View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15941_low_168 (Length: 256)
Name: NF15941_low_168
Description: NF15941
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15941_low_168 |
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Alignment Details
Target: chr4 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 18 - 251
Target Start/End: Complemental strand, 36922435 - 36922202
Alignment:
| Q |
18 |
tttcctacagccacctgcatatgttattattcgaatagttgcagctttacatatattgacattcttttaaactgtgtatttaaaatgtaaaaataatgaa |
117 |
Q |
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| T |
36922435 |
tttcctacagccacctgcatatgttattattcgaatagttgcagctttacatatattgacattcttttaaactgtgtatttaaaatgtaaaaataatgaa |
36922336 |
T |
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| Q |
118 |
aaaccacaatgagcactttagtcgttacaaagaaaaattcagaaccagcctacttttcaagaaagctcaaaacctacttccaaatgaataaatggatact |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36922335 |
aaaccacaatgagcactttagtcgttacaaagaaaaattcagaaccagcctacttttcaagaaagctcaaaacctacttccaaatgaataaatggatact |
36922236 |
T |
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| Q |
218 |
tttaaatacaatcaaacaagtgatcatgtactat |
251 |
Q |
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|| ||||||||||||||||||||||||||||||| |
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| T |
36922235 |
ttaaaatacaatcaaacaagtgatcatgtactat |
36922202 |
T |
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