View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15941_low_208 (Length: 230)
Name: NF15941_low_208
Description: NF15941
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15941_low_208 |
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Alignment Details
Target: chr2 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 2118444 - 2118655
Alignment:
| Q |
1 |
atggtgaaaaataaatttcatgccaaatcctagatggatccatacaaccaataggtaactgtctccacatcacgaataacccgacaaagggaaaagctta |
100 |
Q |
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| T |
2118444 |
atggtgaaaaataaatttcatgccaaatcctagatggatccttacaaccaataggtaactgtctccacatcacgaataacccgacaaagggaatagctta |
2118543 |
T |
|
| Q |
101 |
agtcgaatatgtgccttctctaacagaattttccacgaaaaagaaacaaccttagtcggagctgaactcatccacacctttgaaagattttggagttgtt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2118544 |
agtcgaatatgtgccttctctaacagaattttccacgaaaaagaaacaaccttagtcggagctgaactcatccacacctttgaaagattttggagttgtt |
2118643 |
T |
|
| Q |
201 |
gcctcgacaaac |
212 |
Q |
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|||||||||||| |
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| T |
2118644 |
gcctcgacaaac |
2118655 |
T |
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