View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15941_high_69 (Length: 378)
Name: NF15941_high_69
Description: NF15941
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15941_high_69 |
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| [»] scaffold0790 (1 HSPs) |
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Alignment Details
Target: scaffold0790 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0790
Description:
Target: scaffold0790; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 203 - 291
Target Start/End: Original strand, 2871 - 2961
Alignment:
| Q |
203 |
gaagaggaagaggataagag--aaacaaataaagcagtgaagaataagggttgtttcattgtgcagagagaccaacagcgccacactaatt |
291 |
Q |
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| T |
2871 |
gaagaggaaaatgataagaggaaaaaaaataaagcagtgaagaataagggttgtttcattgtgcagagagaccgacaccgccacactaatt |
2961 |
T |
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