  419 aagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagacct 471  Q
    ||||||||||||| ||||||||||| |||||   |||||||||||||||||||    
T  11251198 aagttaaattagcacacctaaattgacaccagagagaatcaaacctgagacct 11251146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 360 - 391
Target Start/End: Complemental strand, 7889434 - 7889403
Alignment:
Q  360 caaaaagtgtttatgacaccaaacatgattac 391  Q
    ||||||||||||||||||||||||||||||||    
T  7889434 caaaaagtgtttatgacaccaaacatgattac 7889403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 415 - 446
Target Start/End: Complemental strand, 25637266 - 25637235
Alignment:
Q  415 gaagaagttaaattagcccacctaaattggca 446  Q
    ||||||||||||||||||||||||||||||||    
T  25637266 gaagaagttaaattagcccacctaaattggca 25637235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 396
Target Start/End: Original strand, 10019620 - 10019678
Alignment:
Q  338 tttaacattgaggtggaaggtccaaaaagtgtttatgacaccaaacatgattacttaca 396  Q
    |||||| ||||||||  | ||||||||||||||||| || ||||||||| |||||||||    
T  10019620 tttaactttgaggtgctaagtccaaaaagtgtttattactccaaacatggttacttaca 10019678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 321 - 394
Target Start/End: Original strand, 18077363 - 18077437
Alignment:
Q  321 aaagtgctta-atgaccttttaacattgaggtggaaggtccaaaaagtgtttatgacaccaaacatgattactta 394  Q
    |||||||||| |||||  ||||| |||||  |||||||||||||| || |||| |||||||||||||||| ||||    
T  18077363 aaagtgcttacatgacgatttaaaattgacatggaaggtccaaaacgtttttaagacaccaaacatgatttctta 18077437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 419 - 469
Target Start/End: Original strand, 29197341 - 29197391
Alignment:
Q  419 aagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagac 469  Q
    ||||||||||||||||||||||||||||||  | |||||| ||| ||||||    
T  29197341 aagttaaattagcccacctaaattggcaccgggaagaatcgaacatgagac 29197391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 338 - 395
Target Start/End: Original strand, 33428792 - 33428848
Alignment:
Q  338 tttaacattgaggtggaaggtccaaaaagtgtttatgacaccaaacatgattacttac 395  Q
    |||||||||||||||| | || ||||| |||||||||||| |||| ||||||||||||    
T  33428792 tttaacattgaggtggtatgttcaaaa-gtgtttatgacatcaaatatgattacttac 33428848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Complemental strand, 35716702 - 35716645
Alignment:
Q  339 ttaacattgaggtggaaggtccaaaaagtgtttatgacaccaaacatgattacttaca 396  Q
    ||||||||||| ||  | |||||||||||||||||||||  ||| |||||||||||||    
T  35716702 ttaacattgagatgacaagtccaaaaagtgtttatgacataaaaaatgattacttaca 35716645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 448
Target Start/End: Complemental strand, 41390338 - 41390305
Alignment:
Q  415 gaagaagttaaattagcccacctaaattggcacc 448  Q
    |||||||||||||||||||||| |||||||||||    
T  41390338 gaagaagttaaattagcccacccaaattggcacc 41390305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 338 - 394
Target Start/End: Original strand, 7401067 - 7401123
Alignment:
Q  338 tttaacattgaggtggaaggtccaaaaagtgtttatgacaccaaacatgattactta 394  Q
    |||||||||||| ||||| |||||||||||| ||||||| |  ||||| ||||||||    
T  7401067 tttaacattgagatggaaagtccaaaaagtggttatgaccctgaacataattactta 7401123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 415 - 471
Target Start/End: Original strand, 12517715 - 12517770
Alignment:
Q  415 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagacct 471  Q
    ||||||| |||||||||||||| || ||||||||| | |||||||||| ||||||||    
T  12517715 gaagaagctaaattagcccacccaa-ttggcaccagggagaatcaaacatgagacct 12517770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 415 - 471
Target Start/End: Complemental strand, 21213884 - 21213828
Alignment:
Q  415 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagacct 471  Q
    |||||||  ||| |||||||||||||||||||||  | |||||| ||||||||||||    
T  21213884 gaagaagcaaaactagcccacctaaattggcaccggggagaatcgaacctgagacct 21213828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 415 - 471
Target Start/End: Complemental strand, 37480190 - 37480134
Alignment:
Q  415 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagacct 471  Q
    ||||||| |||||||||||||| ||||||| |||  | |||||| ||||||||||||    
T  37480190 gaagaagctaaattagcccacccaaattgggaccggggagaatcgaacctgagacct 37480134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 417 - 469
Target Start/End: Complemental strand, 37972008 - 37971956
Alignment:
Q  417 agaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagac 469  Q
    ||||| ||||||||||||||||||||||||||    |||||| ||||||||||    
T  37972008 agaagctaaattagcccacctaaattggcaccggagagaatcgaacctgagac 37971956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 423 - 471
Target Start/End: Original strand, 42327364 - 42327412
Alignment:
Q  423 taaattagcccacctaaattggcaccaagcagaatcaaacctgagacct 471  Q
    |||||||||||||| ||||||||||| |  |||||| ||||||||||||    
T  42327364 taaattagcccacccaaattggcaccgaagagaatcgaacctgagacct 42327412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 415 - 471
Target Start/End: Complemental strand, 42602669 - 42602613
Alignment:
Q  415 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagacct 471  Q
    ||||||| |||||||||||||| |||||||||||    |||||||||||| ||||||    
T  42602669 gaagaagctaaattagcccacccaaattggcaccggagagaatcaaacctaagacct 42602613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 53; Significance: 3e-21; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 246 - 400
Target Start/End: Original strand, 4187205 - 4187360
Alignment:
Q  246 cgtaaaagtgaacgagttagtccttcatttttatctt-gcaacaaattgatctctttcttcatccaactttgttataaagtgctta-atgaccttttaac 343  Q
    ||||||||||||| |||| |||||| | ||| || || | || ||||||||   ||| |||||| |||||||||| ||| || ||| |||| | ||||||    
T  4187205 cgtaaaagtgaacaagttggtcctttagtttaatttttgtaataaattgattaattttttcatctaactttgttaaaaa-tgtttacatgatcatttaac 4187303  T
Q  344 attgaggtggaaggtccaaaaagtgtttatgacaccaaacatgattacttacataca 400  Q
    |||||||||||||||||||  ||||||||||||| ||||||||||||||||||||||    
T  4187304 attgaggtggaaggtccaattagtgtttatgacatcaaacatgattacttacataca 4187360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 303 - 396
Target Start/End: Original strand, 1228941 - 1229035
Alignment:
Q  303 ttcatccaactttgttataaagtgcttaa-tgaccttttaacattgaggtggaaggtccaaaaagtgtttatgacaccaaacatgattacttaca 396  Q
    ||||| ||||||||||| |||||| |||| ||||| |||||||||| ||| ||||||||||||||| ||||||| |||||||||||| |||||||    
T  1228941 ttcattcaactttgttaaaaagtgtttaaatgaccatttaacattgcggtagaaggtccaaaaagtatttatgataccaaacatgatcacttaca 1229035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 309 - 393
Target Start/End: Complemental strand, 9550777 - 9550693
Alignment:
Q  309 caactttgttataaagtgctta-atgaccttttaacattgaggtggaaggtccaaaaagtgtttatgacaccaaacatgattactt 393  Q
    ||||||||||| |||||| ||| |||||| |||||||||||||||||||||  ||||| | ||||||||||||||||| |||||||    
T  9550777 caactttgttaaaaagtgattatatgaccatttaacattgaggtggaaggt-taaaaaatatttatgacaccaaacataattactt 9550693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 288 - 394
Target Start/End: Complemental strand, 35749165 - 35749059
Alignment:
Q  288 aaattgatctctttcttcatccaactttgttataaagtgctta-atgaccttttaacattgaggtggaaggtccaaaaagtgtttatgacaccaaacatg 386  Q
    ||||||||| |||| |||||||||||||| || |||||||||| |||| | ||||||||||| ||  || || |||| ||||||||||| ||||||||||    
T  35749165 aaattgatc-cttttttcatccaactttggtaaaaagtgcttacatgatcatttaacattgatgtcaaaagttcaaagagtgtttatgataccaaacatg 35749067  T
Q  387 attactta 394  Q
    ||| ||||    
T  35749066 atttctta 35749059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 415 - 471
Target Start/End: Complemental strand, 16852455 - 16852399
Alignment:
Q  415 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagacct 471  Q
    ||||||| |||| |||||||||||||||||||| ||| |||||| ||||||||||||    
T  16852455 gaagaagctaaaatagcccacctaaattggcactaaggagaatcgaacctgagacct 16852399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 291 - 367
Target Start/End: Original strand, 28451913 - 28451990
Alignment:
Q  291 ttgatctctttcttcatccaactttgttataaagtgctta-atgaccttttaacattgaggtggaaggtccaaaaagt 367  Q
    ||||||| ||| ||||| |||||||||||||||||||||| |||||  |||||| ||| |||||||| | ||||||||    
T  28451913 ttgatctgttttttcatacaactttgttataaagtgcttatatgactatttaaccttgtggtggaagattcaaaaagt 28451990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 341 - 394
Target Start/End: Complemental strand, 29029168 - 29029115
Alignment:
Q  341 aacattgaggtggaaggtccaaaaagtgtttatgacaccaaacatgattactta 394  Q
    |||||| |||||||||||||||||| | ||||| |||| |||||||||||||||    
T  29029168 aacattaaggtggaaggtccaaaaaatatttataacacaaaacatgattactta 29029115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 415 - 471
Target Start/End: Complemental strand, 28783175 - 28783119
Alignment:
Q  415 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagacct 471  Q
    ||||||| |||||||||||||| ||||||||||| || |||||| ||| ||||||||    
T  28783175 gaagaagctaaattagcccacccaaattggcaccgaggagaatcgaacatgagacct 28783119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 423 - 471
Target Start/End: Original strand, 29858018 - 29858066
Alignment:
Q  423 taaattagcccacctaaattggcaccaagcagaatcaaacctgagacct 471  Q
    |||||||||||||||||||||||||| ||  ||||| ||||||||||||    
T  29858018 taaattagcccacctaaattggcaccgaggggaatcgaacctgagacct 29858066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 415 - 471
Target Start/End: Complemental strand, 31088788 - 31088732
Alignment:
Q  415 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagacct 471  Q
    |||||||||||||||||| ||||||||||| | ||   |||||||||||||||||||    
T  31088788 gaagaagttaaattagcctacctaaattggtatcagagagaatcaaacctgagacct 31088732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 448
Target Start/End: Complemental strand, 8485114 - 8485081
Alignment:
Q  415 gaagaagttaaattagcccacctaaattggcacc 448  Q
    ||||||| ||||||||||||||||||||||||||    
T  8485114 gaagaagctaaattagcccacctaaattggcacc 8485081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 321 - 394
Target Start/End: Original strand, 32350818 - 32350890
Alignment:
Q  321 aaagtgcttaatgaccttttaacattgaggtggaaggtccaaaaagtgtttatgacaccaaacatgattactta 394  Q
    ||||||||||  |||| ||||||||| || ||  ||||| |||| |||||||||||| ||||||||||||||||    
T  32350818 aaagtgcttatagaccatttaacattaagatgataggtctaaaa-gtgtttatgacatcaaacatgattactta 32350890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 321 - 394
Target Start/End: Original strand, 32367479 - 32367551
Alignment:
Q  321 aaagtgcttaatgaccttttaacattgaggtggaaggtccaaaaagtgtttatgacaccaaacatgattactta 394  Q
    ||||||||||  |||| ||||||||| || ||  ||||| |||| |||||||||||| ||||||||||||||||    
T  32367479 aaagtgcttatagaccatttaacattaagatgataggtctaaaa-gtgtttatgacatcaaacatgattactta 32367551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 417 - 449
Target Start/End: Original strand, 3305151 - 3305183
Alignment:
Q  417 agaagttaaattagcccacctaaattggcacca 449  Q
    ||||| |||||||||||||||||||||||||||    
T  3305151 agaagataaattagcccacctaaattggcacca 3305183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 415 - 471
Target Start/End: Complemental strand, 6536635 - 6536579
Alignment:
Q  415 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagacct 471  Q
    ||||||| ||||||| |||||||||||||||||||   |||||  ||||||||||||    
T  6536635 gaagaagctaaattaacccacctaaattggcaccagagagaattgaacctgagacct 6536579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 415 - 471
Target Start/End: Original strand, 11793482 - 11793538
Alignment:
Q  415 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagacct 471  Q
    ||||||| |||| ||||||||| |||||||||||  | |||||||||||| ||||||    
T  11793482 gaagaagctaaactagcccacccaaattggcaccgggaagaatcaaacctaagacct 11793538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 419 - 471
Target Start/End: Original strand, 19703452 - 19703504
Alignment:
Q  419 aagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagacct 471  Q
    ||||||||||||||||||| ||||| ||| | | |||||| ||||||||||||    
T  19703452 aagttaaattagcccaccttaattgacactagggagaatcgaacctgagacct 19703504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 338 - 394
Target Start/End: Original strand, 26600870 - 26600925
Alignment:
Q  338 tttaacattgaggtggaaggtccaaaaagtgtttatgacaccaaacatgattactta 394  Q
    ||||||||| || ||| |||||||||| ||| |||||||| ||||||||||||||||    
T  26600870 tttaacattaagatggtaggtccaaaa-gtgcttatgacatcaaacatgattactta 26600925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 416 - 448
Target Start/End: Complemental strand, 40872990 - 40872958
Alignment:
Q  416 aagaagttaaattagcccacctaaattggcacc 448  Q
    ||||||||||| |||||||||||||||||||||    
T  40872990 aagaagttaaactagcccacctaaattggcacc 40872958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 1e-17; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 321 - 394
Target Start/End: Complemental strand, 18130673 - 18130600
Alignment:
Q  321 aaagtgctta-atgaccttttaacattgaggtggaaggtccaaaaagtgtttatgacaccaaacatgattactta 394  Q
    |||||||||| ||||||| ||||||||||||||| || ||||||||||| |||||||||||||||||||||||||    
T  18130673 aaagtgcttacatgacctcttaacattgaggtggtag-tccaaaaagtgcttatgacaccaaacatgattactta 18130600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 321 - 395
Target Start/End: Complemental strand, 23888338 - 23888264
Alignment:
Q  321 aaagtgctta-atgaccttttaacattgaggtggaaggtccaaaaagtgtttatgacaccaaacatgattacttac 395  Q
    |||||||||| ||||||| ||||||||||||||  || ||||||||||| ||||||||||||||||||||||||||    
T  23888338 aaagtgcttacatgacctcttaacattgaggtgctag-tccaaaaagtgcttatgacaccaaacatgattacttac 23888264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 303 - 394
Target Start/End: Original strand, 11751788 - 11751878
Alignment:
Q  303 ttcatccaactttgttataaagtgcttaatgaccttttaacattgaggtggaaggtccaaaaagtgtttatgacaccaaacatgattactta 394  Q
    |||| ||||||| |||| |||||| |||  |||| ||||||||| || ||| |||||||||| |||||||||||| |||||| |||||||||    
T  11751788 ttcagccaacttcgttaaaaagtgtttatagaccatttaacattaagatggtaggtccaaaa-gtgtttatgacatcaaacacgattactta 11751878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 416 - 471
Target Start/End: Complemental strand, 13441171 - 13441116
Alignment:
Q  416 aagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagacct 471  Q
    |||||||||||||||||||| |||||||||||  || |||||| ||| ||||||||    
T  13441171 aagaagttaaattagcccacttaaattggcactgagaagaatcgaacttgagacct 13441116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 415 - 446
Target Start/End: Original strand, 24641151 - 24641182
Alignment:
Q  415 gaagaagttaaattagcccacctaaattggca 446  Q
    ||||||||||||||||||||||||||||||||    
T  24641151 gaagaagttaaattagcccacctaaattggca 24641182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 415 - 447
Target Start/End: Complemental strand, 18263955 - 18263923
Alignment:
Q  415 gaagaagttaaattagcccacctaaattggcac 447  Q
    ||||||| |||||||||||||||||||||||||    
T  18263955 gaagaagctaaattagcccacctaaattggcac 18263923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 47; Significance: 1e-17; HSPs: 12)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 225 - 396
Target Start/End: Complemental strand, 10856473 - 10856309
Alignment:
Q  225 ttttaaattggtcctttaggtc-gtaaaagtgaacgagttagtccttcatttttatcttgcaacaaattgatctctttcttcatccaactttgttataaa 323  Q
    ||||||||||||| |||  ||| |||||||| ||| ||||||||||| | |||||| ||| | ||||| |||| |||| |||||||||||| |||| |||    
T  10856473 ttttaaattggtcttttgtgtcagtaaaagtaaacaagttagtcctttaattttatattgaatcaaatggatcccttttttcatccaacttcgttaaaaa 10856374  T
Q  324 gtgcttaatgaccttttaacattgaggtggaaggtccaaaaagtgtttatgacaccaaacatgattacttaca 396  Q
           | |||| |||||||||||| ||||||||||||||| | |||||||| |||||||||| ||||||||    
T  10856373 -------acgaccatttaacattgag-tggaaggtccaaaaactatttatgaccccaaacatgaatacttaca 10856309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 338 - 400
Target Start/End: Complemental strand, 17549939 - 17549876
Alignment:
Q  338 tttaacattgaggtggaaggtccaaa-aagtgtttatgacaccaaacatgattacttacataca 400  Q
    |||||| | ||||||||||||||||| |||| ||||||||||||||| ||||||||||||||||    
T  17549939 tttaacttagaggtggaaggtccaaagaagtttttatgacaccaaacgtgattacttacataca 17549876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 338 - 400
Target Start/End: Complemental strand, 29491152 - 29491090
Alignment:
Q  338 tttaacattgaggtggaaggtccaaaaagtgtttatgacaccaaacatgattacttacataca 400  Q
    ||||||||||| |||||| || ||||||||| ||| |||||||||| ||||||||||||||||    
T  29491152 tttaacattgaagtggaatgtacaaaaagtggttacgacaccaaacgtgattacttacataca 29491090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 331 - 389
Target Start/End: Original strand, 30676359 - 30676417
Alignment:
Q  331 atgaccttttaacattgaggtggaaggtccaaaaagtgtttatgacaccaaacatgatt 389  Q
    |||||| || |||||||| ||||||||| |||||||||||||||||| |||||| ||||    
T  30676359 atgaccattaaacattgaagtggaaggttcaaaaagtgtttatgacaacaaacacgatt 30676417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 415 - 471
Target Start/End: Original strand, 8853760 - 8853816
Alignment:
Q  415 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagacct 471  Q
    ||||||||||||||| |||||| |||||||||||||| || ||| ||| ||||||||    
T  8853760 gaagaagttaaattaacccacccaaattggcaccaaggaggatcgaacatgagacct 8853816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 415 - 471
Target Start/End: Complemental strand, 44069873 - 44069817
Alignment:
Q  415 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagacct 471  Q
    ||||||| |||| |||||||||||||||||||||    |||||||||||||||||||    
T  44069873 gaagaagctaaactagcccacctaaattggcaccggaaagaatcaaacctgagacct 44069817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 415 - 471
Target Start/End: Original strand, 52769944 - 52770000
Alignment:
Q  415 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagacct 471  Q
    ||||||| ||||||||||||||||||||| ||| ||  |||||| ||||||||||||    
T  52769944 gaagaagctaaattagcccacctaaattgacactaaagagaatcgaacctgagacct 52770000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 415 - 471
Target Start/End: Complemental strand, 54990817 - 54990761
Alignment:
Q  415 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagacct 471  Q
    ||||||| ||||||||||||||||||||| || | || |||||| ||||||||||||    
T  54990817 gaagaagctaaattagcccacctaaattgccatcgaggagaatcgaacctgagacct 54990761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 400
Target Start/End: Complemental strand, 20524620 - 20524581
Alignment:
Q  361 aaaaagtgtttatgacaccaaacatgattacttacataca 400  Q
    ||||||||||||||||||  ||||||||||||||||||||    
T  20524620 aaaaagtgtttatgacacataacatgattacttacataca 20524581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 415 - 469
Target Start/End: Complemental strand, 14339725 - 14339671
Alignment:
Q  415 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagac 469  Q
    ||||||| ||||||||||||||| ||||||||| | | |||||| ||||||||||    
T  14339725 gaagaagctaaattagcccaccttaattggcactagggagaatcgaacctgagac 14339671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 281 - 390
Target Start/End: Original strand, 49292115 - 49292224
Alignment:
Q  281 ttgcaacaaattgatctctttcttcatccaactttgttataaagtgcttaatgac-cttttaacattgaggtggaaggtccaaaaagtgtttatgacacc 379  Q
    ||||||||| |||||| |||| ||| || |||||||||  |||||||||||  |  | |||||||||||||| ||||||| |||||  |||||| |||||    
T  49292115 ttgcaacaagttgatc-cttttttcttctaactttgttgaaaagtgcttaagcaatcatttaacattgaggtagaaggtctaaaaaccgtttataacacc 49292213  T
Q  380 aaacatgatta 390  Q
    |||||| ||||    
T  49292214 aaacataatta 49292224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 333 - 400
Target Start/End: Original strand, 33282675 - 33282739
Alignment:
Q  333 gaccttttaacattgaggtggaaggtccaaaaagtgtttatgacaccaaacatgattacttacataca 400  Q
    |||| ||| |||||||||||| |||||| |||   || ||||||| ||||||||||||||||||||||    
T  33282675 gaccatttgacattgaggtggtaggtccgaaa---gtatatgacatcaaacatgattacttacataca 33282739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 14)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 168 - 242
Target Start/End: Complemental strand, 25576370 - 25576296
Alignment:
Q  168 ccaaatgcatcctaggtttctttaagtttaacgtttgtatctgattagtccttttagttttaaattggtccttta 242  Q
    |||| |||||||| || | |||||||||||||||||||| | |||||||| ||||||||| ||||| ||||||||    
T  25576370 ccaattgcatcctggggtcctttaagtttaacgtttgtaccggattagtcgttttagtttcaaattagtccttta 25576296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 415 - 471
Target Start/End: Complemental strand, 41487474 - 41487418
Alignment:
Q  415 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagacct 471  Q
    ||||||| ||||||||||||||||||||||||||  | |||||| ||||||||||||    
T  41487474 gaagaagctaaattagcccacctaaattggcaccgggaagaatcgaacctgagacct 41487418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 357 - 400
Target Start/End: Original strand, 30738482 - 30738525
Alignment:
Q  357 gtccaaaaagtgtttatgacaccaaacatgattacttacataca 400  Q
    |||||||||||||| || ||||||||||||||||||||||||||    
T  30738482 gtccaaaaagtgttcattacaccaaacatgattacttacataca 30738525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 285 - 400
Target Start/End: Original strand, 43230753 - 43230863
Alignment:
Q  285 aacaaattgatctctttcttcatccaactttgttataaagtgctta-atgaccttttaacattgaggtggaaggtccaaaaagtgtttatgacaccaaac 383  Q
    |||||||||||| ||||  ||||| |||||||||| ||| |||||| | |||| ||||| ||||||||| | | |||||||||||||||||||| |||||    
T  43230753 aacaaattgatcccttt--tcatctaactttgttaaaaa-tgcttacaagaccatttaatattgaggtgaaggatccaaaaagtgtttatgacatcaaac 43230849  T
Q  384 atgattacttacataca 400  Q
       ||||||||||||||    
T  43230850 ---attacttacataca 43230863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 361 - 395
Target Start/End: Original strand, 33763127 - 33763161
Alignment:
Q  361 aaaaagtgtttatgacaccaaacatgattacttac 395  Q
    |||||||||||||||||||||||||||||||||||    
T  33763127 aaaaagtgtttatgacaccaaacatgattacttac 33763161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 415 - 471
Target Start/End: Complemental strand, 21558243 - 21558187
Alignment:
Q  415 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagacct 471  Q
    ||||||| ||||||| |||||||||||||||||||   |||||| ||||||||||||    
T  21558243 gaagaagctaaattaacccacctaaattggcaccagagagaatcgaacctgagacct 21558187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 416 - 468
Target Start/End: Original strand, 22932674 - 22932725
Alignment:
Q  416 aagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgaga 468  Q
    |||||| |||||||||||||||||||||||||| || ||| ||||||||||||    
T  22932674 aagaagctaaattagcccacctaaattggcaccgag-agattcaaacctgaga 22932725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 415 - 471
Target Start/End: Original strand, 29385704 - 29385760
Alignment:
Q  415 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagacct 471  Q
    |||||||  ||| ||||||||| |||||||||||||  |||||||||||||||||||    
T  29385704 gaagaagcaaaagtagcccacccaaattggcaccaaagagaatcaaacctgagacct 29385760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 415 - 471
Target Start/End: Complemental strand, 30579450 - 30579394
Alignment:
Q  415 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagacct 471  Q
    ||||||| |||||||||||||||||||||||||||   | |||| ||||||||||||    
T  30579450 gaagaagctaaattagcccacctaaattggcaccagagaaaatcgaacctgagacct 30579394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 415 - 469
Target Start/End: Complemental strand, 43591022 - 43590968
Alignment:
Q  415 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagac 469  Q
    ||||||| ||||||||||||||| ||||||||| | | |||||| ||||||||||    
T  43591022 gaagaagctaaattagcccaccttaattggcactagggagaatcgaacctgagac 43590968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 341 - 394
Target Start/End: Complemental strand, 30053986 - 30053934
Alignment:
Q  341 aacattgaggtggaaggtccaaaaagtgtttatgacaccaaacatgattactta 394  Q
    ||||||||||||||||||| ||| | | ||||||||||||||||| ||||||||    
T  30053986 aacattgaggtggaaggtc-aaacactatttatgacaccaaacataattactta 30053934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 309 - 394
Target Start/End: Original strand, 33407136 - 33407220
Alignment:
Q  309 caactttgttataaagtgcttaatgaccttttaacattgaggtggaaggtccaaaaagtgtttatgacaccaaacatgattactta 394  Q
    ||||||||||| ||| ||||||  |||| ||||||||||| | |  |||| ||||| | |||||||||| ||||||||||||||||    
T  33407136 caactttgttaaaaattgcttatggaccatttaacattgatgcgttaggttcaaaagg-gtttatgacatcaaacatgattactta 33407220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 333 - 394
Target Start/End: Original strand, 34595923 - 34595983
Alignment:
Q  333 gaccttttaacattgaggtggaaggtccaaaaagtgtttatgacaccaaacatgattactta 394  Q
    |||| ||||||||| || ||| |||||||||| |||||||||||| |||| |||||||||||    
T  34595923 gaccatttaacattaagatggtaggtccaaaa-gtgtttatgacatcaaatatgattactta 34595983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 247 - 319
Target Start/End: Original strand, 25576135 - 25576207
Alignment:
Q  247 gtaaaagtgaacgagttagtccttcatttttatcttgcaacaaattgatctctttcttcatccaactttgtta 319  Q
    |||||||||||| |||| |||||| | || | | ||| |||||||||||| |||| ||||| |||||||||||    
T  25576135 gtaaaagtgaacaagttggtcctttaattattttttgtaacaaattgatcccttttttcatacaactttgtta 25576207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 303 - 394
Target Start/End: Original strand, 508077 - 508167
Alignment:
Q  303 ttcatccaactttgttataaagtgcttaatgaccttttaacattgaggtggaaggtccaaaaagtgtttatgacaccaaacatgattactta 394  Q
    |||| ||||||| |||| |||||| |||  |||| |||||| || || ||| ||||||||||| ||||||||||| ||||||||||||||||    
T  508077 ttcagccaacttcgttaaaaagtgtttatagaccatttaacgttaagatggtaggtccaaaaa-tgtttatgacatcaaacatgattactta 508167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 338 - 396
Target Start/End: Complemental strand, 39396 - 39338
Alignment:
Q  338 tttaacattgaggtggaaggtccaaaaagtgtttatgacaccaaacatgattacttaca 396  Q
    |||||| ||||||||| ||||| |||||||| |||| ||||||||||||||| ||||||    
T  39396 tttaacgttgaggtggcaggtcgaaaaagtgcttataacaccaaacatgattgcttaca 39338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 416 - 471
Target Start/End: Original strand, 15739 - 15794
Alignment:
Q  416 aagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagacct 471  Q
    |||||| |||||||||||||| |||||||||||  | |||||||||| ||||||||    
T  15739 aagaagctaaattagcccacccaaattggcaccgcggagaatcaaacttgagacct 15794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 415 - 449
Target Start/End: Original strand, 42625 - 42659
Alignment:
Q  415 gaagaagttaaattagcccacctaaattggcacca 449  Q
    ||||||||||||||||||||||||||||| |||||    
T  42625 gaagaagttaaattagcccacctaaattgacacca 42659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 471
Target Start/End: Original strand, 15284 - 15340
Alignment:
Q  415 gaagaagttaaattagcccacctaaattggca-ccaagcagaatcaaacctgagacct 471  Q
    ||||||| |||||||||||||||||||||||| || || |||||| ||||||||||||    
T  15284 gaagaagctaaattagcccacctaaattggcatccgag-agaatcgaacctgagacct 15340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University