View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15941_low_58 (Length: 414)
Name: NF15941_low_58
Description: NF15941
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15941_low_58 |
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Alignment Details
Target: chr2 (Bit Score: 373; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 373; E-Value: 0
Query Start/End: Original strand, 10 - 398
Target Start/End: Complemental strand, 4094302 - 4093914
Alignment:
| Q |
10 |
attattctgatggaaactaaaagtggaacctagttgatgtacacatgcaagagttgtcttaactcttcttaaccttgcaatttttagacaaaatcacaca |
109 |
Q |
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| T |
4094302 |
attactctgatggaaactaaaagtggaacctagttgatgtacacatgcaagagttgtcttaactcttcttaaccttgcaatttttagacaaagtcacaca |
4094203 |
T |
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| Q |
110 |
aaatatcttaccaacttgatccatattatggacactcttgttgtgattaaggcgctgattctttatccacatacatacatatttattgaaattgttaatg |
209 |
Q |
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| T |
4094202 |
aaatatcttaccaacttgatccatattatggacactcttgttgtgattaaggtgctgattctttatccacctacatacatatttattgaaattgttaatg |
4094103 |
T |
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| Q |
210 |
tattgcttaaaacaattactgtcatgtcttctcagaatgatgaaatggttattggatggccacttggtcttagcttcttgaatatcagacttagagttgt |
309 |
Q |
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| T |
4094102 |
tattgcttaaaacaattactgtcatgtcttctcagaatgatgaaatggttattggatggccacttggtcttagcttcttgaatatcagacttagagttgt |
4094003 |
T |
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| Q |
310 |
ggaagcttcttcaatgaaaccatatcaattgcacatgccatccactagtttctcttcattttcaacctctaaccttgatactgaggtgt |
398 |
Q |
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| T |
4094002 |
ggaagcttcttcaatgaaaccatatcaattgcacatgccatccactagtttctcttcattttcaacctctaaccttgatactgaggtgt |
4093914 |
T |
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