View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15944_low_10 (Length: 310)
Name: NF15944_low_10
Description: NF15944
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15944_low_10 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 294; Significance: 1e-165; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 294; E-Value: 1e-165
Query Start/End: Original strand, 1 - 310
Target Start/End: Complemental strand, 33791461 - 33791152
Alignment:
| Q |
1 |
tctgattataaaattgatgatcaaacacaaaagaagtgttttgatccaaaaacaccaatggatccttaccttcaacaccacaccattgaaccaacgtttt |
100 |
Q |
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| T |
33791461 |
tctgattataaaattgatgatcaaaaacaaaagaagtgttttgatccaaaaacactaatggatccttaccttcaacaccacaccattgaaccaacctttt |
33791362 |
T |
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| Q |
101 |
ccttaaattagggtccattgaactatcattactaccaagtctttttccaatgaaactacaatgagcaaatccaacagtgtgtgctcctaaaagtgtaacc |
200 |
Q |
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| T |
33791361 |
tcttaaattagggtccattgaactatcattactaccaagtctttttccaatgaaactacaatgagcaaatccaacagtgtgtgctcctaaaagtgtaacc |
33791262 |
T |
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| Q |
201 |
atttcttccaatgtcatacctttggatttaaaagcttgtaatgtttgagaaattgaggattctggccctggaagatgtacatcattaacagttgatacta |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33791261 |
atttcttccaatgtcatacctttggatttaaaagcttgtaatgtttgagaaattgaggattctggccctggaagatgtacatcattaacagttgatacta |
33791162 |
T |
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| Q |
301 |
atccatcacg |
310 |
Q |
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|||||||||| |
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| T |
33791161 |
atccatcacg |
33791152 |
T |
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