View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15941_low_99 (Length: 326)
Name: NF15941_low_99
Description: NF15941
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15941_low_99 |
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Alignment Details
Target: chr1 (Bit Score: 276; Significance: 1e-154; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 276; E-Value: 1e-154
Query Start/End: Original strand, 17 - 300
Target Start/End: Original strand, 37212860 - 37213143
Alignment:
| Q |
17 |
aactgggagtgagagaacttgtcaagatataaaactgaaagagaaatgattaagtatatagatatgaattggttatcatgactgttaacaacagttttag |
116 |
Q |
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| T |
37212860 |
aactgggagtgagagaacttgtcaagatataaaactgaaagagaaatgataaagtatatagatatgaattggttatcatgactgttaacaacagttttag |
37212959 |
T |
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| Q |
117 |
taatggaaatgatagtgcagaatccattgtacgctgtaaataacggcagttcaaagctaggtagcattactttagtatataattcatggtatgcccggca |
216 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37212960 |
taatggaaatgatagtgcagaatccattgtacgctgtaaataatggcagttcaaagctaggtagcattactttagtatataattcatggtatgcccggca |
37213059 |
T |
|
| Q |
217 |
aactttcactttgtatagtaataattctttatttgtgaaggaaattgtaaatatatattcttctttggtgagtttgacttcttc |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37213060 |
aactttcactttgtatagtaataattctttatttgtgaaggaaattgtaaatatatattcttctttggtgagtttgacttcttc |
37213143 |
T |
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