View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15941_low_136 (Length: 288)
Name: NF15941_low_136
Description: NF15941
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15941_low_136 |
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Alignment Details
Target: chr2 (Bit Score: 253; Significance: 1e-141; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 253; E-Value: 1e-141
Query Start/End: Original strand, 1 - 282
Target Start/End: Original strand, 13556440 - 13556721
Alignment:
| Q |
1 |
acactacctgagatatatattctttgaccttgttattgatgggtccatctgaagctctctcagcaagctcataatatatgatattgccttcaggaccatg |
100 |
Q |
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| T |
13556440 |
acactacctgagatatatattctttgaccttgttatttatgggtccatctgaagctctctcagcaagctcataatatatgatattgccttcaggaccatg |
13556539 |
T |
|
| Q |
101 |
aactttgtccttctgtaaatacctacacagcaaaagatgaattatgaattacttcaatgttcattgnnnnnnnagggaaactatgtgtgtcacagaatgc |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| |
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| T |
13556540 |
aactttgtccttctgtaaatacctacacagcaaaagatgaattatgaataacttcaatgttcattgtttttttagggaaactatgtgtgtcacagaatgc |
13556639 |
T |
|
| Q |
201 |
aatgaatcttgtaatttaatttcacctttgctgaacaagaagttccaatgtttgtttaatgtttccaaggataggatgatgt |
282 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
13556640 |
aatgaatcttgtaatttaatttcacctttgctgaacaagaagttccaatgtttgtttaatgtttccaaggataggatgatgt |
13556721 |
T |
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