View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF15941_low_90 (Length: 342)
Name: NF15941_low_90
Description: NF15941
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15941_low_90 |
 |  |
|
Alignment Details
Target: chr1 (Bit Score: 275; Significance: 1e-154; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 275; E-Value: 1e-154
Query Start/End: Original strand, 14 - 325
Target Start/End: Original strand, 15594081 - 15594392
Alignment:
| Q |
14 |
ttcttatcaagcaaatttgcagccactgtaattgcaccatttatctttgtaacttctttagaagagagttttaatttgacatccttattcttcagagcat |
113 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15594081 |
ttcttatcaagcaaatttgtagccactgtaattgcaccattgatctttgtaacttctttagaagagagttttaatttgacatccttattcttcagagcat |
15594180 |
T |
 |
| Q |
114 |
ttctcaacttgtaaacacagtcatctaatgcattcattacctccgccttccttaggaatttctcatcttcagcacgatattcctcggcttcttgaatcan |
213 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15594181 |
ttctcaacttgtaaacacagtcatctaatgcattcattacctccgccttccttaggaatttctcatcttcagcacgatattcctcggcttcttgaatcat |
15594280 |
T |
 |
| Q |
214 |
nnnnnnaatttcatatgctgacaacctttctttgtcattggttattgtgatctcgtttgtattgccagtggatgtttccttcacagaaacagtcatgata |
313 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
15594281 |
ttttttaatttcatatgctgacaacctttctttgtcattggttattgtgatctcgtttgtattgccagtggatgtttccttcacagaaacagtcaggata |
15594380 |
T |
 |
| Q |
314 |
ccattttcatcg |
325 |
Q |
| |
|
||||||||||| |
|
|
| T |
15594381 |
gcattttcatcg |
15594392 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 276
Target Start/End: Complemental strand, 4679679 - 4679414
Alignment:
| Q |
11 |
ttattcttatcaagcaaatttgcagccactgtaattgcaccatttatctttgtaacttctttagaagagagttttaatttgacatccttattcttcagag |
110 |
Q |
| |
|
||||||||||||||||| || | ||||||||||||||| | || |||||| | ||| | | ||||||| ||||| || |||||||| ||||| | || |
|
|
| T |
4679679 |
ttattcttatcaagcaagttggtggccactgtaattgcatcgttgatcttttcactttcatcacaagagagctttaaattaacatccttcttctttaaag |
4679580 |
T |
 |
| Q |
111 |
catttctcaacttgtaaacacagtcatctaatgcattcattacctccgccttccttaggaatttctcatcttcagcacgatattcctcggcttcttgaat |
210 |
Q |
| |
|
|||| | | ||||||||||| || |||||| ||||||||| |||||||||| ||||||| |||||| | ||||||| ||| ||||||| ||| |
|
|
| T |
4679579 |
cattcttgatattgtaaacacaaaattccaatgcactcattaccttagccttccttaaaaatttcttatcttcctcgcgatatttctcagcttcttcaat |
4679480 |
T |
 |
| Q |
211 |
cannnnnnnaatttcatatgctgacaacctttctttgtcattggttattgtgatctcgtttgtatt |
276 |
Q |
| |
|
|| || || | ||| || |||||||||||| ||||||||||| ||||||| ||| ||||| |
|
|
| T |
4679479 |
cagttttttaacttgaaatgttgtcaacctttctttttcattggttatggtgatcttgttcgtatt |
4679414 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 130; Significance: 3e-67; HSPs: 10)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 11 - 325
Target Start/End: Complemental strand, 8586834 - 8586520
Alignment:
| Q |
11 |
ttattcttatcaagcaaatttgcagccactgtaattgcaccatttatctttgtaacttctttagaagagagttttaatttgacatccttattcttcagag |
110 |
Q |
| |
|
|||||||||||||||||||||| ||||| |||||||||| ||| |||||| |||||| || ||||||| |||| ||| | |||||||||||| |||| |
|
|
| T |
8586834 |
ttattcttatcaagcaaatttgtagccattgtaattgcatgattgatctttttaactttttgagaagagcactttagtttaatatccttattctttagag |
8586735 |
T |
 |
| Q |
111 |
catttctcaacttgtaaacacagtcatctaatgcattcattacctccgccttccttaggaatttctcatcttcagcacgatattcctcggcttcttgaat |
210 |
Q |
| |
|
|||| || |||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||| ||| ||||| | || |||| ||||||||||| |
|
|
| T |
8586734 |
cattccttaacttgtaaacacaatcatctaatgaattcattaccttagccttccttaggaatttctgatcctcagcgaggtacacctctgcttcttgaat |
8586635 |
T |
 |
| Q |
211 |
cannnnnnnaatttcatatgctgacaacctttctttgtcattggttattgtgatctcgtttgtattgccagtggatgtttccttcacagaaacagtcatg |
310 |
Q |
| |
|
|| |||||||| || || ||||||||||||||||||||||| || || |||||||||||||||| |||| |||||||| |||||||||| | | |
|
|
| T |
8586634 |
cagtcttttaatttcatcagccgataacctttctttgtcattggttatcgttatttcgtttgtattgccagaggatatttccttcgcagaaacagttagg |
8586535 |
T |
 |
| Q |
311 |
ataccattttcatcg |
325 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
8586534 |
ataccattttcatcg |
8586520 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 11 - 318
Target Start/End: Original strand, 8615755 - 8616062
Alignment:
| Q |
11 |
ttattcttatcaagcaaatttgcagccactgtaattgcaccatttatctttgtaacttctttagaagagagttttaatttgacatccttattcttcagag |
110 |
Q |
| |
|
|||||| ||||||||||||||| |||||| ||||||||| || || ||| ||||| || ||| || || ||||| |||||||||||||| |||| |
|
|
| T |
8615755 |
ttattcctatcaagcaaatttgtagccacagtaattgcattgttgatattttcaactttttgagatgatagctttaaagcaacatccttattctttagag |
8615854 |
T |
 |
| Q |
111 |
catttctcaacttgtaaacacagtcatctaatgcattcattacctccgccttccttaggaatttctcatcttcagcacgatattcctcggcttcttgaat |
210 |
Q |
| |
|
|||| ||||||||||||| |||||||||||| |||||||||||| ||||||||||||||||| ||||||||||| || || ||||| ||||||||||| |
|
|
| T |
8615855 |
cattcctcaacttgtaaatgcagtcatctaattcattcattaccttggccttccttaggaatttttcatcttcagcgcggtactcctctgcttcttgaat |
8615954 |
T |
 |
| Q |
211 |
cannnnnnnaatttcatatgctgacaacctttctttgtcattggttattgtgatctcgtttgtattgccagtggatgtttccttcacagaaacagtcatg |
310 |
Q |
| |
|
|| |||||||| || || ||||||||||||||||||||||| || || || |||||||||||||| ||| |||||||| |||| ||||| | | |
|
|
| T |
8615955 |
cagttttttaatttcatcagccgataacctttctttgtcattggttatcgttatttcatttgtattgccagtagatttttccttcgcagatacagtaagg |
8616054 |
T |
 |
| Q |
311 |
ataccatt |
318 |
Q |
| |
|
|||||||| |
|
|
| T |
8616055 |
ataccatt |
8616062 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 67 - 323
Target Start/End: Original strand, 3146363 - 3146619
Alignment:
| Q |
67 |
ttctttagaagagagttttaatttgacatccttattcttcagagcatttctcaacttgtaaacacagtcatctaatgcattcattacctccgccttcctt |
166 |
Q |
| |
|
||||| ||| ||||| |||| || |||||||| ||||| | ||||||| ||| |||||||||||| | |||||||||||||||||| | ||||||||| |
|
|
| T |
3146363 |
ttcttgagaggagagatttatattcacatccttcttctttaaagcatttttcatcttgtaaacacaataatctaatgcattcattacattggccttcctt |
3146462 |
T |
 |
| Q |
167 |
aggaatttctcatcttcagcacgatattcctcggcttcttgaatcannnnnnnaatttcatatgctgacaacctttctttgtcattggttattgtgatct |
266 |
Q |
| |
|
|| ||||| ||||| ||| |||| || | || ||||||| |||| |||||| | | |||||| |||||||||||||| |||| ||| |||| |
|
|
| T |
3146463 |
agaaatttttcatcctcaacacggtaattttcagcttctttgatcatttttataatttcttgggatgacaatctttctttgtcattagttactgtaatct |
3146562 |
T |
 |
| Q |
267 |
cgtttgtattgccagtggatgtttccttcacagaaacagtcatgataccattttcat |
323 |
Q |
| |
|
| || ||| | ||||||||| |||| || |||||||| | | ||| |||||||||| |
|
|
| T |
3146563 |
cattcgtactaccagtggatttttcattagcagaaacaattaagatgccattttcat |
3146619 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 232 - 324
Target Start/End: Original strand, 8666680 - 8666772
Alignment:
| Q |
232 |
tgacaacctttctttgtcattggttattgtgatctcgtttgtattgccagtggatgtttccttcacagaaacagtcatgataccattttcatc |
324 |
Q |
| |
|
||||||||||||||||||||||||||| |||||| ||| ||||||| |||||| ||||| | ||| |||||||| ||||||||||||||| |
|
|
| T |
8666680 |
tgacaacctttctttgtcattggttatggtgatcatgttcatattgcctgtggatatttccctagcagtaacagtcaggataccattttcatc |
8666772 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 67 - 184
Target Start/End: Original strand, 8645976 - 8646093
Alignment:
| Q |
67 |
ttctttagaagagagttttaatttgacatccttattcttcagagcatttctcaacttgtaaacacagtcatctaatgcattcattacctccgccttcctt |
166 |
Q |
| |
|
||||||||| ||||| |||||||| |||||||| |||| ||||| || ||| ||| |||| || | |||||| |||||||||| | ||||||||| |
|
|
| T |
8645976 |
ttctttagatgagagatttaatttaacatccttcctctttagagctttcttcagcttataaatgcaatggtctaatccattcattacattggccttcctt |
8646075 |
T |
 |
| Q |
167 |
aggaatttctcatcttca |
184 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
8646076 |
aggaatttctcatcttca |
8646093 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 122 - 324
Target Start/End: Complemental strand, 13334382 - 13334180
Alignment:
| Q |
122 |
ttgtaaacacagtcatctaatgcattcattacctccgccttccttaggaatttctcatcttcagcacgatattcctcggcttcttgaatcannnnnnnaa |
221 |
Q |
| |
|
||||||||||| |||||||||||||||||||| |||||||||| |||||||| |||||| || | ||||||| ||||||| ||||| || |
|
|
| T |
13334382 |
ttgtaaacacaagaatctaatgcattcattaccttggccttccttaagaatttcttatcttcgacatggtattccttagcttctttaatcattttttcaa |
13334283 |
T |
 |
| Q |
222 |
tttcatatgctgacaacctttctttgtcattggttattgtgatctcgtttgtattgccagtggatgtttccttcacagaaacagtcatgataccattttc |
321 |
Q |
| |
|
|||| | ||| ||||||||||||||||| || || |||||| |||| ||||||| || ||| | ||||| ||| ||| |||| ||| |||||||| |
|
|
| T |
13334282 |
tttctaacattgataacctttctttgtcattagtaatggtgatcgcgttcatattgcctgtagatatatccttagcagtaaccgtcaggatgccattttc |
13334183 |
T |
 |
| Q |
322 |
atc |
324 |
Q |
| |
|
||| |
|
|
| T |
13334182 |
atc |
13334180 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 73 - 184
Target Start/End: Complemental strand, 8640764 - 8640653
Alignment:
| Q |
73 |
agaagagagttttaatttgacatccttattcttcagagcatttctcaacttgtaaacacagtcatctaatgcattcattacctccgccttccttaggaat |
172 |
Q |
| |
|
||||||||| |||| ||| | |||||||||||| |||||||| ||| |||||||| || | |||||| ||||||||| | ||||||||||||||| |
|
|
| T |
8640764 |
agaagagagctttagtttaatatccttattctttagagcattcttcatcttgtaaatgcaatagtctaatccattcattaaattggccttccttaggaat |
8640665 |
T |
 |
| Q |
173 |
ttctcatcttca |
184 |
Q |
| |
|
|||||| ||||| |
|
|
| T |
8640664 |
ttctcagcttca |
8640653 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 122 - 324
Target Start/End: Complemental strand, 10495388 - 10495186
Alignment:
| Q |
122 |
ttgtaaacacagtcatctaatgcattcattacctccgccttccttaggaatttctcatcttcagcacgatattcctcggcttcttgaatcannnnnnnaa |
221 |
Q |
| |
|
||||||||||| |||||||||| ||||||||| |||||||||| ||||||| |||||| || | |||| || ||||||| ||||| || |
|
|
| T |
10495388 |
ttgtaaacacaagaatctaatgcactcattaccttggccttccttaagaatttcatatcttcgacatggtatttcttagcttctttaatcatttttttaa |
10495289 |
T |
 |
| Q |
222 |
tttcatatgctgacaacctttctttgtcattggttattgtgatctcgtttgtattgccagtggatgtttccttcacagaaacagtcatgataccattttc |
321 |
Q |
| |
|
|||| | ||||||||||||||||||||| || || |||||| |||| ||||||| || ||| | ||||| ||| |||||||| ||| |||||||| |
|
|
| T |
10495288 |
tttctaacattgacaacctttctttgtcattagtaatggtgatcgcgttcatattgcctgtagatatatccttagcagtaacagtcaggatgccattttc |
10495189 |
T |
 |
| Q |
322 |
atc |
324 |
Q |
| |
|
||| |
|
|
| T |
10495188 |
atc |
10495186 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 324
Target Start/End: Original strand, 6788775 - 6788865
Alignment:
| Q |
234 |
acaacctttctttgtcattggttattgtgatctcgtttgtattgccagtggatgtttccttcacagaaacagtcatgataccattttcatc |
324 |
Q |
| |
|
||||||||||||||| ||||||||| || ||||| || ||||||| |||||| |||| | ||||||| |||| |||||||||||||| |
|
|
| T |
6788775 |
acaacctttctttgtaattggttatggtaatctcattcatattgcccgtggatttttcagtagcagaaacggtcaaaataccattttcatc |
6788865 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 325
Target Start/End: Original strand, 17259498 - 17259587
Alignment:
| Q |
236 |
aacctttctttgtcattggttattgtgatctcgtttgtattgccagtggatgtttccttcacagaaacagtcatgataccattttcatcg |
325 |
Q |
| |
|
|||||| ||||||||||||||||||| ||||| || || ||||||||||| | ||| | ||||||| |||| |||||||||| |||| |
|
|
| T |
17259498 |
aaccttcctttgtcattggttattgtaatctcattcttactgccagtggatttgtccatagcagaaactgtcaaaataccattttgatcg |
17259587 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 84; Significance: 7e-40; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 9 - 321
Target Start/End: Original strand, 30774290 - 30774602
Alignment:
| Q |
9 |
gattattcttatcaagcaaatttgcagccactgtaattgcaccatttatctttgtaacttctttagaagagagttttaatttgacatccttattcttcag |
108 |
Q |
| |
|
|||||||||||||||||||||||| |||||||| ||||||| || | |||||| | | || || ||| || || ||||| || || |||||| |||| || |
|
|
| T |
30774290 |
gattattcttatcaagcaaatttgtagccactgcaattgcatcagtgatctttttgagtttttgagatgatagctttaaatttacgtccttaatctttag |
30774389 |
T |
 |
| Q |
109 |
agcatttctcaacttgtaaacacagtcatctaatgcattcattacctccgccttccttaggaatttctcatcttcagcacgatattcctcggcttcttga |
208 |
Q |
| |
|
| |||| ||||||||||||| ||| ||||||||||||||||||| | |||||||||||||||||||||||||||||| || || ||||||||| |
|
|
| T |
30774390 |
accattcctcaacttgtaaatgcagcaatctaatgcattcattaccatagacttccttaggaatttctcatcttcagcacggtactctctagcttcttga |
30774489 |
T |
 |
| Q |
209 |
atcannnnnnnaatttcatatgctgacaacctttctttgtcattggttattgtgatctcgtttgtattgccagtggatgtttccttcacagaaacagtca |
308 |
Q |
| |
|
|||| |||||| | | || |||||||||||||| |||||||| |||||||| || |||||||||||||| ||||| | |||||||| ||| |
|
|
| T |
30774490 |
atcattttgttaatttcttctctggataacctttctttgtcgttggttatcgtgatctcattcatattgccagtggatttttccatagcagaaacattca |
30774589 |
T |
 |
| Q |
309 |
tgataccattttc |
321 |
Q |
| |
|
||||||||||| |
|
|
| T |
30774590 |
gtataccattttc |
30774602 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 80; Significance: 2e-37; HSPs: 3)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 83 - 267
Target Start/End: Complemental strand, 16663051 - 16662867
Alignment:
| Q |
83 |
tttaatttgacatccttattcttcagagcatttctcaacttgtaaacacagtcatctaatgcattcattacctccgccttccttaggaatttctcatctt |
182 |
Q |
| |
|
||||||||||||| ||||||||| |||||||| ||||| ||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
16663051 |
tttaatttgacattcttattctttagagcattcctcaatttgtaaatgcagtcatctaatgcattcattaccttggccttccttaggaatttctcatctt |
16662952 |
T |
 |
| Q |
183 |
cagcacgatattcctcggcttcttgaatcannnnnnnaatttcatatgctgacaacctttctttgtcattggttattgtgatctc |
267 |
Q |
| |
|
||||| | || |||| ||||||||||||| |||||| | || ||||||||||||||||||||||| |||||||| |
|
|
| T |
16662951 |
cagcatggtactccttagcttcttgaatcaatttttcaatttcgactctggataacctttctttgtcattggttatcgtgatctc |
16662867 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 232 - 325
Target Start/End: Complemental strand, 16658427 - 16658334
Alignment:
| Q |
232 |
tgacaacctttctttgtcattggttattgtgatctcgtttgtattgccagtggatgtttccttcacagaaacagtcatgataccattttcatcg |
325 |
Q |
| |
|
|||||| |||||||| ||||||||||| ||||||| ||||||||| || || ||| |||||| |||||||||| | |||||||||||||||| |
|
|
| T |
16658427 |
tgacaatctttctttttcattggttatggtgatcttgtttgtatttcctgtagatacttccttagcagaaacagttaggataccattttcatcg |
16658334 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 281
Target Start/End: Complemental strand, 12246316 - 12246267
Alignment:
| Q |
232 |
tgacaacctttctttgtcattggttattgtgatctcgtttgtattgccag |
281 |
Q |
| |
|
||||||||||||||||| ||| |||||||| ||||| |||| |||||||| |
|
|
| T |
12246316 |
tgacaacctttctttgtaattagttattgtaatctcatttgaattgccag |
12246267 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 54; Significance: 6e-22; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 73 - 182
Target Start/End: Original strand, 43743918 - 43744027
Alignment:
| Q |
73 |
agaagagagttttaatttgacatccttattcttcagagcatttctcaacttgtaaacacagtcatctaatgcattcattacctccgccttccttaggaat |
172 |
Q |
| |
|
|||||| || |||||||| |||||||||||||| | |||||| |||||||||||||| || |||||||||||||||||||| | || ||||| || ||| |
|
|
| T |
43743918 |
agaagaaagctttaatttaacatccttattctttacagcattcctcaacttgtaaacccattcatctaatgcattcattacattggctttcctaagaaat |
43744017 |
T |
 |
| Q |
173 |
ttctcatctt |
182 |
Q |
| |
|
|||||||||| |
|
|
| T |
43744018 |
ttctcatctt |
43744027 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 69 - 179
Target Start/End: Original strand, 43445783 - 43445894
Alignment:
| Q |
69 |
ctttagaagagagttttaatttgacatccttattcttcagagcatttctcaacttgtaaa-cacagtcatctaatgcattcattacctccgccttcctta |
167 |
Q |
| |
|
||||||| ||||| |||||||| | |||||||||||| | | |||| |||||| |||||| | || |||||||||||||||||||| | |||||||| | |
|
|
| T |
43445783 |
ctttagacgagagctttaatttaatatccttattctttacaacattcctcaacctgtaaaacccattcatctaatgcattcattacattggccttcctaa |
43445882 |
T |
 |
| Q |
168 |
ggaatttctcat |
179 |
Q |
| |
|
| |||||||||| |
|
|
| T |
43445883 |
gaaatttctcat |
43445894 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 94 - 182
Target Start/End: Original strand, 28219041 - 28219129
Alignment:
| Q |
94 |
atccttattcttcagagcatttctcaacttgtaaacacagtcatctaatgcattcattacctccgccttccttaggaatttctcatctt |
182 |
Q |
| |
|
|||||||||||| |||||||| |||||||||||||| |||||||||||||||||||| || | ||||||||||| ||||| ||||||| |
|
|
| T |
28219041 |
atccttattctttagagcattcctcaacttgtaaacgcagtcatctaatgcattcatgacattggccttccttagaaatttttcatctt |
28219129 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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