View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15941_low_207 (Length: 230)
Name: NF15941_low_207
Description: NF15941
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15941_low_207 |
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Alignment Details
Target: chr8 (Bit Score: 193; Significance: 1e-105; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 3426456 - 3426676
Alignment:
| Q |
1 |
aagaattcactttgaatacatgtcaaaagaagatcatcttcatagaacaaaagaaagacattgttgttgtaaatgaataatgagcaaaagaataagcata |
100 |
Q |
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| T |
3426456 |
aagaattcactttgaatacatgtcaaaagaagatcatcttcatagaacaaaagaaagacattgttgttgtaaatgaataatgagcaaaagaataagcata |
3426555 |
T |
|
| Q |
101 |
acatgagcaaattgtacaggttaaagattcaatacaattcaggtatcaatttcgatttgacttagttgttaattcgaattttagtaaactcaaaagtgaa |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||| ||||||| |||| || ||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3426556 |
acatgagcaaattgtacaggttaaagattcaatacaatttaggtatcgctttcaatatgacttagttgttaattcgaattttagtaaactcaaaagtgaa |
3426655 |
T |
|
| Q |
201 |
accgactttatattcttggac |
221 |
Q |
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|||||||||| ||| |||||| |
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| T |
3426656 |
accgactttacattgttggac |
3426676 |
T |
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