View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15941_low_95 (Length: 328)

Name: NF15941_low_95
Description: NF15941
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15941_low_95
NF15941_low_95
[»] chr7 (39 HSPs)
chr7 (13-312)||(16372728-16373029)
chr7 (86-248)||(27256617-27256780)
chr7 (98-251)||(4579914-4580069)
chr7 (99-248)||(26341626-26341776)
chr7 (144-268)||(4930685-4930808)
chr7 (144-268)||(30258565-30258689)
chr7 (99-268)||(42626097-42626266)
chr7 (146-268)||(2595288-2595411)
chr7 (86-248)||(40864915-40865078)
chr7 (214-268)||(13313792-13313846)
chr7 (99-268)||(44422646-44422810)
chr7 (96-248)||(8076439-8076594)
chr7 (99-268)||(8268711-8268882)
chr7 (86-270)||(9008540-9008724)
chr7 (189-272)||(10532358-10532440)
chr7 (13-114)||(3880318-3880417)
chr7 (144-268)||(12799850-12799973)
chr7 (163-272)||(26286647-26286756)
chr7 (96-184)||(23866462-23866551)
chr7 (96-244)||(44509928-44510078)
chr7 (214-281)||(10499701-10499768)
chr7 (214-281)||(10504730-10504797)
chr7 (96-184)||(9650576-9650664)
chr7 (162-272)||(6590518-6590628)
chr7 (219-281)||(10499620-10499681)
chr7 (219-281)||(10504649-10504710)
chr7 (147-184)||(6898047-6898084)
chr7 (13-116)||(10498406-10498509)
chr7 (13-116)||(10503435-10503538)
chr7 (13-116)||(13337019-13337122)
chr7 (101-231)||(19640697-19640828)
chr7 (144-270)||(23319382-23319507)
chr7 (216-270)||(15642782-15642835)
chr7 (13-54)||(9650692-9650733)
chr7 (214-247)||(14259516-14259549)
chr7 (214-247)||(16580739-16580772)
chr7 (154-272)||(10387860-10387975)
chr7 (13-116)||(13344907-13345010)
chr7 (101-184)||(29477904-29477993)
[»] chr4 (54 HSPs)
chr4 (13-268)||(48276166-48276421)
chr4 (13-268)||(8029851-8030105)
chr4 (13-270)||(39216609-39216867)
chr4 (24-268)||(19906584-19906826)
chr4 (96-251)||(42316154-42316310)
chr4 (13-174)||(12874861-12875023)
chr4 (99-268)||(37259373-37259540)
chr4 (144-268)||(51698384-51698508)
chr4 (95-268)||(16421453-16421628)
chr4 (99-268)||(19540688-19540858)
chr4 (50-268)||(33462873-33463088)
chr4 (99-268)||(31269445-31269611)
chr4 (99-268)||(31273934-31274100)
chr4 (99-268)||(37264073-37264240)
chr4 (95-268)||(55252077-55252252)
chr4 (87-270)||(15805146-15805329)
chr4 (99-248)||(5270950-5271098)
chr4 (96-264)||(32081638-32081807)
chr4 (83-204)||(8536639-8536762)
chr4 (99-248)||(31728918-31729066)
chr4 (96-270)||(6943196-6943370)
chr4 (13-126)||(12878562-12878674)
chr4 (99-249)||(5927743-5927894)
chr4 (144-268)||(12823397-12823521)
chr4 (99-248)||(8694132-8694282)
chr4 (214-268)||(42758365-42758419)
chr4 (144-268)||(19107075-19107197)
chr4 (99-248)||(31766290-31766440)
chr4 (106-248)||(34560823-34560966)
chr4 (96-269)||(13065310-13065483)
chr4 (95-270)||(23093530-23093704)
chr4 (86-233)||(39319946-39320092)
chr4 (187-267)||(55150094-55150173)
chr4 (96-250)||(43477555-43477710)
chr4 (139-268)||(33468512-33468641)
chr4 (96-248)||(7902661-7902814)
chr4 (101-248)||(41817179-41817326)
chr4 (96-248)||(47575051-47575206)
chr4 (13-115)||(42758414-42758516)
chr4 (163-250)||(47244625-47244712)
chr4 (96-248)||(3997612-3997768)
chr4 (144-268)||(19102444-19102567)
chr4 (96-184)||(13521601-13521689)
chr4 (217-268)||(1150882-1150933)
chr4 (214-268)||(13059994-13060047)
chr4 (212-250)||(16948527-16948565)
chr4 (147-196)||(33722558-33722607)
chr4 (97-181)||(16595618-16595704)
chr4 (96-181)||(40840725-40840811)
chr4 (147-181)||(55081351-55081385)
chr4 (13-54)||(13521717-13521758)
chr4 (95-191)||(31786037-31786134)
chr4 (144-196)||(1150946-1150998)
chr4 (212-244)||(24522915-24522947)
[»] chr1 (38 HSPs)
chr1 (13-268)||(16833807-16834061)
chr1 (13-268)||(23192335-23192590)
chr1 (13-268)||(7882317-7882572)
chr1 (99-268)||(25844172-25844341)
chr1 (101-268)||(16649143-16649310)
chr1 (96-248)||(3094481-3094633)
chr1 (144-268)||(39200270-39200393)
chr1 (99-268)||(33300752-33300924)
chr1 (96-268)||(38621120-38621294)
chr1 (99-240)||(17214001-17214141)
chr1 (99-248)||(10140514-10140662)
chr1 (96-247)||(18784104-18784258)
chr1 (95-268)||(19798509-19798683)
chr1 (99-268)||(47450733-47450904)
chr1 (99-248)||(10135746-10135894)
chr1 (86-248)||(41097509-41097672)
chr1 (214-268)||(39587867-39587921)
chr1 (86-267)||(39037224-39037402)
chr1 (99-248)||(51041037-51041187)
chr1 (86-247)||(8267386-8267548)
chr1 (144-270)||(28434140-28434265)
chr1 (99-248)||(26927247-26927397)
chr1 (101-250)||(40232913-40233063)
chr1 (73-178)||(27311384-27311492)
chr1 (163-281)||(12260475-12260593)
chr1 (96-245)||(33055434-33055584)
chr1 (147-250)||(31064367-31064471)
chr1 (214-265)||(40166496-40166547)
chr1 (147-193)||(33380566-33380612)
chr1 (131-195)||(2493457-2493522)
chr1 (147-196)||(9252744-9252793)
chr1 (127-196)||(25661481-25661550)
chr1 (148-196)||(19309244-19309292)
chr1 (147-193)||(24159458-24159504)
chr1 (147-181)||(28857712-28857746)
chr1 (96-184)||(40166403-40166492)
chr1 (216-249)||(47381068-47381101)
chr1 (152-196)||(36725124-36725168)
[»] scaffold0002 (2 HSPs)
scaffold0002 (13-268)||(4396-4650)
scaffold0002 (99-281)||(443439-443621)
[»] chr5 (39 HSPs)
chr5 (13-268)||(39518732-39518985)
chr5 (13-268)||(39523371-39523624)
chr5 (66-268)||(4872289-4872488)
chr5 (96-248)||(36941815-36941967)
chr5 (99-268)||(9726262-9726431)
chr5 (96-248)||(557088-557240)
chr5 (96-248)||(561860-562012)
chr5 (99-268)||(37248309-37248480)
chr5 (99-268)||(40148315-40148484)
chr5 (97-268)||(23688511-23688683)
chr5 (96-248)||(36937061-36937213)
chr5 (99-248)||(26667692-26667842)
chr5 (99-248)||(26939289-26939439)
chr5 (99-248)||(29167499-29167649)
chr5 (86-248)||(13301041-13301202)
chr5 (99-248)||(7452174-7452322)
chr5 (86-248)||(31731918-31732081)
chr5 (99-248)||(36424057-36424207)
chr5 (96-270)||(23757319-23757494)
chr5 (96-270)||(23822775-23822950)
chr5 (103-249)||(36429133-36429280)
chr5 (99-248)||(37549678-37549828)
chr5 (213-281)||(15414388-15414455)
chr5 (96-268)||(6513422-6513596)
chr5 (99-248)||(37652476-37652626)
chr5 (214-268)||(20180664-20180718)
chr5 (96-184)||(12044751-12044840)
chr5 (144-268)||(12103492-12103614)
chr5 (146-268)||(35679396-35679520)
chr5 (86-189)||(21323585-21323689)
chr5 (107-181)||(1429724-1429799)
chr5 (214-281)||(16115726-16115792)
chr5 (96-173)||(6155037-6155114)
chr5 (13-54)||(32461277-32461318)
chr5 (214-248)||(41997174-41997208)
chr5 (214-248)||(42001943-42001977)
chr5 (13-54)||(3666235-3666276)
chr5 (216-281)||(32287762-32287826)
chr5 (96-184)||(32461160-32461249)
[»] chr2 (29 HSPs)
chr2 (13-268)||(30651251-30651504)
chr2 (13-268)||(29678090-29678344)
chr2 (103-268)||(25496831-25496997)
chr2 (78-268)||(42926151-42926341)
chr2 (22-268)||(7737370-7737616)
chr2 (144-268)||(9180235-9180359)
chr2 (99-268)||(1934502-1934669)
chr2 (99-268)||(9184926-9185094)
chr2 (99-244)||(18344842-18344988)
chr2 (103-268)||(25477803-25477969)
chr2 (12-233)||(13291075-13291298)
chr2 (99-268)||(12797344-12797513)
chr2 (86-281)||(17453101-17453296)
chr2 (99-248)||(17968489-17968639)
chr2 (13-184)||(19094086-19094258)
chr2 (86-244)||(6297447-6297606)
chr2 (99-244)||(19892003-19892149)
chr2 (99-268)||(31327169-31327339)
chr2 (96-184)||(30643513-30643602)
chr2 (163-270)||(40847095-40847202)
chr2 (96-184)||(10160337-10160426)
chr2 (96-184)||(30658568-30658656)
chr2 (96-184)||(35602316-35602405)
chr2 (188-283)||(19578071-19578166)
chr2 (98-182)||(14104951-14105037)
chr2 (214-268)||(30619403-30619456)
chr2 (150-196)||(17255011-17255057)
chr2 (214-251)||(7735124-7735161)
chr2 (214-247)||(23068304-23068337)
[»] chr8 (32 HSPs)
chr8 (13-268)||(40125404-40125658)
chr8 (25-268)||(17026270-17026514)
chr8 (25-268)||(17556762-17557006)
chr8 (13-265)||(17953485-17953739)
chr8 (73-268)||(15875201-15875400)
chr8 (144-268)||(38181751-38181875)
chr8 (95-268)||(19167059-19167234)
chr8 (93-268)||(1910463-1910640)
chr8 (144-268)||(17020814-17020938)
chr8 (144-268)||(17551251-17551375)
chr8 (96-248)||(31449415-31449567)
chr8 (99-265)||(44925433-44925599)
chr8 (99-268)||(1807866-1808033)
chr8 (96-248)||(4237891-4238043)
chr8 (96-248)||(4242630-4242782)
chr8 (99-249)||(15951078-15951230)
chr8 (96-268)||(18875897-18876070)
chr8 (99-265)||(36683999-36684168)
chr8 (86-189)||(37772086-37772190)
chr8 (86-182)||(25367603-25367700)
chr8 (86-248)||(8330914-8331077)
chr8 (214-268)||(33417063-33417117)
chr8 (96-184)||(43302300-43302389)
chr8 (148-272)||(2966099-2966222)
chr8 (214-270)||(23548121-23548177)
chr8 (94-281)||(7002063-7002252)
chr8 (123-272)||(24672828-24672977)
chr8 (96-272)||(26779531-26779708)
chr8 (86-248)||(34818257-34818419)
chr8 (127-193)||(19954663-19954730)
chr8 (147-193)||(19950230-19950276)
chr8 (144-180)||(33417011-33417047)
[»] chr6 (30 HSPs)
chr6 (16-268)||(14509310-14509559)
chr6 (13-270)||(17913919-17914176)
chr6 (96-268)||(2699602-2699776)
chr6 (123-268)||(16835667-16835809)
chr6 (99-268)||(6407370-6407537)
chr6 (99-268)||(11570253-11570424)
chr6 (96-270)||(19994902-19995076)
chr6 (105-268)||(20747810-20747974)
chr6 (150-268)||(11428427-11428546)
chr6 (99-268)||(12689391-12689560)
chr6 (99-268)||(11559725-11559896)
chr6 (95-268)||(4156860-4157037)
chr6 (83-267)||(22609942-22610133)
chr6 (86-250)||(24588727-24588893)
chr6 (100-268)||(25313962-25314131)
chr6 (100-268)||(26201456-26201625)
chr6 (86-268)||(5856422-5856605)
chr6 (99-268)||(11534215-11534386)
chr6 (146-270)||(12405863-12405986)
chr6 (99-268)||(33687156-33687326)
chr6 (99-248)||(17964085-17964235)
chr6 (86-146)||(15991304-15991363)
chr6 (96-281)||(2759905-2760089)
chr6 (101-177)||(6112402-6112479)
chr6 (153-230)||(17599842-17599919)
chr6 (147-196)||(35130037-35130086)
chr6 (96-233)||(22694851-22694990)
chr6 (131-196)||(14042038-14042104)
chr6 (216-281)||(12799446-12799510)
chr6 (96-182)||(32001774-32001862)
[»] chr3 (45 HSPs)
chr3 (99-268)||(23665632-23665799)
chr3 (96-248)||(8888322-8888474)
chr3 (102-268)||(27709353-27709518)
chr3 (99-268)||(24037880-24038047)
chr3 (99-268)||(23660973-23661140)
chr3 (86-281)||(35456455-35456652)
chr3 (99-268)||(757873-758044)
chr3 (96-248)||(3034035-3034187)
chr3 (96-245)||(3693010-3693159)
chr3 (13-268)||(12965396-12965646)
chr3 (96-248)||(8070070-8070222)
chr3 (96-248)||(8883562-8883714)
chr3 (99-268)||(55326194-55326364)
chr3 (99-248)||(18467643-18467793)
chr3 (99-268)||(29350658-29350827)
chr3 (96-244)||(3672978-3673126)
chr3 (163-268)||(20520438-20520543)
chr3 (149-268)||(7570725-7570844)
chr3 (95-281)||(17025598-17025785)
chr3 (86-248)||(10585740-10585903)
chr3 (99-248)||(14438226-14438374)
chr3 (123-268)||(46964452-46964598)
chr3 (96-248)||(45904096-45904249)
chr3 (102-244)||(39775258-39775401)
chr3 (99-248)||(18472425-18472575)
chr3 (147-268)||(3419454-3419575)
chr3 (13-129)||(12971291-12971405)
chr3 (144-268)||(3656738-3656858)
chr3 (96-270)||(10708208-10708383)
chr3 (101-181)||(49019800-49019881)
chr3 (144-271)||(25726280-25726406)
chr3 (101-203)||(28125524-28125627)
chr3 (161-272)||(32747652-32747763)
chr3 (131-196)||(48431937-48432003)
chr3 (144-193)||(4662573-4662622)
chr3 (86-244)||(6595908-6596067)
chr3 (214-265)||(55431815-55431865)
chr3 (98-198)||(12900644-12900745)
chr3 (214-270)||(12899268-12899324)
chr3 (149-193)||(16983375-16983419)
chr3 (201-243)||(9121674-9121716)
chr3 (216-268)||(11997532-11997585)
chr3 (214-247)||(18699329-18699362)
chr3 (118-173)||(18011753-18011809)
chr3 (212-272)||(49020018-49020078)
[»] scaffold0182 (1 HSPs)
scaffold0182 (96-248)||(9431-9583)
[»] scaffold0054 (2 HSPs)
scaffold0054 (95-268)||(29588-29762)
scaffold0054 (95-268)||(25868-26042)
[»] scaffold0011 (2 HSPs)
scaffold0011 (72-249)||(145956-146136)
scaffold0011 (214-247)||(126913-126946)
[»] scaffold0009 (1 HSPs)
scaffold0009 (95-270)||(147896-148073)
[»] scaffold0240 (1 HSPs)
scaffold0240 (94-270)||(4386-4563)
[»] scaffold0352 (1 HSPs)
scaffold0352 (99-268)||(7524-7693)
[»] scaffold0060 (2 HSPs)
scaffold0060 (96-248)||(52467-52620)
scaffold0060 (106-248)||(47523-47666)
[»] scaffold0020 (1 HSPs)
scaffold0020 (86-248)||(791-954)
[»] scaffold0061 (2 HSPs)
scaffold0061 (86-177)||(46159-46251)
scaffold0061 (214-248)||(49534-49568)
[»] scaffold0017 (2 HSPs)
scaffold0017 (86-177)||(152536-152628)
scaffold0017 (214-248)||(149066-149100)
[»] scaffold0018 (2 HSPs)
scaffold0018 (127-184)||(171361-171418)
scaffold0018 (214-247)||(21817-21850)
[»] scaffold0008 (1 HSPs)
scaffold0008 (116-268)||(256224-256377)
[»] scaffold0041 (1 HSPs)
scaffold0041 (86-189)||(35314-35418)
[»] scaffold0045 (2 HSPs)
scaffold0045 (96-244)||(83443-83595)
scaffold0045 (214-248)||(81325-81359)
[»] scaffold0628 (1 HSPs)
scaffold0628 (89-247)||(6773-6931)
[»] scaffold0226 (1 HSPs)
scaffold0226 (150-196)||(5897-5943)


Alignment Details
Target: chr7 (Bit Score: 227; Significance: 1e-125; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 13 - 312
Target Start/End: Original strand, 16372728 - 16373029
Alignment:
Q  13 attctaacatctaacttattcaagaatggaataagaatatattttaagatctatcataatttttcgaagtgacattataccaaaaaagggactatgatct 112  Q
    ||||||||||||||||| ||||||||| |||||||||||||||||||||||  ||||||||||| |||||||||||||||| ||||||||||||||||||    
T  16372728 attctaacatctaacttcttcaagaattgaataagaatatattttaagatcattcataattttttgaagtgacattataccgaaaaagggactatgatct 16372827  T
Q  113 taaactattatttattctgaagggaca--aaaatatcgaagggactatattcttaagaccattcttaattccgagaggacattataccaaaaagaaacca 210  Q
    ||||||||||||||||| |||||||||  ||||||||||||||||||| |||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  16372828 taaactattatttattccgaagggacataaaaatatcgaagggactatgttcttaagaccattcttaattccgaagggacattataccaaaaagaaacca 16372927  T
Q  211 agatcttaagaacactcttaattctgaagggacagaaaaaaggagatgaagagaagaataacctgttaacaaaaacctgaggagagagaaagagttcttg 310  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| ||||  |||||||||||||||||| |||    
T  16372928 agatcttaagaacactcttaattctgaaaggacagaaaaaaggagatgaagagaagaataacttgttaacacaaactggaggagagagaaagagtttttg 16373027  T
Q  311 at 312  Q
    ||    
T  16373028 at 16373029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 86 - 248
Target Start/End: Original strand, 27256617 - 27256780
Alignment:
Q  86 attataccaaaaaagggactatgatcttaaactattatttattctgaagggacaaaaat-atcgaagggactatattcttaagaccattcttaattccga 184  Q
    |||||||| |||||||||| ||||||||||| ||||||||||||| ||| |||| |||| || |||||||||||  ||||||||||||||||| ||||||    
T  27256617 attataccgaaaaagggaccatgatcttaaaatattatttattctaaagagacataaataattgaagggactatgctcttaagaccattcttatttccga 27256716  T
Q  185 gaggacattataccaaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaa 248  Q
     |||| | || ||| |  |   || | | |||||||||||||||||||||||||||||||||||    
T  27256717 aaggataataaaccgacgatggactatggtcttaagaacactcttaattctgaagggacagaaa 27256780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 98 - 251
Target Start/End: Original strand, 4579914 - 4580069
Alignment:
Q  98 aagggactatgatcttaaactattatttattctgaagggac--aaaaatatcgaagggactatattcttaagaccattcttaattccgagaggacattat 195  Q
    |||||| |||||||||||| |||||||||||  ||||||||  |||| |||||||||||||||  |||||| |||||||||||||| || | ||||||||    
T  4579914 aagggattatgatcttaaaatattatttatttcgaagggacttaaaattatcgaagggactatgctcttaaaaccattcttaattctgaaatgacattat 4580013  T
Q  196 accaaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaaaaa 251  Q
    ||| |||||  |  | | |||||||||||||||||||||  |||||||| ||||||    
T  4580014 accgaaaagggattatggtcttaagaacactcttaattccaaagggacataaaaaa 4580069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 99 - 248
Target Start/End: Original strand, 26341626 - 26341776
Alignment:
Q  99 agggactatgatcttaaac-tattatttattctgaagggacaaaaat-atcgaagggactatattcttaagaccattcttaattccgagaggacattata 196  Q
    ||||||||||||||||||  |||| ||||||||||||||||| | || |||  |||||||||||| ||||||||||||||||||||||  |||||||| |    
T  26341626 agggactatgatcttaaaagtattctttattctgaagggacatatattatcacagggactatatt-ttaagaccattcttaattccgaagggacattaaa 26341724  T
Q  197 ccaaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaa 248  Q
    || |||||  |  | | ||||||||||||||||||||| |||||||||||||    
T  26341725 ccgaaaagggattatggtcttaagaacactcttaattccgaagggacagaaa 26341776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 144 - 268
Target Start/End: Original strand, 4930685 - 4930808
Alignment:
Q  144 tatcgaagggactatattcttaagaccattcttaattccgagaggacattatacc-aaaaagaaaccaagatcttaagaacactcttaattctgaaggga 242  Q
    ||||||||||||||| || |||||||||||||||||| |||  |||||||| ||| ||||||  || | | |||||||||||||||||  ||||||||||    
T  4930685 tatcgaagggactatgtttttaagaccattcttaatttcgaagggacattaaaccgaaaaagggactatggtcttaagaacactctta--tctgaaggga 4930782  T
Q  243 cagaaaaaaggagatgaagagaagaa 268  Q
     |||||||||||||||||||||||||    
T  4930783 tagaaaaaaggagatgaagagaagaa 4930808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 144 - 268
Target Start/End: Original strand, 30258565 - 30258689
Alignment:
Q  144 tatcgaagggactatattcttaagaccattcttaattccgagaggacattataccaaaaagaaaccaagatcttaagaacactcttaattctgaagggac 243  Q
    ||||||||||||| | || || | |||||||||||||||||  |||||||| ||| |||||  || | | ||||||||| ||||||||||  ||||||||    
T  30258565 tatcgaagggactgtgttttttataccattcttaattccgaagggacattaaacccaaaaggcacaatggtcttaagaagactcttaatttcgaagggac 30258664  T
Q  244 agaaaaaaggagatgaagagaagaa 268  Q
    |||||||||||||||||||||||||    
T  30258665 agaaaaaaggagatgaagagaagaa 30258689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 99 - 268
Target Start/End: Complemental strand, 42626266 - 42626097
Alignment:
Q  99 agggactatgatcttaaac-tattatttattctgaagggacaaaaat-atcgaagggactatattcttaagaccattcttaattccgagaggacattata 196  Q
    ||||| ||||||||||||  || | ||||||||||||||||| | || || ||||||||||| || |||||||||||||||||||||   |||||||| |    
T  42626266 agggaatatgatcttaaaagtactctttattctgaagggacatatattattgaagggactatgtt-ttaagaccattcttaattccggagggacattaaa 42626168  T
Q  197 ccaaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaaaaaggagatgaagagaagaa 268  Q
    || |||||  || | | |||||||||||||||| |||| |||||||||  ||||||||||||||||||||||    
T  42626167 ccgaaaagggactatggtcttaagaacactcttgattccgaagggaca-taaaaaggagatgaagagaagaa 42626097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 146 - 268
Target Start/End: Original strand, 2595288 - 2595411
Alignment:
Q  146 tcgaagggactatattcttaagaccattcttaattccgagaggacattatacc-aaaaagaaaccaagatcttaagaacactcttaattctgaagggaca 244  Q
    ||||| ||||||| || ||||||||||||||||||||||  |||||||| ||| ||||||  || | | ||||||||||||||||||||  |||||||||    
T  2595288 tcgaatggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaaagggactacggtcttaagaacactcttaatttcgaagggaca 2595387  T
Q  245 gaaaaaaggagatgaagagaagaa 268  Q
    ||||||| | |||||||| |||||    
T  2595388 gaaaaaatgggatgaagaaaagaa 2595411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 86 - 248
Target Start/End: Complemental strand, 40865078 - 40864915
Alignment:
Q  86 attataccaaaaaagggactatgatcttaaactattatttattctgaagggacaaaaata-tcgaagggactatattcttaagaccattcttaattccga 184  Q
    |||||||| |||||||||| ||||||||| | |||||||| |||| ||| |||| ||||| | |||||||||||  ||||||||||||||||| ||||||    
T  40865078 attataccgaaaaagggaccatgatcttagaatattattttttctaaagagacataaataattgaagggactatgctcttaagaccattcttatttccga 40864979  T
Q  185 gaggacattataccaaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaa 248  Q
     |||| | || ||| |  |   || | | ||||||||||||||||||||| |||||||||||||    
T  40864978 aaggataataaaccgacgatggactatggtcttaagaacactcttaattccgaagggacagaaa 40864915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 214 - 268
Target Start/End: Complemental strand, 13313846 - 13313792
Alignment:
Q  214 tcttaagaacactcttaattctgaagggacagaaaaaaggagatgaagagaagaa 268  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  13313846 tcttaagaacactcttaattccgaagggacagaaaaaaggagatgaagagaagaa 13313792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 99 - 268
Target Start/End: Complemental strand, 44422810 - 44422646
Alignment:
Q  99 agggactatgatcttaaac-tattatttattctgaagggacaaaaatatcgaagggactatattcttaagaccattcttaattccgagaggacattatac 197  Q
    ||||||||||||||||||  || | |||||||||||||||||    ||| ||| | ||||| || ||| ||||||||||||||||||  |||||||| ||    
T  44422810 agggactatgatcttaaaagtactctttattctgaagggaca----tattgaatgaactatgtt-ttacgaccattcttaattccgaagggacattaaac 44422716  T
Q  198 caaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaaaaaggagatgaagagaagaa 268  Q
      ||||  ||| | | ||||||||||||||||||||| ||||||||||| ||||||||||||||| |||||    
T  44422715 ggaaaaagaactatggtcttaagaacactcttaattccgaagggacaga-aaaaggagatgaagaaaagaa 44422646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 96 - 248
Target Start/End: Original strand, 8076439 - 8076594
Alignment:
Q  96 aaaagggactatgatcttaaactattatttattctgaagggacaaaaat-atcgaagggactatattcttaagaccattcttaattccgagaggacatta 194  Q
    ||||||||||||||||||||| ||||||||||||| ||  |||| |||| || |||||||||||  |||||||| ||||||| ||| |||  ||||| ||    
T  8076439 aaaagggactatgatcttaaaatattatttattctaaaaagacataaataattgaagggactatgctcttaagatcattcttgatttcgaagggacaata 8076538  T
Q  195 taccaaaaagaaac--caagatcttaagaacactcttaattctgaagggacagaaa 248  Q
    || | | |||| ||   | | ||||||||||||||||||||| |||||||||||||    
T  8076539 tatcgacaagagactatatgctcttaagaacactcttaattccgaagggacagaaa 8076594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 99 - 268
Target Start/End: Original strand, 8268711 - 8268882
Alignment:
Q  99 agggactatgatcttaaac-tattatttattctgaagggacaaaaat-atcgaagggactatattcttaagaccattcttaattccgagaggacattata 196  Q
    ||||||||||||||||||  || | ||||||| ||||||||| | || |||||| ||||||| || ||||||||||||||||||||||  |||||||| |    
T  8268711 agggactatgatcttaaaagtactctttattccgaagggacatatattatcgaatggactatgtttttaagaccattcttaattccgaagggacattaaa 8268810  T
Q  197 cc-aaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaaaaaggagatgaagagaagaa 268  Q
    || ||||||  || |   ||||||||||||| ||||||  ||||||| || ||||| ||||||||||||||||    
T  8268811 ccgaaaaagggactatcgtcttaagaacactgttaatttcgaagggatag-aaaaatgagatgaagagaagaa 8268882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 86 - 270
Target Start/End: Original strand, 9008540 - 9008724
Alignment:
Q  86 attataccaaaaaagggactatgatcttaaactattatttattctgaagggacaaaaatatcgaagggactatattcttaagaccattcttaattccgag 185  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||| ||| |||||| | |  |||||||||||  |||||||||||||||| ||| |||     
T  9008540 attataccaaaaaggggactatgatcttaaaatattatttattctaaagagacaaata-actgaagggactatgctcttaagaccattcttgatttcgaa 9008638  T
Q  186 aggacattatac--caaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaaaaaggagatgaagagaagaata 270  Q
     ||||  |||||   |||| ||    | | ||||||||| ||||||||||| |||||||  |||||||  |||||||||||||||||    
T  9008639 gggacgatatactgaaaaaggactatatggtcttaagaatactcttaattccgaagggatggaaaaaa-aagatgaagagaagaata 9008724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 189 - 272
Target Start/End: Complemental strand, 10532440 - 10532358
Alignment:
Q  189 acattataccaaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaaaaaggagatgaagagaagaataac 272  Q
    ||||||||||||| || ||| ||| ||||||||||||||||||||   ||||||||||||||| ||||||||||||||||||||    
T  10532440 acattataccaaataggaactaaggtcttaagaacactcttaatttcaaagggacagaaaaaa-gagatgaagagaagaataac 10532358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 13 - 114
Target Start/End: Original strand, 3880318 - 3880417
Alignment:
Q  13 attctaacatctaacttattcaagaatggaataagaatatattttaagatctatcataatttttcgaagtgacattataccaaaaaagggactatgatct 112  Q
    |||||||  |||||||| ||||||||| ||| |||||||||||||||||||  |||||| |||  |||| ||||||||||  ||||||||||||||||||    
T  3880318 attctaatgtctaacttgttcaagaatcgaagaagaatatattttaagatcattcataaattt--gaagggacattatactgaaaaagggactatgatct 3880415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 144 - 268
Target Start/End: Original strand, 12799850 - 12799973
Alignment:
Q  144 tatcgaagggactatattcttaagaccattcttaattccgagaggacattatacc-aaaaagaaaccaagatcttaagaacactcttaattctgaaggga 242  Q
    ||||||| ||||||| || |||||||||||||||||| |||  |||||||| ||| ||||||  || | | |||||| |||||||||||||  |||||||    
T  12799850 tatcgaatggactatgtt-ttaagaccattcttaatttcgaagggacattaaaccgaaaaagggactatggtcttaataacactcttaatttcgaaggga 12799948  T
Q  243 cagaaaaaaggagatgaagagaagaa 268  Q
    ||| ||||||||||||||||||||||    
T  12799949 cag-aaaaaggagatgaagagaagaa 12799973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 163 - 272
Target Start/End: Complemental strand, 26286756 - 26286647
Alignment:
Q  163 ttaagaccattcttaattccgagaggacattataccaaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaaaaaggagatgaaga 262  Q
    ||||||||||||||||||||||  |||||||||||| ||||  |||   | ||||||||| ||| ||| ||| ||||||||||||| ||| |||||| ||    
T  26286756 ttaagaccattcttaattccgaagggacattataccgaaaatgaactgtggtcttaagaaaacttttagttccgaagggacagaaataagaagatgagga 26286657  T
Q  263 gaagaataac 272  Q
    ||||||||||    
T  26286656 gaagaataac 26286647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 96 - 184
Target Start/End: Original strand, 23866462 - 23866551
Alignment:
Q  96 aaaagggactatgatcttaaactattatttattctgaagggacaaaaat-atcgaagggactatattcttaagaccattcttaattccga 184  Q
    ||||||||||||||||||||| ||||||||||||| ||  |||| |||| || |||||||||||  ||||||||| |||||| |||||||    
T  23866462 aaaagggactatgatcttaaaatattatttattctaaaaagacataaataattgaagggactatgctcttaagactattcttgattccga 23866551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 96 - 244
Target Start/End: Complemental strand, 44510078 - 44509928
Alignment:
Q  96 aaaagggactatgatcttaaactattatttattctgaagggacaaaaatatcgaagggactatattcttaagaccattcttaattccgagagga-catta 194  Q
    |||||||||||||||||||||  ||||||||||| |||| ||   || |||||||||||||||  ||||||||||||| || ||| ||| |||| || ||    
T  44510078 aaaagggactatgatcttaaaacattatttattccgaagagaatgaattatcgaagggactatgctcttaagaccattattgatttcga-aggatcaata 44509980  T
Q  195 taccaaaaag--aaaccaagatcttaagaacactcttaattctgaagggaca 244  Q
    |||| | |||  | |  | | |||||||||||||||||||||||||||||||    
T  44509979 taccgacaaggaataatatggtcttaagaacactcttaattctgaagggaca 44509928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 214 - 281
Target Start/End: Complemental strand, 10499768 - 10499701
Alignment:
Q  214 tcttaagaacactcttaattctgaagggacagaaaaaaggagatgaagagaagaataacctgttaaca 281  Q
    |||||||||||||||||||||| |||||||||| ||||  |||||| |||||||||| | ||||||||    
T  10499768 tcttaagaacactcttaattctaaagggacagataaaaaaagatgaggagaagaatagcttgttaaca 10499701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 214 - 281
Target Start/End: Complemental strand, 10504797 - 10504730
Alignment:
Q  214 tcttaagaacactcttaattctgaagggacagaaaaaaggagatgaagagaagaataacctgttaaca 281  Q
    |||||||||||||||||||||| |||||||||| ||||  |||||| |||||||||| | ||||||||    
T  10504797 tcttaagaacactcttaattctaaagggacagataaaaaaagatgaggagaagaatagcttgttaaca 10504730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 96 - 184
Target Start/End: Complemental strand, 9650664 - 9650576
Alignment:
Q  96 aaaagggactatgatcttaaactattatttattctgaagggacaaaaatatcgaagggactatattcttaagaccattcttaattccga 184  Q
    ||||||||||||||||||||| ||||||||||||| ||  |||| |||||    |||| ||||  |||||||||||||||| |||||||    
T  9650664 aaaagggactatgatcttaaaatattatttattctaaaaagacataaataattgaggggctatgctcttaagaccattcttgattccga 9650576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 272
Target Start/End: Complemental strand, 6590628 - 6590518
Alignment:
Q  162 cttaagaccattcttaattccgagaggacattataccaaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaaaaaggagatgaag 261  Q
    ||||||||| ||||||||| |||  | ||||||||||  | ||| || |||| ||||| |||||||||||||  ||||||||| |||||  ||||||| |    
T  6590628 cttaagacctttcttaattacgaatgaacattataccgtatagagactaagaccttaaaaacactcttaatttcgaagggacaaaaaaagagagatgagg 6590529  T
Q  262 agaagaataac 272  Q
    | |||||||||    
T  6590528 ataagaataac 6590518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 219 - 281
Target Start/End: Complemental strand, 10499681 - 10499620
Alignment:
Q  219 agaacactcttaattctgaagggacagaaaaaaggagatgaagagaagaataacctgttaaca 281  Q
    ||||||||||||||||  ||||||||||||||| ||||||| ||||||||||||  |||||||    
T  10499681 agaacactcttaattccaaagggacagaaaaaa-gagatgaggagaagaataactcgttaaca 10499620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 219 - 281
Target Start/End: Complemental strand, 10504710 - 10504649
Alignment:
Q  219 agaacactcttaattctgaagggacagaaaaaaggagatgaagagaagaataacctgttaaca 281  Q
    ||||||||||||||||  ||||||||||||||| ||||||| ||||||||||||  |||||||    
T  10504710 agaacactcttaattccaaagggacagaaaaaa-gagatgaggagaagaataactcgttaaca 10504649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 147 - 184
Target Start/End: Complemental strand, 6898084 - 6898047
Alignment:
Q  147 cgaagggactatattcttaagaccattcttaattccga 184  Q
    |||||||||||| |||||||||||||||||||||||||    
T  6898084 cgaagggactatgttcttaagaccattcttaattccga 6898047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 116
Target Start/End: Original strand, 10498406 - 10498509
Alignment:
Q  13 attctaacatctaacttattcaagaatggaataagaatatatt-ttaagatctatcataatttttcgaagtgacattataccaaaaaagggactatgatc 111  Q
    |||||||||| |||||| | ||||||| ||| ||||||||||| ||||||||  |  ||||||| ||||| |||||||||||  ||||| ||||| ||||    
T  10498406 attctaacatataacttctacaagaattgaagaagaatatattcttaagatcatttttaatttt-cgaagggacattatacctcaaaagagactacgatc 10498504  T
Q  112 ttaaa 116  Q
    |||||    
T  10498505 ttaaa 10498509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 116
Target Start/End: Original strand, 10503435 - 10503538
Alignment:
Q  13 attctaacatctaacttattcaagaatggaataagaatatatt-ttaagatctatcataatttttcgaagtgacattataccaaaaaagggactatgatc 111  Q
    |||||||||| |||||| | ||||||| ||| ||||||||||| ||||||||  |  ||||||| ||||| |||||||||||  ||||| ||||| ||||    
T  10503435 attctaacatataacttctacaagaattgaagaagaatatattcttaagatcatttttaatttt-cgaagggacattatacctcaaaagagactacgatc 10503533  T
Q  112 ttaaa 116  Q
    |||||    
T  10503534 ttaaa 10503538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 116
Target Start/End: Original strand, 13337019 - 13337122
Alignment:
Q  13 attctaacatctaacttattcaagaatggaataagaatatatt-ttaagatctatcataatttttcgaagtgacattataccaaaaaagggactatgatc 111  Q
    ||||||||||||||||| | ||||||| ||| ||||||| ||| ||||||||  || ||| ||||||||  |||||||||||  ||||| ||||| ||||    
T  13337019 attctaacatctaacttctacaagaattgaagaagaatacattcttaagatcattcttaa-ttttcgaaaggacattatacctcaaaagagactacgatc 13337117  T
Q  112 ttaaa 116  Q
    |||||    
T  13337118 ttaaa 13337122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 101 - 231
Target Start/End: Original strand, 19640697 - 19640828
Alignment:
Q  101 ggactatgatcttaaactattatttattctgaagggaca-aaaatatcgaagggactatattcttaagaccattcttaattccgagaggacattatacca 199  Q
    ||||||||||| |||| ||||||||||||| ||| |||| |||  || | ||||||||| || ||||||||||||||| ||  || |||||| || |||     
T  19640697 ggactatgatcataaaatattatttattctaaagagacataaacaatagtagggactatgtttttaagaccattcttagttttgaaaggacaataaaccg 19640796  T
Q  200 aaaagaaaccaagatcttaagaacactcttaa 231  Q
    |||||   | | | ||||||||||||||||||    
T  19640797 aaaagggtctatggtcttaagaacactcttaa 19640828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 144 - 270
Target Start/End: Original strand, 23319382 - 23319507
Alignment:
Q  144 tatcgaagggactatattcttaagaccattcttaattccgagag-gacattataccaaaaagaaaccaagatcttaagaacactcttaattctgaaggga 242  Q
    |||||||| || |||||||| |||||| ||||||||||| |  | ||||||||||| || ||| || ||| | ||||||||||||||||||| ||| |||    
T  23319382 tatcgaagagattatattctcaagacctttcttaattccaaatgagacattatacccaacagagactaaggt-ttaagaacactcttaattccgaatgga 23319480  T
Q  243 cagaaaaaaggagatgaagagaagaata 270  Q
    | || |||| ||||| | ||||||||||    
T  23319481 cggacaaaa-gagataaggagaagaata 23319507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 216 - 270
Target Start/End: Original strand, 15642782 - 15642835
Alignment:
Q  216 ttaagaacactcttaattctgaagggacagaaaaaaggagatgaagagaagaata 270  Q
    ||||||||||| |||||||||||||||||  ||||||||||||| || |||||||    
T  15642782 ttaagaacactattaattctgaagggaca-taaaaaggagatgaggataagaata 15642835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 9650733 - 9650692
Alignment:
Q  13 attctaacatctaacttattcaagaatggaataagaatatat 54  Q
    ||||||||||||||||| ||||||||| ||| ||||||||||    
T  9650733 attctaacatctaacttcttcaagaattgaagaagaatatat 9650692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 247
Target Start/End: Original strand, 14259516 - 14259549
Alignment:
Q  214 tcttaagaacactcttaattctgaagggacagaa 247  Q
    ||||||||||||||||||||| ||||||||||||    
T  14259516 tcttaagaacactcttaattccgaagggacagaa 14259549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 247
Target Start/End: Original strand, 16580739 - 16580772
Alignment:
Q  214 tcttaagaacactcttaattctgaagggacagaa 247  Q
    ||||||||||||||||||||| ||||||||||||    
T  16580739 tcttaagaacactcttaattccgaagggacagaa 16580772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 154 - 272
Target Start/End: Complemental strand, 10387975 - 10387860
Alignment:
Q  154 actatattcttaagaccattcttaattccgagaggacattataccaaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaaaaagg 253  Q
    ||||| || |||||||  |||||||||||||  |||||||||||| || |   || ||| |||||| |||||| ||| ||| ||||||||| |||||       
T  10387975 actatgtttttaagacttttcttaattccgaagggacattataccgaataaggactaaggtcttaaaaacactattatttccgaagggacaaaaaaa--- 10387879  T
Q  254 agatgaagagaagaataac 272  Q
    |||||| ||||||||||||    
T  10387878 agatgaggagaagaataac 10387860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 116
Target Start/End: Original strand, 13344907 - 13345010
Alignment:
Q  13 attctaacatctaacttattcaagaatggaataagaatatatt-ttaagatctatcataatttttcgaagtgacattataccaaaaaagggactatgatc 111  Q
    ||||||||||||||||| | ||||||| ||| || |||| ||| ||||||||  || ||||||| ||||| |||||||||||  ||||| ||||| |||     
T  13344907 attctaacatctaacttctacaagaattgaagaaaaatacattcttaagatcattcttaatttt-cgaagggacattatacctcaaaagagactacgata 13345005  T
Q  112 ttaaa 116  Q
    |||||    
T  13345006 ttaaa 13345010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 101 - 184
Target Start/End: Complemental strand, 29477993 - 29477904
Alignment:
Q  101 ggactatgatcttaa-actattatttattctgaagggacaaaaat-atcgaagggactatat----tcttaagaccattcttaattccga 184  Q
    ||||| ||||||||| | |||| ||| |||||||||||||||| | | | ||||||||||||    ||||||||||||||||||||||||    
T  29477993 ggactttgatcttaagaatattcttttttctgaagggacaaaatttaccaaagggactatatatgttcttaagaccattcttaattccga 29477904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 115; Significance: 2e-58; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 13 - 268
Target Start/End: Complemental strand, 48276421 - 48276166
Alignment:
Q  13 attctaacatctaacttattcaagaatggaataagaatatattttaagatctatcataatttttcgaagtgacattataccaaaaaagggactatgatct 112  Q
    ||||||||||||||||| ||||||||| ||| |||||||||||||||||||  ||||||||||  |||| ||||||| ||| ||||||||||||||||||    
T  48276421 attctaacatctaacttcttcaagaatcgaagaagaatatattttaagatcattcataatttt--gaagggacattacaccgaaaaagggactatgatct 48276324  T
Q  113 taaactattatttattctgaagg-gacaaaaatatcgaagggactatattcttaagaccattcttaattccgagaggacat-tataccaaaaagaaacca 210  Q
    |||| |||||||||||| |||||  | ||||||||||||||||||||    |||||||||||||||||||| |  |||||| || ||| |||||  || |    
T  48276323 taaattattatttattccgaaggacataaaaatatcgaagggactatgaatttaagaccattcttaattccaaagggacatctaaaccgaaaagggacta 48276224  T
Q  211 agatcttaagaacactcttaattctgaagggacagaaaaaaggagatgaagagaagaa 268  Q
       ||||||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  48276223 tagtcttaagaacactcttaattccgaagggacggaaaaaaggagatgaagagaagaa 48276166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 13 - 268
Target Start/End: Complemental strand, 8030105 - 8029851
Alignment:
Q  13 attctaacatctaacttattcaagaatggaataagaatatattttaagatctatcataatttttcgaagtgacattataccaaaaaagggactatgatct 112  Q
    |||||||| |||||||| ||||||||| ||| |||||||||||||| ||||  ||||||||||  |||| ||||||||||| |||||| ||| |||||||    
T  8030105 attctaacgtctaacttcttcaagaatcgaagaagaatatattttaggatcattcataatttt--gaagggacattataccgaaaaagagacaatgatct 8030008  T
Q  113 taaactattatttattctgaaggg-acaaaaatatcgaagggactatattcttaagaccattcttaattccgagaggacattataccaaaaagaaaccaa 211  Q
    |||| |||||||||||| |||||  | |||||||||||| |||||||   ||||| | |||||||||||||||  |||||||| ||| |||||  || |     
T  8030007 taaattattatttattccgaaggacataaaaatatcgaatggactatgaacttaatatcattcttaattccgaagggacattaaaccgaaaagggactat 8029908  T
Q  212 gatcttaagaacactcttaattctgaagggacagaaaaaaggagatgaagagaagaa 268  Q
    | ||||||||||||||||||||  |||||||| ||||||| ||||||||||||||||    
T  8029907 ggtcttaagaacactcttaatttcgaagggacggaaaaaaagagatgaagagaagaa 8029851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 13 - 270
Target Start/End: Complemental strand, 39216867 - 39216609
Alignment:
Q  13 attctaacatctaacttattcaagaatggaataagaatatattttaagatctatcataatttttcgaagtgacattataccaaaaaagggactatgatct 112  Q
    ||||||| ||||||||| | ||||||| ||| |||||||||||||||||||  ||||||||||| |||  || |||||||| ||||| |||||||||| |    
T  39216867 attctaatatctaacttctccaagaatcgaagaagaatatattttaagatcattcataattttttgaaaggatattataccgaaaaatggactatgattt 39216768  T
Q  113 taaactattatttattctgaagggac--aaaaatatcgaagggactatattcttaagaccattcttaattccgagaggacattataccaaaaagaaacca 210  Q
    |||| ||||||||||||  |||||||  |||||||| |||||||||||  ||| |||||| ||||||||| |||  |||||||||||| || ||  || |    
T  39216767 taaaatattatttattccaaagggacataaaaatattgaagggactatgctctcaagacctttcttaatttcgaagggacattataccgaatagggacta 39216668  T
Q  211 agatcttaagaacactcttaattctgaagggacagaaaaaaggagatgaagagaagaata 270  Q
     | |||||||||||||||| ||| ||||||||||| ||||||||||||| ||||||||||    
T  39216667 tggtcttaagaacactcttgattttgaagggacag-aaaaaggagatgaggagaagaata 39216609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 24 - 268
Target Start/End: Original strand, 19906584 - 19906826
Alignment:
Q  24 taacttattcaagaatggaataagaatatattttaagatctatcataatttttcgaagtgacattataccaaaaaagggactatgatcttaaactattat 123  Q
    |||||| ||||||||| ||| || ||||||||||||||||  ||||||||||  |||| ||||||||||| |||||||||||||||||||||| ||||||    
T  19906584 taacttcttcaagaatcgaagaaaaatatattttaagatcattcataatttt--gaagggacattataccgaaaaagggactatgatcttaaaatattat 19906681  T
Q  124 ttattctgaagggac--aaaaatatcgaagggactatattcttaagaccattcttaattccgagaggacattataccaaaaagaaaccaagatcttaaga 221  Q
    ||||| | || ||||  ||||||||||||||||||||   ||||||  |||||||||||||||  | |||||| |||||||||  || | ||||||||||    
T  19906682 ttatt-tcaaaggacttaaaaatatcgaagggactatgaacttaaggtcattcttaattccgaaggaacattaaaccaaaaagggactatgatcttaaga 19906780  T
Q  222 acactcttaattctgaagggacagaaaaaaggagatgaagagaagaa 268  Q
    ||||| ||||||  |||||||||| |||||| |||| ||||||||||    
T  19906781 acactattaatttcgaagggacag-aaaaagaagataaagagaagaa 19906826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 96 - 251
Target Start/End: Complemental strand, 42316310 - 42316154
Alignment:
Q  96 aaaagggactatgatcttaaactattatttattctgaagggacaaaaata-tcgaagggactatattcttaagaccattcttaattccgagaggacatta 194  Q
    ||||||||||||||||||||| ||||||||||  |||||||||| ||||| | ||| |||||||| |||||||||||||||||||| |||  ||||||||    
T  42316310 aaaagggactatgatcttaaaatattatttatcatgaagggacataaataattgaacggactatactcttaagaccattcttaatttcgaagggacatta 42316211  T
Q  195 taccaaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaaaaa 251  Q
    |||| || || ||| ||| ||| || |||||||||||||||||||||||||||||||    
T  42316210 taccgaataggaactaaggtctcaataacactcttaattctgaagggacagaaaaaa 42316154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 13 - 174
Target Start/End: Original strand, 12874861 - 12875023
Alignment:
Q  13 attctaacatctaacttattcaagaatggaataagaatatattttaagatctatcataatttttcgaagtgacattataccaaaaaagggactatgatct 112  Q
    ||||||||||||||||| | ||||||||||| |||||| ||||||||||||  || ||||||| | |||  |||||||||| ||||||||| ||||||||    
T  12874861 attctaacatctaacttctccaagaatggaacaagaatgtattttaagatcattcttaatttt-caaaggaacattataccgaaaaagggattatgatct 12874959  T
Q  113 taaactattatttattctgaaggg--acaaaaatatcgaagggactatattcttaagaccattc 174  Q
    |||| |||||||||||  ||||||  ||||||||||||||||||||||| |||||||| |||||    
T  12874960 taaaatattatttatttcgaagggacacaaaaatatcgaagggactatactcttaagaacattc 12875023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 99 - 268
Target Start/End: Complemental strand, 37259540 - 37259373
Alignment:
Q  99 agggactatgatcttaaac-tattatttattctgaagggacaaaaatatcgaagggactatattcttaagaccattcttaattccgagaggacattatac 197  Q
    ||||||||||||||||||  |||| |||||||||||||||||    ||||||||||||||| || ||||||||||||||||||||||  |||||||| ||    
T  37259540 agggactatgatcttaaaaatattctttattctgaagggacatt--tatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaac 37259443  T
Q  198 caaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaaaaaggagatgaagagaagaa 268  Q
    | |||||  || | | |||||||||||||||||| || ||||||||||| |||||||||||||||||||||    
T  37259442 cgaaaagcgactatggtcttaagaacactcttaaatccgaagggacaga-aaaaggagatgaagagaagaa 37259373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 144 - 268
Target Start/End: Original strand, 51698384 - 51698508
Alignment:
Q  144 tatcgaagggactatattcttaagaccattcttaattccgagaggacattataccaaaaagaaaccaagatcttaagaacactcttaattctgaagggac 243  Q
    ||||||||||||||| || ||||||||||||||||||||||  |||||||| ||| |||||  || |   ||||||||||||||||||||| ||||||||    
T  51698384 tatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaagggactattgtcttaagaacactcttaattccgaagggac 51698483  T
Q  244 agaaaaaaggagatgaagagaagaa 268  Q
    |||||||||||||||||||||||||    
T  51698484 agaaaaaaggagatgaagagaagaa 51698508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 95 - 268
Target Start/End: Original strand, 16421453 - 16421628
Alignment:
Q  95 aaaaagggactatgatcttaa-actattatttattctgaagggacaaaaat-atcgaagggactatattcttaagaccattcttaattccgagaggacat 192  Q
    ||||||||||||||||||||| | || | |||||||  |||||||  | || |||||||||||||| || ||||||||||||||||||||||  ||||||    
T  16421453 aaaaagggactatgatcttaatagtactctttattccaaagggacttatattatcgaagggactatgtttttaagaccattcttaattccgaagggacat 16421552  T
Q  193 tataccaaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaaaaaggagatgaagagaagaa 268  Q
    || ||| | |||  || | | ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||    
T  16421553 taaaccgagaagggactatggtcttaagaacactcttaattccgaatggacagaaaaaaggagatgaagagaagaa 16421628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 99 - 268
Target Start/End: Complemental strand, 19540858 - 19540688
Alignment:
Q  99 agggactatgatcttaaac-tattatttattctgaagggacaaaaat-atcgaagggactatattcttaagaccattcttaattccgagaggacattata 196  Q
    ||||||||||||||||||  || | ||||||| ||||||||| | || |||||||||||||| || ||||||||||||||||||||||  |||||||| |    
T  19540858 agggactatgatcttaaaagtactctttattccgaagggacatatattatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaa 19540759  T
Q  197 ccaaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaaaaaggagatgaagagaagaa 268  Q
    || |||||  || | | ||||||||||||||||||||| ||||||||||| |||||||||| ||||||||||    
T  19540758 ccgaaaagggactatggtcttaagaacactcttaattccgaagggacaga-aaaaggagattaagagaagaa 19540688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 50 - 268
Target Start/End: Complemental strand, 33463088 - 33462873
Alignment:
Q  50 tatattttaagatctatcataatttttcgaagtgacattataccaaaaaagggactatgatcttaaactattatttattctgaaggg-acaaaaatatcg 148  Q
    ||||||||||||||  ||||||||||  |||| ||||||||||  |||| ||||||||||||||||| |||||||||||  |||||  | ||||||||||    
T  33463088 tatattttaagatcattcataatttt--gaagggacattatactgaaaa-gggactatgatcttaaattattatttatttcgaaggacataaaaatatcg 33462992  T
Q  149 aagggactatattcttaagaccattcttaattccgagaggacattataccaaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaa 248  Q
    |||||| |||   |||||||| ||||||||||| ||  |||||||| ||| |||||  || | | ||||||||||||||||||||| ||||| |||| ||    
T  33462991 aagggattatgaacttaagactattcttaattctgaagggacattaaaccgaaaagggactatggtcttaagaacactcttaattccgaaggaacag-aa 33462893  T
Q  249 aaaggagatgaagagaagaa 268  Q
    ||| ||||| ||||||||||    
T  33462892 aaatgagataaagagaagaa 33462873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 99 - 268
Target Start/End: Original strand, 31269445 - 31269611
Alignment:
Q  99 agggactatgatcttaaac-tattatttattctgaagggacaaaaatatcgaagggactatattcttaagaccattcttaattccgagaggacattatac 197  Q
    ||||||||||||||||||  || | |||||||||||||||||    ||||||||||||||| || ||||||||||||||||||||||  |||||||| ||    
T  31269445 agggactatgatcttaaaagtactctttattctgaagggacatt--tatcgaagggactatgtt-ttaagaccattcttaattccgaagggacattaaac 31269541  T
Q  198 caaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaaaaaggagatgaagagaagaa 268  Q
    | |||||  || | | |||||||||||||||||| || |||||||||| ||||||||||||||||||||||    
T  31269542 cgaaaagcgactatggtcttaagaacactcttaaatccgaagggacag-aaaaaggagatgaagagaagaa 31269611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 99 - 268
Target Start/End: Original strand, 31273934 - 31274100
Alignment:
Q  99 agggactatgatcttaaac-tattatttattctgaagggacaaaaatatcgaagggactatattcttaagaccattcttaattccgagaggacattatac 197  Q
    ||||||||||||||||||  || | |||||||||||||||||    ||||||||||||||| || ||||||||||||||||||||||  |||||||| ||    
T  31273934 agggactatgatcttaaaagtactctttattctgaagggacatt--tatcgaagggactatgtt-ttaagaccattcttaattccgaagggacattaaac 31274030  T
Q  198 caaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaaaaaggagatgaagagaagaa 268  Q
    | |||||  || | | |||||||||||||||||| || |||||||||| ||||||||||||||||||||||    
T  31274031 cgaaaagcgactatggtcttaagaacactcttaaatccgaagggacag-aaaaaggagatgaagagaagaa 31274100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 99 - 268
Target Start/End: Complemental strand, 37264240 - 37264073
Alignment:
Q  99 agggactatgatcttaaac-tattatttattctgaagggacaaaaatatcgaagggactatattcttaagaccattcttaattccgagaggacattatac 197  Q
    ||||||||||||||||||  |||| |||||||||||||||||    ||||||||||||||| || ||||||||||||||||||||||  |||||||| ||    
T  37264240 agggactatgatcttaaaagtattctttattctgaagggacatt--tatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaac 37264143  T
Q  198 caaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaaaaaggagatgaagagaagaa 268  Q
      |||||  || | | |||||||||||||||||| || |||||||||  ||||||||||||||||||||||    
T  37264142 tgaaaagcgactatggtcttaagaacactcttaaatccgaagggaca-taaaaaggagatgaagagaagaa 37264073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 95 - 268
Target Start/End: Original strand, 55252077 - 55252252
Alignment:
Q  95 aaaaagggactatgatcttaa-actattatttattctgaagggacaaaaat-atcgaagggactatattcttaagaccattcttaattccgagaggacat 192  Q
    ||||||||||||||||||||| | |||| ||||||| ||||||||  | || |||||| || |||| || |||||||||||| ||||| |||  ||||||    
T  55252077 aaaaagggactatgatcttaatagtattctttattccgaagggacttatattatcgaatgggctatgtttttaagaccattcctaatttcgaagggacat 55252176  T
Q  193 tataccaaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaaaaaggagatgaagagaagaa 268  Q
    || ||| | ||   || | | ||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  55252177 taaaccgagaatggactatggtcttaagaacactcttaattccgaagggacagaaaaaaggagatgaagagaagaa 55252252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 87 - 270
Target Start/End: Complemental strand, 15805329 - 15805146
Alignment:
Q  87 ttataccaaaaaagggactatgatcttaaactattatttattctgaagggacaaaaat-atcgaagggactatattcttaagaccattcttaattccgag 185  Q
    ||||||| |||||| ||||||| | ||||| |||||||||||| |||||| || |||| ||| ||||||||||  | ||||||  ||||||||||||||     
T  15805329 ttataccgaaaaagagactatggtattaaaatattatttattccgaaggggcataaattatcaaagggactatgctattaagattattcttaattccgaa 15805230  T
Q  186 aggacattataccaaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaaaaaggagatgaagagaagaata 270  Q
     |||||||||||| || ||| |  ||| ||||||||||| || |||||||||||||| || |||||| |||||| ||||||||||    
T  15805229 gggacattataccgaatagagataaaggtcttaagaacagtcataattctgaagggatag-aaaaagtagatgaggagaagaata 15805146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 99 - 248
Target Start/End: Complemental strand, 5271098 - 5270950
Alignment:
Q  99 agggactatgatcttaaac-tattatttattctgaagggacaaaaatatcgaagggactatattcttaagaccattcttaattccgagaggacattatac 197  Q
    ||||||||||||||||||  || | |||||||||||||||||    ||||||||||||||| || ||||||||||||||||||||||  |||||||| ||    
T  5271098 agggactatgatcttaaaagtactctttattctgaagggacatt--tatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaac 5271001  T
Q  198 caaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaa 248  Q
    | |||||  || | | ||||||||||||||||| ||| |||||||||||||    
T  5271000 cgaaaagggactatggtcttaagaacactcttatttccgaagggacagaaa 5270950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 96 - 264
Target Start/End: Complemental strand, 32081807 - 32081638
Alignment:
Q  96 aaaagggactatgatcttaa-actattatttattctgaagggacaaaaat-atcgaagggactatattcttaagaccattcttaattccgagaggacatt 193  Q
    |||||||||||||||||||| | || | ||||||| ||||||||  | || |||||||||||||| || |||||||||||||||||||| |  |||||||    
T  32081807 aaaagggactatgatcttaatagtactctttattccgaagggacttatattatcgaagggactatgtttttaagaccattcttaattccaaagggacatt 32081708  T
Q  194 ataccaaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaaaaaggagatgaagaga 264  Q
    | ||| |||||  || | | | ||||||||||||||||||  ||||||||||||||||||||||| |||||    
T  32081707 aaaccgaaaagggactatggt-ttaagaacactcttaatttcgaagggacagaaaaaaggagatggagaga 32081638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 83 - 204
Target Start/End: Original strand, 8536639 - 8536762
Alignment:
Q  83 gacattataccaaaaaagggactatgatcttaaactattatttattctgaagggaca--aaaatatcgaagggactatattcttaagaccattcttaatt 180  Q
    ||||| ||||| |||| ||||||||||||||||| ||||||||||||| || |||||  |||||||||||| || |||  |||||| |||||||||||||    
T  8536639 gacatcataccgaaaatgggactatgatcttaaaatattatttattcttaaaggacataaaaatatcgaagagattatgctcttaaaaccattcttaatt 8536738  T
Q  181 ccgagaggacattataccaaaaag 204  Q
    | ||  ||||||||||||||||||    
T  8536739 ctgaatggacattataccaaaaag 8536762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 99 - 248
Target Start/End: Complemental strand, 31729066 - 31728918
Alignment:
Q  99 agggactatgatcttaaac-tattatttattctgaagggacaaaaatatcgaagggactatattcttaagaccattcttaattccgagaggacattatac 197  Q
    ||||||||||||||||||  || | |||||||||||||||||    ||||||||||||||| || ||||||||||||||||||| ||  |||||||| ||    
T  31729066 agggactatgatcttaaaagtactttttattctgaagggacatt--tatcgaagggactatgtttttaagaccattcttaattcagaagggacattaaac 31728969  T
Q  198 caaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaa 248  Q
    | |||||  || | | ||||||||||||||||| ||| |||||||||||||    
T  31728968 cgaaaagggactatggtcttaagaacactcttatttccgaagggacagaaa 31728918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 96 - 270
Target Start/End: Original strand, 6943196 - 6943370
Alignment:
Q  96 aaaagggactatgatcttaaac-tattatttattctgaagggacaaaaat-atcgaagggactatattcttaagaccattcttaattccgagaggacatt 193  Q
    |||||||||||||||||||||  || ||||||||| ||| ||||| | || ||||||| |||||| || |||||||| |||||||||| ||  |||||||    
T  6943196 aaaagggactatgatcttaaaaatactatttattccgaatggacatatattatcgaagagactatttttttaagacctttcttaattctgaagggacatt 6943295  T
Q  194 ataccaaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaaaaaggagatgaagagaagaata 270  Q
    ||||| || |   || ||| ||||||||||||||||||||| ||||||||  ||||||||||| || || |||||||    
T  6943296 ataccgaatatggactaaggtcttaagaacactcttaattccgaagggac--aaaaaaggagacgaggataagaata 6943370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 13 - 126
Target Start/End: Original strand, 12878562 - 12878674
Alignment:
Q  13 attctaacatctaacttattcaagaatggaataagaatatattttaagatctatcataatttttcgaagtgacattataccaaaaaagggactatgatct 112  Q
    |||||||||| |||||| | ||||||| ||| |||||| ||||||||||||  || |||||||| |||| ||||||||||  ||||||||||||||||||    
T  12878562 attctaacatgtaacttctccaagaattgaagaagaatgtattttaagatcattcttaattttt-gaagggacattatactgaaaaagggactatgatct 12878660  T
Q  113 taaactattattta 126  Q
    |||| |||||||||    
T  12878661 taaaatattattta 12878674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 99 - 249
Target Start/End: Complemental strand, 5927894 - 5927743
Alignment:
Q  99 agggactatgatcttaaac-tattatttattctgaagggacaaaaat-atcgaagggactatattcttaagaccattcttaattccgagaggacattata 196  Q
    ||||||||||||||||||  || | |||||| |||||||||| | || |||||||||||||| || ||||||||||||||||||||||  |||||||| |    
T  5927894 agggactatgatcttaaaagtactctttattttgaagggacatatattatcgaagggactatgtt-ttaagaccattcttaattccgaagggacattaaa 5927796  T
Q  197 ccaaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaaa 249  Q
    || |||||  || | | ||||||||||||| ||||||| ||| ||||||||||    
T  5927795 ccgaaaagggactatggtcttaagaacacttttaattccgaatggacagaaaa 5927743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 144 - 268
Target Start/End: Complemental strand, 12823521 - 12823397
Alignment:
Q  144 tatcgaagggactatattcttaagaccattcttaattccgagaggacattataccaaaaagaaaccaagatcttaagaacactcttaattctgaagggac 243  Q
    ||||||| ||||||| || ||||||||||| ||||||| ||  |||||||| ||  |||||  |  | | ||||||||||||||||||||| ||||||||    
T  12823521 tatcgaatggactatgtttttaagaccatttttaattctgaagggacattaaactgaaaagggattatggtcttaagaacactcttaattccgaagggac 12823422  T
Q  244 agaaaaaaggagatgaagagaagaa 268  Q
    ||||||||||||||| |||||||||    
T  12823421 agaaaaaaggagatggagagaagaa 12823397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 99 - 248
Target Start/End: Original strand, 8694132 - 8694282
Alignment:
Q  99 agggactatgatcttaaac-tattatttattctgaagggacaaaaat-atcgaagggactatattcttaagaccattcttaattccgagaggacattata 196  Q
    ||||||||||||||||||  || | |||||||| |||||||| | || |||||| ||||||| || |||||||||||||||||||| |  |||||||| |    
T  8694132 agggactatgatcttaaaagtactctttattctaaagggacatatattatcgaatggactatgtt-ttaagaccattcttaattccaaagggacattaaa 8694230  T
Q  197 ccaaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaa 248  Q
     |||||||  || | | ||||||||||||||||||||| |||||||||||||    
T  8694231 tcaaaaagggactatggtcttaagaacactcttaattccgaagggacagaaa 8694282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 214 - 268
Target Start/End: Complemental strand, 42758419 - 42758365
Alignment:
Q  214 tcttaagaacactcttaattctgaagggacagaaaaaaggagatgaagagaagaa 268  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  42758419 tcttaagaacactcttaattccgaagggacagaaaaaaggagatgaagagaagaa 42758365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 144 - 268
Target Start/End: Original strand, 19107075 - 19107197
Alignment:
Q  144 tatcgaagggactatattcttaagaccattcttaattccgagaggacattataccaaaaagaaaccaagatcttaagaacactcttaattctgaagggac 243  Q
    ||||||||||||||| || |||||||||||||||||| |||  |||||||| ||| ||||| ||| | | ||||||||| |||||||| || ||||||||    
T  19107075 tatcgaagggactatgtt-ttaagaccattcttaatttcgaagggacattaaaccgaaaaggaactatggtcttaagaatactcttaagtccgaagggac 19107173  T
Q  244 agaaaaaaggagatgaagagaagaa 268  Q
    || | ||||||||| ||||||||||    
T  19107174 ag-agaaaggagataaagagaagaa 19107197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 99 - 248
Target Start/End: Original strand, 31766290 - 31766440
Alignment:
Q  99 agggactatgatcttaaac-tattatttattctgaagggacaaaaat-atcgaagggactatattcttaagaccattcttaattccgagaggacattata 196  Q
    ||||||||||||||||||  || | ||||||||||||||||| | || |||| ||||||||| || ||||||||||||||||||||||  |||||||| |    
T  31766290 agggactatgatcttaaaagtactttttattctgaagggacatatattatcgcagggactatgtt-ttaagaccattcttaattccgaagggacattaaa 31766388  T
Q  197 ccaaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaa 248  Q
    |  |||||  || | | ||||||||| ||||||||||| ||| |||||||||    
T  31766389 ctgaaaagggactatggtcttaagaatactcttaattccgaaaggacagaaa 31766440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 106 - 248
Target Start/End: Original strand, 34560823 - 34560966
Alignment:
Q  106 atgatcttaaactattatttattctgaagggacaaaaata-tcgaagggactatattcttaagaccattcttaattccgagaggacattataccaaaaag 204  Q
    ||||||||||| ||||||||||||| ||| |||| ||||| | |||||||||||  ||||||||||||||||| |||||| |||| | || ||| |  |     
T  34560823 atgatcttaaaatattatttattctaaagagacataaataattgaagggactatgctcttaagaccattcttatttccgaaaggataataaaccgacgat 34560922  T
Q  205 aaaccaagatcttaagaacactcttaattctgaagggacagaaa 248  Q
     ||  | | ||||||||||||||||||||| |||||||||||||    
T  34560923 gaattatggtcttaagaacactcttaattccgaagggacagaaa 34560966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 96 - 269
Target Start/End: Complemental strand, 13065483 - 13065310
Alignment:
Q  96 aaaagggactatgatcttaaac-tattatttattctgaagggacaaaaat-atcgaagggactatattcttaagaccattcttaattccgagaggacatt 193  Q
    |||||| ||||||||||||||  |  ||||||||  ||||||||| | || ||||||||| |||| || |||||||| |||||||||||||  |||||||    
T  13065483 aaaaggcactatgatcttaaaagtcatatttatttcgaagggacatacattatcgaaggggctatgtttttaagacctttcttaattccgaagggacatt 13065384  T
Q  194 ataccaaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaaaaaggagatgaagagaagaat 269  Q
    || || || ||  || ||| ||||||||||||||||| ||   |||||||||||||||  |||||| |||||||||    
T  13065383 atgccgaatagggactaaggtcttaagaacactcttattttcaaagggacagaaaaaa--agatgaggagaagaat 13065310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 95 - 270
Target Start/End: Original strand, 23093530 - 23093704
Alignment:
Q  95 aaaaagggactatgatcttaaactattatttattctgaagggacaaaaat-atcgaagggactatattcttaagaccattcttaattccgagaggacatt 193  Q
    ||||||| ||||| |||||||| || | |||||| |||||||| |  ||| ||| || ||||||| ||||||||||| ||||||||| |||  |||||||    
T  23093530 aaaaaggaactataatcttaaa-tactctttattttgaagggaaatgaattatcaaatggactatgttcttaagacctttcttaatttcgaatggacatt 23093628  T
Q  194 ataccaaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaaaaaggagatgaagagaagaata 270  Q
    ||||  || ||  || ||| ||||||||| ||||||||||  ||||||||| |||| | ||||||||||||||||||    
T  23093629 atacggaatagggactaaggtcttaagaaaactcttaatttcgaagggaca-aaaataagagatgaagagaagaata 23093704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 86 - 233
Target Start/End: Original strand, 39319946 - 39320092
Alignment:
Q  86 attataccaaaaaagggactatgatcttaaactattatttattctgaagggacaaaaat-atcgaagggactatattcttaagaccattcttaattccga 184  Q
    |||||||| |||||||||| ||||||||||| |||||||| |||| | | |||| |||| || |||||||||||  ||||||||||||||||  ||| ||    
T  39319946 attataccgaaaaagggaccatgatcttaaaatattattt-ttctaacgagacataaataattgaagggactatgctcttaagaccattctttgttcaga 39320044  T
Q  185 gaggacattataccaaaaagaaaccaagatcttaagaacactcttaatt 233  Q
     | |||| || ||| |||||| || | ||||||||||||||||||||||    
T  39320045 -aagacaataaaccgaaaagagactatgatcttaagaacactcttaatt 39320092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 187 - 267
Target Start/End: Original strand, 55150094 - 55150173
Alignment:
Q  187 ggacattataccaaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaaaaaggagatgaagagaaga 267  Q
    ||||||||||||||||||  || | ||| ||||||||||||||||||  ||||||||| ||||||||||||||||||||||    
T  55150094 ggacattataccaaaaagggactatgatattaagaacactcttaatttcgaagggaca-aaaaaaggagatgaagagaaga 55150173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 96 - 250
Target Start/End: Complemental strand, 43477710 - 43477555
Alignment:
Q  96 aaaagggactatgatcttaaactattatttattctgaagggacaaaaat-atcgaagggactatattcttaagaccattcttaattccgagaggacatta 194  Q
    |||| |||||||||||||||| ||||||||||||| || ||||| |||| || |||||| | ||  |||||||||| || |||||||  | |||||||||    
T  43477710 aaaatggactatgatcttaaaatattatttattctaaatggacataaataattgaaggggccatgctcttaagaccctttttaattctaaaaggacatta 43477611  T
Q  195 taccaaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaaaa 250  Q
    |||| || |   || ||| | |||||||||| |||||||| ||| |||||||||||    
T  43477610 taccgaataatgactaaggttttaagaacacccttaattccgaaaggacagaaaaa 43477555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 139 - 268
Target Start/End: Complemental strand, 33468641 - 33468512
Alignment:
Q  139 aaaaatatcgaagggactatattcttaagaccattcttaattccgagaggacattataccaaaaagaaaccaagatc-ttaagaacactcttaattctga 237  Q
    |||||||||||||||| |||   ||||||||||||||||||||  |  |||||||| ||| |||||  || | | || ||||||||||||||||||| ||    
T  33468641 aaaaatatcgaagggattatgaacttaagaccattcttaattctaaagggacattaaaccgaaaagggactatggtctttaagaacactcttaattccga 33468542  T
Q  238 agggacagaaaaaaggagatgaagagaagaa 268  Q
    ||| || | ||||||||||||||||||||||    
T  33468541 aggaac-ggaaaaaggagatgaagagaagaa 33468512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 96 - 248
Target Start/End: Complemental strand, 7902814 - 7902661
Alignment:
Q  96 aaaagggactatgatcttaaactattatttattctgaagggacaaaaat-atcgaagggactatattcttaagaccattcttaattccgagaggacatta 194  Q
    ||||||||| ||||||||||| ||||||||||||| ||| |||  |||| || ||||||||| |  ||||||||||||||||| |||| | |||| | ||    
T  7902814 aaaagggaccatgatcttaaaatattatttattctaaagagacgtaaataattgaagggactgtgctcttaagaccattcttatttccaaaaggataata 7902715  T
Q  195 taccaaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaa 248  Q
     |||||  |   |  | | ||||||||||||||||||||| |||||||||||||    
T  7902714 aaccaacgatggattatggtcttaagaacactcttaattccgaagggacagaaa 7902661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 101 - 248
Target Start/End: Original strand, 41817179 - 41817326
Alignment:
Q  101 ggactatgatcttaaactattatttattctgaagggacaaaaata-tcgaagggactatattcttaagaccattcttaattccgagaggacattatacca 199  Q
    |||||||||||||||| ||||||||||||| ||| |||| ||| | | ||||| |||||  ||||||||||||||||| || ||| |||| | || |||     
T  41817179 ggactatgatcttaaaatattatttattctaaagagacataaacaattgaagg-actatgctcttaagaccattcttattttcgaaaggataataaaccg 41817277  T
Q  200 aaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaa 248  Q
    || |   || | | ||||||||||||||||||||| |||||||||||||    
T  41817278 aagatggactatggtcttaagaacactcttaattccgaagggacagaaa 41817326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 96 - 248
Target Start/End: Original strand, 47575051 - 47575206
Alignment:
Q  96 aaaagggactatgatcttaaactattatttattctgaagggacaaaaat-atcgaagggactatattcttaagaccattcttaattccgagaggacatta 194  Q
    ||||||||||||||||||||| |||| |||||||| ||  |||| |||| || |||||||||||  |||||||||||||||| |||| ||  ||||| ||    
T  47575051 aaaagggactatgatcttaaaatattctttattctaaaatgacataaataattgaagggactatgctcttaagaccattcttgattctgaagggacaata 47575150  T
Q  195 taccaaaaagaaac--caagatcttaagaacactcttaattctgaagggacagaaa 248  Q
    || | | |||  ||   | | ||||||||||||||||||||  |||||||||||||    
T  47575151 tatcgacaagggactatatggtcttaagaacactcttaatttcgaagggacagaaa 47575206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 115
Target Start/End: Complemental strand, 42758516 - 42758414
Alignment:
Q  13 attctaacatctaacttattcaagaatggaataagaatatatttt-aagatctatcataatttttcgaagtgacattataccaaaaaagggactatgatc 111  Q
    ||||||||||||||||| || |||||| ||| |||||| |||||| ||||||  || ||||||| ||||| ||||||||||| ||||| |||||||| ||    
T  42758516 attctaacatctaacttcttgaagaatcgaagaagaatttatttttaagatcgttcttaatttt-cgaagggacattataccgaaaaatggactatggtc 42758418  T
Q  112 ttaa 115  Q
    ||||    
T  42758417 ttaa 42758414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 163 - 250
Target Start/End: Original strand, 47244625 - 47244712
Alignment:
Q  163 ttaagaccattcttaattccgagaggacattataccaaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaaaa 250  Q
    |||||| |||||||||||||||  |||||||| ||| ||||| ||| |   ||||||||||||||||||||  |||||||||||||||    
T  47244625 ttaagatcattcttaattccgaagggacattaaaccgaaaaggaactatagtcttaagaacactcttaatttcgaagggacagaaaaa 47244712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 96 - 248
Target Start/End: Complemental strand, 3997768 - 3997612
Alignment:
Q  96 aaaagggactatgatcttaaactattatttattctga---agggacaaaaata-tcgaagggactatattcttaagaccattcttaattccgagaggaca 191  Q
    ||||||||| ||||||||||| ||||||||||||| |   || |||| ||||| | |||||||||||  ||||||||||||||||| |||||| |||| |    
T  3997768 aaaagggaccatgatcttaaaatattatttattctaattaagagacataaataattgaagggactatgctcttaagaccattcttatttccgaaaggata 3997669  T
Q  192 ttataccaaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaa 248  Q
     || ||| |  |   || |   ||||||||||||||||||||| |||||||||||||    
T  3997668 ataaaccgatgatggactatagtcttaagaacactcttaattccgaagggacagaaa 3997612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 144 - 268
Target Start/End: Original strand, 19102444 - 19102567
Alignment:
Q  144 tatcgaagggactatattcttaagaccatt-cttaattccgagaggacattataccaaaaagaaaccaagatcttaagaacactcttaattctgaaggga 242  Q
    ||||||||||||||| || ||||||||||| |||||||||||  |||||||| ||| |||||  || |   ||||||||  ||||||| ||||||| |||    
T  19102444 tatcgaagggactatgtt-ttaagaccatttcttaattccgaatggacattaaaccgaaaagggactatagtcttaagattactcttacttctgaaagga 19102542  T
Q  243 cagaaaaaaggagatgaagagaagaa 268  Q
    |||||||  |||||||||||||||||    
T  19102543 cagaaaag-ggagatgaagagaagaa 19102567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 96 - 184
Target Start/End: Complemental strand, 13521689 - 13521601
Alignment:
Q  96 aaaagggactatgatcttaaactattatttattctgaagggacaaaaatatcgaagggactatattcttaagaccattcttaattccga 184  Q
    ||||||||||||||||||||| ||||||||||||| ||  |||| |||||    |||| ||||  |||||||||||||||| |||||||    
T  13521689 aaaagggactatgatcttaaaatattatttattctaaaaagacataaataattgaggggctatgctcttaagaccattcttgattccga 13521601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 217 - 268
Target Start/End: Complemental strand, 1150933 - 1150882
Alignment:
Q  217 taagaacactcttaattctgaagggacagaaaaaaggagatgaagagaagaa 268  Q
    ||||||||||||||||||  || ||| |||||||||||||||||||||||||    
T  1150933 taagaacactcttaattccaaatggatagaaaaaaggagatgaagagaagaa 1150882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 268
Target Start/End: Original strand, 13059994 - 13060047
Alignment:
Q  214 tcttaagaacactcttaattctgaagggacagaaaaaaggagatgaagagaagaa 268  Q
    |||||||| |||||||||||| |||||||||| |||||||||| |||||||||||    
T  13059994 tcttaagatcactcttaattccgaagggacag-aaaaaggagaagaagagaagaa 13060047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 250
Target Start/End: Original strand, 16948527 - 16948565
Alignment:
Q  212 gatcttaagaacactcttaattctgaagggacagaaaaa 250  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  16948527 gatcttaagaacactcttaattccgaagggacagaaaaa 16948565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 147 - 196
Target Start/End: Complemental strand, 33722607 - 33722558
Alignment:
Q  147 cgaagggactatattcttaagaccattcttaattccgagaggacattata 196  Q
    |||| ||||||| |||||||||||||||||||||||||  ||||||||||    
T  33722607 cgaatggactatgttcttaagaccattcttaattccgaagggacattata 33722558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 97 - 181
Target Start/End: Complemental strand, 16595704 - 16595618
Alignment:
Q  97 aaagggactatgatcttaaac-tattatttattctgaagggacaaaaat-atcgaagggactatattcttaagaccattcttaattc 181  Q
    ||||||||||||||||||||  || | ||  |||||||||||||||  | | | |||||||||| ||||||||||||||||||||||    
T  16595704 aaagggactatgatcttaaaaatactcttatttctgaagggacaaattttacctaagggactatgttcttaagaccattcttaattc 16595618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 96 - 181
Target Start/End: Original strand, 40840725 - 40840811
Alignment:
Q  96 aaaagggactatgatcttaaactattatttattctgaagggacaaaaat-atcgaagggactatattcttaagaccattcttaattc 181  Q
    |||| |||||| |||| |||| ||||||||||||| ||| |||| |||| || |||||||||||  |||||||||  ||||||||||    
T  40840725 aaaatggactacgatcctaaaatattatttattctaaagagacataaataattgaagggactatgctcttaagacacttcttaattc 40840811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 147 - 181
Target Start/End: Complemental strand, 55081385 - 55081351
Alignment:
Q  147 cgaagggactatattcttaagaccattcttaattc 181  Q
    |||||||||||| ||||||||||||||||||||||    
T  55081385 cgaagggactatgttcttaagaccattcttaattc 55081351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 13521758 - 13521717
Alignment:
Q  13 attctaacatctaacttattcaagaatggaataagaatatat 54  Q
    ||||||||||||||||| ||||||||| ||| ||||||||||    
T  13521758 attctaacatctaacttcttcaagaattgaagaagaatatat 13521717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 95 - 191
Target Start/End: Complemental strand, 31786134 - 31786037
Alignment:
Q  95 aaaaagggactatgatcttaaactattatttattctgaagggacaaaaat-atcgaagggactatattcttaagaccattcttaattccgagaggaca 191  Q
    |||||| || ||| |||||||| ||||||||||| |||| ||||| |||| ||  ||||||||||  ||| ||||||||| |||||| ||| ||||||    
T  31786134 aaaaagtgattataatcttaaaatattatttattttgaaaggacataaataattaaagggactatgctctgaagaccattattaatttcgacaggaca 31786037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 144 - 196
Target Start/End: Complemental strand, 1150998 - 1150946
Alignment:
Q  144 tatcgaagggactatattcttaagaccattcttaattccgagaggacattata 196  Q
    |||| ||||||||||  |||||||| |||||||||||||||  ||||||||||    
T  1150998 tatcaaagggactatgctcttaagatcattcttaattccgaagggacattata 1150946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 212 - 244
Target Start/End: Complemental strand, 24522947 - 24522915
Alignment:
Q  212 gatcttaagaacactcttaattctgaagggaca 244  Q
    ||||||||||||||||||||||| |||||||||    
T  24522947 gatcttaagaacactcttaattccgaagggaca 24522915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 114; Significance: 8e-58; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 13 - 268
Target Start/End: Original strand, 16833807 - 16834061
Alignment:
Q  13 attctaacatctaacttattcaagaatggaataagaatatattttaagatctatcataatttttcgaagtgacattataccaaaaaagggactatgatct 112  Q
    |||||||| ||||||||  |||||||| ||| |||||||||||| ||||||  ||||||||||  |||| ||||||||||| ||||||| ||||||||||    
T  16833807 attctaacgtctaacttcatcaagaatcgaagaagaatatatttcaagatcattcataatttt--gaagggacattataccgaaaaaggaactatgatct 16833904  T
Q  113 taaactattatttattctgaagg-gacaaaaatatcgaagggactatattcttaagaccattcttaattccgagaggacattataccaaaaagaaaccaa 211  Q
    |||| ||||||||||||  ||||  | ||||||||||||||||||||   |||||||||||||||||||||||  |||||||| | |  ||||  || |     
T  16833905 taaattattatttattccaaaggacataaaaatatcgaagggactatgaacttaagaccattcttaattccgaagggacattaaatcggaaagggactat 16834004  T
Q  212 gatcttaagaacactcttaattctgaagggacagaaaaaaggagatgaagagaagaa 268  Q
    | ||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  16834005 ggtcttaagaacactcttaattccgaagggacagaaaaaaggagatgaagagaagaa 16834061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 13 - 268
Target Start/End: Complemental strand, 23192590 - 23192335
Alignment:
Q  13 attctaacatctaacttattcaagaatggaataagaatatattttaagatctatcataatttttcgaagtgacattataccaaaaaagggactatgatct 112  Q
    |||||||| |||||||| ||||||||| |||||||||||||||||||||||  ||||||||||  |||| ||||||||||| |||| || ||||||||||    
T  23192590 attctaacgtctaacttcttcaagaatcgaataagaatatattttaagatcattcataatttt--gaagggacattataccgaaaatggtactatgatct 23192493  T
Q  113 taaactattatttattctgaaggg-acaaaaatatcgaagggactatattcttaagaccattcttaattccgagaggacatt-ataccaaaaagaaacca 210  Q
    |||| |||||||||||| |||||  | |||||||||||||||||  |   |||||||||||||||||||||||  ||||||| | ||| |||||  || |    
T  23192492 taaattattatttattcggaaggacataaaaatatcgaagggaccgtgaacttaagaccattcttaattccgaatggacatttaaaccgaaaagggacta 23192393  T
Q  211 agatcttaagaacactcttaattctgaagggacagaaaaaaggagatgaagagaagaa 268  Q
     | ||||||||||||||||||||| |||| |||||||||| |||||||||||||||||    
T  23192392 tggtcttaagaacactcttaattccgaagtgacagaaaaagggagatgaagagaagaa 23192335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 13 - 268
Target Start/End: Original strand, 7882317 - 7882572
Alignment:
Q  13 attctaacatctaacttattcaagaatggaataagaatatattttaagatctatcataatttttcgaagtgacattataccaaaaaagggactatgatct 112  Q
    |||||||| |||||||| ||||||||| ||| |||||||||||||||||||  ||||||||||| |||| ||||||||||| |||| |||||||||||||    
T  7882317 attctaacgtctaacttcttcaagaatcgaagaagaatatattttaagatcattcataattttt-gaagggacattataccgaaaa-gggactatgatct 7882414  T
Q  113 taaactattatttattctgaaggg-acaaaaatatcgaagggactatattcttaagaccattcttaattccgagaggacattatacc-aaaaagaaacca 210  Q
    |||| ||||||| |||| |||||  | |||||||||| ||||||| |   |||||||||||||||||||| ||  |||||||||||| ||||||  || |    
T  7882415 taaagtattattcattccgaaggacataaaaatatcggagggactctgaacttaagaccattcttaattctgaagggacattataccgaaaaagggacta 7882514  T
Q  211 agatcttaagaacactcttaattctgaagggacagaaaaaaggagatgaagagaagaa 268  Q
     | |||||||||||||||||||||  |||||||| |||||||||||||||||||||||    
T  7882515 tggtcttaagaacactcttaattccaaagggacataaaaaaggagatgaagagaagaa 7882572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 99 - 268
Target Start/End: Original strand, 25844172 - 25844341
Alignment:
Q  99 agggactatgatcttaaac-tattatttattctgaagggacaaaaatatcgaagggactatattcttaagaccattcttaattccgagaggacattatac 197  Q
    ||||||||||||||||||  || | ||||| |||||||||||    ||||||||||||||| || ||||||||||||||||||||||  |||||||| ||    
T  25844172 agggactatgatcttaaaagtactctttatcctgaagggacatt--tatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaac 25844269  T
Q  198 c-aaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaaaaaggagatgaagagaagaa 268  Q
    | ||||||  || | | |||||||||||||||||| |  |||||||||||||||||||||||||||||||||    
T  25844270 cgaaaaagggactatggtcttaagaacactcttaaattcgaagggacagaaaaaaggagatgaagagaagaa 25844341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 101 - 268
Target Start/End: Complemental strand, 16649310 - 16649143
Alignment:
Q  101 ggactatgatcttaaac-tattatttattctgaagggacaaaaat-atcgaagggactatattcttaagaccattcttaattccgagaggacattatacc 198  Q
    ||||||||||||||||  || | ||||||||||||||||| | || |||||||||||||| || |||||||||||||||||| |||  |||||||| |||    
T  16649310 ggactatgatcttaaaaatactctttattctgaagggacatatattatcgaagggactatgtt-ttaagaccattcttaatttcgaagggacattaaacc 16649212  T
Q  199 aaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaaaaaggagatgaagagaagaa 268  Q
     |||||  || | | ||||||||||||||||||||| ||||||||| ||||||||||||||| |||||||    
T  16649211 gaaaagggactatggtcttaagaacactcttaattccgaagggaca-aaaaaaggagatgaatagaagaa 16649143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 96 - 248
Target Start/End: Original strand, 3094481 - 3094633
Alignment:
Q  96 aaaagggactatgatcttaaactattatttattctgaagggacaaaaatatcgaagggactatattcttaagaccattcttaattccgagaggacattat 195  Q
    |||||||||||||||||||||  ||||||||||| |||| ||   || |||||||||||||||  | |||||||||||||||||| |||  ||||||||     
T  3094481 aaaagggactatgatcttaaaacattatttattccgaagagaatgaattatcgaagggactatgctgttaagaccattcttaatttcgaagggacattaa 3094580  T
Q  196 accaaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaa 248  Q
    ||| |||||  || | | ||||||||||||||||||||| |||||||||||||    
T  3094581 accgaaaagggactatggtcttaagaacactcttaattccgaagggacagaaa 3094633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 144 - 268
Target Start/End: Complemental strand, 39200393 - 39200270
Alignment:
Q  144 tatcgaagggactatattcttaagaccattcttaattccgagaggacattataccaaaaagaaaccaagatcttaagaacactcttaattctgaagggac 243  Q
    ||||||||||||||| || ||||||||||||||||||||||  |||||||| |||||||||  || | | | |||||||||||||||||||  |||||||    
T  39200393 tatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccaaaaagggactatggtattaagaacactcttaattccaaagggac 39200294  T
Q  244 agaaaaaaggagatgaagagaagaa 268  Q
    || ||||||||||||||||||||||    
T  39200293 ag-aaaaaggagatgaagagaagaa 39200270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 99 - 268
Target Start/End: Complemental strand, 33300924 - 33300752
Alignment:
Q  99 agggactatgatcttaaac-tattatttattctgaagggacaaaaat-atcgaagggactatattcttaagaccattcttaattccgagaggacattata 196  Q
    ||||||||||||||||||  || | ||||||| ||||||||| | || |||||||||||||| || |||||||| |||||| ||||||  |||||||| |    
T  33300924 agggactatgatcttaaaagtactctttattccgaagggacatatattatcgaagggactatgtttttaagaccgttcttagttccgaagggacattaaa 33300825  T
Q  197 ccaaaaa-gaaaccaagatcttaagaacactcttaattctgaagggacagaaaaaaggagatgaagagaagaa 268  Q
    ||||||| | ||| | | || |||||||||| ||||||| ||||| ||||||||||||||||||||| |||||    
T  33300824 ccaaaaaaggaactatggtcctaagaacacttttaattccgaaggaacagaaaaaaggagatgaagaaaagaa 33300752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 96 - 268
Target Start/End: Original strand, 38621120 - 38621294
Alignment:
Q  96 aaaagggactatgatcttaa-actattatttattctgaagggacaaaaat-atcgaagggactatattcttaagaccattcttaattccgagaggacatt 193  Q
    |||||||||||||||||||| | || | ||||||| ||||||||  | || ||| |||||||||| || |||||| |||| ||||||| ||  |||||||    
T  38621120 aaaagggactatgatcttaatagtaatctttattccgaagggacttatattatcaaagggactatgtttttaagagcattattaattctgaagggacatt 38621219  T
Q  194 ataccaaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaaaaaggagatgaagagaagaa 268  Q
    | | | |||||  || | |||||||||||||||||||||||| |||| ||| |||||||||||||||||||||||    
T  38621220 aaaacgaaaagggactatgatcttaagaacactcttaattcttaaggaacaaaaaaaaggagatgaagagaagaa 38621294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 99 - 240
Target Start/End: Complemental strand, 17214141 - 17214001
Alignment:
Q  99 agggactatgatcttaaactattatttattctgaagggacaaaaatatcgaagggactatattcttaagaccattcttaattccgagaggacattatacc 198  Q
    |||||||||||||||||| ||||||||||||| ||| |||||| | || |||| ||||||  | ||||||||||||||| |||||| |||||| || |||    
T  17214141 agggactatgatcttaaaatattatttattctaaagagacaaata-attgaagtgactatgctgttaagaccattcttagttccgaaaggacaataaacc 17214043  T
Q  199 aaaaagaaaccaagatcttaagaacactcttaattctgaagg 240  Q
     ||||| ||| | | ||||||||||||||||||||| |||||    
T  17214042 gaaaaggaactatggtcttaagaacactcttaattccgaagg 17214001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 99 - 248
Target Start/End: Original strand, 10140514 - 10140662
Alignment:
Q  99 agggactatgatcttaaac-tattatttattctgaagggacaaaaatatcgaagggactatattcttaagaccattcttaattccgagaggacattatac 197  Q
    ||||||||||||||||||  || | |||||| ||||||||||    ||||||||||||||| || ||||||||||||||||||||||  |||||||| ||    
T  10140514 agggactatgatcttaaaagtactctttattatgaagggacatt--tatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaac 10140611  T
Q  198 caaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaa 248  Q
    | |||||  || | | ||||||||||||||||| ||| |||||||||||||    
T  10140612 cgaaaagggactatggtcttaagaacactcttatttccgaagggacagaaa 10140662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 96 - 247
Target Start/End: Complemental strand, 18784258 - 18784104
Alignment:
Q  96 aaaagggactatgatcttaaactattatttattctgaagggacaaaaat-atcgaagggactatattcttaagaccattcttaattccgagaggacatta 194  Q
    |||||| |||||||||||||| ||||||||||||| ||| |||| |||| || |||||||||||  |||||||||||||||| |||||||  | ||| ||    
T  18784258 aaaaggtactatgatcttaaattattatttattctaaagagacataaataattgaagggactatgctcttaagaccattcttgattccgaatgaacaata 18784159  T
Q  195 tacc--aaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaa 247  Q
    ||||  |||||||    | | ||||||||||||||||||||| ||||||||||||    
T  18784158 taccgaaaaaagactatatggtcttaagaacactcttaattccgaagggacagaa 18784104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 95 - 268
Target Start/End: Complemental strand, 19798683 - 19798509
Alignment:
Q  95 aaaaagggactatgatctt-aaactattatttattctgaagggac-aaaaatatcgaagggactatattcttaagaccattcttaattccgagaggacat 192  Q
    ||||||||||||||||||| | | || | ||||||| ||||||||  | | ||||||||||| ||| || | |||||||||||||||| |||  ||||||    
T  19798683 aaaaagggactatgatcttcatagtactctttattccgaagggacttatattatcgaagggattatgttttgaagaccattcttaatttcgaagggacat 19798584  T
Q  193 tataccaaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaaaaaggagatgaagagaagaa 268  Q
    || | |||||||  || | | ||||||||||||||||||||  |||||||||| ||||||||||||||||||||||    
T  19798583 taaatcaaaaagggactatggtcttaagaacactcttaattacgaagggacag-aaaaaggagatgaagagaagaa 19798509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 99 - 268
Target Start/End: Complemental strand, 47450904 - 47450733
Alignment:
Q  99 agggactatgatcttaaac-tattatttattctgaagggacaaaaat-atcgaagggactatattcttaagaccattcttaattccgagaggacattata 196  Q
    ||||||||||||||||||  || | ||||||| ||||||||| | || ||||||| |||||| || ||||||||||||||||||  ||  || ||||| |    
T  47450904 agggactatgatcttaaaagtactctttattccgaagggacatatattatcgaagagactatgtttttaagaccattcttaattttgaaggggcattaaa 47450805  T
Q  197 ccaaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaaaaaggagatgaagagaagaa 268  Q
    || |||||  || | | |||||| |||||||||||||| ||||||||| |||||||| ||||||||||||||    
T  47450804 ccgaaaagggactatggtcttaaaaacactcttaattccgaagggacataaaaaaggtgatgaagagaagaa 47450733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 99 - 248
Target Start/End: Original strand, 10135746 - 10135894
Alignment:
Q  99 agggactatgatcttaaac-tattatttattctgaagggacaaaaatatcgaagggactatattcttaagaccattcttaattccgagaggacattatac 197  Q
    ||||||||||||||||||  || | |||||| ||||||||||    ||||||||||||||| || ||||||||||||||||||||||  |||||||| ||    
T  10135746 agggactatgatcttaaaagtactctttattatgaagggacatt--tatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaac 10135843  T
Q  198 caaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaa 248  Q
    | |||||  || | | ||||||||| ||||||| ||| |||||||||||||    
T  10135844 cgaaaagggactatggtcttaagaatactcttatttccgaagggacagaaa 10135894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 86 - 248
Target Start/End: Complemental strand, 41097672 - 41097509
Alignment:
Q  86 attataccaaaaaagggactatgatcttaaactattatttattctgaagggacaaaaat-atcgaagggactatattcttaagaccattcttaattccga 184  Q
    |||||||| |||||||||| ||||||||||| ||||||||||||| ||| |||| |||| || |||||||||||  ||||||||||||||||| |||| |    
T  41097672 attataccgaaaaagggaccatgatcttaaaatattatttattctaaagagacataaataattgaagggactatgctcttaagaccattcttatttccaa 41097573  T
Q  185 gaggacattataccaaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaa 248  Q
     |||| | || ||| |  |   |  | | ||||||||||||||||||||| |||||||||||||    
T  41097572 aaggataataaaccgacgatggattatggtcttaagaacactcttaattccgaagggacagaaa 41097509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 214 - 268
Target Start/End: Complemental strand, 39587921 - 39587867
Alignment:
Q  214 tcttaagaacactcttaattctgaagggacagaaaaaaggagatgaagagaagaa 268  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  39587921 tcttaagaacactcttaattccgaagggacagaaaaaaggagatgaagagaagaa 39587867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 86 - 267
Target Start/End: Complemental strand, 39037402 - 39037224
Alignment:
Q  86 attataccaaaaaagggactatgatcttaaactattatttattctgaagggacaaaaat-atcgaagggactatattcttaagaccattcttaattccga 184  Q
    |||||||||||||| ||| |||||||||||| |||||||||||  ||||||||| || | ||  ||| ||||||  |||||| | ||||||||||| |||    
T  39037402 attataccaaaaaaaggattatgatcttaaaatattatttatttcgaagggacataattcataaaagcgactatgctcttaacatcattcttaatttcga 39037303  T
Q  185 gaggacattataccaaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaaaaaggagatgaagagaaga 267  Q
      ||||||    | ||||||   | | |||||||||||||||||||||||||||| || | ||||||| ||||||||||||||    
T  39037302 atggacat----ctaaaaagtctctatgatcttaagaacactcttaattctgaagagataaaaaaaagtagatgaagagaaga 39037224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 99 - 248
Target Start/End: Complemental strand, 51041187 - 51041037
Alignment:
Q  99 agggactatgatcttaaac-tattatttattctgaagggacaaaaat-atcgaagggactatattcttaagaccattcttaattccgagaggacattata 196  Q
    ||||||||||||||||||  || | |||||||| |||| ||| | || |||||||||||||| || ||||||||||||||||||| ||  |||||||| |    
T  51041187 agggactatgatcttaaaagtactctttattctaaaggaacatatattatcgaagggactatgtt-ttaagaccattcttaattctgaagggacattaaa 51041089  T
Q  197 ccaaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaa 248  Q
    || |||||  || | | ||||||||| ||||||||||| |||||||||||||    
T  51041088 ccgaaaagggactatggtcttaagaatactcttaattccgaagggacagaaa 51041037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 86 - 247
Target Start/End: Complemental strand, 8267548 - 8267386
Alignment:
Q  86 attataccaaaaaagggactatgatcttaaactattatttattctgaagggacaaaaat-atcgaagggactatattcttaagaccattcttaattccga 184  Q
    ||||||||  ||||||||| ||||||||||| || |||||||||| ||| ||||  ||| || |||||||||||  ||||||||||||||||| || |||    
T  8267548 attataccgtaaaagggaccatgatcttaaaataatatttattctaaagagacatgaataattgaagggactatgctcttaagaccattcttattttcga 8267449  T
Q  185 gaggacattataccaaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaa 247  Q
     |||||| || ||| || |   || | | ||||||||||| |||||||||||||| |||||||    
T  8267448 aaggacaataaaccgaataaggactatggtcttaagaacattcttaattctgaagagacagaa 8267386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 144 - 270
Target Start/End: Complemental strand, 28434265 - 28434140
Alignment:
Q  144 tatcgaagggactatattcttaagaccattcttaattccgagaggacattataccaaaaagaaaccaagatcttaagaacactcttaattctgaagggac 243  Q
    ||||||| |||||||  | |||||||||||||||||| |||  ||| ||||||||||||| | || | | ||||||||| ||||||||||| ||||||||    
T  28434265 tatcgaatggactatgcttttaagaccattcttaatttcgaagggagattataccaaaaa-agactatgttcttaagaaaactcttaattccgaagggac 28434167  T
Q  244 agaaaaaaggagatgaagagaagaata 270  Q
     |||| |||||||| | ||||||||||    
T  28434166 ggaaataaggagataaggagaagaata 28434140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 99 - 248
Target Start/End: Complemental strand, 26927397 - 26927247
Alignment:
Q  99 agggactatgatcttaaac-tattatttattctgaagggacaaaaat-atcgaagggactatattcttaagaccattcttaattccgagaggacattata 196  Q
    ||||||||||||||||||  || | ||||||||||||||||| | || |||||||||||||| || | |||||||||||||||||| |  ||| |||| |    
T  26927397 agggactatgatcttaaaaatactctttattctgaagggacatatattatcgaagggactatgttgt-aagaccattcttaattccaaagggatattaaa 26927299  T
Q  197 ccaaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaa 248  Q
    || |||||  || | | ||||||||||||||||||||   ||||||||||||    
T  26927298 ccgaaaagggactatggtcttaagaacactcttaatttcaaagggacagaaa 26927247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 101 - 250
Target Start/End: Complemental strand, 40233063 - 40232913
Alignment:
Q  101 ggactatgatcttaaactattatttattctgaagggacaaaaata-tcgaagggactatattcttaagaccattcttaattccgagaggacattatacca 199  Q
    |||||||||||||||| ||||||||||||| ||| |||| ||| | | |||||||||||  |||||||| |||| ||| |||||| |||| | || | |     
T  40233063 ggactatgatcttaaaatattatttattctaaagagacataaacaattgaagggactatgctcttaagatcattattatttccgaaaggataataaatcg 40232964  T
Q  200 aaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaaaa 250  Q
    |  |   || | ||||||||||||||||||||||| |||||||||||||||    
T  40232963 acgatggactatgatcttaagaacactcttaattccgaagggacagaaaaa 40232913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 73 - 178
Target Start/End: Complemental strand, 27311492 - 27311384
Alignment:
Q  73 ttttcgaagtgacattataccaaaaaagggactatgatcttaaac-tattattta-ttctgaagggaca-aaaatatcgaagggactatattcttaagac 169  Q
    ||||||||| |||||||||||  ||||||| | |||||||||||| ||||||||| |||  |||||||| ||| ||||||| |||||||| ||| |||||    
T  27311492 ttttcgaagggacattatacctcaaaagggtcaatgatcttaaacatattatttatttcgaaagggacataaattatcgaaaggactatactctgaagac 27311393  T
Q  170 cattcttaa 178  Q
    |||||||||    
T  27311392 cattcttaa 27311384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 163 - 281
Target Start/End: Original strand, 12260475 - 12260593
Alignment:
Q  163 ttaagaccattcttaattccgagaggacattataccaaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaaaaaggagatgaaga 262  Q
    |||||||||| |||||||| ||  |||||||||||| ||||   || | | |||||| ||||||||||||||  ||||||  | || |||||||||||||    
T  12260475 ttaagaccatccttaattctgaagggacattataccgaaaatggactatggtcttaaaaacactcttaattccaaagggatgggaataaggagatgaaga 12260574  T
Q  263 gaagaataacctgttaaca 281  Q
    ||||||||||  |||||||    
T  12260575 gaagaataactcgttaaca 12260593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 96 - 245
Target Start/End: Original strand, 33055434 - 33055584
Alignment:
Q  96 aaaagggactatgatcttaaactattatttattctgaagggaca-aaaatatcgaagggactatattcttaagaccattcttaattccgagaggacatta 194  Q
    |||| |||||||||||||||| ||||||||||||| ||| |||| |||  || |||||||||||  |||||| ||||||||||  ||||| |||||| ||    
T  33055434 aaaaaggactatgatcttaaaatattatttattctaaagagacataaacaattgaagggactatcctcttaacaccattcttatgtccgaaaggacaata 33055533  T
Q  195 taccaaaaagaaaccaagatcttaagaacactcttaattctgaagggacag 245  Q
     ||| || |   || | | ||||||||||||||| ||||  ||||||||||    
T  33055534 aaccgaatatgtactatggtcttaagaacactctaaatttcgaagggacag 33055584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 147 - 250
Target Start/End: Original strand, 31064367 - 31064471
Alignment:
Q  147 cgaagggactatattcttaagaccattcttaattccgagaggacattataccaaaaagaaaccaagatcttaagaacactc-ttaattctgaagggacag 245  Q
    |||||||||||| |||||||||||||||| ||||||||  ||||||| ||    ||||| || | |||||||||||||||| |||| || |||||||||     
T  31064367 cgaagggactatgttcttaagaccattctcaattccgaagggacattttaaaccaaagagactatgatcttaagaacactctttaaatccgaagggacat 31064466  T
Q  246 aaaaa 250  Q
    |||||    
T  31064467 aaaaa 31064471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 214 - 265
Target Start/End: Original strand, 40166496 - 40166547
Alignment:
Q  214 tcttaagaacactcttaattctgaagggacagaaaaaaggagatgaagagaa 265  Q
    ||||||||||||||||||||| ||||||||| ||||| ||||||| ||||||    
T  40166496 tcttaagaacactcttaattccgaagggacaaaaaaatggagatggagagaa 40166547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 147 - 193
Target Start/End: Complemental strand, 33380612 - 33380566
Alignment:
Q  147 cgaagggactatattcttaagaccattcttaattccgagaggacatt 193  Q
    |||||||||||| |||||||||||||||||||||||||  |||||||    
T  33380612 cgaagggactatgttcttaagaccattcttaattccgaagggacatt 33380566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 131 - 195
Target Start/End: Complemental strand, 2493522 - 2493457
Alignment:
Q  131 gaagggacaaaaat-atcgaagggactatattcttaagaccattcttaattccgagaggacattat 195  Q
    |||||||||||| | | ||||||||||||  ||||||||||||||||||||||||  |||||||||    
T  2493522 gaagggacaaaatttaccgaagggactatgctcttaagaccattcttaattccgaagggacattat 2493457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 147 - 196
Target Start/End: Original strand, 9252744 - 9252793
Alignment:
Q  147 cgaagggactatattcttaagaccattcttaattccgagaggacattata 196  Q
    |||||||||||| |||||||||| ||||||||||||||  ||||||||||    
T  9252744 cgaagggactatgttcttaagactattcttaattccgaacggacattata 9252793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 127 - 196
Target Start/End: Complemental strand, 25661550 - 25661481
Alignment:
Q  127 ttctgaagggacaaaaatatcgaagggactatattcttaagaccattcttaattccgagaggacattata 196  Q
    |||||||||||| ||| |  | ||||||| || |||||||||||||||||||||||||  ||||||||||    
T  25661550 ttctgaagggacgaaatttaccaagggacaatgttcttaagaccattcttaattccgaagggacattata 25661481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 148 - 196
Target Start/End: Complemental strand, 19309292 - 19309244
Alignment:
Q  148 gaagggactatattcttaagaccattcttaattccgagaggacattata 196  Q
    ||||||||||| |||||||||||||| ||||||||||  ||||||||||    
T  19309292 gaagggactatgttcttaagaccattattaattccgaagggacattata 19309244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 147 - 193
Target Start/End: Complemental strand, 24159504 - 24159458
Alignment:
Q  147 cgaagggactatattcttaagaccattcttaattccgagaggacatt 193  Q
    |||||||||||| ||||||||||| |||||||||||||  |||||||    
T  24159504 cgaagggactatgttcttaagaccgttcttaattccgaagggacatt 24159458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 147 - 181
Target Start/End: Complemental strand, 28857746 - 28857712
Alignment:
Q  147 cgaagggactatattcttaagaccattcttaattc 181  Q
    |||||||||||| ||||||||||||||||||||||    
T  28857746 cgaagggactatgttcttaagaccattcttaattc 28857712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 96 - 184
Target Start/End: Original strand, 40166403 - 40166492
Alignment:
Q  96 aaaagggactatgatcttaa-actattatttattctgaagggacaaaaat-atcgaagggactatattcttaagaccattcttaattccga 184  Q
    |||||||||||||||||||| | || | ||||||| ||||||||  | || ||| |||||||||| || ||||||||||||||||||||||    
T  40166403 aaaagggactatgatcttaatagtact-tttattccgaagggacttatattatcaaagggactatgtttttaagaccattcttaattccga 40166492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 249
Target Start/End: Complemental strand, 47381101 - 47381068
Alignment:
Q  216 ttaagaacactcttaattctgaagggacagaaaa 249  Q
    ||||||||||||||||||||||| ||||||||||    
T  47381101 ttaagaacactcttaattctgaatggacagaaaa 47381068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 196
Target Start/End: Original strand, 36725124 - 36725168
Alignment:
Q  152 ggactatattcttaagaccattcttaattccgagaggacattata 196  Q
    ||||| ||||||||||||||||||||||| |||  ||||||||||    
T  36725124 ggactttattcttaagaccattcttaatttcgaagggacattata 36725168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 107; Significance: 1e-53; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 13 - 268
Target Start/End: Original strand, 4396 - 4650
Alignment:
Q  13 attctaacatctaacttattcaagaatggaataagaatatattttaagatctatcataatttttcgaagtgacattataccaaaaaagggactatgatct 112  Q
    |||||||| |||||||| ||||||||| ||| |||||||||||||||||||  |||||  |||| |||| | |||| |||| ||||||||||||||||||    
T  4396 attctaacgtctaacttcttcaagaatcgaagaagaatatattttaagatcattcata--tttttgaaggggcattgtaccgaaaaagggactatgatct 4493  T
Q  113 taaactattatttattctgaagg-gacaaaaatatcgaagggactatattcttaagaccattcttaattccgagaggaca-ttataccaaaaagaaacca 210  Q
    |||| |||||||||||| |||||  | ||||||||||||||||||||   |||||||||||||||||||||||  ||||| ||| ||| || ||  || |    
T  4494 taaattattatttattccgaaggacataaaaatatcgaagggactatgaacttaagaccattcttaattccgaagggacatttaaaccgaatagggacta 4593  T
Q  211 agatcttaagaacactcttaattctgaagggacagaaaaaaggagatgaagagaagaa 268  Q
     | ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  4594 tggtcttaagaacactcttaattccgaagggacag-aaaaaggagatgaagagaagaa 4650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 99 - 281
Target Start/End: Complemental strand, 443621 - 443439
Alignment:
Q  99 agggactatgatcttaaac-tattatttattctgaagggacaaaaat-atcgaagggactatattcttaagaccattcttaattccgagaggacattata 196  Q
    |||||||||||| |||||  || | ||||||||||||||||| | || |||||||||||||| || ||||||||||||||||||||||  | |||||| |    
T  443621 agggactatgattttaaaagtactctttattctgaagggacatatattatcgaagggactatgtt-ttaagaccattcttaattccgaaggaacattaaa 443523  T
Q  197 ccaaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaaaaaggagatgaagagaagaataacctgttaaca 281  Q
    |  |||||  || | | ||||||||||||| ||||||| ||||||||| ||||||||||||||||| |||||  || ||||||||    
T  443522 ctgaaaagggactatggtcttaagaacactattaattccgaagggaca-aaaaaaggagatgaagacaagaaagacttgttaaca 443439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 103; Significance: 3e-51; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 13 - 268
Target Start/End: Original strand, 39518732 - 39518985
Alignment:
Q  13 attctaacatctaacttattcaagaatggaataagaatatattttaagatctatcataatttttcgaagtgacattataccaaaaaagggactatgatct 112  Q
    |||||||| |||||||| ||||||||| ||| |||||||||||||||||||  |||||  |||| |||| |||||||||||  |||||||||||||||||    
T  39518732 attctaacgtctaacttcttcaagaatcgaagaagaatatattttaagatcattcata--tttttgaagggacattatacc-gaaaagggactatgatct 39518828  T
Q  113 taaactattatttattctgaagg-gacaaaaatatcgaagggactatattcttaagaccattcttaattccgagaggaca-ttataccaaaaagaaacca 210  Q
    |||| |||||||||||| |||||  | ||||||||||||||||||||   |||||||||||||||||||||||  ||||| ||| ||| || ||  || |    
T  39518829 taaattattatttattccgaaggacataaaaatatcgaagggactatgaacttaagaccattcttaattccgaagggacatttaaaccgaatagggacta 39518928  T
Q  211 agatcttaagaacactcttaattctgaagggacagaaaaaaggagatgaagagaagaa 268  Q
     | |||||||||||||||| |||| |||||||||| ||||||||||||||||||||||    
T  39518929 tggtcttaagaacactctttattccgaagggacag-aaaaaggagatgaagagaagaa 39518985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 13 - 268
Target Start/End: Original strand, 39523371 - 39523624
Alignment:
Q  13 attctaacatctaacttattcaagaatggaataagaatatattttaagatctatcataatttttcgaagtgacattataccaaaaaagggactatgatct 112  Q
    |||||||| |||||||| ||||||||| ||| |||||||||||||||||||  |||||  |||| |||| |||||||||||  |||||||||||||||||    
T  39523371 attctaacgtctaacttcttcaagaatcgaagaagaatatattttaagatcattcata--tttttgaagggacattatacc-gaaaagggactatgatct 39523467  T
Q  113 taaactattatttattctgaagg-gacaaaaatatcgaagggactatattcttaagaccattcttaattccgagaggaca-ttataccaaaaagaaacca 210  Q
    |||| |||||||||||| |||||  | ||||||||||||||||||||   |||||||||||||||||||||||  ||||| ||| ||| || ||  || |    
T  39523468 taaattattatttattccgaaggacataaaaatatcgaagggactatgaacttaagaccattcttaattccgaagggacatttaaaccgaatagggacta 39523567  T
Q  211 agatcttaagaacactcttaattctgaagggacagaaaaaaggagatgaagagaagaa 268  Q
     | |||||||||||||||| |||| |||||||||| ||||||||||||||||||||||    
T  39523568 tggtcttaagaacactctttattccgaagggacag-aaaaaggagatgaagagaagaa 39523624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 66 - 268
Target Start/End: Original strand, 4872289 - 4872488
Alignment:
Q  66 tcataatttttcgaagtgacattataccaaaaaagggactatgatcttaaactattatttattctgaaggg-acaaaaatatcgaagggactatattctt 164  Q
    ||||||||||  |||| ||||||||||| |||| |||| |||||||||||  |||||||||||  |||||  | ||||||||||||||||||||   |||    
T  4872289 tcataatttt--gaagagacattataccgaaaa-gggagtatgatcttaat-tattatttattgcgaaggacataaaaatatcgaagggactatgaactt 4872384  T
Q  165 aagaccattcttaattccgagaggacattataccaaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaaaaaggagatgaagaga 264  Q
    |||| |||||| ||||| || | ||||||| ||| |||||  || | | ||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  4872385 aagatcattctgaattctgaaaagacattaaaccgaaaagggactatggtcttaagaacactcttaattccgaagggacagaaaaaaggagatgaagaga 4872484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 96 - 248
Target Start/End: Complemental strand, 36941967 - 36941815
Alignment:
Q  96 aaaagggactatgatcttaaactattatttattctgaagggacaaaaatatcgaagggactatattcttaagaccattcttaattccgagaggacattat 195  Q
    |||||||||||||||||||||  ||||||||||| |||| ||   || |||||||||||||||  | ||||||||||||||||||||||  ||||||||     
T  36941967 aaaagggactatgatcttaaaacattatttattccgaagagaatgaattatcgaagggactatgctgttaagaccattcttaattccgaagggacattaa 36941868  T
Q  196 accaaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaa 248  Q
    ||| |||||  || | ||||||||||||||||||||||| |||||||||||||    
T  36941867 accgaaaagggactatgatcttaagaacactcttaattccgaagggacagaaa 36941815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 99 - 268
Target Start/End: Complemental strand, 9726431 - 9726262
Alignment:
Q  99 agggactatgatcttaaac-tattatttattctgaagggacaaaaat-atcgaagggactatattcttaagaccattcttaattccgagaggacattata 196  Q
    ||||||||||||||||||  || | ||||||| ||||||||| | || |||||||||||||| || ||||||||||||||||||| ||  |||||||| |    
T  9726431 agggactatgatcttaaaagtactctttattccgaagggacatatattatcgaagggactatgtt-ttaagaccattcttaattctgaagggacattaaa 9726333  T
Q  197 ccaaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaaaaaggagatgaagagaagaa 268  Q
    || |||||  || | | ||||||||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  9726332 ccgaaaagggactacggtcttaagaacactcttaattccgaagggacaga-aaaaggagatgaagagaagaa 9726262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 96 - 248
Target Start/End: Original strand, 557088 - 557240
Alignment:
Q  96 aaaagggactatgatcttaaactattatttattctgaagggacaaaaatatcgaagggactatattcttaagaccattcttaattccgagaggacattat 195  Q
    ||||||||||||||| |||||  ||||||||||| |||| ||   |  |||| |||||||||| |||||||||||||||||||||||||  ||||||||     
T  557088 aaaagggactatgatattaaaacattatttattccgaagagaatgatttatcaaagggactatgttcttaagaccattcttaattccgaagggacattaa 557187  T
Q  196 accaaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaa 248  Q
    ||| |||||  || | | ||||||||||||||||||||| |||||||||||||    
T  557188 accgaaaagggactatggtcttaagaacactcttaattccgaagggacagaaa 557240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 96 - 248
Target Start/End: Original strand, 561860 - 562012
Alignment:
Q  96 aaaagggactatgatcttaaactattatttattctgaagggacaaaaatatcgaagggactatattcttaagaccattcttaattccgagaggacattat 195  Q
    ||||||||||||||| |||||  ||||||||||| |||| ||   |  |||| |||||||||| |||||||||||||||||||||||||  ||||||||     
T  561860 aaaagggactatgatattaaaacattatttattccgaagagaatgatttatcaaagggactatgttcttaagaccattcttaattccgaagggacattaa 561959  T
Q  196 accaaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaa 248  Q
    ||| |||||  || | | ||||||||||||||||||||| |||||||||||||    
T  561960 accgaaaagggactatggtcttaagaacactcttaattccgaagggacagaaa 562012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 99 - 268
Target Start/End: Complemental strand, 37248480 - 37248309
Alignment:
Q  99 agggactatgatcttaaac-tattatttattctgaagggacaaaaat-atcgaagggactatattcttaagaccattcttaattccgagaggacattata 196  Q
    ||||||||||||||||||  || | ||||||||||||||||| | || |||||||||||||| || |||||| |||||||||||| ||  |||||||| |    
T  37248480 agggactatgatcttaaaagtactctttattctgaagggacatatattatcgaagggactatgtttttaagatcattcttaattctgaagggacattaaa 37248381  T
Q  197 cc-aaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaaaaaggagatgaagagaagaa 268  Q
    || ||||||  || | | |||||||||||||||||| || ||||||||||| |||||||||||||||||||||    
T  37248380 ccgaaaaagggactatggtcttaagaacactcttaaatccgaagggacaga-aaaaggagatgaagagaagaa 37248309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 99 - 268
Target Start/End: Original strand, 40148315 - 40148484
Alignment:
Q  99 agggactatgatcttaaac-tattatttattctgaagggacaaaaat-atcgaagggactatattcttaagaccattcttaattccgagaggacattata 196  Q
    |||||| |||||||||||  || | ||||||||||||||||| | || |||||||||||||| || ||||||||||||||||||| ||  |||||||| |    
T  40148315 agggacaatgatcttaaaagtactttttattctgaagggacatatattatcgaagggactatgtt-ttaagaccattcttaattctgaagggacattaaa 40148413  T
Q  197 ccaaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaaaaaggagatgaagagaagaa 268  Q
    || |||||  || | | ||||||||||||||||||||| |||||||||| |||||| |||||||||||||||    
T  40148414 ccgaaaagggactatggtcttaagaacactcttaattccgaagggacag-aaaaagaagatgaagagaagaa 40148484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 97 - 268
Target Start/End: Original strand, 23688511 - 23688683
Alignment:
Q  97 aaagggactatgatcttaaactattatttattctgaagggacaaaaat-atcgaagggactatattcttaagaccattcttaattccgagaggacattat 195  Q
    ||||||| | |||||||||| || | ||||||| ||||||||| | || |||||| ||| |||  |||||||||||||||||||||||   |||||||||    
T  23688511 aaagggattgtgatcttaaaatagtctttattccgaagggacatatatcatcgaaaggaatatgctcttaagaccattcttaattccggacggacattat 23688610  T
Q  196 accaaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaaaaaggagatgaagagaagaa 268  Q
    ||| |||||   | | | |||||||||| |||||||||  ||||||||| |||||||||||||||||||||||    
T  23688611 accgaaaaggttctatggtcttaagaactctcttaatttcgaagggacataaaaaaggagatgaagagaagaa 23688683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 96 - 248
Target Start/End: Complemental strand, 36937213 - 36937061
Alignment:
Q  96 aaaagggactatgatcttaaactattatttattctgaagggacaaaaatatcgaagggactatattcttaagaccattcttaattccgagaggacattat 195  Q
    |||||||||||||||||||||  ||||||||||| |||| ||   || |||||||||||||||  | ||||||||||||||||||||||  ||||||||     
T  36937213 aaaagggactatgatcttaaaacattatttattccgaagagaatgaattatcgaagggactatgctgttaagaccattcttaattccgaagggacattaa 36937114  T
Q  196 accaaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaa 248  Q
    ||| |||||  || | | ||||||||  ||||||||||| |||||||||||||    
T  36937113 accgaaaagggactatggtcttaagattactcttaattccgaagggacagaaa 36937061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 99 - 248
Target Start/End: Original strand, 26667692 - 26667842
Alignment:
Q  99 agggactatgatcttaaac-tattatttattctgaagggacaaaaat-atcgaagggactatattcttaagaccattcttaattccgagaggacattata 196  Q
    ||||||||||||||||||  || | ||||||||||||||||| | || ||| |||||||||| || ||||||||||||||||||||||  |||||||| |    
T  26667692 agggactatgatcttaaaagtactctttattctgaagggacatatattatcaaagggactatgtt-ttaagaccattcttaattccgaagggacattaaa 26667790  T
Q  197 ccaaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaa 248  Q
    || |||||  || | | ||||||||||||||||||||| |||||||||||||    
T  26667791 ccgaaaagggactatggtcttaagaacactcttaattccgaagggacagaaa 26667842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 99 - 248
Target Start/End: Original strand, 26939289 - 26939439
Alignment:
Q  99 agggactatgatcttaaac-tattatttattctgaagggacaaaaat-atcgaagggactatattcttaagaccattcttaattccgagaggacattata 196  Q
    ||||||||||||||||||  || | ||||||||||||||||| | || ||| |||||||||| || ||||||||||||||||||||||  |||||||| |    
T  26939289 agggactatgatcttaaaagtactctttattctgaagggacatatattatcaaagggactatgtt-ttaagaccattcttaattccgaagggacattaaa 26939387  T
Q  197 ccaaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaa 248  Q
    || |||||  || | | ||||||||||||||||||||| |||||||||||||    
T  26939388 ccgaaaagggactatggtcttaagaacactcttaattccgaagggacagaaa 26939439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 99 - 248
Target Start/End: Complemental strand, 29167649 - 29167499
Alignment:
Q  99 agggactatgatcttaaac-tattatttattctgaagggacaaaaat-atcgaagggactatattcttaagaccattcttaattccgagaggacattata 196  Q
    ||||||||||||||||||  || | ||||||||||||||||| | || ||||||||||| || || ||||||||||||||||||||||  |||||||| |    
T  29167649 agggactatgatcttaaaagtactctttattctgaagggacatatattatcgaagggacaatgtt-ttaagaccattcttaattccgaagggacattaaa 29167551  T
Q  197 ccaaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaa 248  Q
    || |||||  || | | ||||||||||||||||||||| |||||||||||||    
T  29167550 ccgaaaagggactatggtcttaagaacactcttaattccgaagggacagaaa 29167499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 86 - 248
Target Start/End: Complemental strand, 13301202 - 13301041
Alignment:
Q  86 attataccaaaaaagggactatgatcttaaactattatttattctgaagggacaaaaatatcgaagggactatattcttaagaccattcttaattccgag 185  Q
    |||||||| |||||||||| ||||||||||| ||||||||||||| ||| |||||| | || |||||||||||  ||||||||||||||||| ||||||     
T  13301202 attataccgaaaaagggaccatgatcttaaaatattatttattctaaagagacaaata-attgaagggactatgctcttaagaccattcttatttccgaa 13301104  T
Q  186 aggacattataccaaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaa 248  Q
    |||| | || ||| |  |   || | | ||||||||||||||||||||| |||||||||||||    
T  13301103 aggataataaaccgacgatggactatggtcttaagaacactcttaattccgaagggacagaaa 13301041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 99 - 248
Target Start/End: Original strand, 7452174 - 7452322
Alignment:
Q  99 agggactatgatcttaaac-tattatttattctgaagggacaaaaatatcgaagggactatattcttaagaccattcttaattccgagaggacattatac 197  Q
    ||||||||||||||||||  || | |||||||||||||||||    ||||||||||||||| || ||||||||||||||||||||||  |||||||| ||    
T  7452174 agggactatgatcttaaaagtactctttattctgaagggacatt--tatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaac 7452271  T
Q  198 caaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaa 248  Q
    | |||||  || | | ||||||||| ||||||| ||| |||||||||||||    
T  7452272 cgaaaagggacaatggtcttaagaaaactcttatttccgaagggacagaaa 7452322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 86 - 248
Target Start/End: Original strand, 31731918 - 31732081
Alignment:
Q  86 attataccaaaaaagggactatgatcttaaactattatttattctgaagggacaaaaat-atcgaagggactatattcttaagaccattcttaattccga 184  Q
    |||||||| |||||||||| ||||||||||| ||||||||||||| ||| |||| |||| || |||||| ||||  ||||||||||||||||| ||| ||    
T  31731918 attataccgaaaaagggaccatgatcttaaaatattatttattctaaagagacataaataattgaaggggctatgctcttaagaccattcttatttctga 31732017  T
Q  185 gaggacattataccaaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaa 248  Q
     |||| | || ||||   |   || | | ||||||||||||||||||||| |||||||||||||    
T  31732018 aaggataataaaccagcgatggactatggtcttaagaacactcttaattccgaagggacagaaa 31732081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 99 - 248
Target Start/End: Original strand, 36424057 - 36424207
Alignment:
Q  99 agggactatgatcttaaac-tattatttattctgaagggacaaaaat-atcgaagggactatattcttaagaccattcttaattccgagaggacattata 196  Q
    ||||||||||||||||||  || | ||||||||||||||||| | || ||||||| || ||| || ||||||||||||||||||||||  |||||||| |    
T  36424057 agggactatgatcttaaaagtactctttattctgaagggacatatattatcgaagagattatgtt-ttaagaccattcttaattccgaagggacattaaa 36424155  T
Q  197 ccaaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaa 248  Q
    || |||||  || | | ||||||||||| ||||||||| |||||||||||||    
T  36424156 ccgaaaagggactatggtcttaagaacagtcttaattccgaagggacagaaa 36424207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 96 - 270
Target Start/End: Complemental strand, 23757494 - 23757319
Alignment:
Q  96 aaaagggactatgatcttaaac-tattatttattctgaagggacaaaaat-atcgaagggactatattcttaagaccattcttaattccgagaggacatt 193  Q
    |||||||||||||||||||||  || |||||||||  |||||||| | || |||||||||||||| || |||||||| ||| |||||||||   ||||||    
T  23757494 aaaagggactatgatcttaaaagtactatttattcccaagggacatacattatcgaagggactatgtttttaagacctttcataattccgaagtgacatt 23757395  T
Q  194 ataccaaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaaaaaggagatgaagagaagaata 270  Q
    ||||| ||  |  || ||| ||||||||| ||||||| ||| |||||| ||| |||||||| |||| ||||||||||    
T  23757394 ataccgaattgggactaaggtcttaagaaaactcttatttccgaaggggcag-aaaaaggatatgaggagaagaata 23757319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 96 - 270
Target Start/End: Complemental strand, 23822950 - 23822775
Alignment:
Q  96 aaaagggactatgatcttaaac-tattatttattctgaagggacaaaaat-atcgaagggactatattcttaagaccattcttaattccgagaggacatt 193  Q
    |||||||||||||||||||||  || |||||||||  |||||||| | || |||||||||||||| || |||||||| ||| |||||||||   ||||||    
T  23822950 aaaagggactatgatcttaaaagtactatttattcccaagggacatacattatcgaagggactatgtttttaagacctttcataattccgaagtgacatt 23822851  T
Q  194 ataccaaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaaaaaggagatgaagagaagaata 270  Q
    ||||| ||  |  || ||| ||||||||| ||||||| ||| |||||| ||| |||||||| |||| ||||||||||    
T  23822850 ataccgaattgggactaaggtcttaagaaaactcttatttccgaaggggcag-aaaaaggatatgaggagaagaata 23822775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 103 - 249
Target Start/End: Original strand, 36429133 - 36429280
Alignment:
Q  103 actatgatcttaaac-tattatttattctgaagggacaaaaat-atcgaagggactatattcttaagaccattcttaattccgagaggacattataccaa 200  Q
    ||||||||||||||  || | ||||||||||||||||| | || ||||| | |||||| || ||||||||||||||||||||||  |||||||| | | |    
T  36429133 actatgatcttaaaaatactctttattctgaagggacatatattatcgacgagactatgtt-ttaagaccattcttaattccgaagggacattaaaacga 36429231  T
Q  201 aaagaaaccaagatcttaagaacactcttaattctgaagggacagaaaa 249  Q
    ||||  || | | ||||||||||||||||||||| ||||||||||||||    
T  36429232 aaagggactatggtcttaagaacactcttaattccgaagggacagaaaa 36429280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 99 - 248
Target Start/End: Complemental strand, 37549828 - 37549678
Alignment:
Q  99 agggactatgatcttaaac-tattatttattctgaagggacaaaaat-atcgaagggactatattcttaagaccattcttaattccgagaggacattata 196  Q
    ||||||||||||||||||  || | ||||||||||||||||| | || |||||| ||||||| || | ||||||||||||||||||||  |||||||| |    
T  37549828 agggactatgatcttaaaagtactctttattctgaagggacatatattatcgaatggactatgtt-tcaagaccattcttaattccgaagggacattaaa 37549730  T
Q  197 ccaaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaa 248  Q
    || |||||  || | | ||||||||||||||||| |||  ||||||||||||    
T  37549729 ccgaaaagggactatggtcttaagaacactcttatttccaaagggacagaaa 37549678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 213 - 281
Target Start/End: Complemental strand, 15414455 - 15414388
Alignment:
Q  213 atcttaagaacactcttaattctgaagggacagaaaaaaggagatgaagagaagaataacctgttaaca 281  Q
    |||||||||||||| ||| ||||||||||||||| |||||||||||| |||||||||||| ||||||||    
T  15414455 atcttaagaacacttttacttctgaagggacaga-aaaaggagatgaggagaagaataacttgttaaca 15414388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 96 - 268
Target Start/End: Complemental strand, 6513596 - 6513422
Alignment:
Q  96 aaaagggactatgatcttaa-actattatttattctgaagggacaaaaat-atcgaagggactatattcttaagaccattcttaattccgagaggacatt 193  Q
    |||||||||||||||||||| |  | | ||||||| ||||||||  | || |||| ||||||||| || |||||| ||||||||||| |||  |||||||    
T  6513596 aaaagggactatgatcttaatagcactctttattccgaagggacttatattatcggagggactatgtttttaagatcattcttaatttcgaagggacatt 6513497  T
Q  194 ataccaaaa-agaaaccaagatcttaagaacactcttaattctgaagggacagaaaaaaggagatgaagagaagaa 268  Q
    | ||| ||| || ||    | |||||| |||||||||||||||||||||||||| ||||||||||||||| |||||    
T  6513496 aaaccgaaataggaaatgtggtcttaataacactcttaattctgaagggacaga-aaaaggagatgaagaaaagaa 6513422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 99 - 248
Target Start/End: Complemental strand, 37652626 - 37652476
Alignment:
Q  99 agggactatgatcttaaac-tattatttattctgaagggacaaaaat-atcgaagggactatattcttaagaccattcttaattccgagaggacattata 196  Q
    ||||||||||||||||||  |  | ||||||||||||||||| | || |||||| ||||||| || | ||||||||||||||||||||  |||||||| |    
T  37652626 agggactatgatcttaaaagtgctctttattctgaagggacatatattatcgaatggactatgtt-tcaagaccattcttaattccgaagggacattaaa 37652528  T
Q  197 ccaaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaa 248  Q
    || |||||  || | | ||||||||||||||||| |||  ||||||||||||    
T  37652527 ccgaaaagggactatggtcttaagaacactcttatttccaaagggacagaaa 37652476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 214 - 268
Target Start/End: Complemental strand, 20180718 - 20180664
Alignment:
Q  214 tcttaagaacactcttaattctgaagggacagaaaaaaggagatgaagagaagaa 268  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||||||| |||||    
T  20180718 tcttaagaacactcttaattccgaagggatagaaaaaaggagatgaagaaaagaa 20180664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 96 - 184
Target Start/End: Complemental strand, 12044840 - 12044751
Alignment:
Q  96 aaaagggactatgatcttaaactattatttattctgaagggacaaaaat-atcgaagggactatattcttaagaccattcttaattccga 184  Q
    ||||||||||||||||||||| |||| |||||||| || ||||| |||| || |||||||||||  ||||| |||||||||| |||||||    
T  12044840 aaaagggactatgatcttaaaatattctttattctaaaaggacataaataattgaagggactatgctcttatgaccattcttgattccga 12044751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 144 - 268
Target Start/End: Original strand, 12103492 - 12103614
Alignment:
Q  144 tatcgaagggactatattcttaagaccattcttaattccgagaggacattataccaaaaagaaaccaagatcttaagaacactcttaattctgaagggac 243  Q
    ||||||||||||||  || |||||| ||||| |||||| ||  ||| |||| ||| ||||| ||| | | ||||||| ||||||||||||| ||||||||    
T  12103492 tatcgaagggactaggtt-ttaagatcattcgtaattctgaagggatattaaaccgaaaaggaactatggtcttaagtacactcttaattccgaagggac 12103590  T
Q  244 agaaaaaaggagatgaagagaagaa 268  Q
    || |||| |||||||||||||||||    
T  12103591 ag-aaaatggagatgaagagaagaa 12103614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 146 - 268
Target Start/End: Complemental strand, 35679520 - 35679396
Alignment:
Q  146 tcgaagggactatattcttaagaccattcttaatt---ccgagaggacattataccaaaaagaaaccaagatcttaagaacactcttaattctgaaggga 242  Q
    ||||||||||||| || ||||||||||||||||||   | ||  |||||||| ||| |||||  || | | |||| |||||||||||||||| |||||||    
T  35679520 tcgaagggactatgtttttaagaccattcttaattattctgaagggacattaaaccgaaaagggactatggtctttagaacactcttaattccgaaggga 35679421  T
Q  243 cagaaaaaaggagatgaagagaagaa 268  Q
     || |||||||||||||||| |||||    
T  35679420 tag-aaaaaggagatgaagaaaagaa 35679396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 86 - 189
Target Start/End: Complemental strand, 21323689 - 21323585
Alignment:
Q  86 attataccaaaaaagggactatgatcttaaactattatttattctgaagggacaaaaat-atcgaagggactatattcttaagaccattcttaattccga 184  Q
    |||||||| |||||| ||| ||||||||||| ||| ||||||||| ||| |||| |||| || ||| |||||||  ||| ||||||||||||| ||||||    
T  21323689 attataccgaaaaagagaccatgatcttaaaatatgatttattctaaagagacataaataattgaacggactatgctctaaagaccattcttatttccga 21323590  T
Q  185 gagga 189  Q
     ||||    
T  21323589 aagga 21323585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 107 - 181
Target Start/End: Complemental strand, 1429799 - 1429724
Alignment:
Q  107 tgatcttaaactattatttattctgaagggacaaaaat-atcgaagggactatattcttaagaccattcttaattc 181  Q
    |||||||||  ||||||||||||||||| |||| |||| || |||||||||||  ||||||||||||| |||||||    
T  1429799 tgatcttaatatattatttattctgaagagacataaataattgaagggactatgctcttaagaccattattaattc 1429724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 214 - 281
Target Start/End: Complemental strand, 16115792 - 16115726
Alignment:
Q  214 tcttaagaacactcttaattctgaagggacagaaaaaaggagatgaagagaagaataacctgttaaca 281  Q
    ||||||||||||||||||||||||| | ||| |||||||||||||| ||||| ||||||  |||||||    
T  16115792 tcttaagaacactcttaattctgaaagaaca-aaaaaaggagatgaggagaaaaataactcgttaaca 16115726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 96 - 173
Target Start/End: Complemental strand, 6155114 - 6155037
Alignment:
Q  96 aaaagggactatgatcttaaactattatttattctgaagggacaaaaatatcgaagggactatattcttaagaccatt 173  Q
    |||||||||||||||||||||  ||||||||||| |||| ||   |  |||||||||||||||  |||||||||||||    
T  6155114 aaaagggactatgatcttaaaacattatttattccgaagagaatgatttatcgaagggactatgctcttaagaccatt 6155037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 32461318 - 32461277
Alignment:
Q  13 attctaacatctaacttattcaagaatggaataagaatatat 54  Q
    ||||||||||||||||||||||||||| ||| ||||||||||    
T  32461318 attctaacatctaacttattcaagaattgaagaagaatatat 32461277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 248
Target Start/End: Original strand, 41997174 - 41997208
Alignment:
Q  214 tcttaagaacactcttaattctgaagggacagaaa 248  Q
    ||||||||||||||||||||| |||||||||||||    
T  41997174 tcttaagaacactcttaattccgaagggacagaaa 41997208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 248
Target Start/End: Original strand, 42001943 - 42001977
Alignment:
Q  214 tcttaagaacactcttaattctgaagggacagaaa 248  Q
    ||||||||||||||||||||| |||||||||||||    
T  42001943 tcttaagaacactcttaattccgaagggacagaaa 42001977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 3666235 - 3666276
Alignment:
Q  13 attctaacatctaacttattcaagaatggaataagaatatat 54  Q
    ||||||||||||||||| | ||||||||||| ||||||||||    
T  3666235 attctaacatctaacttctccaagaatggaagaagaatatat 3666276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 281
Target Start/End: Complemental strand, 32287826 - 32287762
Alignment:
Q  216 ttaagaacactcttaattctgaagggacagaaaaaaggagatgaagagaagaataacctgttaaca 281  Q
    |||||||||||||| ||| |||| ||||| ||||||||||||||| ||||||| |||  |||||||    
T  32287826 ttaagaacactcttgattttgaaaggaca-aaaaaaggagatgaatagaagaacaactcgttaaca 32287762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 184
Target Start/End: Complemental strand, 32461249 - 32461160
Alignment:
Q  96 aaaagggactatgatctt-aaactattatttattctgaagggacaaaaatatcgaagggactatattcttaagaccattcttaattccga 184  Q
    |||||||||||||||||| |||  ||||||| ||| |||| ||   || |||||||||||||||  ||||||||||||| || |||||||    
T  32461249 aaaagggactatgatctttaaaacattatttgttccgaagagaatgaattatcgaagggactatgctcttaagaccattattgattccga 32461160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 103; Significance: 3e-51; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 13 - 268
Target Start/End: Original strand, 30651251 - 30651504
Alignment:
Q  13 attctaacatctaacttattcaagaatggaataagaatatattttaagatctatcataatttttcgaagtgacattataccaaaaaagggactatgatct 112  Q
    |||||||| |||||||| ||||||||| ||| |||||||||||||||||||  |||||  |||| |||| |||||||||||  |||||||||||||||||    
T  30651251 attctaacgtctaacttcttcaagaatcgaagaagaatatattttaagatcattcata--tttttgaagggacattatacc-gaaaagggactatgatct 30651347  T
Q  113 taaactattatttattctgaagg-gacaaaaatatcgaagggactatattcttaagaccattcttaattccgagaggaca-ttataccaaaaagaaacca 210  Q
    |||| |||||||||||| |||||  | ||||||||||||||||||||   |||||||||||||||||||||||  ||||| ||| ||| || ||  || |    
T  30651348 taaattattatttattccgaaggacataaaaatatcgaagggactatgaacttaagaccattcttaattccgaagggacatttaaaccgaatagggacta 30651447  T
Q  211 agatcttaagaacactcttaattctgaagggacagaaaaaaggagatgaagagaagaa 268  Q
     | |||||||||||||||| |||| |||||||||| ||||||||||||||||||||||    
T  30651448 tggtcttaagaacactctttattccgaagggacag-aaaaaggagatgaagagaagaa 30651504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 13 - 268
Target Start/End: Original strand, 29678090 - 29678344
Alignment:
Q  13 attctaacatctaacttattcaagaatggaataagaatatattttaagatctatcataatttttcgaagtgacattataccaaaaaagggactatgatct 112  Q
    ||||||||||||||||| |||||||||  || || |||||||||||| |||  ||||||||||  |||| ||||||||||| ||||||||||||||||||    
T  29678090 attctaacatctaactttttcaagaatccaagaataatatattttaaaatcattcataatttt--gaagggacattataccgaaaaagggactatgatct 29678187  T
Q  113 taaactattatttattctgaagg-gacaaaaatatcgaagggactatattcttaagaccattcttaattccgagaggaca-ttataccaaaaagaaacca 210  Q
    |||| |||||||||||| |||||  | |||||||||||||| |||||   |||||||||||||||||||||||  | ||| ||| ||| || ||  || |    
T  29678188 taaattattatttattccgaaggacataaaaatatcgaaggaactatgaacttaagaccattcttaattccgaaggaacatttaaaccgaatagggacta 29678287  T
Q  211 agatcttaagaacactcttaattctgaagggacagaaaaaaggagatgaagagaagaa 268  Q
     | ||||||||||||||||||||||||||| |||| ||||| ||||||||||||||||    
T  29678288 tggtcttaagaacactcttaattctgaaggaacag-aaaaatgagatgaagagaagaa 29678344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 103 - 268
Target Start/End: Complemental strand, 25496997 - 25496831
Alignment:
Q  103 actatgatcttaaac-tattatttattctgaagggacaaaaat-atcgaagggactatattcttaagaccattcttaattccgagaggacattataccaa 200  Q
    ||||||||||||||  || | ||||||||||||||||| | || |||||||||||||| || ||||||||||||||||||||||  |||||||| ||| |    
T  25496997 actatgatcttaaaagtactctttattctgaagggacatatattatcgaagggactatgtt-ttaagaccattcttaattccgaagggacattaaaccga 25496899  T
Q  201 aaagaaaccaagatcttaagaacactcttaattctgaagggacagaaaaaaggagatgaagagaagaa 268  Q
    ||||  || ||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  25496898 aaagggactaaggtcttaagaacactcttaattccgaagggacagaaaaaaggagatgaagagaagaa 25496831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 78 - 268
Target Start/End: Complemental strand, 42926341 - 42926151
Alignment:
Q  78 gaagtgacattataccaaaaaagggactatgatcttaaactattatttattctgaaggg-acaaaaatatcgaagggactatattcttaagaccattctt 176  Q
    |||| ||||||||||| ||||| |||||||||||||||| ||||||||||||  ||||  | ||||||||||||||||||||   ||||| |||||||||    
T  42926341 gaagggacattataccgaaaaaaggactatgatcttaaattattatttattccaaaggacataaaaatatcgaagggactatgaacttaataccattctt 42926242  T
Q  177 aattccgagaggacattataccaaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaaaaaggagatgaagagaagaa 268  Q
    ||||| ||  |||||||| ||| ||||| ||| | | | ||||||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  42926241 aattctgaagggacattaaaccgaaaaggaactatggtattaagaacactcttaattccgaagggacaga-aaaaggagatgaagagaagaa 42926151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 22 - 268
Target Start/End: Complemental strand, 7737616 - 7737370
Alignment:
Q  22 tctaacttattcaagaatggaataagaatatattttaagatctatcataatttttcgaagtgacattataccaaaaaagg-gactatgatcttaaactat 120  Q
    |||||||| ||||||||| ||| ||||||||| |||||||||  ||| ||||||  |||| ||||||||||| |||| || |||  ||||||||||  ||    
T  7737616 tctaacttcttcaagaattgaagaagaatataatttaagatcattcaaaatttt--gaagggacattataccgaaaagggagaccgtgatcttaaataat 7737519  T
Q  121 tatttattctgaaggg-acaaaaatatcgaagggactatattcttaagaccattcttaattccgagaggacattataccaaaaagaaaccaagatcttaa 219  Q
    ||||||||| |||||  | ||||||||||||| ||||||   ||||||||||||||||||||| |  |||||||| |||  ||||  || | | ||||||    
T  7737518 tatttattccgaaggacataaaaatatcgaagagactatgaacttaagaccattcttaattccaaagggacattaaaccgtaaagggactatggtcttaa 7737419  T
Q  220 gaacactcttaattctgaagggacagaaaaaaggagatgaagagaagaa 268  Q
    |||| ||||||| || |||||||||||||||| || |||||||||||||    
T  7737418 gaacgctcttaactccgaagggacagaaaaaatgatatgaagagaagaa 7737370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 144 - 268
Target Start/End: Complemental strand, 9180359 - 9180235
Alignment:
Q  144 tatcgaagggactatattcttaagaccattcttaattccgagaggacattataccaaaaagaaaccaagatcttaagaacactcttaattctgaagggac 243  Q
    ||||||||||||||| || ||||||||||||||||||||||  |||||||| ||| |||||  || | | ||||||||||||||||||||| |||||| |    
T  9180359 tatcgaagggactatttttttaagaccattcttaattccgaagggacattaaaccgaaaagcgactatggtcttaagaacactcttaattccgaaggggc 9180260  T
Q  244 agaaaaaaggagatgaagagaagaa 268  Q
    |||||||||||||||||||||||||    
T  9180259 agaaaaaaggagatgaagagaagaa 9180235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 99 - 268
Target Start/End: Complemental strand, 1934669 - 1934502
Alignment:
Q  99 agggactatgatcttaaac-tattatttattctgaagggacaaaaatatcgaagggactatattcttaagaccattcttaattccgagaggacattatac 197  Q
    ||||||||||||||||||  |||| |||||||||||||||||    ||||||||||||||| || ||||||||||||||||||||||  |||||| | ||    
T  1934669 agggactatgatcttaaaagtattctttattctgaagggacatt--tatcgaagggactatgtttttaagaccattcttaattccgaagggacatgaaac 1934572  T
Q  198 caaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaaaaaggagatgaagagaagaa 268  Q
    | |||||  || | | |||||||||||||||||| || ||||||||||| |||||||||||||||||||||    
T  1934571 cgaaaagcgactatggtcttaagaacactcttaaatccgaagggacaga-aaaaggagatgaagagaagaa 1934502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 99 - 268
Target Start/End: Complemental strand, 9185094 - 9184926
Alignment:
Q  99 agggactatgatcttaaac-tattatttattctgaagggacaaaaatatcgaagggactatattcttaagaccattcttaattccgagaggacattatac 197  Q
    ||||||||||||||||||  || | ||||| |||||||||||    ||||||||||||||| || ||||||||||||||||||||||  |||||||| ||    
T  9185094 agggactatgatcttaaaagtactctttatcctgaagggacatt--tatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaac 9184997  T
Q  198 caaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaaaaaggagatgaagagaagaa 268  Q
    | |||||  || | | ||||||||||||||||| ||| ||||||||| |||||||||||||||||||||||    
T  9184996 cgaaaagcgactatggtcttaagaacactcttatttccgaagggacaaaaaaaaggagatgaagagaagaa 9184926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 99 - 244
Target Start/End: Original strand, 18344842 - 18344988
Alignment:
Q  99 agggactatgatcttaaac-tattatttattctgaagggacaaaaat-atcgaagggactatattcttaagaccattcttaattccgagaggacattata 196  Q
    ||||||||||||||||||  || ||||||||||||||||||| | || |||||||||||||| || |||||||||||||| ||||||| ||||||||| |    
T  18344842 agggactatgatcttaaaagtactatttattctgaagggacatatattatcgaagggactatgtt-ttaagaccattcttcattccgaaaggacattaaa 18344940  T
Q  197 ccaaaaagaaaccaagatcttaagaacactcttaattctgaagggaca 244  Q
    ||||||||  || | | ||||||||||||||||||||| |||||||||    
T  18344941 ccaaaaagggactatggtcttaagaacactcttaattccgaagggaca 18344988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 103 - 268
Target Start/End: Complemental strand, 25477969 - 25477803
Alignment:
Q  103 actatgatcttaaac-tattatttattctgaagggacaaaaat-atcgaagggactatattcttaagaccattcttaattccgagaggacattataccaa 200  Q
    ||||||||||||||  || | ||||||||||||||||| | || |||||||||||||| || ||||||||||||||||||||||  |||||||| ||| |    
T  25477969 actatgatcttaaaagtactctttattctgaagggacatatattatcgaagggactatgtt-ttaagaccattcttaattccgaagggacattaaaccga 25477871  T
Q  201 aaagaaaccaagatcttaagaacactcttaattctgaagggacagaaaaaaggagatgaagagaagaa 268  Q
    ||||  || | | |||||| |||||| ||||||  |||||||||||||||||||||||||||||||||    
T  25477870 aaagggactatggtcttaaaaacacttttaatttcgaagggacagaaaaaaggagatgaagagaagaa 25477803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 12 - 233
Target Start/End: Complemental strand, 13291298 - 13291075
Alignment:
Q  12 tattctaacatctaacttattcaagaatggaataagaatatatttt-aagatctatcataatttttcgaagtgacattataccaaaaaagggactatgat 110  Q
    ||||||||| |||||||| | ||||||| ||| || |||||||||| ||||||  || ||||||| ||||| |||||||||||  |||| | ||||||||    
T  13291298 tattctaacctctaacttctccaagaatcgaaaaataatatatttttaagatcattcttaatttt-cgaagggacattatacctcaaaaagaactatgat 13291200  T
Q  111 cttaaac-tattatttattctgaagggacaaaaat-atcgaagggactatattcttaagaccattcttaattccgagaggacattataccaaaaagaaac 208  Q
    ||||||  || |||||||||| |||||||| |||| |||||||||| |||| ||||||||||||| | ||||||||  |||||||||| | | |||   |    
T  13291199 cttaaaaatactatttattcttaagggacataaattatcgaagggattatactcttaagaccattgtcaattccgaagggacattatatctagaagggtc 13291100  T
Q  209 caagatcttaagaacactcttaatt 233  Q
     | ||||||||||||||||||||||    
T  13291099 tatgatcttaagaacactcttaatt 13291075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 99 - 268
Target Start/End: Original strand, 12797344 - 12797513
Alignment:
Q  99 agggactatgatcttaaac-tattatttattctgaagggacaaaaat-atcgaagggactatattcttaagaccattcttaattccgagaggacattata 196  Q
    ||||| ||||||||||||  || | ||||||||||||||||| | || |||||||||||||| || |||||| |||||||||||| ||  |||||||| |    
T  12797344 agggattatgatcttaaaagtactctttattctgaagggacatatattatcgaagggactatgtt-ttaagagcattcttaattctgaagggacattaaa 12797442  T
Q  197 ccaaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaaaaaggagatgaagagaagaa 268  Q
    || |||||  || | | | ||||||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  12797443 ccgaaaagggactatggtattaagaacactcttaattccgaagggacag-aaaaaggagatgaagagaagaa 12797513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 86 - 281
Target Start/End: Complemental strand, 17453296 - 17453101
Alignment:
Q  86 attataccaaaaaagggactatgatcttaaactattatttattctgaagggacaaaaat-atcgaagggactatattcttaagaccattcttaattccga 184  Q
    |||||||| |||||||||||||||| ||||| |||||||||||||||||    | |||| || |||||||||||  | ||||||||||||||||||||||    
T  17453296 attataccgaaaaagggactatgatattaaaatattatttattctgaagacttataaataattgaagggactatgctattaagaccattcttaattccga 17453197  T
Q  185 gaggacattataccaaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaaaaaggagatgaagagaagaataacctgttaaca 281  Q
      | ||| |||||  ||||   ||   | |||||||| ||||||||||||  |||||||||||| || |||||||||||||||||| | ||||||||    
T  17453196 aggaacaatatactgaaaaaggactttggtcttaagagcactcttaattccaaagggacagaaagaa-gagatgaagagaagaatagcttgttaaca 17453101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 99 - 248
Target Start/End: Complemental strand, 17968639 - 17968489
Alignment:
Q  99 agggactatgatcttaaac-tattatttattctgaagggacaaaaat-atcgaagggactatattcttaagaccattcttaattccgagaggacattata 196  Q
    ||||||||||||||||||  || | |||||| |||||||||| | || |||||||||||||| || ||||||||||||||||||||||  |||||||| |    
T  17968639 agggactatgatcttaaaagtactctttattttgaagggacatatattatcgaagggactatgtt-ttaagaccattcttaattccgaagggacattaaa 17968541  T
Q  197 ccaaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaa 248  Q
    || |||||  || | | ||||||||||||| ||||||| |||||||||||||    
T  17968540 ccgaaaagggactatggtcttaagaacacttttaattccgaagggacagaaa 17968489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 13 - 184
Target Start/End: Complemental strand, 19094258 - 19094086
Alignment:
Q  13 attctaacatctaacttattcaagaatggaataagaatatattt-taagatctatcataatttttcgaagtgacattataccaaaaaagggactatgatc 111  Q
    ||||||||||||||||| |  |||||| ||| |||||| ||||| |||||||  || ||||||| ||||| | ||||||||| |||| || | |||||||    
T  19094258 attctaacatctaacttctcgaagaatcgaagaagaatttatttgtaagatcattcttaatttt-cgaaggggcattataccgaaaatgg-attatgatc 19094161  T
Q  112 ttaaactattatttattctgaagggac--aaaaatatcgaagggactatattcttaagaccattcttaattccga 184  Q
    ||||| |||||||||||||||| ||||  |||||||| ||| ||| |||  ||||||||||||||||||||||||    
T  19094160 ttaaaatattatttattctgaaaggacataaaaatattgaaaggagtatgctcttaagaccattcttaattccga 19094086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 86 - 244
Target Start/End: Complemental strand, 6297606 - 6297447
Alignment:
Q  86 attataccaaaaaagggactatgatcttaaactattatttattctgaagggacaaaaat-atcgaagggactatattcttaagaccattcttaattccga 184  Q
    |||||||  |||||||||| ||||||||||| ||||||||||||| ||| |||| |||| || |||||||||||  ||||||||||||||||| ||||||    
T  6297606 attatactgaaaaagggaccatgatcttaaaatattatttattctaaagagacataaataattgaagggactatgctcttaagaccattcttatttccga 6297507  T
Q  185 gaggacattataccaaaaagaaaccaagatcttaagaacactcttaattctgaagggaca 244  Q
     |||| | || ||| |  |   || | | ||||||||||||||||||||| |||||||||    
T  6297506 aaggataataaaccgacgatggactatggtcttaagaacactcttaattccgaagggaca 6297447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 99 - 244
Target Start/End: Complemental strand, 19892149 - 19892003
Alignment:
Q  99 agggactatgatcttaaac-tattatttattctgaagggacaaaaat-atcgaagggactatattcttaagaccattcttaattccgagaggacattata 196  Q
    ||||||||||||||||||  || | ||||||||||||||||| | || |||||| ||||||| || ||||||||||||||||||| ||  |||||||| |    
T  19892149 agggactatgatcttaaaagtactctttattctgaagggacatatattatcgaatggactatgtt-ttaagaccattcttaattctgaagggacattaaa 19892051  T
Q  197 ccaaaaagaaaccaagatcttaagaacactcttaattctgaagggaca 244  Q
    || |||||  || | ||||||||||||||||||||||| |||| ||||    
T  19892050 ccgaaaagggactatgatcttaagaacactcttaattccgaagcgaca 19892003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 99 - 268
Target Start/End: Original strand, 31327169 - 31327339
Alignment:
Q  99 agggactatgatcttaaac-tattatttattctgaagggacaaaaat-atcgaagggactatattcttaagaccattcttaattccgagaggacattata 196  Q
    ||||||||||||||||||  || | ||||||  ||||||||| | || |||||||| ||||| || ||||||||||||||||||||||  |||||||  |    
T  31327169 agggactatgatcttaaaagtactttttatttcgaagggacatatattatcgaaggaactatgtt-ttaagaccattcttaattccgaagggacattgaa 31327267  T
Q  197 ccaaaa-agaaaccaagatcttaagaacactcttaattctgaagggacagaaaaaaggagatgaagagaagaa 268  Q
    || ||| ||  || | | ||||||||||||||||||||  ||||||||| |||||||||||||||||||||||    
T  31327268 ccgaaacagggactatggtcttaagaacactcttaatttcgaagggaca-aaaaaaggagatgaagagaagaa 31327339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 96 - 184
Target Start/End: Original strand, 30643513 - 30643602
Alignment:
Q  96 aaaagggactatgatcttaaactattatttattctgaagggacaaaaat-atcgaagggactatattcttaagaccattcttaattccga 184  Q
    ||||||||||||||||||||| |||| |||||||| || ||||| |||| || |||||||||||  |||||||||||||||| |||||||    
T  30643513 aaaagggactatgatcttaaaatattctttattctaaaaggacataaataattgaagggactatgctcttaagaccattcttgattccga 30643602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 163 - 270
Target Start/End: Complemental strand, 40847202 - 40847095
Alignment:
Q  163 ttaagaccattcttaattccgagaggacattataccaaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaaaaaggagatgaaga 262  Q
    |||||||| ||||||||| |||  |||||||||||  || ||  || ||| ||||||||||||||||| ||  ||||||| |||||||||||||||| ||    
T  40847202 ttaagacctttcttaatttcgaatggacattatactgaatagggactaaggtcttaagaacactcttattttcgaagggatagaaaaaaggagatgagga 40847103  T
Q  263 gaagaata 270  Q
    ||||||||    
T  40847102 gaagaata 40847095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 96 - 184
Target Start/End: Complemental strand, 10160426 - 10160337
Alignment:
Q  96 aaaagggactatgatcttaaactattatttattctgaagggacaaaaat-atcgaagggactatattcttaagaccattcttaattccga 184  Q
    |||| |||||||||||||||| |||| |||||||| || ||||| |||| || |||||||||||  |||||||||||||||| |||||||    
T  10160426 aaaatggactatgatcttaaaatattctttattctaaaaggacataaataattgaagggactatgctcttaagaccattcttgattccga 10160337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 96 - 184
Target Start/End: Original strand, 30658568 - 30658656
Alignment:
Q  96 aaaagggactatgatcttaaactattatttattctgaagggacaaaaata-tcgaagggactatattcttaagaccattcttaattccga 184  Q
    ||||||||||||||||||||| ||||||||||||| || ||||| ||||| | ||| | |||||  |||||||||||||||| |||||||    
T  30658568 aaaagggactatgatcttaaaatattatttattctaaaaggacataaataattgaatg-actatgctcttaagaccattcttgattccga 30658656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 96 - 184
Target Start/End: Original strand, 35602316 - 35602405
Alignment:
Q  96 aaaagggactatgatcttaaactattatttattctgaagggacaaaaat-atcgaagggactatattcttaagaccattcttaattccga 184  Q
    ||||||||||||||||||||| |||| |||||||| ||  |||| |||| || ||||||||| |  |||||||||||||||| |||||||    
T  35602316 aaaagggactatgatcttaaaatattctttattctaaaaagacataaataattgaagggactgtgctcttaagaccattcttgattccga 35602405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 188 - 283
Target Start/End: Complemental strand, 19578166 - 19578071
Alignment:
Q  188 gacattataccaaaaagaaaccaagatcttaagaacactcttaatt-ctgaagggacagaaaaaaggagatgaagagaagaataacctgttaacaaa 283  Q
    ||||||||||| || ||| || ||| |||||||||||||||||||| |  ||||||||| ||||||||||||| ||||| ||||||  |||||||||    
T  19578166 gacattataccgaatagagactaagttcttaagaacactcttaattccaaaagggacag-aaaaaggagatgaggagaaaaataactcgttaacaaa 19578071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 98 - 182
Target Start/End: Original strand, 14104951 - 14105037
Alignment:
Q  98 aagggactatgatcttaa-actattatttattctgaagggacaaaaat-atcgaagggactatattcttaagaccattcttaattcc 182  Q
    |||||||||||||||||| | || | ||  |||||||||||| ||| | | |||||||||||| |||||||||||||||||||||||    
T  14104951 aagggactatgatcttaagaatactcttatttctgaagggacgaaatttaccgaagggactatgttcttaagaccattcttaattcc 14105037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 268
Target Start/End: Original strand, 30619403 - 30619456
Alignment:
Q  214 tcttaagaacactcttaattctgaagggacagaaaaaaggagatgaagagaagaa 268  Q
    |||||||||| || |||||||||||||||||  ||||||||||||||||||||||    
T  30619403 tcttaagaactcttttaattctgaagggaca-taaaaaggagatgaagagaagaa 30619456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 150 - 196
Target Start/End: Complemental strand, 17255057 - 17255011
Alignment:
Q  150 agggactatattcttaagaccattcttaattccgagaggacattata 196  Q
    ||||||||| ||||||||||||||||||||| |||  ||||||||||    
T  17255057 agggactatgttcttaagaccattcttaatttcgaagggacattata 17255011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 251
Target Start/End: Original strand, 7735124 - 7735161
Alignment:
Q  214 tcttaagaacactcttaattctgaagggacagaaaaaa 251  Q
    |||||||||||||||||| |||||||||||| ||||||    
T  7735124 tcttaagaacactcttaaatctgaagggacaaaaaaaa 7735161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 247
Target Start/End: Complemental strand, 23068337 - 23068304
Alignment:
Q  214 tcttaagaacactcttaattctgaagggacagaa 247  Q
    ||||||||||||||||||||| ||||||||||||    
T  23068337 tcttaagaacactcttaattccgaagggacagaa 23068304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 95; Significance: 2e-46; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 13 - 268
Target Start/End: Complemental strand, 40125658 - 40125404
Alignment:
Q  13 attctaacatctaacttattcaagaatggaataagaatatattttaagatctatcataatttttcgaagtgacattataccaaaaaagggactatgatct 112  Q
    |||||||| |||||||| ||||||||| ||| |||||||||||||||||||  ||||| ||||  |||| | |||| |||| ||||||||||||||||||    
T  40125658 attctaacgtctaacttcttcaagaatcgaagaagaatatattttaagatcattcatattttt--gaaggggcattgtaccgaaaaagggactatgatct 40125561  T
Q  113 taaactattatttattctgaaggg-acaaaaatatcgaagggactatattcttaagaccattcttaattccgagaggaca-ttataccaaaaagaaacca 210  Q
    |||| |||||||||||  |||||  | ||||||||||||||||||||   |||||||||||||||||||||||  ||||| ||| | | || ||  || |    
T  40125560 taaattattatttatttcgaaggacataaaaatatcgaagggactatgaacttaagaccattcttaattccgaagggacatttaaaacgaatagggacta 40125461  T
Q  211 agatcttaagaacactcttaattctgaagggacagaaaaaaggagatgaagagaagaa 268  Q
     | ||||||||||||||||||||| ||| |||||| ||||||||||||||||||||||    
T  40125460 tggtcttaagaacactcttaattccgaacggacag-aaaaaggagatgaagagaagaa 40125404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 25 - 268
Target Start/End: Original strand, 17026270 - 17026514
Alignment:
Q  25 aacttattcaagaatggaataagaatatattttaagatctatcataatttttcgaagtgacattataccaaaaaaggg--actatgatcttaaactatta 122  Q
    ||||| ||||||||| ||| |||||||||||||||||||  ||||||||||  |||| ||||||||||| |||| |||  |||||||||||||| |||||    
T  17026270 aacttcttcaagaattgaagaagaatatattttaagatcattcataatttt--gaagggacattataccgaaaacgggccactatgatcttaaattatta 17026367  T
Q  123 tttattctgaagg-gacaaaaatatcgaagggactatattcttaagaccattcttaattccgagaggaca-ttataccaaaaagaaaccaagatcttaag 220  Q
    ||||||| |||||  | ||| ||||||||||||||||   |||||||||||||||||||||||  ||||| ||| ||| || ||  || | | |||||||    
T  17026368 tttattccgaaggacataaacatatcgaagggactatgaacttaagaccattcttaattccgaagggacatttaaaccgaatagggactatggtcttaag 17026467  T
Q  221 aacactcttaattctgaagggacagaaaaaaggagatgaagagaagaa 268  Q
    |||||||||||||| |||||||||| ||||||||||||||||||||||    
T  17026468 aacactcttaattccgaagggacag-aaaaaggagatgaagagaagaa 17026514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 25 - 268
Target Start/End: Original strand, 17556762 - 17557006
Alignment:
Q  25 aacttattcaagaatggaataagaatatattttaagatctatcataatttttcgaagtgacattataccaaaaaaggg--actatgatcttaaactatta 122  Q
    ||||| ||||||||| ||| |||||||||||||||||||  ||||||||||  |||| ||||||||||| |||| |||  |||||||||||||| |||||    
T  17556762 aacttcttcaagaattgaagaagaatatattttaagatcattcataatttt--gaagggacattataccgaaaacgggccactatgatcttaaattatta 17556859  T
Q  123 tttattctgaagg-gacaaaaatatcgaagggactatattcttaagaccattcttaattccgagaggaca-ttataccaaaaagaaaccaagatcttaag 220  Q
    ||||||| |||||  | ||| ||||||||||||||||   |||||||||||||||||||||||  ||||| ||| ||| || ||  || | | |||||||    
T  17556860 tttattccgaaggacataaacatatcgaagggactatgaacttaagaccattcttaattccgaagggacatttaaaccgaatagggactatggtcttaag 17556959  T
Q  221 aacactcttaattctgaagggacagaaaaaaggagatgaagagaagaa 268  Q
    |||||||||||||| |||||||||| ||||||||||||||||||||||    
T  17556960 aacactcttaattccgaagggacag-aaaaaggagatgaagagaagaa 17557006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 13 - 265
Target Start/End: Complemental strand, 17953739 - 17953485
Alignment:
Q  13 attctaacatctaacttattcaagaatggaataagaatata-ttttaagatctatcataatttttcgaagtgacattataccaaaaaagggactatgatc 111  Q
    ||||||||||||||||| |  |||||| ||| || ||| || ||||||| ||  || ||| ||||||||| |||||| ||||  |||||| ||||||||     
T  17953739 attctaacatctaacttctcgaagaatcgaagaaaaatttatttttaaggtcattcttaa-ttttcgaagggacattgtacc-gaaaaggaactatgatg 17953642  T
Q  112 ttaaactattatttattctgaagggac--aaaaatatcgaagggactatattcttaagaccattcttaattccgagaggacattatacc-aaaaagaaac 208  Q
    ||||| ||||||||||||| |||||||  ||||||||||||||||||||  ||||||||||||||||||||  ||  |||||||||||| ||||||  ||    
T  17953641 ttaaaatattatttattcttaagggacataaaaatatcgaagggactatgctcttaagaccattcttaatttggaagggacattataccgaaaaagggac 17953542  T
Q  209 caagatcttaagaacactcttaattctgaagggacagaaaaaaggagatgaagagaa 265  Q
    || | | |||||||||| ||||||| |||||||||| ||||||||||||||||||||    
T  17953541 catggttttaagaacacacttaattatgaagggacataaaaaaggagatgaagagaa 17953485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 73 - 268
Target Start/End: Complemental strand, 15875400 - 15875201
Alignment:
Q  73 ttttcgaagtgacattataccaaaaaagggactatgatcttaaactattatttattctgaagggac--aaaaatatcgaagggactatattcttaagacc 170  Q
    ||||||||| |||||| |||| |||| ||||||||||||||||| |||||||||||||||||||||  ||||||||| ||||||||||| |||||| |||    
T  15875400 ttttcgaagggacattttaccgaaaa-gggactatgatcttaaaatattatttattctgaagggacataaaaatatcaaagggactatactcttaatacc 15875302  T
Q  171 attcttaattccgagaggacattatacc-aaaaagaaaccaagatctta---agaacactcttaattctgaagggacagaaaaaaggagatgaagagaag 266  Q
    ||| ||||||||||  ||| |||||||| |||||   || |   |||||   |||||||||||||||| |||||||||| |||||| |||||||||||||    
T  15875301 atttttaattccgaagggagattataccgaaaaaaggactactgtcttaattagaacactcttaattccgaagggacag-aaaaagaagatgaagagaag 15875203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 144 - 268
Target Start/End: Complemental strand, 38181875 - 38181751
Alignment:
Q  144 tatcgaagggactatattcttaagaccattcttaattccgagaggacattataccaaaaagaaaccaagatcttaagaacactcttaattctgaagggac 243  Q
    |||||||| |||||| || ||||||||||| ||||||||||  |||||||| ||| |||||  || | | ||||||||||||||||||||| ||||||||    
T  38181875 tatcgaagagactatgtttttaagaccatttttaattccgaagggacattaaaccgaaaagggactatggtcttaagaacactcttaattccgaagggac 38181776  T
Q  244 agaaaaaaggagatgaagagaagaa 268  Q
    |||||||||||||||||||||||||    
T  38181775 agaaaaaaggagatgaagagaagaa 38181751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 95 - 268
Target Start/End: Original strand, 19167059 - 19167234
Alignment:
Q  95 aaaaagggactatgatcttaa-actattatttattctgaagggacaaaaat-atcgaagggactatattcttaagaccattcttaattccgagaggacat 192  Q
    ||||||||||||||||||||| | || | ||||||| ||||||||  | || |||||| | ||||| || | ||||||||||||||||||||  || |||    
T  19167059 aaaaagggactatgatcttaatagtactctttattccgaagggacttatattatcgaatgaactatgttttaaagaccattcttaattccgaagggtcat 19167158  T
Q  193 tataccaaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaaaaaggagatgaagagaagaa 268  Q
    || ||| |||||  || | | ||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  19167159 taaaccgaaaagggactatggtcttaagaacactcttaattccgaagggacagaaaaaaggagatgaagagaagaa 19167234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 93 - 268
Target Start/End: Complemental strand, 1910640 - 1910463
Alignment:
Q  93 caaaaaagggactatgatcttaa-actattatttattctgaagggacaaaaat-atcgaagggactatattcttaagaccattcttaattccgagaggac 190  Q
    ||||||||||||||||||||||| | || | ||||||  ||||||||  | || |||||| ||||||| || ||||||||||||||||||  ||  ||||    
T  1910640 caaaaaagggactatgatcttaatagtactctttatttcgaagggacttatattatcgaatggactatgtttttaagaccattcttaattatgaagggac 1910541  T
Q  191 attataccaaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaaaaaggagatgaagagaagaa 268  Q
    |||| ||| |||||  || | | |||||||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  1910540 attaaaccgaaaagggactatggtcttaagaacactcttaattccaaagggacagaaaaaaggagatgaagagaagaa 1910463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 144 - 268
Target Start/End: Original strand, 17020814 - 17020938
Alignment:
Q  144 tatcgaagggactatattcttaagaccattcttaattccgagaggacattataccaaaaagaaaccaagatcttaagaacactcttaattctgaagggac 243  Q
    ||||||||||||||| || |||||||||||||||||||| |  |||||||| ||| | ||   || | | ||||||||||||||||||||| ||||||||    
T  17020814 tatcgaagggactatgtttttaagaccattcttaattccaaagggacattaaaccgagaaaggactatggtcttaagaacactcttaattccgaagggac 17020913  T
Q  244 agaaaaaaggagatgaagagaagaa 268  Q
    |||||||||||||||||||||||||    
T  17020914 agaaaaaaggagatgaagagaagaa 17020938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 144 - 268
Target Start/End: Original strand, 17551251 - 17551375
Alignment:
Q  144 tatcgaagggactatattcttaagaccattcttaattccgagaggacattataccaaaaagaaaccaagatcttaagaacactcttaattctgaagggac 243  Q
    ||||||||||||||| || |||||||||||||||||||| |  |||||||| ||| | ||   || | | ||||||||||||||||||||| ||||||||    
T  17551251 tatcgaagggactatgtttttaagaccattcttaattccaaagggacattaaaccgagaaaggactatggtcttaagaacactcttaattccgaagggac 17551350  T
Q  244 agaaaaaaggagatgaagagaagaa 268  Q
    |||||||||||||||||||||||||    
T  17551351 agaaaaaaggagatgaagagaagaa 17551375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 96 - 248
Target Start/End: Complemental strand, 31449567 - 31449415
Alignment:
Q  96 aaaagggactatgatcttaaactattatttattctgaagggacaaaaatatcgaagggactatattcttaagaccattcttaattccgagaggacattat 195  Q
    |||||||||||||||||||||  ||||||||||| ||||  |   || |||||||||||||||  ||||||||||||||||||||||||  ||||||||     
T  31449567 aaaagggactatgatcttaaaacattatttattccgaagataatgaattatcgaagggactatgctcttaagaccattcttaattccgaagggacattaa 31449468  T
Q  196 accaaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaa 248  Q
    ||| ||||   || | | ||||||||||||||||||||| |||||||||||||    
T  31449467 accgaaaatggactatggtcttaagaacactcttaattccgaagggacagaaa 31449415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 99 - 265
Target Start/End: Complemental strand, 44925599 - 44925433
Alignment:
Q  99 agggactatgatcttaaac-tattatttattctgaagggacaaaaat-atcgaagggactatattcttaagaccattcttaattccgagaggacattata 196  Q
    ||||||||||||||||||  || ||||||||||||||||||| | || ||||||||| |||| || ||||||||||||||||||||||  |||||||  |    
T  44925599 agggactatgatcttaaaagtactatttattctgaagggacatatattatcgaaggggctatgtt-ttaagaccattcttaattccgaagggacattgaa 44925501  T
Q  197 ccaaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaaaaaggagatgaagagaa 265  Q
    || ||||   || | | ||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  44925500 ccgaaaatggactatggtcttaagaacactcttaattccgaagggacag-aaaaaggagatgaagagaa 44925433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 99 - 268
Target Start/End: Original strand, 1807866 - 1808033
Alignment:
Q  99 agggactatgatcttaaac-tattatttattctgaagggacaaaaatatcgaagggactatattcttaagaccattcttaattccgagaggacattatac 197  Q
    ||||||||||||||||||  || | |||||||||||||||||    |||||||||||| || || ||||||||||||||||||||||  |||||||| ||    
T  1807866 agggactatgatcttaaaagtaatctttattctgaagggacatt--tatcgaagggacaatgtttttaagaccattcttaattccgaatggacattaaac 1807963  T
Q  198 caaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaaaaaggagatgaagagaagaa 268  Q
    | |||||  || | | ||||||||||||||||||||| ||||| |||| |||||||||||||| |||||||    
T  1807964 cgaaaagtgactatggtcttaagaacactcttaattccgaaggaacag-aaaaaggagatgaatagaagaa 1808033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 96 - 248
Target Start/End: Complemental strand, 4238043 - 4237891
Alignment:
Q  96 aaaagggactatgatcttaaactattatttattctgaagggacaaaaatatcgaagggactatattcttaagaccattcttaattccgagaggacattat 195  Q
    |||||||||||||||||||||  ||||||||||| |||| ||   || |||||||||||||||  | |||||| |||||||||||||||  ||||||||     
T  4238043 aaaagggactatgatcttaaaacattatttattccgaagagaatgaactatcgaagggactatgctgttaagatcattcttaattccgaagggacattaa 4237944  T
Q  196 accaaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaa 248  Q
    ||| |||||  || | | ||||||||||||||||||||| ||| |||||||||    
T  4237943 accgaaaagggactatggtcttaagaacactcttaattccgaatggacagaaa 4237891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 96 - 248
Target Start/End: Complemental strand, 4242782 - 4242630
Alignment:
Q  96 aaaagggactatgatcttaaactattatttattctgaagggacaaaaatatcgaagggactatattcttaagaccattcttaattccgagaggacattat 195  Q
    |||||||||||||||||||||  ||||||||||| |||| ||   || |||||||||||||||  | |||||| |||||||||||||||  ||||||||     
T  4242782 aaaagggactatgatcttaaaacattatttattccgaagagaatgaactatcgaagggactatgctgttaagatcattcttaattccgaagggacattaa 4242683  T
Q  196 accaaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaa 248  Q
    ||| |||||  || | | ||||||||||||||||||||| ||| |||||||||    
T  4242682 accgaaaagggactatggtcttaagaacactcttaattccgaatggacagaaa 4242630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 99 - 249
Target Start/End: Complemental strand, 15951230 - 15951078
Alignment:
Q  99 agggactatgatcttaaac-tattatttattctgaagggacaaaaat-atcgaagggactatattcttaagaccattcttaattccgagaggacattata 196  Q
    ||||||||||||||||||  || | ||||||||||||||||| | || ||| |||||||||| || | ||||||||||||||||||||  |||||||| |    
T  15951230 agggactatgatcttaaaagtactctttattctgaagggacatatattatcaaagggactatgttttaaagaccattcttaattccgaagggacattaaa 15951131  T
Q  197 ccaaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaaa 249  Q
    || |||||  || | | ||||||||||||||||||||| ||||||||||||||    
T  15951130 ccgaaaagggactatggtcttaagaacactcttaattccgaagggacagaaaa 15951078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 96 - 268
Target Start/End: Complemental strand, 18876070 - 18875897
Alignment:
Q  96 aaaagggactatgatcttaa-actattatttattctgaagggacaaaaat-atcgaagggactatattcttaagaccattcttaattccgagaggacatt 193  Q
    |||||||||||||||||||| | || | ||||||| ||||||||  | || |||| || |||||| || |||||||||||||||||| |||  |||||||    
T  18876070 aaaagggactatgatcttaatattactctttattccgaagggacttatattatcggagtgactatgtttttaagaccattcttaatttcgaagggacatt 18875971  T
Q  194 ataccaaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaaaaaggagatgaagagaagaa 268  Q
    | ||| |||||  || | | ||||||||||||||||||||  ||||||||||| |||||||||||||||||||||    
T  18875970 aaaccgaaaagggacaatggtcttaagaacactcttaatttcgaagggacaga-aaaaggagatgaagagaagaa 18875897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 99 - 265
Target Start/End: Original strand, 36683999 - 36684168
Alignment:
Q  99 agggactatgatcttaaac-tattatttattctgaagggacaaa-aatatcgaagggactatattcttaagaccattcttaattccgagaggacattata 196  Q
    ||||||||||||||||||  || | ||||||||||||||||| | ||||||||| ||||||| || ||||||||| ||||||||||||  |||||||| |    
T  36683999 agggactatgatcttaaaagtactctttattctgaagggacatataatatcgaatggactatgtt-ttaagaccactcttaattccgaagggacattaaa 36684097  T
Q  197 ccaaaaagaaaccaagat---cttaagaacactcttaattctgaagggacagaaaaaaggagatgaagagaa 265  Q
    || |||||| ||||  ||   |||||||||| ||||||||| |||||||||| |||||| ||||||||||||    
T  36684098 ccgaaaagagaccaccatggtcttaagaacattcttaattccgaagggacag-aaaaagaagatgaagagaa 36684168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 86 - 189
Target Start/End: Original strand, 37772086 - 37772190
Alignment:
Q  86 attataccaaaaaagggactatgatcttaaactattatttattctgaagggacaaaaat-atcgaagggactatattcttaagaccattcttaattccga 184  Q
    |||||||| |||||||||| ||||||||||| ||||||||||||| ||| |||| |||| || |||||||||||  ||||||||||||||||| ||||||    
T  37772086 attataccgaaaaagggaccatgatcttaaaatattatttattctaaagagacataaataattgaagggactatgctcttaagaccattcttatttccga 37772185  T
Q  185 gagga 189  Q
     ||||    
T  37772186 aagga 37772190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 86 - 182
Target Start/End: Complemental strand, 25367700 - 25367603
Alignment:
Q  86 attataccaaaaaagggactatgatcttaaactattatttattctgaagggacaaaaat-atcgaagggactatattcttaagaccattcttaattcc 182  Q
    |||||||| |||||||||| ||||||||||| ||||||||||||| ||| |||| |||| |  |||||||||||  ||||||||||||||||| ||||    
T  25367700 attataccgaaaaagggaccatgatcttaaaatattatttattctaaagagacataaataaatgaagggactatgctcttaagaccattcttatttcc 25367603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 86 - 248
Target Start/End: Complemental strand, 8331077 - 8330914
Alignment:
Q  86 attataccaaaaaagggactatgatcttaaactattatttattctgaagggacaaaaat-atcgaagggactatattcttaagaccattcttaattccga 184  Q
    |||||||| |||||||||  ||||||||||| ||||||||||||| ||| || | |||| || |||||||||||  ||||||||||||||||| || |||    
T  8331077 attataccgaaaaagggatcatgatcttaaaatattatttattctaaagagaaataaataattgaagggactatgctcttaagaccattcttattttcga 8330978  T
Q  185 gaggacattataccaaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaa 248  Q
     |||| | || |||||  |   || | | ||||||||| ||||||||||| ||| |||||||||    
T  8330977 aaggataataaaccaacgatggactatggtcttaagaatactcttaattccgaatggacagaaa 8330914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 214 - 268
Target Start/End: Original strand, 33417063 - 33417117
Alignment:
Q  214 tcttaagaacactcttaattctgaagggacagaaaaaaggagatgaagagaagaa 268  Q
    |||||||||||||||||||||  ||||||||||||||| ||||||||||||||||    
T  33417063 tcttaagaacactcttaattccaaagggacagaaaaaatgagatgaagagaagaa 33417117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 96 - 184
Target Start/End: Complemental strand, 43302389 - 43302300
Alignment:
Q  96 aaaagggactatgatcttaaactattatttattctgaagggacaaaaat-atcgaagggactatattcttaagaccattcttaattccga 184  Q
    ||||||||||||||||||||| |||| |||||||| || ||||| |||| || |||||||||||  ||||||||||||| || |||||||    
T  43302389 aaaagggactatgatcttaaaatattctttattctaaaaggacataaataattgaagggactatgctcttaagaccattattgattccga 43302300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 148 - 272
Target Start/End: Original strand, 2966099 - 2966222
Alignment:
Q  148 gaagggactatattcttaagaccattcttaattccgagaggacattataccaaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaa 247  Q
    ||||||||||| || |||||||| |||||||||| ||   ||| ||||||| || ||  || ||| ||||||||||||||||| |||  | |||||| ||    
T  2966099 gaagggactatgtttttaagaccgttcttaattctgaagagacgttataccgaacagggactaaggtcttaagaacactcttatttcctatgggaca-aa 2966197  T
Q  248 aaaaggagatgaagagaagaataac 272  Q
    ||||| |||||||||||||||||||    
T  2966198 aaaagaagatgaagagaagaataac 2966222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 214 - 270
Target Start/End: Complemental strand, 23548177 - 23548121
Alignment:
Q  214 tcttaagaacactcttaattctgaagggacagaaaaaaggagatgaagagaagaata 270  Q
    ||||||||||||||||| ||  ||||||| |||||||||||||||||||||||||||    
T  23548177 tcttaagaacactcttattttcgaagggatagaaaaaaggagatgaagagaagaata 23548121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 94 - 281
Target Start/End: Original strand, 7002063 - 7002252
Alignment:
Q  94 aaaaaagggactatgatctt-aaactattatttattctgaagggaca-aaaatatcgaagggactatattcttaagaccattcttaattccgagaggaca 191  Q
    |||||| ||||||||||||| ||| |||| |||||||  |||||||| ||| |||| ||||||||||   ||||||| ||||||| |||||||  | ||     
T  7002063 aaaaaaaggactatgatcttaaaaatattttttattccaaagggacataaattatcaaagggactatgcccttaagatcattcttgattccgaaggaacg 7002162  T
Q  192 ttata-ccaaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaaaaaggagatgaagagaagaataacctgttaaca 281  Q
    ||||| | |||||  ||| | | |||| |||||||| | ||||||||||| |||| ||||||||||||| ||| ||||||||  |||||||    
T  7002163 ttatatcgaaaaaagaactatggtctttagaacactatcaattctgaaggtacag-aaaaaggagatgaggagtagaataacacgttaaca 7002252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 123 - 272
Target Start/End: Complemental strand, 24672977 - 24672828
Alignment:
Q  123 tttattctgaagggacaaaaat-atcgaagggactatattcttaagaccattcttaattccgagaggacattataccaaaaagaaaccaagatcttaaga 221  Q
    ||||||||||||||||| | || |||||| | ||||| ||||| ||||| |||||||||| ||  |||||||||||| || ||| |  |||  |||||||    
T  24672977 tttattctgaagggacatatattatcgaatgaactatgttctttagacctttcttaattctgaagggacattataccgaatagagagtaaggccttaaga 24672878  T
Q  222 acactcttaattctgaagggacagaaaaaaggagatgaagagaagaataac 272  Q
    ||||| ||||||| ||||||||  |||||  |||| || ||||||||||||    
T  24672877 acacttttaattccgaagggac-taaaaatagagacgaggagaagaataac 24672828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 96 - 272
Target Start/End: Original strand, 26779531 - 26779708
Alignment:
Q  96 aaaagggactatgatcttaaac-tattatttattctgaagggacaaaaata-tcgaagggactatattcttaagaccattcttaattccgagaggacatt 193  Q
    |||||||||||||||||||||  || | ||||||  ||||||||| | ||  |||||| |||||| || |||| ||  |||||||||||||  |||||||    
T  26779531 aaaagggactatgatcttaaaagtactttttatttcgaagggacatacattgtcgaagagactatgtttttaaaacatttcttaattccgaagggacatt 26779630  T
Q  194 ataccaaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaaaaaggagatgaagagaagaataac 272  Q
    |||   || ||  || ||| ||||||||||||||||| |||| ||||| ||| ||||| ||||||| ||||||||||||    
T  26779631 atagtgaatagggactaaggtcttaagaacactcttatttctaaaggggcag-aaaaatgagatgaggagaagaataac 26779708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 86 - 248
Target Start/End: Complemental strand, 34818419 - 34818257
Alignment:
Q  86 attataccaaaaaagggactatgatcttaaactattatttattctgaagggacaaaaat-atcgaagggactatattcttaagaccattcttaattccga 184  Q
    |||||||| ||||||| || ||||||||||| ||||||||||||| |||  ||| |||| || ||| |||||||  ||||||||||||||||| || |||    
T  34818419 attataccgaaaaagg-accatgatcttaaaatattatttattctaaagaaacataaataattgaatggactatgctcttaagaccattcttattttcga 34818321  T
Q  185 gaggacattataccaaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaa 248  Q
     |||| | || ||  |  |  ||| | | ||||||||||||||||||||  |||||||||||||    
T  34818320 aaggataataaactgaggatgaactatggtcttaagaacactcttaatttcgaagggacagaaa 34818257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 127 - 193
Target Start/End: Original strand, 19954663 - 19954730
Alignment:
Q  127 ttctgaagggacaaaaat-atcgaagggactatattcttaagaccattcttaattccgagaggacatt 193  Q
    |||||||||||||||  | | |||||||||||| ||||||||||||||||| |||||||  |||||||    
T  19954663 ttctgaagggacaaattttaccgaagggactatgttcttaagaccattctttattccgaagggacatt 19954730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 147 - 193
Target Start/End: Original strand, 19950230 - 19950276
Alignment:
Q  147 cgaagggactatattcttaagaccattcttaattccgagaggacatt 193  Q
    |||||||||||| ||||||||||||||||| |||||||  |||||||    
T  19950230 cgaagggactatgttcttaagaccattctttattccgaatggacatt 19950276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 144 - 180
Target Start/End: Original strand, 33417011 - 33417047
Alignment:
Q  144 tatcgaagggactatattcttaagaccattcttaatt 180  Q
    ||||||||||||||| || ||||||||||||||||||    
T  33417011 tatcgaagggactatgtttttaagaccattcttaatt 33417047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 91; Significance: 4e-44; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 16 - 268
Target Start/End: Original strand, 14509310 - 14509559
Alignment:
Q  16 ctaacatctaacttattcaagaatggaataagaatatattttaagatctatcataatttttcgaagtgacattataccaaaaaagggactatgatcttaa 115  Q
    ||||| |||||||| ||||||||| ||| ||||||||||||||| |||  ||||||||||  |||| |||||||||||  ||||| ||||||||||||||    
T  14509310 ctaacgtctaactttttcaagaatcgaagaagaatatattttaatatcattcataatttt--gaagggacattatacc-gaaaagagactatgatcttaa 14509406  T
Q  116 actattatttattctgaagg-gacaaaaatatcgaagggactatattcttaagaccattcttaattccgagaggacattataccaaaaagaaaccaagat 214  Q
    | |||||||||| | |||||  | ||||||||||||||||||||   |||||||| ||||||||||| ||  | |||||| ||  |||||  || | | |    
T  14509407 attattatttatac-gaaggacataaaaatatcgaagggactatgaacttaagactattcttaattctgaaggtacattaaactgaaaagggactatggt 14509505  T
Q  215 cttaagaacactcttaattctgaagggacagaaaaaaggagatgaagagaagaa 268  Q
    |||||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  14509506 cttaagaacactcttaattccgaagggacggaaaaaaggagatgaagagaagaa 14509559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 13 - 270
Target Start/End: Original strand, 17913919 - 17914176
Alignment:
Q  13 attctaacatctaacttattcaagaatggaataagaatatattttaagatctatcataatttttcgaagtgacattataccaaaaaagggactatgatct 112  Q
    |||||||| |||||||| |||||||||  || || |||||||||||||| |  |||||||||||||||| |||  |||||| |||||| |||||||||||    
T  17913919 attctaacgtctaacttcttcaagaatcaaagaaaaatatattttaagaacattcataatttttcgaagcgactctataccgaaaaagagactatgatct 17914018  T
Q  113 taaactattatttattctgaag-ggacaaaaatatcgaagggactatattcttaagaccattcttaattccgagaggacattataccaaaaagaaaccaa 211  Q
    |||| |||||||||||  ||||   | || |||||| ||||||||||   |||||||||||||||||||||||  |||||||||| | ||||   || |     
T  17914019 taaaatattatttattgcgaagaacataataatatcaaagggactatgcacttaagaccattcttaattccgaagggacattatatcgaaaatggactat 17914118  T
Q  212 gatcttaagaacactcttaattctgaagggacagaaaaaaggagatgaagagaagaata 270  Q
    | |||||||||||||||||| || ||| |||||| ||||||||||||| ||||||||||    
T  17914119 ggtcttaagaacactcttaaatccgaaaggacag-aaaaaggagatgaggagaagaata 17914176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 96 - 268
Target Start/End: Complemental strand, 2699776 - 2699602
Alignment:
Q  96 aaaagggactatgatcttaa-actattatttattctgaagggacaaaaat-atcgaagggactatattcttaagaccattcttaattccgagaggacatt 193  Q
    |||||||||||||||||||| | || | ||||||| ||||| ||  | || |||||||||||||| || ||||||  ||||||||||| ||  |||||||    
T  2699776 aaaagggactatgatcttaatagtactctttattccgaaggaacttatattatcgaagggactatgtttttaagattattcttaattctgaagggacatt 2699677  T
Q  194 ataccaaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaaaaaggagatgaagagaagaa 268  Q
    | ||| |||||  || | | | ||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  2699676 aaaccgaaaagggactatggttttaagaacactcttaattccgaagggacagaaaaaaggagatgaagagaagaa 2699602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 123 - 268
Target Start/End: Complemental strand, 16835809 - 16835667
Alignment:
Q  123 tttattctgaagggacaaaaatatcgaagggactatattcttaagaccattcttaattccgagaggacattataccaaaaagaaaccaagatcttaagaa 222  Q
    |||||||||||||||||    ||||||||||||||| || ||||||||||||||||||||||  |||||||| ||| |||||  || | | |||||||||    
T  16835809 tttattctgaagggacatt--tatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaagggactatggtcttaagaa 16835712  T
Q  223 cactcttaattctgaagggacagaaaaaaggagatgaagagaagaa 268  Q
    ||||||||| || ||||||||||| |||| ||||||||||||||||    
T  16835711 cactcttaaatccgaagggacaga-aaaatgagatgaagagaagaa 16835667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 99 - 268
Target Start/End: Complemental strand, 6407537 - 6407370
Alignment:
Q  99 agggactatgatcttaaac-tattatttattctgaagggacaaaaatatcgaagggactatattcttaagaccattcttaattccgagaggacattatac 197  Q
    ||||||||||||||||||  || | |||||||||||||||||    |||| |||||||||| || ||||||||||||||||||||||  | |||||| ||    
T  6407537 agggactatgatcttaaaagtactctttattctgaagggacatt--tatc-aagggactatgtttttaagaccattcttaattccgaaggaacattaaac 6407441  T
Q  198 c-aaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaaaaaggagatgaagagaagaa 268  Q
    | ||||||  || | | |||||||||||||||||| || ||||||||||| |||||||||||||||||||||    
T  6407440 cgaaaaagggactatggtcttaagaacactcttaaatccgaagggacaga-aaaaggagatgaagagaagaa 6407370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 99 - 268
Target Start/End: Complemental strand, 11570424 - 11570253
Alignment:
Q  99 agggactatgatcttaaac-tattatttattctgaagggacaaaaat-atcgaagggactatattcttaagaccattcttaattccgagaggacattata 196  Q
    ||||||||||||||||||  || | |||| || ||||||||| | || |||||| ||||||| || ||||||||||||||||||||||  |||||||| |    
T  11570424 agggactatgatcttaaaagtactctttaatccgaagggacatatattatcgaatggactatgtttttaagaccattcttaattccgaagggacattaaa 11570325  T
Q  197 ccaaaa-agaaaccaagatcttaagaacactcttaattctgaagggacagaaaaaaggagatgaagagaagaa 268  Q
     | ||| ||  || | | ||||||||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  11570324 tcgaaagagggactatggtcttaagaacactcttaattccgaagggacaga-aaaaggagatgaagagaagaa 11570253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 96 - 270
Target Start/End: Complemental strand, 19995076 - 19994902
Alignment:
Q  96 aaaagggactatgatcttaaactattatttattctgaagggaca-aaaatatcgaagggactatattcttaagaccattcttaattccgagaggacatta 194  Q
    |||||||||||||||| |||| || | ||||||||||||||||| | | ||| ||||||||||| || |||| ||| |||||||||| ||  ||||||||    
T  19995076 aaaagggactatgatcctaaagtactctttattctgaagggacatacattatagaagggactatgtttttaaaacctttcttaattctgaagggacatta 19994977  T
Q  195 taccaaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaaaaaggagatgaagagaagaata 270  Q
    |||  || ||  || |||||||||| |||||||||| ||  |||||||||| ||||||||||| | ||||||||||    
T  19994976 tactgaatagggactaagatcttaaaaacactcttattttcgaagggacag-aaaaaggagattaggagaagaata 19994902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 105 - 268
Target Start/End: Complemental strand, 20747974 - 20747810
Alignment:
Q  105 tatgatcttaaac-tattatttattctgaagggacaaaaat-atcgaagggactatattcttaagaccattcttaattccgagaggacattataccaaaa 202  Q
    ||||||||||||  |||| ||||||| ||||||||| | || ||| |||||||||| || |||||| |||||||||||||||  |||||||||| |  ||    
T  20747974 tatgatcttaaaaatattctttattccgaagggacatatattatcaaagggactatgtttttaagatcattcttaattccgaagggacattatatcggaa 20747875  T
Q  203 agaaaccaagatcttaagaacactcttaattctgaagggacagaaaaaaggagatgaagagaagaa 268  Q
    ||| || | | ||||||||||| ||||||||  ||||||||| | |||||||||||||||||||||    
T  20747874 agagactatggtcttaagaacattcttaatttcgaagggaca-agaaaaggagatgaagagaagaa 20747810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 150 - 268
Target Start/End: Original strand, 11428427 - 11428546
Alignment:
Q  150 agggactatattcttaagaccattcttaattccgagaggacattatacc-aaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaa 248  Q
    ||||||||| || |||||| |||| ||||||||||  | |||||| ||| ||||||  || | | ||||||||||||||| ||||| |||||||||||||    
T  11428427 agggactatgtttttaagatcattattaattccgaaggaacattaaaccgaaaaagggactatggtcttaagaacactctcaattcggaagggacagaaa 11428526  T
Q  249 aaaggagatgaagagaagaa 268  Q
    ||||||||||||||||||||    
T  11428527 aaaggagatgaagagaagaa 11428546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 99 - 268
Target Start/End: Original strand, 12689391 - 12689560
Alignment:
Q  99 agggactatgatcttaaac-tattatttattctgaagggacaaaaat-atcgaagggactatattcttaagaccattcttaattccgagaggacattata 196  Q
    ||||||||||||||||||  || |||||||||||||| |||| | || || ||||||||||| || ||||||||||||||||||||||  |||| ||| |    
T  12689391 agggactatgatcttaaaagtactatttattctgaagagacatatattattgaagggactatgtt-ttaagaccattcttaattccgaagggacgttaaa 12689489  T
Q  197 ccaaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaaaaaggagatgaagagaagaa 268  Q
    || ||||   || | | |||||| |||||||||||||| |||||||| |  |||||||||||||||||||||    
T  12689490 ccgaaaatggactatggtcttaaaaacactcttaattccgaagggactg-taaaaggagatgaagagaagaa 12689560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 99 - 268
Target Start/End: Complemental strand, 11559896 - 11559725
Alignment:
Q  99 agggactatgatcttaaac-tattatttattctgaagggacaaaaat-atcgaagggactatattcttaagaccattcttaattccgagaggacattata 196  Q
    ||||||||||||||||||  || | ||||||| ||||||||| | || ||| || ||||||| || ||||||||||||||||||||||  |||||||| |    
T  11559896 agggactatgatcttaaaagtactctttattccgaagggacatatattatcaaatggactatgtttttaagaccattcttaattccgaagggacattaaa 11559797  T
Q  197 ccaaaa-agaaaccaagatcttaagaacactcttaattctgaagggacagaaaaaaggagatgaagagaagaa 268  Q
       ||| ||  || | | ||||||||||||||||||||| |||||||||| |||| |||||||||||||||||    
T  11559796 ttgaaagagggactatggtcttaagaacactcttaattccgaagggacag-aaaatggagatgaagagaagaa 11559725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 95 - 268
Target Start/End: Complemental strand, 4157037 - 4156860
Alignment:
Q  95 aaaaagggactatgatcttaa-actattatttattctgaagggacaaaaat-atcgaagggactatattcttaagaccattcttaattccgagaggacat 192  Q
    ||||||||| ||||||||||| | || | ||||||| ||||||||  | || || |||| |||||| || ||||||||||||||||||||||  ||||||    
T  4157037 aaaaagggattatgatcttaataatactctttattccgaagggacttatattattgaagtgactatgtttttaagaccattcttaattccgaagggacat 4156938  T
Q  193 tataccaaaaagaaaccaagatcttaagaacactcttaattctgaagggacaga--aaaaaggagatgaagagaagaa 268  Q
    || ||| ||||   || | | ||||||||||| ||||||||| |||||||||||  ||||||||||| |||| |||||    
T  4156937 taaaccgaaaaaggactatggtcttaagaacaatcttaattccgaagggacagaagaaaaaggagataaagaaaagaa 4156860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 83 - 267
Target Start/End: Original strand, 22609942 - 22610133
Alignment:
Q  83 gacattataccaaaaaagggactatgatcttaaact-attatttattctgaagggaca--aaa---atatcgaagggactatattcttaagaccattctt 176  Q
    |||||||| ||  ||||||||||||||||||||| | ||| ||||||| ||||  |||  |||   ||||||||| ||||||  |||||| |||||||||    
T  22609942 gacattattcctgaaaagggactatgatcttaaaattattctttattccgaagaaacattaaatatatatcgaagagactatgctcttaaaaccattctt 22610041  T
Q  177 aattccgagaggacattataccaaaaagaaaccaagatcttaagaacactcttaattctgaagggac-agaaaaaaggagatgaagagaaga 267  Q
    ||||||||   ||||||||||| |||||  |  | | |||||||||||||||||||||  ||||||| | |||||||||||||| |||||||    
T  22610042 aattccgaagtgacattataccgaaaagggattatggtcttaagaacactcttaattcctaagggacaaaaaaaaaggagatgaggagaaga 22610133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 86 - 250
Target Start/End: Complemental strand, 24588893 - 24588727
Alignment:
Q  86 attataccaaaaaagggactatgatcttaaactattatttattctgaagggacaaaaata-tcgaagggactatattcttaagaccattcttaattccga 184  Q
    |||||||| ||||||| ||| |||||||||| ||||||||||||| ||  |||| ||||| | ||||||| |||  |||||||||||||||| |||||||    
T  24588893 attataccgaaaaagg-actgtgatcttaaaatattatttattctaaaaagacataaataattgaagggattatgctcttaagaccattcttgattccga 24588795  T
Q  185 gaggacattataccaaaaagaaac--caagatcttaagaacactcttaattctgaagggacagaaaaa 250  Q
      ||||| |||||| ||||  |||   | | |||||| |||||| ||||||||||||||||| |||||    
T  24588794 agggacaatataccgaaaatgaactatatggtcttaaaaacacttttaattctgaagggacaaaaaaa 24588727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 100 - 268
Target Start/End: Complemental strand, 25314131 - 25313962
Alignment:
Q  100 gggactatgatcttaaac-tattatttattctgaagggacaaaaat-atcgaagggactatattcttaagaccattcttaattccgagaggacattatac 197  Q
    |||||||||||||||||  || | ||||||||||||||||| | || |||||| ||||||| || |||||| ||||||||||||  |  || ||||| ||    
T  25314131 gggactatgatcttaaaagtactctttattctgaagggacatatattatcgaaaggactatgtttttaagatcattcttaattcgaaaggggcattaaac 25314032  T
Q  198 caaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaaaaaggagatgaagagaagaa 268  Q
    ||  |||  || | | |||||| |||||||||||||| ||||||| || |||||||||||||||| |||||    
T  25314031 cagcaagggactatggtcttaaaaacactcttaattccgaagggatag-aaaaaggagatgaagaaaagaa 25313962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 100 - 268
Target Start/End: Complemental strand, 26201625 - 26201456
Alignment:
Q  100 gggactatgatcttaaac-tattatttattctgaagggacaaaaat-atcgaagggactatattcttaagaccattcttaattccgagaggacattatac 197  Q
    |||||||||||||||||  || | ||||||||||||||||| | || |||||| ||||||| || |||||| ||||||||||||  |  || ||||| ||    
T  26201625 gggactatgatcttaaaagtactctttattctgaagggacatatattatcgaaaggactatgtttttaagatcattcttaattcgaaaggggcattaaac 26201526  T
Q  198 caaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaaaaaggagatgaagagaagaa 268  Q
    ||  |||  || | | |||||| |||||||||||||| ||||||| || |||||||||||||||| |||||    
T  26201525 cagcaagggactatggtcttaaaaacactcttaattccgaagggatag-aaaaaggagatgaagaaaagaa 26201456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 86 - 268
Target Start/End: Original strand, 5856422 - 5856605
Alignment:
Q  86 attataccaaaaaagggactatgatcttaaactattatttattctgaagggacaaaaat-atcgaagggactatattcttaagaccattcttaattccga 184  Q
    ||||| |||||||||||||||||| |||||  |||| ||||||  ||||||||  | || |||||||||||||| || |||||||||||||||||| |||    
T  5856422 attattccaaaaaagggactatgaacttaatatattctttatttcgaagggacttatattatcgaagggactatgtttttaagaccattcttaatttcga 5856521  T
Q  185 gaggacattatacca-aaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaaaaaggagatgaagagaagaa 268  Q
       ||| |||||  |   |||  || | | | ||||||||||||||||||  |||||||| ||||||||||||| ||||||||||    
T  5856522 agagac-ttatattatcgaagggactatgtttttaagaacactcttaatttcgaagggacggaaaaaaggagatcaagagaagaa 5856605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 99 - 268
Target Start/End: Complemental strand, 11534386 - 11534215
Alignment:
Q  99 agggactatgatcttaaac-tattatttattctgaagggacaaaaat-atcgaagggactatattcttaagaccattcttaattccgagaggacattata 196  Q
    ||||||||||||||||||  |||| |||||||  |||||||| | || ||| || ||||||| || ||||||||||| ||||||||||  |||||||| |    
T  11534386 agggactatgatcttaaaagtattctttattcctaagggacatatattatcaaatggactatgtttttaagaccatttttaattccgaagggacattaaa 11534287  T
Q  197 ccaaaa-agaaaccaagatcttaagaacactcttaattctgaagggacagaaaaaaggagatgaagagaagaa 268  Q
       ||| ||  || | | ||||||||||||||||||||| ||||||||| ||| | |||||||||||||||||    
T  11534286 ttgaaagagggactatggtcttaagaacactcttaattccgaagggaca-aaacatggagatgaagagaagaa 11534215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 146 - 270
Target Start/End: Complemental strand, 12405986 - 12405863
Alignment:
Q  146 tcgaagggactatattcttaagaccattcttaattccgagaggacattataccaaaaagaaaccaagatcttaagaacactcttaattctgaagggacag 245  Q
    ||||| ||||||  || |||||||  |||||||||| ||  |||||||||||| || ||  || ||| ||||||||||||||||| ||| ||||||||||    
T  12405986 tcgaaaggactacgtttttaagacttttcttaattctgaagggacattataccgaatagggactaaggtcttaagaacactcttatttccgaagggacag 12405887  T
Q  246 aaaaaaggagatgaagagaagaata 270  Q
    | |||| ||||||| ||||||||||    
T  12405886 a-aaaatgagatgaggagaagaata 12405863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 99 - 268
Target Start/End: Complemental strand, 33687326 - 33687156
Alignment:
Q  99 agggactatgatcttaaac-tattatttattctgaagggacaaaaat-atcgaagggactatattcttaagaccattcttaattccgagaggacattata 196  Q
    ||||||||||||||||||  || | ||||||| ||||| ||| | || ||||||| |||||| || |||||||||| ||||||| |||  |||||||| |    
T  33687326 agggactatgatcttaaaagtactctttattccgaaggaacatatattatcgaagagactatgtt-ttaagaccatacttaattgcgaagggacattaaa 33687228  T
Q  197 cc-aaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaaaaaggagatgaagagaagaa 268  Q
    || ||||||  || | | ||||||||| |||||||||||||||||||  | |||||||||||||||| |||||    
T  33687227 ccgaaaaagggactatggtcttaagaagactcttaattctgaaggga-tggaaaaaggagatgaagaaaagaa 33687156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 99 - 248
Target Start/End: Complemental strand, 17964235 - 17964085
Alignment:
Q  99 agggactatgatcttaaac-tattatttattctgaagggacaaaaat-atcgaagggactatattcttaagaccattcttaattccgagaggacattata 196  Q
    ||||||||||||||||||  || | |||||| |||| ||||| | || |||||||||||||| || ||||||||||||||||||||||  |||||||| |    
T  17964235 agggactatgatcttaaaagtactctttattttgaatggacatatattatcgaagggactatgtt-ttaagaccattcttaattccgaagggacattaaa 17964137  T
Q  197 ccaaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaa 248  Q
     | ||||   || | | |||| ||||||||| |||||| |||||||||||||    
T  17964136 acgaaaaaggactatggtcttgagaacactcataattccgaagggacagaaa 17964085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 86 - 146
Target Start/End: Complemental strand, 15991363 - 15991304
Alignment:
Q  86 attataccaaaaaagggactatgatcttaaactattatttattctgaagggacaaaaatat 146  Q
    |||||||||||| ||| |||||||||||||| ||||||||||||| |||||||| ||||||    
T  15991363 attataccaaaagagg-actatgatcttaaaatattatttattcttaagggacataaatat 15991304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 96 - 281
Target Start/End: Complemental strand, 2760089 - 2759905
Alignment:
Q  96 aaaagggactatgatcttaaactattatttattctgaagggacaaaaat-atcgaagggactatattcttaagaccattcttaattccgagaggacatta 194  Q
    |||| |||||||| ||||||| ||||||||||||| ||| |||| |||| || || || |||||  ||||||||||||||||||  ||||  ||||| ||    
T  2760089 aaaatggactatggtcttaaaatattatttattctaaagagacataaataattgagggaactatgctcttaagaccattcttaaaaccgaagggacaata 2759990  T
Q  195 taccaaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaaaaaggagatgaagagaagaataacctgttaaca 281  Q
     ||| || || ||    | ||||||||||||||  |||||| |||||| || ||||||||||||| |||| |||||||  |||||||    
T  2759989 aaccgaacaggaattgtggtcttaagaacactc-aaattctaaagggatag-aaaaaggagatgaggagaggaataactcgttaaca 2759905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 101 - 177
Target Start/End: Complemental strand, 6112479 - 6112402
Alignment:
Q  101 ggactatgatcttaaactattatttattctgaagggaca-aaaatatcgaagggactatattcttaagaccattctta 177  Q
    |||||||||||||||| |||||||||||||  || |||| |||  || |||||||||||  |||||||||||||||||    
T  6112479 ggactatgatcttaaaatattatttattctagagagacataaacaattgaagggactatgctcttaagaccattctta 6112402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 153 - 230
Target Start/End: Original strand, 17599842 - 17599919
Alignment:
Q  153 gactatattcttaagaccattcttaattccgagaggacattataccaaaaagaaaccaagatcttaagaacactctta 230  Q
    |||||| || |||| ||| |||||||||||||  ||||||||||||||| |||||  ||| ||||||||||| |||||    
T  17599842 gactatgtttttaaaacctttcttaattccgaagggacattataccaaatagaaaataaggtcttaagaacattctta 17599919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 147 - 196
Target Start/End: Original strand, 35130037 - 35130086
Alignment:
Q  147 cgaagggactatattcttaagaccattcttaattccgagaggacattata 196  Q
    ||||| |||||| |||||||||||||||||||||||||  ||||||||||    
T  35130037 cgaagagactatgttcttaagaccattcttaattccgaatggacattata 35130086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 96 - 233
Target Start/End: Complemental strand, 22694990 - 22694851
Alignment:
Q  96 aaaagggactatgatcttaaac-tattatttattctgaagggacaaaaat-atcgaagggactatattcttaagaccattcttaattccgagaggacatt 193  Q
    |||||||||||||||||||||  || | ||||||| |||||| || | || || ||| | ||||| || |||||||| ||||||||||  |  |||||||    
T  22694990 aaaagggactatgatcttaaaagtactctttattccgaaggggcatacattattgaatgaactatgtttttaagacctttcttaattcttaagggacatt 22694891  T
Q  194 ataccaaaaagaaaccaagatcttaagaacactcttaatt 233  Q
    ||||| || ||  || ||| ||||||||||||||||||||    
T  22694890 ataccgaatagggactaaggtcttaagaacactcttaatt 22694851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 196
Target Start/End: Original strand, 14042038 - 14042104
Alignment:
Q  131 gaagggacaaaaat-atcgaagggactatattcttaagaccattcttaattccgagaggacattata 196  Q
    |||||||||||| | | |||||| ||||| ||||||||||||||||||||| |||  ||||||||||    
T  14042038 gaagggacaaaatttaccgaaggaactatgttcttaagaccattcttaatttcgaagggacattata 14042104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 281
Target Start/End: Complemental strand, 12799510 - 12799446
Alignment:
Q  216 ttaagaacactcttaattctgaagggacagaaaaaaggagatgaagagaagaataacctgttaaca 281  Q
    |||||||||||||||||| |||||||| | |||||| ||||| | ||||||||||||  |||||||    
T  12799510 ttaagaacactcttaattttgaagggata-aaaaaatgagataaggagaagaataactcgttaaca 12799446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 96 - 182
Target Start/End: Complemental strand, 32001862 - 32001774
Alignment:
Q  96 aaaagggactatgatcttaaac-tattatttattctgaagggacaaaaat-atcgaagggactatattcttaagaccattcttaattcc 182  Q
    |||||||||||||||| ||||  || || ||||| ||||| || | |||| |||||||| ||||| |||||| ||||||||||||||||    
T  32001862 aaaagggactatgatcgtaaaaatactaattattttgaagagatataaattatcgaaggaactatgttcttacgaccattcttaattcc 32001774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 80; Significance: 2e-37; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 99 - 268
Target Start/End: Complemental strand, 23665799 - 23665632
Alignment:
Q  99 agggactatgatcttaaac-tattatttattctgaagggacaaaaatatcgaagggactatattcttaagaccattcttaattccgagaggacattatac 197  Q
    ||||||||||||||||||  |||| |||||||||||||||||    ||||||||||||||| || ||||||||||||||||||||||  |||||||| ||    
T  23665799 agggactatgatcttaaaagtattctttattctgaagggacatt--tatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaac 23665702  T
Q  198 caaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaaaaaggagatgaagagaagaa 268  Q
    |||||||  || | | |||||||||||||||||| || ||||||||||| |||||||||||||||||||||    
T  23665701 caaaaagcgactatggtcttaagaacactcttaaatccgaagggacaga-aaaaggagatgaagagaagaa 23665632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 96 - 248
Target Start/End: Original strand, 8888322 - 8888474
Alignment:
Q  96 aaaagggactatgatcttaaactattatttattctgaagggacaaaaatatcgaagggactatattcttaagaccattcttaattccgagaggacattat 195  Q
    |||||||||||||||||||||  ||||||||||| |||| ||   || |||||||||||||||  ||||||||||||||||||||||||  ||||||||     
T  8888322 aaaagggactatgatcttaaaacattatttattccgaagagaatgaattatcgaagggactatgctcttaagaccattcttaattccgaagggacattaa 8888421  T
Q  196 accaaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaa 248  Q
    ||| |||||  || | | |||||||||||||||||||||||||||||||||||    
T  8888422 accgaaaagggactatggtcttaagaacactcttaattctgaagggacagaaa 8888474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 102 - 268
Target Start/End: Original strand, 27709353 - 27709518
Alignment:
Q  102 gactatgatcttaaac-tattatttattctgaagggacaaaaatatcgaagggactatattcttaagaccattcttaattccgagaggacattataccaa 200  Q
    |||||||||||||||  || | |||||||||||||||||    ||||||||||||||| || ||||||||||||||||||||||   ||||||| |||||    
T  27709353 gactatgatcttaaaaatactctttattctgaagggacatt--tatcgaagggactatgtttttaagaccattcttaattccgaagagacattaaaccaa 27709450  T
Q  201 aaagaaaccaagatcttaagaacactcttaattctgaagggacagaaaaaaggagatgaagagaagaa 268  Q
    |||| ||| | | ||||||||||||||||||||  ||||||||||||||||| |||||||||||||||    
T  27709451 aaaggaactatggtcttaagaacactcttaatttcgaagggacagaaaaaagtagatgaagagaagaa 27709518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 99 - 268
Target Start/End: Complemental strand, 24038047 - 24037880
Alignment:
Q  99 agggactatgatcttaaac-tattatttattctgaagggacaaaaatatcgaagggactatattcttaagaccattcttaattccgagaggacattatac 197  Q
    ||||||||||||||||||  |||| |||||||||||||||||    ||||||||||||||| || ||||||||||||||||||||||  |||||||| ||    
T  24038047 agggactatgatcttaaaagtattctttattctgaagggacatt--tatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaac 24037950  T
Q  198 caaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaaaaaggagatgaagagaagaa 268  Q
    | |||||  || | | |||||||||||||||||| || ||||||||||| |||||||||||||||||||||    
T  24037949 cgaaaagcgactatggtcttaagaacactcttaaatccgaagggacaga-aaaaggagatgaagagaagaa 24037880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 99 - 268
Target Start/End: Complemental strand, 23661140 - 23660973
Alignment:
Q  99 agggactatgatcttaaac-tattatttattctgaagggacaaaaatatcgaagggactatattcttaagaccattcttaattccgagaggacattatac 197  Q
    ||||||||||||||||||  |||| |||||||||||||||||    ||||||||||||||| || ||||||||||||||||||||||  |||||||| ||    
T  23661140 agggactatgatcttaaaagtattctttattctgaagggacatt--tatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaac 23661043  T
Q  198 caaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaaaaaggagatgaagagaagaa 268  Q
    | |||||  || | | |||||||||||||||||| || |||||||| | ||||||||||||||||||||||    
T  23661042 cgaaaagcgactatggtcttaagaacactcttaaatccgaagggac-ggaaaaaggagatgaagagaagaa 23660973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 86 - 281
Target Start/End: Complemental strand, 35456652 - 35456455
Alignment:
Q  86 attataccaaaaaagggactatgatcttaaactattatttattctgaagggacaaaaa-tatcgaagggactatattcttaagaccattcttaattccga 184  Q
    |||||||| |||||  ||||||||||||||| ||||||||||| ||| |||||| ||| |||| ||| || |||  ||||||||||||||||||||||||    
T  35456652 attataccgaaaaaaagactatgatcttaaaatattatttattttgatgggacataaactatcaaagagattatgctcttaagaccattcttaattccga 35456553  T
Q  185 gaggacattataccaaaaagaaaccaagatcttaagaacactcttaattctgaagggacaga-aaaaaggagatgaagagaagaataacctgttaaca 281  Q
      |||||||||||| || || ||  ||| |||||||||||||| |||||| ||||||||| | ||||| ||||||| | ||||||||||  |||||||    
T  35456552 agggacattataccgaataggaattaaggtcttaagaacactcataattccgaagggacaaagaaaaaagagatgaggtgaagaataactcgttaaca 35456455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 99 - 268
Target Start/End: Complemental strand, 758044 - 757873
Alignment:
Q  99 agggactatgatcttaaac-tattatttattctgaagggacaaaaat-atcgaagggactatattcttaagaccattcttaattccgagaggacattata 196  Q
    ||||||||||||||||||  || | |||| |||||||||||| | || |||||||||||||| || ||||||||||||||||||||||  |||||||| |    
T  758044 agggactatgatcttaaaagtactctttaatctgaagggacatatattatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaa 757945  T
Q  197 cc-aaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaaaaaggagatgaagagaagaa 268  Q
    || ||||||  || | | |||||||||||||||||| || |||||||||| ||||||||||||||||||||||    
T  757944 ccgaaaaagggactatggtcttaagaacactcttaaatccgaagggacag-aaaaaggagatgaagagaagaa 757873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 96 - 248
Target Start/End: Original strand, 3034035 - 3034187
Alignment:
Q  96 aaaagggactatgatcttaaactattatttattctgaagggacaaaaatatcgaagggactatattcttaagaccattcttaattccgagaggacattat 195  Q
    |||||||||||||||||||||  ||||||||||| |||| ||   || |||||||||||||||  | ||||||||||||||||||||||  ||||||||     
T  3034035 aaaagggactatgatcttaaaacattatttattccgaagagaatgaattatcgaagggactatgctgttaagaccattcttaattccgaagggacattaa 3034134  T
Q  196 accaaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaa 248  Q
    ||| |||||  || | | ||||||||||||||||||||| |||||||||||||    
T  3034135 accgaaaagggactatggtcttaagaacactcttaattccgaagggacagaaa 3034187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 96 - 245
Target Start/End: Original strand, 3693010 - 3693159
Alignment:
Q  96 aaaagggactatgatcttaaactattatttattctgaagggacaaaaatatcgaagggactatattcttaagaccattcttaattccgagaggacattat 195  Q
    |||||||||||||||||||||  ||||||||||| |||| ||   || |||||||||||||||  | ||||||||||||||||||||||  ||||||||     
T  3693010 aaaagggactatgatcttaaaacattatttattccgaagagaatgaattatcgaagggactatgctgttaagaccattcttaattccgaagggacattaa 3693109  T
Q  196 accaaaaagaaaccaagatcttaagaacactcttaattctgaagggacag 245  Q
    ||| |||||  || | | ||||||||||||||||||||| ||||||||||    
T  3693110 accgaaaagggactatggtcttaagaacactcttaattccgaagggacag 3693159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 13 - 268
Target Start/End: Complemental strand, 12965646 - 12965396
Alignment:
Q  13 attctaacatctaacttattcaagaatggaataagaatatattttaagatctatcataatttttcgaagtgacattataccaaaaaagggactatgatct 112  Q
    |||||||| |||||||| ||||||| |  || |||| ||||||||||||||  || |||||||  |||| ||||||||||  |||| |||||||||||||    
T  12965646 attctaacgtctaacttcttcaagagtcaaagaaga-tatattttaagatcattcgtaatttt--gaag-gacattatactgaaaa-gggactatgatct 12965552  T
Q  113 taaactattatttattctgaaggg-acaaaaatatcgaagggactatattcttaagaccattcttaattccgagaggacattataccaaaaagaaaccaa 211  Q
    |||| |||||||||||| ||| |  | ||||||| ||||||||||||   ||||||||||||||||||| |||  |||||||| ||| |||||  |  |     
T  12965551 taaattattatttattccgaatgatataaaaataccgaagggactatgaacttaagaccattcttaatttcgaagggacattaaaccgaaaagggagtat 12965452  T
Q  212 gatcttaagaacactcttaattctgaagggacagaaaaaaggagatgaagagaagaa 268  Q
    | |||| |||||| ||||||||| |||||||||| ||| ||||||||||||||||||    
T  12965451 ggtcttcagaacattcttaattccgaagggacag-aaataggagatgaagagaagaa 12965396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 96 - 248
Target Start/End: Original strand, 8070070 - 8070222
Alignment:
Q  96 aaaagggactatgatcttaaactattatttattctgaagggacaaaaatatcgaagggactatattcttaagaccattcttaattccgagaggacattat 195  Q
    ||||| |||||||||||||||  ||||||||||| |||| ||   || |||||||||||||||  | ||||||||||||||||||||||  ||||||||     
T  8070070 aaaagcgactatgatcttaaaacattatttattccgaagagaatgaattatcgaagggactatgctgttaagaccattcttaattccgaagggacattaa 8070169  T
Q  196 accaaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaa 248  Q
    ||| |||||  || | | ||||||||||||||||||||| |||||||||||||    
T  8070170 accgaaaagggactatggtcttaagaacactcttaattccgaagggacagaaa 8070222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 96 - 248
Target Start/End: Original strand, 8883562 - 8883714
Alignment:
Q  96 aaaagggactatgatcttaaactattatttattctgaagggacaaaaatatcgaagggactatattcttaagaccattcttaattccgagaggacattat 195  Q
    |||||||||||||||||||||  ||||||||||| |||| ||   || ||||||||| |||||  ||||||||||||| ||||||||||  ||||||||     
T  8883562 aaaagggactatgatcttaaaacattatttattccgaagagaatgaattatcgaaggtactatgctcttaagaccatttttaattccgaagggacattaa 8883661  T
Q  196 accaaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaa 248  Q
    ||| |||||  || | | ||||||||||||||||||||| |||||||||||||    
T  8883662 accgaaaagggactatggtcttaagaacactcttaattccgaagggacagaaa 8883714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 99 - 268
Target Start/End: Original strand, 55326194 - 55326364
Alignment:
Q  99 agggactatgatcttaaac-tattatttattctgaagggacaaaaat-atcgaagggactatattcttaagaccattcttaattccgagaggacattata 196  Q
    ||||||||||||||||||  || | ||||||||||||||||| | || |||||||||| ||| || |||||||||||||||||||||| ||||||||  |    
T  55326194 agggactatgatcttaaaagtactctttattctgaagggacatatattatcgaagggattatgtt-ttaagaccattcttaattccga-aggacattcaa 55326291  T
Q  197 ccaaaaagaaaccaagatcttaagaacactcttaattctgaagggacag-aaaaaaggagatgaagagaagaa 268  Q
    || |||||  || | | ||||||||||||||||||||| |||||||||| ||||||| |||||||||||||||    
T  55326292 ccgaaaagcgactatggtcttaagaacactcttaattccgaagggacagaaaaaaagaagatgaagagaagaa 55326364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 99 - 248
Target Start/End: Original strand, 18467643 - 18467793
Alignment:
Q  99 agggactatgatcttaaac-tattatttattctgaagggacaaaaat-atcgaagggactatattcttaagaccattcttaattccgagaggacattata 196  Q
    ||||||||||||||||||  || | ||||||||||||||||| | || |||||||||||||| || ||||||||||||||||||||||  |||||||| |    
T  18467643 agggactatgatcttaaaagtactctttattctgaagggacatatattatcgaagggactatgtt-ttaagaccattcttaattccgaagggacattaaa 18467741  T
Q  197 ccaaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaa 248  Q
    || |||||  || | ||||||||||||||||||| ||| |||||||||||||    
T  18467742 ccgaaaagggactatgatcttaagaacactcttatttccgaagggacagaaa 18467793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 99 - 268
Target Start/End: Original strand, 29350658 - 29350827
Alignment:
Q  99 agggactatgatcttaaac-tattatttattctgaagggacaaaaat-atcgaagggactatattcttaagaccattcttaattccgagaggacattata 196  Q
    ||||||||||||||||||  |||| ||||||||||||||||| | || |||||||||||||| || ||||||||||| |||||||| |  |||||||| |    
T  29350658 agggactatgatcttaaaaatattctttattctgaagggacatatattatcgaagggactatgtt-ttaagaccattattaattccaaagggacattaaa 29350756  T
Q  197 ccaaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaaaaaggagatgaagagaagaa 268  Q
    || |||||  || | ||||||||||||||||||||||  |||||||| | ||||| ||||||||||||||||    
T  29350757 ccgaaaagggactatgatcttaagaacactcttaatttcgaagggac-ggaaaaatgagatgaagagaagaa 29350827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 96 - 244
Target Start/End: Original strand, 3672978 - 3673126
Alignment:
Q  96 aaaagggactatgatcttaaactattatttattctgaagggacaaaaatatcgaagggactatattcttaagaccattcttaattccgagaggacattat 195  Q
    |||||||||||||||||||||  ||||||||||| |||| ||   || |||| ||||||||||  | ||||||||||||||||||||||  ||||||||     
T  3672978 aaaagggactatgatcttaaaacattatttattccgaagagaatgaattatcaaagggactatgctgttaagaccattcttaattccgaagggacattaa 3673077  T
Q  196 accaaaaagaaaccaagatcttaagaacactcttaattctgaagggaca 244  Q
    ||| |||||  || | | ||||||||||||||||||||| |||||||||    
T  3673078 accgaaaagggactatggtcttaagaacactcttaattccgaagggaca 3673126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 163 - 268
Target Start/End: Original strand, 20520438 - 20520543
Alignment:
Q  163 ttaagaccattcttaattccgagaggacattataccaaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaaaaaggagatgaaga 262  Q
    |||||| |||||||||||||||  |||||||| ||| |||||  || | | ||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  20520438 ttaagatcattcttaattccgaagggacattaaaccgaaaagggactatggtcttaagaacactcttaattccgaagggacaaaaaaaaggagatgaaga 20520537  T
Q  263 gaagaa 268  Q
    ||||||    
T  20520538 gaagaa 20520543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 149 - 268
Target Start/End: Complemental strand, 7570844 - 7570725
Alignment:
Q  149 aagggactatattcttaagaccattcttaattccgagaggacattatacc-aaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaa 247  Q
    |||||||||| || |||||||||||||||||| |||  |||||||| ||| ||||||  || | | |||||||||||||||||| || |||||||||||     
T  7570844 aagggactatgtttttaagaccattcttaatttcgaagggacattaaaccgaaaaagggactatggtcttaagaacactcttaaatccgaagggacaga- 7570746  T
Q  248 aaaaggagatgaagagaagaa 268  Q
    |||||||||||||||||||||    
T  7570745 aaaaggagatgaagagaagaa 7570725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 95 - 281
Target Start/End: Complemental strand, 17025785 - 17025598
Alignment:
Q  95 aaaaagggactatgatcttaaac-tattatttattctgaagggacaaaaat-atcgaagggactatattcttaagaccattcttaattccgagaggacat 192  Q
    |||||||||||||| |||||||  || | ||||||||||||||||| | || |||||||| ||||| ||||||||| | ||||||||| |||  ||| |     
T  17025785 aaaaagggactatggtcttaaaaatactttttattctgaagggacatatattatcgaaggaactatgttcttaagaactttcttaatttcgaagggataa 17025686  T
Q  193 tataccaaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaaaaaggagatgaagagaagaataacctgttaaca 281  Q
    |||||| || |   || ||| |||||||||||||||||| |||||||||| |||||||| ||||||  ||||||||||||  |||||||    
T  17025685 tataccgaacatggacgaaggtcttaagaacactcttaaatctgaagggaaagaaaaaa-gagatggggagaagaataactcgttaaca 17025598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 86 - 248
Target Start/End: Complemental strand, 10585903 - 10585740
Alignment:
Q  86 attataccaaaaaagggactatgatcttaaactattatttattctgaagggacaaaaat-atcgaagggactatattcttaagaccattcttaattccga 184  Q
    |||||||| |||||||||| ||||||||||| ||||||||||||| | | |||| |||| || |||||||||||  ||||||||||||||||| ||||||    
T  10585903 attataccgaaaaagggaccatgatcttaaaatattatttattctaatgagacataaataattgaagggactatgctcttaagaccattcttatttccga 10585804  T
Q  185 gaggacattataccaaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaa 248  Q
     |||| | || ||| |  |   || | | |||||| |||||||||||||| |||||||||||||    
T  10585803 aaggataataaaccgatgatggactatggtcttaaaaacactcttaattccgaagggacagaaa 10585740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 99 - 248
Target Start/End: Complemental strand, 14438374 - 14438226
Alignment:
Q  99 agggactatgatcttaaac-tattatttattctgaagggacaaaaatatcgaagggactatattcttaagaccattcttaattccgagaggacattatac 197  Q
    ||||||||||||||||||  || | ||||||||||||| |||    ||||||||||||||| || ||||||||||||||||||||||  |||||||| ||    
T  14438374 agggactatgatcttaaaagtactctttattctgaaggaacatt--tatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaac 14438277  T
Q  198 caaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaa 248  Q
    | |||||  || | | ||||||||| ||||||| ||| |||||||||||||    
T  14438276 cgaaaagggactatggtcttaagaatactcttatttccgaagggacagaaa 14438226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 123 - 268
Target Start/End: Original strand, 46964452 - 46964598
Alignment:
Q  123 tttattctgaagggacaaaaat-atcgaagggactatattcttaagaccattcttaattccgagaggacattatacc-aaaaagaaaccaagatcttaag 220  Q
    ||||||||||||||||| | || ||||||| |||||| || |||||||||||||||||||  |  |||||||| ||| ||||||  || | | |||||||    
T  46964452 tttattctgaagggacatatattatcgaagagactatgtttttaagaccattcttaattctaaagggacattaaaccgaaaaagggactatggtcttaag 46964551  T
Q  221 aacactcttaattctgaagggacagaaaaaaggagatgaagagaagaa 268  Q
    |||||||||||||| |||| || || ||||||||||||||||||||||    
T  46964552 aacactcttaattccgaagtgatag-aaaaaggagatgaagagaagaa 46964598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 96 - 248
Target Start/End: Complemental strand, 45904249 - 45904096
Alignment:
Q  96 aaaagggactatgatcttaaactattatttattctgaagggacaaaaata-tcgaagggactatattcttaagaccattcttaattccgagaggacatta 194  Q
    |||| |||| ||||||||||| ||||||||||||| ||| |||| ||||| | |||||||||||  ||||||||||||||||| |||||| |||| | ||    
T  45904249 aaaatggaccatgatcttaaaatattatttattctaaagagacataaataattgaagggactatgctcttaagaccattcttatttccgaaaggatagta 45904150  T
Q  195 taccaaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaa 248  Q
     ||| |  |   || | | ||||||||||||||||||||| |||||||||||||    
T  45904149 aaccgacgatggactatggtcttaagaacactcttaattccgaagggacagaaa 45904096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 102 - 244
Target Start/End: Complemental strand, 39775401 - 39775258
Alignment:
Q  102 gactatgatcttaaac-tattatttattctgaagggacaaaaat-atcgaagggactatattcttaagaccattcttaattccgagaggacattatacca 199  Q
    |||||||||||||||  || ||||||||||||||||||| | || |||| | ||||||| || ||||||||||||||||||||||  |||||||| |||     
T  39775401 gactatgatcttaaaagtactatttattctgaagggacatatattatcgcaaggactatgtt-ttaagaccattcttaattccgaagggacattaaaccc 39775303  T
Q  200 aaaagaaaccaagatcttaagaacactcttaattctgaagggaca 244  Q
    |||||  || | | |||||| |||||||||||||| |||||||||    
T  39775302 aaaagggactatggtcttaataacactcttaattccgaagggaca 39775258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 99 - 248
Target Start/End: Original strand, 18472425 - 18472575
Alignment:
Q  99 agggactatgatcttaaac-tattatttattctgaagggacaaaaat-atcgaagggactatattcttaagaccattcttaattccgagaggacattata 196  Q
    ||||||||| ||||||||  || | |||||||| |||||||| | || |||||||||||||| || ||||||||||||||||||| ||  |||||||| |    
T  18472425 agggactatcatcttaaaagtactctttattctaaagggacatatattatcgaagggactatgtt-ttaagaccattcttaattctgaagggacattaaa 18472523  T
Q  197 ccaaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaa 248  Q
    || |||||  || | | ||||||||||||||||| ||||||||||| |||||    
T  18472524 ccgaaaagggactatggtcttaagaacactcttatttctgaagggatagaaa 18472575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 147 - 268
Target Start/End: Original strand, 3419454 - 3419575
Alignment:
Q  147 cgaagggactatattcttaagaccattcttaattccgagaggacattatacc-aaaaagaaaccaagatcttaagaacactcttaattctgaagggacag 245  Q
    |||| ||||||| || ||||||||||||||||||||||  | |||||| ||| ||||||  || | | |||||||||||| |||||||| |||||||||     
T  3419454 cgaaaggactatgtttttaagaccattcttaattccgaaggaacattaaaccgaaaaagggactatggtcttaagaacacccttaattccgaagggaca- 3419552  T
Q  246 aaaaaaggagatgaagagaagaa 268  Q
     ||||||||||||||||||||||    
T  3419553 taaaaaggagatgaagagaagaa 3419575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 13 - 129
Target Start/End: Complemental strand, 12971405 - 12971291
Alignment:
Q  13 attctaacatctaacttattcaagaatggaataagaatatattttaagatctatcataatttttcgaagtgacattataccaaaaaagggactatgatct 112  Q
    ||||||||  ||||| | ||||||| | ||| |||||||||||||||||||  || |||||||  |||| ||||||||||  |||||||||||||| |||    
T  12971405 attctaacgactaacctcttcaagagtcgaagaagaatatattttaagatcattcgtaatttt--gaagggacattatactgaaaaagggactatgttct 12971308  T
Q  113 taaactattatttattc 129  Q
    |||| ||||||||||||    
T  12971307 taaattattatttattc 12971291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 144 - 268
Target Start/End: Complemental strand, 3656858 - 3656738
Alignment:
Q  144 tatcgaagggactatattcttaagaccattcttaattccgagaggacattatacc-aaaaagaaaccaagatcttaagaacactcttaattctgaaggga 242  Q
    ||||||||||||||| ||    |||||||||| |||| |||  |||||||| ||| ||||||  || | | ||||||||||||||||||||| |||||||    
T  3656858 tatcgaagggactatgtt----agaccattctgaatttcgaagggacattaaaccgaaaaagggactatggtcttaagaacactcttaattccgaaggga 3656763  T
Q  243 cagaaaaaaggagatgaagagaagaa 268  Q
    || |||||||||||||||||||||||    
T  3656762 ca-aaaaaaggagatgaagagaagaa 3656738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 96 - 270
Target Start/End: Complemental strand, 10708383 - 10708208
Alignment:
Q  96 aaaagggactatgatcttaa-actattatttattctgaagggacaaaaat-atcgaagggactatattcttaagaccattcttaattccgagaggacatt 193  Q
    |||||||||||||||||||| | || | ||||||| ||| ||||| | || ||||||||| |||| || |||| ||| || |||||||| |  |||||||    
T  10708383 aaaagggactatgatcttaataatactttttattccgaatggacatatattatcgaaggggctatgtttttaaaaccttttttaattccaaagggacatt 10708284  T
Q  194 ataccaaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaaaaaggagatgaagagaagaata 270  Q
    ||||| || |||||| ||| |||||| |||||||||| ||| ||| |||||  |||||||||||||  |||||||||    
T  10708283 ataccgaacagaaactaaggtcttaaaaacactcttatttccgaaaggaca-taaaaaggagatgagaagaagaata 10708208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 101 - 181
Target Start/End: Original strand, 49019800 - 49019881
Alignment:
Q  101 ggactatgatcttaaactattatttattctgaagggacaaaaat-atcgaagggactatattcttaagaccattcttaattc 181  Q
    |||||||||||||||| ||||||||||| | |||||||| |||| || |||||||||||| || |||||||||| |||||||    
T  49019800 ggactatgatcttaaaatattatttattttaaagggacataaataattgaagggactatactcctaagaccatttttaattc 49019881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 144 - 271
Target Start/End: Complemental strand, 25726406 - 25726280
Alignment:
Q  144 tatcgaagggactatattcttaagaccattcttaattccgagaggacattataccaaaaagaaaccaagatcttaagaacactcttaattctgaagggac 243  Q
    ||||||||||||||| ||||||||||  ||||||| | |||  ||||||||| |  || |   |  ||| ||||||||||| ||||||||  ||||||||    
T  25726406 tatcgaagggactatgttcttaagacatttcttaacttcgaagggacattatgctgaataaggattaaggtcttaagaacattcttaatttcgaagggac 25726307  T
Q  244 agaaaaaaggagatgaagagaagaataa 271  Q
    ||||||| ||||||||||||||||||||    
T  25726306 agaaaaa-ggagatgaagagaagaataa 25726280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 101 - 203
Target Start/End: Original strand, 28125524 - 28125627
Alignment:
Q  101 ggactatgatcttaaactattatttattctgaagggacaaaaata-tcgaagggactatattcttaagaccattcttaattccgagaggacattatacca 199  Q
    |||||||||||||||  ||||||||||||| ||| |||| || || | ||| |||||||  |||||||||||||||||||||||| | |||| ||||||     
T  28125524 ggactatgatcttaagatattatttattcttaagagacataattaattgaaaggactatgctcttaagaccattcttaattccgaaatgacaatataccg 28125623  T
Q  200 aaaa 203  Q
    ||||    
T  28125624 aaaa 28125627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 161 - 272
Target Start/End: Complemental strand, 32747763 - 32747652
Alignment:
Q  161 tcttaagaccattcttaattccgagaggacattataccaaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaaaaaggagatgaa 260  Q
    |||||||||||||||||||||  | |||||||| |||| |||||| ||   | | ||||| |||||||||||| ||  ||| |||||| ||||||||||     
T  32747763 tcttaagaccattcttaattcacaaaggacattgtaccgaaaagagactttggttttaagtacactcttaattttgctggggcagaaataaggagatgag 32747664  T
Q  261 gagaagaataac 272  Q
    ||||||||||||    
T  32747663 gagaagaataac 32747652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 131 - 196
Target Start/End: Complemental strand, 48432003 - 48431937
Alignment:
Q  131 gaagggacaaaaat-atcgaagggactatattcttaagaccattcttaattccgagaggacattata 196  Q
    |||||||||||| | |||||||||||||| ||||||||||||||||||||| |||  ||||||||||    
T  48432003 gaagggacaaaatttatcgaagggactatgttcttaagaccattcttaatttcgaagggacattata 48431937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 144 - 193
Target Start/End: Original strand, 4662573 - 4662622
Alignment:
Q  144 tatcgaagggactatattcttaagaccattcttaattccgagaggacatt 193  Q
    ||||||||||||||| |||||||||||||||||||||||||  |||||||    
T  4662573 tatcgaagggactatgttcttaagaccattcttaattccgaagggacatt 4662622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 86 - 244
Target Start/End: Complemental strand, 6596067 - 6595908
Alignment:
Q  86 attataccaaaaaagggactatgatcttaaactattatttattctgaagggacaaaaatatcgaagggactatattcttaagaccattcttaattccgag 185  Q
    ||||||||||||| | ||||||||| ||||| | ||||||||||  ||| ||   || |||||||||||||||  ||||||| |||||||| |||||||     
T  6596067 attataccaaaaa-gagactatgattttaaaattttatttattcctaagagaatgaattatcgaagggactatgctcttaagcccattcttgattccgaa 6595969  T
Q  186 aggacattataccaaaaagaaac--caagatcttaagaacactcttaattctgaagggaca 244  Q
    |||||| ||||||   |||  ||   | ||||||||||| ||||||||||| |||||||||    
T  6595968 aggacaatataccggcaagggactatatgatcttaagaatactcttaattccgaagggaca 6595908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 214 - 265
Target Start/End: Original strand, 55431815 - 55431865
Alignment:
Q  214 tcttaagaacactcttaattctgaagggacagaaaaaaggagatgaagagaa 265  Q
    ||||||||||||||||||||| |||||||||  |||||||||||||||||||    
T  55431815 tcttaagaacactcttaattccgaagggaca-taaaaaggagatgaagagaa 55431865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 98 - 198
Target Start/End: Complemental strand, 12900745 - 12900644
Alignment:
Q  98 aagggactatgatcttaaactattatttattctgaagggacaaaaat-atcgaagggactatattcttaagaccattcttaattccgagaggacattata 196  Q
    ||||||||||||||||||| |||||||| |||| |||  ||| |||| ||  |||| |||||  |||||||||||| |||||||| ||| |||| |||||    
T  12900745 aagggactatgatcttaaaatattattttttctaaagaaacataaataattcaaggaactatgctcttaagaccatgcttaattctgaggggacgttata 12900646  T
Q  197 cc 198  Q
    ||    
T  12900645 cc 12900644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 270
Target Start/End: Complemental strand, 12899324 - 12899268
Alignment:
Q  214 tcttaagaacactcttaattctgaagggacagaaaaaaggagatgaagagaagaata 270  Q
    ||||| ||||||||||||||| ||||||||| ||| |||||||||  ||||||||||    
T  12899324 tcttatgaacactcttaattccgaagggacataaataaggagatggggagaagaata 12899268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 193
Target Start/End: Original strand, 16983375 - 16983419
Alignment:
Q  149 aagggactatattcttaagaccattcttaattccgagaggacatt 193  Q
    |||||||||| |||||||||||||||||||||||||  |||||||    
T  16983375 aagggactatgttcttaagaccattcttaattccgaagggacatt 16983419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 243
Target Start/End: Complemental strand, 9121716 - 9121674
Alignment:
Q  201 aaagaaaccaagatcttaagaacactcttaattctgaagggac 243  Q
    ||||| |||| ||||||||||||||||||||||| ||||||||    
T  9121716 aaagagaccatgatcttaagaacactcttaattccgaagggac 9121674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 268
Target Start/End: Complemental strand, 11997585 - 11997532
Alignment:
Q  216 ttaagaacactcttaattctgaagggacagaaaa-aaggagatgaagagaagaa 268  Q
    |||||| |||||||||||   ||||||||||||| |||||||||||||||||||    
T  11997585 ttaagagcactcttaatttcaaagggacagaaaagaaggagatgaagagaagaa 11997532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 247
Target Start/End: Complemental strand, 18699362 - 18699329
Alignment:
Q  214 tcttaagaacactcttaattctgaagggacagaa 247  Q
    ||||||||||||||||||||| ||||||||||||    
T  18699362 tcttaagaacactcttaattccgaagggacagaa 18699329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 173
Target Start/End: Original strand, 18011753 - 18011809
Alignment:
Q  118 tattatttattctgaagggacaaaaat-atcgaagggactatattcttaagaccatt 173  Q
    ||||||||||| ||||| |||| |||| |||||||||||||| || |||||||||||    
T  18011753 tattatttattttgaagcgacataaattatcgaagggactatgtttttaagaccatt 18011809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 212 - 272
Target Start/End: Original strand, 49020018 - 49020078
Alignment:
Q  212 gatcttaagaacactcttaattctgaagggacagaaaaaaggagatgaagagaagaataac 272  Q
    |||||||| |||||| ||| || ||||||||| | ||||||| ||| ||||||||||||||    
T  49020018 gatcttaaaaacacttttatttatgaagggacggtaaaaaggtgatcaagagaagaataac 49020078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 69; Significance: 6e-31; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 96 - 248
Target Start/End: Complemental strand, 9583 - 9431
Alignment:
Q  96 aaaagggactatgatcttaaactattatttattctgaagggacaaaaatatcgaagggactatattcttaagaccattcttaattccgagaggacattat 195  Q
    |||||||||||||||||||||  |||||||||||  ||| ||   || |||||||||||||||  ||||||||||||||||||||||||  ||||||||     
T  9583 aaaagggactatgatcttaaaacattatttattccaaagagaatgaattatcgaagggactatgctcttaagaccattcttaattccgaatggacattaa 9484  T
Q  196 accaaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaa 248  Q
    ||| |||||  || | | ||||||||||||||||||||| |||||||||||||    
T  9483 accgaaaagggactatggtcttaagaacactcttaattccgaagggacagaaa 9431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 67; Significance: 9e-30; HSPs: 2)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 95 - 268
Target Start/End: Original strand, 29588 - 29762
Alignment:
Q  95 aaaaagggactatgatcttaaactattatttattctgaagggacaaaaat-atcgaagggactatattcttaagaccattcttaattccgagaggacatt 193  Q
    |||||||||||||||||||||   | | || |||| ||||||||  | || ||| |||||||||| || ||||||||||||||||||| ||  |||||||    
T  29588 aaaaagggactatgatcttaatagactcttcattccgaagggacttatattatcaaagggactatgtttttaagaccattcttaattctgaagggacatt 29687  T
Q  194 ataccaaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaaaaaggagatgaagagaagaa 268  Q
    | ||| || ||  |  | ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  29688 aaaccgaagagggaatatgatcttaagaacactcttaattccgaagggacagaaaaaaggagatgaagagaagaa 29762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 95 - 268
Target Start/End: Original strand, 25868 - 26042
Alignment:
Q  95 aaaaagggactatgatcttaa-actattatttattctgaagggacaaaaat-atcgaagggactatattcttaagaccattcttaattccgagaggacat 192  Q
    ||||||||||||||||||||| |  | | ||||||| ||||||||  | || |||||||||||||| || |||||||||||||||||| |||  ||||||    
T  25868 aaaaagggactatgatcttaatagcactctttattccgaagggacttatattatcgaagggactatgtttttaagaccattcttaatttcgaagggacat 25967  T
Q  193 tataccaaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaaaaaggagatgaagagaagaa 268  Q
    || ||| |||||  || | | ||||||||||| || |||||| |||||||| ||||||||||||||||||||||||    
T  25968 taaaccgaaaagggactatggtcttaagaacaatcgtaattccgaagggac-gaaaaaaggagatgaagagaagaa 26042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 67; Significance: 9e-30; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 72 - 249
Target Start/End: Complemental strand, 146136 - 145956
Alignment:
Q  72 tttttcgaagtgacattatacc-aaaaaagggactatgatcttaaactattatttattctgaagggaca--aaaatatcgaagggactatattcttaaga 168  Q
    |||||||||| ||||||||||| ||||||| | ||||||||||||| |||||| ||||||||| |||||  |||||||||||||||||||  |||||| |    
T  146136 tttttcgaagggacattataccgaaaaaagaggctatgatcttaaaatattatatattctgaaaggacataaaaatatcgaagggactatgctcttaaaa 146037  T
Q  169 ccattcttaattccgagaggacattatacc-aaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaaa 249  Q
    ||||||||| ||  ||  |||||||||||| ||||||  || | | ||||||||| ||||||||||| ||||||||||||||    
T  146036 ccattcttatttttgaatggacattataccgaaaaagggactatgctcttaagaa-actcttaattccgaagggacagaaaa 145956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 247
Target Start/End: Original strand, 126913 - 126946
Alignment:
Q  214 tcttaagaacactcttaattctgaagggacagaa 247  Q
    ||||||||||||||||||||| ||||||||||||    
T  126913 tcttaagaacactcttaattccgaagggacagaa 126946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 66; Significance: 4e-29; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 95 - 270
Target Start/End: Complemental strand, 148073 - 147896
Alignment:
Q  95 aaaaagggactatgatcttaaac-tattatttattctgaagggacaaaaat-atcgaagggactatattcttaagaccattcttaattccgagaggacat 192  Q
    ||||||||||||||||||||||  |||| ||||||||||||||| | | || |||||| ||||||| || |||||| | |||||||||||||  ||||||    
T  148073 aaaaagggactatgatcttaaaagtattctttattctgaagggagatacattatcgaatggactatgtttttaagatctttcttaattccgatgggacat 147974  T
Q  193 tataccaaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaaaaaggagatgaagagaagaata 270  Q
    |||| | || ||  || ||| ||||||||||||||||| ||  ||||||| |||||||||||||||| ||||||||||    
T  147973 tatatcgaatagggactaaggtcttaagaacactcttattttcgaagggaaagaaaaaaggagatgaggagaagaata 147896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 94 - 270
Target Start/End: Original strand, 4386 - 4563
Alignment:
Q  94 aaaaaagggactatgatcttaaac-tattatttattctgaagggacaaaaat-atcgaagggactatattcttaagaccattcttaattccgagaggaca 191  Q
    |||||||| ||||||||||||||  |||| ||||||| ||||||||  | || ||||||||||||||  | ||||||| ||||||||||||||  |||||    
T  4386 aaaaaaggaactatgatcttaaaaatattctttattccgaagggacgtatattatcgaagggactatgcttttaagac-attcttaattccgaagggaca 4484  T
Q  192 ttataccaaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaaaaaggagatgaagagaagaata 270  Q
    ||||||| ||||  ||| | | |||||||||||| |||||||| ||||||||| ||| |||||||||| ||||||||||    
T  4485 ttataccgaaaatgaactatggtcttaagaacacacttaattccgaagggacataaataaggagatgaggagaagaata 4563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 99 - 268
Target Start/End: Original strand, 7524 - 7693
Alignment:
Q  99 agggactatgatcttaaac-tattatttattctgaagggacaaaaat-atcgaagggactatattcttaagaccattcttaattccgagaggacattata 196  Q
    ||||||||||||||||||  || | |||||||||||| |||| | || |||||||||||||| || |||||||||||||||||| |||  |||||||| |    
T  7524 agggactatgatcttaaaagtactctttattctgaagagacatatattatcgaagggactatgtt-ttaagaccattcttaatttcgaagggacattaaa 7622  T
Q  197 ccaaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaaaaaggagatgaagagaagaa 268  Q
    || |||||  || | | |||||| |||||||||||||| |||||||||| |||||||||||||||| |||||    
T  7623 ccgaaaagggactatggtcttaataacactcttaattccgaagggacag-aaaaaggagatgaagataagaa 7693  T

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Target: scaffold0060 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 96 - 248
Target Start/End: Complemental strand, 52620 - 52467
Alignment:
Q  96 aaaagggactatgatcttaaactattatttattctgaagggacaaaaata-tcgaagggactatattcttaagaccattcttaattccgagaggacatta 194  Q
    |||| |||| ||||||||||| ||||||||||||| ||| |||| ||||| | |||||||||||| ||||||||||||||||| |||||| |||| | ||    
T  52620 aaaacggaccatgatcttaaaatattatttattctaaagagacataaataattgaagggactatactcttaagaccattcttatttccgaaaggataata 52521  T
Q  195 taccaaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaa 248  Q
     ||| |  |   || | | |||||||||||||||||||||||||||||||||||    
T  52520 aaccgacgatggactatggtcttaagaacactcttaattctgaagggacagaaa 52467  T

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Target: scaffold0060; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 106 - 248
Target Start/End: Complemental strand, 47666 - 47523
Alignment:
Q  106 atgatcttaaactattatttattctgaagggacaaaaat-atcgaagggactatattcttaagaccattcttaattccgagaggacattataccaaaaag 204  Q
    ||||||||||| ||||||||||||| ||| |||| |||| || |||||| ||||  ||||||||||||||||| ||| || |||| | || ||| |  |     
T  47666 atgatcttaaaatattatttattctaaagagacataaataattgaaggggctatgctcttaagaccattcttatttctgaaaggataataaaccgacgat 47567  T
Q  205 aaaccaagatcttaagaacactcttaattctgaagggacagaaa 248  Q
      || | | ||||||||||||||||||||| |||||||||||||    
T  47566 ggactatggtcttaagaacactcttaattccgaagggacagaaa 47523  T

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Target: scaffold0020 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 86 - 248
Target Start/End: Complemental strand, 954 - 791
Alignment:
Q  86 attataccaaaaaagggactatgatcttaaactattatttattctgaagggacaaaaat-atcgaagggactatattcttaagaccattcttaattccga 184  Q
    |||||| | |||||||||| ||||||||||| ||||||||||||| ||| |||| |||| || |||||||||||  ||||||||||||||||| || |||    
T  954 attataacgaaaaagggaccatgatcttaaaatattatttattctaaagagacataaataattgaagggactatgctcttaagaccattcttattttcga 855  T
Q  185 gaggacattataccaaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaaa 248  Q
     |||| | || ||| |  |   || | ||||||||||||||| ||||||| |||||||||||||    
T  854 aaggataataaaccgacgatggactatgatcttaagaacacttttaattccgaagggacagaaa 791  T

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Target: scaffold0061 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 86 - 177
Target Start/End: Original strand, 46159 - 46251
Alignment:
Q  86 attataccaaaaaagggactatgatcttaaactattatttattctgaagggacaaaaat-atcgaagggactatattcttaagaccattctta 177  Q
    |||||||| |||||||||| |||||||||||  |||||||||||| ||| |||| |||| || |||||||||||  |||||||||||||||||    
T  46159 attataccgaaaaagggaccatgatcttaaaacattatttattctaaagagacataaataattgaagggactatggtcttaagaccattctta 46251  T

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Target: scaffold0061; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 248
Target Start/End: Complemental strand, 49568 - 49534
Alignment:
Q  214 tcttaagaacactcttaattctgaagggacagaaa 248  Q
    ||||||||||||||||||||| |||||||||||||    
T  49568 tcttaagaacactcttaattccgaagggacagaaa 49534  T

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Target: scaffold0017 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 86 - 177
Target Start/End: Complemental strand, 152628 - 152536
Alignment:
Q  86 attataccaaaaaagggactatgatcttaaactattatttattctgaagggacaaaaat-atcgaagggactatattcttaagaccattctta 177  Q
    |||||||| |||||||||| |||||||||||  |||||||||||| ||| |||| |||| || |||||||||||  |||||||||||||||||    
T  152628 attataccgaaaaagggaccatgatcttaaaacattatttattctaaagagacataaataattgaagggactatggtcttaagaccattctta 152536  T

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Target: scaffold0017; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 248
Target Start/End: Original strand, 149066 - 149100
Alignment:
Q  214 tcttaagaacactcttaattctgaagggacagaaa 248  Q
    ||||||||||||||||||||| |||||||||||||    
T  149066 tcttaagaacactcttaattccgaagggacagaaa 149100  T

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Target: scaffold0018 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 127 - 184
Target Start/End: Complemental strand, 171418 - 171361
Alignment:
Q  127 ttctgaagggacaaaaatatcgaagggactatattcttaagaccattcttaattccga 184  Q
    |||||||||||||||  ||||||||||||||  |||||||||||||||||||||||||    
T  171418 ttctgaagggacaaatttatcgaagggactacgttcttaagaccattcttaattccga 171361  T

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Target: scaffold0018; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 247
Target Start/End: Original strand, 21817 - 21850
Alignment:
Q  214 tcttaagaacactcttaattctgaagggacagaa 247  Q
    ||||||||||||||||||||| ||||||||||||    
T  21817 tcttaagaacactcttaattccgaagggacagaa 21850  T

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Target: scaffold0008 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 116 - 268
Target Start/End: Original strand, 256224 - 256377
Alignment:
Q  116 actattatttattctgaagggacaaaaata-tcgaagggactatattcttaagaccattcttaattccgagaggacattataccaaaaagaaaccaagat 214  Q
    ||||||||||||||||||| |||| ||||| | ||||||| | |   ||||| ||||||||| |||| ||  ||||| || ||| |||||  || | | |    
T  256224 actattatttattctgaagagacataaataattgaagggaatgtgcacttaataccattctttattctgaagggacaataaaccgaaaagggactacggt 256323  T
Q  215 cttaagaacactcttaattctgaagggacagaaaaaaggagatgaagagaagaa 268  Q
    |||||||||| ||||||||| ||| |||||||||||||||||| | ||||||||    
T  256324 cttaagaacattcttaattccgaatggacagaaaaaaggagataaggagaagaa 256377  T

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Target: scaffold0041 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 86 - 189
Target Start/End: Complemental strand, 35418 - 35314
Alignment:
Q  86 attataccaaaaaagggactatgatcttaaactattatttattctgaagggacaaaaat-atcgaagggactatattcttaagaccattcttaattccga 184  Q
    |||||||| |||||||||| ||||||||||| ||||||||||||| ||   ||| |||| || |||||||||||  ||||||||||||| ||| ||||||    
T  35418 attataccgaaaaagggaccatgatcttaaaatattatttattctaaacatacataaataattgaagggactatgctcttaagaccatttttatttccga 35319  T
Q  185 gagga 189  Q
     ||||    
T  35318 aagga 35314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 96 - 244
Target Start/End: Original strand, 83443 - 83595
Alignment:
Q  96 aaaagggactatgatcttaaactattatttattctgaagggaca-aaaatatcgaagggactatattcttaagaccattcttaattccgagaggacatta 194  Q
    |||| |||||||||||||||| ||||||||||||| || ||| | ||| ||| |||||||||||  |||||||||| ||||| |||| ||  ||||| ||    
T  83443 aaaatggactatgatcttaaaatattatttattctaaaaggatataaattattgaagggactatgctcttaagaccgttcttgattctgaagggacaata 83542  T
Q  195 tacc-aaaaagaaac--caagatcttaagaacactcttaattctgaagggaca 244  Q
    |||| | ||||  ||   | | ||||||||||||||||||||| |||||||||    
T  83543 taccgacaaagggactatatggtcttaagaacactcttaattccgaagggaca 83595  T

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Target: scaffold0045; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 248
Target Start/End: Original strand, 81325 - 81359
Alignment:
Q  214 tcttaagaacactcttaattctgaagggacagaaa 248  Q
    ||||||||||||||||||||| |||||||||||||    
T  81325 tcttaagaacactcttaattccgaagggacagaaa 81359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 247
Target Start/End: Original strand, 6773 - 6931
Alignment:
Q  89 ataccaaaaaagggactatgatcttaaactattatttattctgaagggacaaaaatatcgaagggactatattcttaagaccattcttaattccgagagg 188  Q
    ||||| || ||||||| ||||||||||| | ||||||||||| ||| |||| ||| |  |||| ||||||  |||||| ||||||||   ||| || |||    
T  6773 ataccgaacaagggaccatgatcttaaaatgttatttattctaaagagacataaaaaatgaagagactatgctcttaaaaccattctatgttctgaaagg 6872  T
Q  189 acattataccaaaaagaaaccaagatcttaagaacactcttaattctgaagggacagaa 247  Q
    |||||| ||  || ||  |  | | ||||||||||||||||||||| ||||||||||||    
T  6873 acattaaacagaagagggattatggtcttaagaacactcttaattccgaagggacagaa 6931  T

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Target: scaffold0226 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0226
Description:

Target: scaffold0226; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 150 - 196
Target Start/End: Complemental strand, 5943 - 5897
Alignment:
Q  150 agggactatattcttaagaccattcttaattccgagaggacattata 196  Q
    ||||||||| ||||||||||||||||||||| |||  ||||||||||    
T  5943 agggactatgttcttaagaccattcttaatttcgaagggacattata 5897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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