View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15945_low_32 (Length: 249)

Name: NF15945_low_32
Description: NF15945
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15945_low_32
NF15945_low_32
[»] chr8 (27 HSPs)
chr8 (16-239)||(8599402-8599624)
chr8 (111-179)||(37749992-37750060)
chr8 (112-186)||(14303158-14303232)
chr8 (111-179)||(41625194-41625262)
chr8 (111-186)||(6235544-6235619)
chr8 (111-187)||(574376-574452)
chr8 (141-185)||(12910829-12910873)
chr8 (111-186)||(7996933-7997008)
chr8 (141-184)||(8717498-8717541)
chr8 (111-174)||(15167055-15167117)
chr8 (120-179)||(26885640-26885699)
chr8 (111-186)||(28436540-28436615)
chr8 (111-178)||(29652219-29652286)
chr8 (111-185)||(19163529-19163603)
chr8 (111-185)||(19260572-19260646)
chr8 (112-186)||(37938488-37938562)
chr8 (114-179)||(27134416-27134481)
chr8 (117-186)||(29499764-29499833)
chr8 (141-186)||(33445563-33445608)
chr8 (118-179)||(42367729-42367790)
chr8 (145-186)||(44215816-44215857)
chr8 (141-185)||(6447183-6447227)
chr8 (111-186)||(8999884-8999960)
chr8 (111-167)||(9192220-9192276)
chr8 (141-185)||(27718917-27718961)
chr8 (141-185)||(30218197-30218241)
chr8 (141-181)||(30427729-30427769)
[»] chr2 (33 HSPs)
chr2 (110-187)||(346116-346193)
chr2 (112-185)||(29734685-29734758)
chr2 (111-186)||(4238752-4238827)
chr2 (111-182)||(23250313-23250384)
chr2 (111-186)||(29133477-29133552)
chr2 (111-185)||(6765604-6765678)
chr2 (111-185)||(29798510-29798584)
chr2 (141-186)||(9517032-9517077)
chr2 (141-186)||(37119281-37119326)
chr2 (114-185)||(6723073-6723144)
chr2 (141-184)||(20517017-20517060)
chr2 (118-173)||(25598562-25598617)
chr2 (111-190)||(44526117-44526196)
chr2 (145-187)||(17736785-17736827)
chr2 (142-184)||(19967413-19967455)
chr2 (141-179)||(25186265-25186303)
chr2 (115-173)||(25274826-25274884)
chr2 (141-179)||(32957566-32957604)
chr2 (141-187)||(33063978-33064024)
chr2 (141-179)||(34464432-34464470)
chr2 (111-181)||(44110948-44111018)
chr2 (141-186)||(3197102-3197147)
chr2 (145-186)||(3752802-3752843)
chr2 (145-178)||(16221373-16221406)
chr2 (111-179)||(19976153-19976222)
chr2 (116-185)||(41187455-41187524)
chr2 (141-185)||(7201501-7201545)
chr2 (141-185)||(9383232-9383276)
chr2 (119-179)||(12124545-12124605)
chr2 (141-189)||(16877114-16877162)
chr2 (141-189)||(16989245-16989293)
chr2 (143-187)||(33117430-33117474)
chr2 (141-173)||(41668661-41668693)
[»] chr7 (28 HSPs)
chr7 (111-179)||(8227349-8227417)
chr7 (111-192)||(19599132-19599213)
chr7 (112-185)||(23198743-23198816)
chr7 (118-186)||(43539104-43539172)
chr7 (125-188)||(20205813-20205876)
chr7 (110-189)||(34448602-34448681)
chr7 (141-186)||(3672575-3672620)
chr7 (131-187)||(42043079-42043135)
chr7 (144-188)||(45051688-45051732)
chr7 (111-186)||(35142142-35142217)
chr7 (141-187)||(30857240-30857286)
chr7 (141-179)||(31885968-31886006)
chr7 (111-189)||(40752832-40752910)
chr7 (141-179)||(44558797-44558835)
chr7 (110-179)||(7670434-7670503)
chr7 (141-182)||(10555366-10555407)
chr7 (141-186)||(21099796-21099841)
chr7 (111-172)||(27833394-27833455)
chr7 (119-172)||(29237558-29237611)
chr7 (145-186)||(47589580-47589621)
chr7 (141-186)||(48980480-48980525)
chr7 (141-185)||(5526719-5526763)
chr7 (112-176)||(7908596-7908660)
chr7 (141-173)||(9522918-9522950)
chr7 (141-185)||(10244721-10244765)
chr7 (141-177)||(37307897-37307933)
chr7 (141-185)||(39801700-39801744)
chr7 (145-185)||(46207754-46207794)
[»] chr6 (23 HSPs)
chr6 (111-187)||(24623310-24623386)
chr6 (110-187)||(655741-655818)
chr6 (115-186)||(9111040-9111111)
chr6 (111-186)||(12700414-12700489)
chr6 (111-173)||(24827058-24827120)
chr6 (141-185)||(9392691-9392735)
chr6 (111-187)||(9444949-9445025)
chr6 (111-186)||(29740475-29740550)
chr6 (141-188)||(32053779-32053826)
chr6 (116-178)||(33975930-33975993)
chr6 (143-186)||(34828299-34828342)
chr6 (141-187)||(9923232-9923278)
chr6 (111-189)||(14296950-14297028)
chr6 (141-179)||(20720804-20720842)
chr6 (141-179)||(32193882-32193920)
chr6 (141-179)||(33938702-33938740)
chr6 (141-186)||(8138481-8138526)
chr6 (112-185)||(13496110-13496183)
chr6 (111-180)||(15169930-15169999)
chr6 (111-180)||(15178702-15178771)
chr6 (111-184)||(20744133-20744206)
chr6 (143-184)||(31682929-31682970)
chr6 (141-185)||(21936056-21936100)
[»] chr4 (36 HSPs)
chr4 (111-186)||(19479470-19479545)
chr4 (111-185)||(3936621-3936695)
chr4 (141-187)||(28435271-28435317)
chr4 (111-186)||(22164262-22164337)
chr4 (111-186)||(24664984-24665059)
chr4 (111-189)||(18915039-18915117)
chr4 (143-185)||(35997993-35998035)
chr4 (141-186)||(34247433-34247478)
chr4 (117-186)||(38453258-38453327)
chr4 (118-187)||(43722757-43722826)
chr4 (141-185)||(22040644-22040688)
chr4 (129-173)||(36059034-36059078)
chr4 (111-187)||(49021758-49021834)
chr4 (141-185)||(56298147-56298191)
chr4 (111-178)||(11949756-11949823)
chr4 (111-186)||(16470297-16470372)
chr4 (141-184)||(19854560-19854603)
chr4 (141-188)||(52270053-52270100)
chr4 (141-187)||(2186356-2186402)
chr4 (111-185)||(9946421-9946495)
chr4 (141-187)||(15175133-15175179)
chr4 (141-187)||(16743307-16743353)
chr4 (144-186)||(19935187-19935229)
chr4 (111-185)||(32180824-32180898)
chr4 (111-185)||(35287500-35287574)
chr4 (117-178)||(897426-897487)
chr4 (141-182)||(7282554-7282595)
chr4 (110-187)||(14202471-14202548)
chr4 (116-185)||(14577505-14577574)
chr4 (133-178)||(22474681-22474726)
chr4 (141-186)||(30051890-30051935)
chr4 (120-185)||(36071138-36071203)
chr4 (145-185)||(9539220-9539260)
chr4 (145-185)||(9913893-9913933)
chr4 (110-186)||(35021459-35021535)
chr4 (119-187)||(50362140-50362208)
[»] chr1 (38 HSPs)
chr1 (111-185)||(44243867-44243941)
chr1 (141-186)||(3393591-3393636)
chr1 (111-186)||(32944729-32944804)
chr1 (111-185)||(17139510-17139584)
chr1 (111-184)||(2613717-2613790)
chr1 (111-188)||(17917131-17917208)
chr1 (141-186)||(29935976-29936021)
chr1 (117-186)||(37045145-37045214)
chr1 (111-187)||(32962555-32962631)
chr1 (141-181)||(34521213-34521253)
chr1 (111-187)||(40227821-40227897)
chr1 (141-185)||(44641521-44641565)
chr1 (141-185)||(48681956-48682000)
chr1 (110-173)||(18166608-18166671)
chr1 (116-186)||(21965889-21965960)
chr1 (141-184)||(24695554-24695597)
chr1 (111-189)||(7550886-7550964)
chr1 (141-179)||(12613180-12613218)
chr1 (141-187)||(23953170-23953215)
chr1 (141-179)||(24124853-24124891)
chr1 (141-187)||(42045395-42045441)
chr1 (145-179)||(45701328-45701362)
chr1 (141-186)||(4770651-4770696)
chr1 (118-179)||(17283951-17284012)
chr1 (141-190)||(26086918-26086967)
chr1 (141-182)||(28832194-28832235)
chr1 (120-189)||(29798118-29798187)
chr1 (111-176)||(31962450-31962515)
chr1 (141-186)||(35308178-35308223)
chr1 (145-186)||(39452453-39452494)
chr1 (141-181)||(8253737-8253777)
chr1 (141-185)||(12213987-12214031)
chr1 (145-185)||(25086477-25086517)
chr1 (117-173)||(26803450-26803506)
chr1 (141-185)||(27853349-27853393)
chr1 (141-185)||(28712558-28712602)
chr1 (141-185)||(31890772-31890816)
chr1 (145-185)||(48100716-48100756)
[»] chr5 (31 HSPs)
chr5 (111-179)||(26409253-26409321)
chr5 (141-187)||(12909189-12909235)
chr5 (141-186)||(18489099-18489144)
chr5 (111-187)||(6624768-6624844)
chr5 (111-171)||(26655472-26655532)
chr5 (111-171)||(26927057-26927117)
chr5 (118-186)||(37932323-37932391)
chr5 (111-186)||(10199012-10199087)
chr5 (111-185)||(15889405-15889479)
chr5 (141-187)||(17239404-17239450)
chr5 (141-179)||(26722917-26722955)
chr5 (141-179)||(26992666-26992704)
chr5 (141-187)||(27721698-27721744)
chr5 (141-179)||(27903113-27903151)
chr5 (141-179)||(33584084-33584122)
chr5 (112-186)||(37073762-37073836)
chr5 (111-188)||(5107238-5107315)
chr5 (111-188)||(11637565-11637642)
chr5 (121-185)||(8350664-8350728)
chr5 (145-185)||(10704358-10704398)
chr5 (112-176)||(13409553-13409617)
chr5 (111-179)||(13864344-13864412)
chr5 (141-185)||(16188818-16188862)
chr5 (141-185)||(16188920-16188964)
chr5 (124-184)||(17861974-17862034)
chr5 (141-185)||(18589890-18589934)
chr5 (141-189)||(20365495-20365543)
chr5 (141-189)||(30488915-30488963)
chr5 (141-173)||(31602848-31602880)
chr5 (141-185)||(40730218-40730262)
chr5 (141-185)||(42663227-42663271)
[»] chr3 (33 HSPs)
chr3 (141-188)||(43345030-43345077)
chr3 (141-186)||(21331440-21331485)
chr3 (111-180)||(48209204-48209273)
chr3 (141-186)||(53996292-53996337)
chr3 (116-192)||(13800654-13800730)
chr3 (111-186)||(3100214-3100289)
chr3 (111-186)||(7827501-7827576)
chr3 (141-176)||(39100107-39100142)
chr3 (111-185)||(7464484-7464558)
chr3 (115-185)||(28244101-28244171)
chr3 (111-185)||(38130952-38131026)
chr3 (141-187)||(42269290-42269336)
chr3 (141-179)||(43490440-43490478)
chr3 (116-186)||(44579629-44579699)
chr3 (124-186)||(46903901-46903963)
chr3 (141-186)||(3612205-3612250)
chr3 (110-187)||(4332659-4332736)
chr3 (143-184)||(5030200-5030241)
chr3 (141-186)||(7829889-7829934)
chr3 (141-186)||(10498718-10498763)
chr3 (120-169)||(32303370-32303419)
chr3 (145-186)||(51505866-51505907)
chr3 (111-172)||(52456488-52456549)
chr3 (143-188)||(55198873-55198918)
chr3 (118-186)||(1149069-1149137)
chr3 (141-185)||(2496549-2496593)
chr3 (111-186)||(4947819-4947895)
chr3 (141-185)||(7868716-7868760)
chr3 (141-189)||(7938714-7938762)
chr3 (141-173)||(10840424-10840456)
chr3 (114-170)||(19139427-19139483)
chr3 (141-185)||(38559919-38559963)
chr3 (110-186)||(53047773-53047849)
[»] scaffold0334 (1 HSPs)
scaffold0334 (141-187)||(5174-5220)
[»] scaffold1320 (1 HSPs)
scaffold1320 (111-174)||(1753-1815)
[»] scaffold0122 (2 HSPs)
scaffold0122 (141-184)||(31178-31221)
scaffold0122 (141-179)||(14209-14247)
[»] scaffold0025 (1 HSPs)
scaffold0025 (111-186)||(64211-64286)
[»] scaffold0007 (1 HSPs)
scaffold0007 (111-185)||(221006-221080)
[»] scaffold0066 (1 HSPs)
scaffold0066 (141-186)||(17497-17542)
[»] scaffold0005 (1 HSPs)
scaffold0005 (116-185)||(239801-239870)
[»] scaffold0188 (1 HSPs)
scaffold0188 (145-185)||(28140-28180)
[»] scaffold0180 (1 HSPs)
scaffold0180 (143-179)||(17732-17768)
[»] scaffold0098 (1 HSPs)
scaffold0098 (141-185)||(5419-5463)
[»] scaffold0021 (1 HSPs)
scaffold0021 (111-187)||(161133-161209)


Alignment Details
Target: chr8 (Bit Score: 147; Significance: 1e-77; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 16 - 239
Target Start/End: Original strand, 8599402 - 8599624
Alignment:
Q  16 gtttgaggaagtcttaccatttaacataaacttcaacttgtaaaaatttatttatgacgaaatttatatcaaactaatttcaactagnnnnnnnagtggt 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||   |||||||| |||||||||||||||||||||||||||||       ||||||    
T  8599402 gtttgaggaagtcttaccatttaacataaacttcaacttgtaaaaaaaaatttatgatgaaatttatatcaaactaatttcaactagtttttttagtggt 8599501  T
Q  116 cggggttcgaaccctggactttaagtatattatgcattgttcataacaactgagctaaactcacaaggacatttcaactaatttttgatacaacaagttt 215  Q
     ||| |||||||||||||| ||| |||||||||  ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  8599502 -gggattcgaaccctggaccttacgtatattatatattgtccataacaactgagctaaactcacaaggatatttcaactaatttttgatacaacaagttt 8599600  T
Q  216 atttacaaaaataattacattcat 239  Q
    ||||||||||||| ||||||||||    
T  8599601 atttacaaaaatatttacattcat 8599624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 111 - 179
Target Start/End: Original strand, 37749992 - 37750060
Alignment:
Q  111 gtggtcggggttcgaaccctggactttaagtatattatgcattgttcataacaactgagctaaactcac 179  Q
    |||| |||||||| ||||| |||||||   |||||||||||||||||||| ||||||||||||||||||    
T  37749992 gtggccggggttcaaaccccggactttgcatatattatgcattgttcatatcaactgagctaaactcac 37750060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 112 - 186
Target Start/End: Complemental strand, 14303232 - 14303158
Alignment:
Q  112 tggtcggggttcgaaccctggactttaagtatattatgcattgttcataacaactgagctaaactcacaaggaca 186  Q
    ||||||||||||||||| ||||| ||   |||||||| |||||| |||| |||||||||||||||||| ||||||    
T  14303232 tggtcggggttcgaaccttggaccttgtatatattatacattgtccataccaactgagctaaactcacgaggaca 14303158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 111 - 179
Target Start/End: Complemental strand, 41625262 - 41625194
Alignment:
Q  111 gtggtcggggttcgaaccctggactttaagtatattatgcattgttcataacaactgagctaaactcac 179  Q
    ||||| |||||||||||||| ||| |||  ||||||||||||| |||||| |||||||||||| |||||    
T  41625262 gtggttggggttcgaaccctagaccttacatatattatgcattattcataccaactgagctaagctcac 41625194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 186
Target Start/End: Original strand, 6235544 - 6235619
Alignment:
Q  111 gtggtcggggttcgaaccctggactttaagtatattatgcattgttcataacaactgagctaaactcacaaggaca 186  Q
    |||| ||||||| ||| || |||| |||  |||||||||||| || |||| |||||||||||||||||||||||||    
T  6235544 gtggccggggtttgaatcccggaccttacatatattatgcatcgtccataccaactgagctaaactcacaaggaca 6235619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 187
Target Start/End: Complemental strand, 574452 - 574376
Alignment:
Q  111 gtggtcggggttcgaaccctggactttaagtatattatgcattgttcataacaactgagctaaactcacaaggacat 187  Q
    |||||||  |||||||| | |||| |||  |||||||||||||||  ||| |||||||||||| |||||||||||||    
T  574452 gtggtcgaagttcgaactccggaccttacatatattatgcattgtctatatcaactgagctaagctcacaaggacat 574376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 185
Target Start/End: Original strand, 12910829 - 12910873
Alignment:
Q  141 tatattatgcattgttcataacaactgagctaaactcacaaggac 185  Q
    ||||||||||||||| |||| |||||||||||| |||||||||||    
T  12910829 tatattatgcattgtccataccaactgagctaatctcacaaggac 12910873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 111 - 186
Target Start/End: Complemental strand, 7997008 - 7996933
Alignment:
Q  111 gtggtcggggttcgaaccctggactttaagtatattatgcattgttcataacaactgagctaaactcacaaggaca 186  Q
    |||||||||||| ||||||  ||| ||   |||||||||| |||| |||| |||||||||||| ||||||||||||    
T  7997008 gtggtcggggtttgaaccccagaccttgcatatattatgcgttgtccataccaactgagctaagctcacaaggaca 7996933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 141 - 184
Target Start/End: Original strand, 8717498 - 8717541
Alignment:
Q  141 tatattatgcattgttcataacaactgagctaaactcacaagga 184  Q
    ||||||||||||||| |||| |||||||||||||||||| ||||    
T  8717498 tatattatgcattgtccataccaactgagctaaactcacgagga 8717541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 111 - 174
Target Start/End: Complemental strand, 15167117 - 15167055
Alignment:
Q  111 gtggtcggggttcgaaccctggactttaagtatattatgcattgttcataacaactgagctaaa 174  Q
    |||||||||||| |||||||  || ||| |||||||||||||||||| || |||||||||||||    
T  15167117 gtggtcggggtttgaacccta-accttatgtatattatgcattgttcctaccaactgagctaaa 15167055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 120 - 179
Target Start/End: Original strand, 26885640 - 26885699
Alignment:
Q  120 gttcgaaccctggactttaagtatattatgcattgttcataacaactgagctaaactcac 179  Q
    |||||||||| |||  |||  ||| |||||||||||||||| ||||||||||||||||||    
T  26885640 gttcgaaccccggatcttacatattttatgcattgttcataccaactgagctaaactcac 26885699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 111 - 186
Target Start/End: Original strand, 28436540 - 28436615
Alignment:
Q  111 gtggtcggggttcgaaccctggactttaagtatattatgcattgttcataacaactgagctaaactcacaaggaca 186  Q
    |||||||| ||| ||||  |||||||||  |||||||||||||||| ||| ||| |||||||| ||||| ||||||    
T  28436540 gtggtcggagtttgaactttggactttacatatattatgcattgttgatatcaattgagctaagctcactaggaca 28436615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 111 - 178
Target Start/End: Complemental strand, 29652286 - 29652219
Alignment:
Q  111 gtggtcggggttcgaaccctggactttaagtatattatgcattgttcataacaactgagctaaactca 178  Q
    ||||||| |||| |||| |||||| ||   ||||||||||||||||| || |||||||||||||||||    
T  29652286 gtggtcgaggtttgaactctggaccttgcatatattatgcattgttcttatcaactgagctaaactca 29652219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 185
Target Start/End: Original strand, 19163529 - 19163603
Alignment:
Q  111 gtggtcggggttcgaaccctggactttaagtatattatgcattgttcataacaactgagctaaactcacaaggac 185  Q
    |||||||||||| |||||| |||| ||   || |||||||||||| |||| |||||||||||| ||||| |||||    
T  19163529 gtggtcggggtttgaaccccggaccttgcataaattatgcattgtccataccaactgagctaagctcacgaggac 19163603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 185
Target Start/End: Original strand, 19260572 - 19260646
Alignment:
Q  111 gtggtcggggttcgaaccctggactttaagtatattatgcattgttcataacaactgagctaaactcacaaggac 185  Q
    |||| ||||||| |||||| |||| |||  ||||||||||||||| |||| ||||| ||||||||| || |||||    
T  19260572 gtggccggggtttgaaccccggaccttacatatattatgcattgtacatatcaactaagctaaacttacgaggac 19260646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 186
Target Start/End: Complemental strand, 37938562 - 37938488
Alignment:
Q  112 tggtcggggttcgaaccctggactttaagtatattatgcattgttcataacaactgagctaaactcacaaggaca 186  Q
    |||||||| || |||||  |||||||   ||||||||||||| | |||| |||||||||||||||||| ||||||    
T  37938562 tggtcgggatttgaacctcggactttgcatatattatgcattatccataccaactgagctaaactcacgaggaca 37938488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 114 - 179
Target Start/End: Original strand, 27134416 - 27134481
Alignment:
Q  114 gtcggggttcgaaccctggactttaagtatattatgcattgttcataacaactgagctaaactcac 179  Q
    ||||| ||| |||||| |||||||   |||||||| ||||||||||| |||||||| |||||||||    
T  27134416 gtcggagtttgaaccccggactttgcatatattatacattgttcataccaactgagttaaactcac 27134481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 186
Target Start/End: Complemental strand, 29499833 - 29499764
Alignment:
Q  117 ggggttcgaaccctggactttaagtatattatgcattgttcataacaactgagctaaactcacaaggaca 186  Q
    |||||||||||||||||| ||   ||| ||||||||||| |||| ||| |||||||| ||||| ||||||    
T  29499833 ggggttcgaaccctggaccttgcatattttatgcattgtccataccaattgagctaagctcacgaggaca 29499764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 141 - 186
Target Start/End: Complemental strand, 33445608 - 33445563
Alignment:
Q  141 tatattatgcattgttcataacaactgagctaaactcacaaggaca 186  Q
    ||||||||||||||||| || |||||||||||| ||||| ||||||    
T  33445608 tatattatgcattgttcctaccaactgagctaagctcacgaggaca 33445563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 118 - 179
Target Start/End: Complemental strand, 42367790 - 42367729
Alignment:
Q  118 gggttcgaaccctggactttaagtatattatgcattgttcataacaactgagctaaactcac 179  Q
    |||||||||| | |||||||   ||||||||||||||||| || |||||||||||| |||||    
T  42367790 gggttcgaactccggacttttcatatattatgcattgttcttatcaactgagctaagctcac 42367729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 145 - 186
Target Start/End: Original strand, 44215816 - 44215857
Alignment:
Q  145 ttatgcattgttcataacaactgagctaaactcacaaggaca 186  Q
    ||||||||||||| || |||||||||||||||||| ||||||    
T  44215816 ttatgcattgttcctatcaactgagctaaactcacgaggaca 44215857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 185
Target Start/End: Complemental strand, 6447227 - 6447183
Alignment:
Q  141 tatattatgcattgttcataacaactgagctaaactcacaaggac 185  Q
    ||||||||||||||| |||| |||||||| ||||||||| |||||    
T  6447227 tatattatgcattgtccataccaactgagttaaactcacgaggac 6447183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 186
Target Start/End: Original strand, 8999884 - 8999960
Alignment:
Q  111 gtggtcggggttcgaaccctggactttaagtatattatgca-ttgttcataacaactgagctaaactcacaaggaca 186  Q
    |||||||||||| ||||||||||||||   ||||||||||| ||||   || |||||||||||| ||||| ||||||    
T  8999884 gtggtcggggtttgaaccctggactttgcatatattatgcatttgtctctaccaactgagctaagctcacgaggaca 8999960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 167
Target Start/End: Original strand, 9192220 - 9192276
Alignment:
Q  111 gtggtcggggttcgaaccctggactttaagtatattatgcattgttcataacaactg 167  Q
    |||| ||||||| ||||||  |||||||  |||||||||||||||||||| ||||||    
T  9192220 gtggccggggtttgaaccccagactttacatatattatgcattgttcataccaactg 9192276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 185
Target Start/End: Original strand, 27718917 - 27718961
Alignment:
Q  141 tatattatgcattgttcataacaactgagctaaactcacaaggac 185  Q
    ||||||||||||||| |||| |||||||||||| ||||| |||||    
T  27718917 tatattatgcattgtccatatcaactgagctaagctcacgaggac 27718961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 185
Target Start/End: Complemental strand, 30218241 - 30218197
Alignment:
Q  141 tatattatgcattgttcataacaactgagctaaactcacaaggac 185  Q
    |||||||||||||||||||| |||||||  |||||||| ||||||    
T  30218241 tatattatgcattgttcatatcaactgaattaaactcagaaggac 30218197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 181
Target Start/End: Complemental strand, 30427769 - 30427729
Alignment:
Q  141 tatattatgcattgttcataacaactgagctaaactcacaa 181  Q
    ||||||||||||||| |||| |||||||||||| |||||||    
T  30427769 tatattatgcattgtccataccaactgagctaagctcacaa 30427729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 110 - 187
Target Start/End: Original strand, 346116 - 346193
Alignment:
Q  110 agtggtcggggttcgaaccctggactttaagtatattatgcattgttcataacaactgagctaaactcacaaggacat 187  Q
    ||||||||||||| ||||||||||| |||  ||||||||||||| |||| | |||||||||||| ||||| |||||||    
T  346116 agtggtcggggtttgaaccctggaccttacatatattatgcattattcaaaccaactgagctaagctcacgaggacat 346193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 112 - 185
Target Start/End: Complemental strand, 29734758 - 29734685
Alignment:
Q  112 tggtcggggttcgaaccctggactttaagtatattatgcattgttcataacaactgagctaaactcacaaggac 185  Q
    ||||||||||| |||||  |||| ||   ||||||||||||||| |||| ||||||||||||||||||||||||    
T  29734758 tggtcggggtttgaaccacggaccttgcatatattatgcattgtccatatcaactgagctaaactcacaaggac 29734685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 186
Target Start/End: Complemental strand, 4238827 - 4238752
Alignment:
Q  111 gtggtcggggttcgaaccctggactttaagtatattatgcattgttcataacaactgagctaaactcacaaggaca 186  Q
    |||||||| |||||||||| | || |||  ||||||||||||||| ||||  ||||||||||| ||||||||||||    
T  4238827 gtggtcggagttcgaaccccgaaccttacatatattatgcattgtccatactaactgagctaagctcacaaggaca 4238752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 182
Target Start/End: Original strand, 23250313 - 23250384
Alignment:
Q  111 gtggtcggggttcgaaccctggactttaagtatattatgcattgttcataacaactgagctaaactcacaag 182  Q
    |||||||||||| ||||||||||| ||   ||||||||||||||||| || |||||||| ||| ||||||||    
T  23250313 gtggtcggggtttgaaccctggaccttgcatatattatgcattgttcttaccaactgagttaagctcacaag 23250384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 186
Target Start/End: Original strand, 29133477 - 29133552
Alignment:
Q  111 gtggtcggggttcgaaccctggactttaagtatattatgcattgttcataacaactgagctaaactcacaaggaca 186  Q
    |||||||||||||||||||| ||  ||   ||| |||||||||||||||| ||||||||||||||| || ||||||    
T  29133477 gtggtcggggttcgaaccctagatcttgcatattttatgcattgttcataccaactgagctaaacttacgaggaca 29133552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 111 - 185
Target Start/End: Complemental strand, 6765678 - 6765604
Alignment:
Q  111 gtggtcggggttcgaaccctggactttaagtatattatgcattgttcataacaactgagctaaactcacaaggac 185  Q
    ||||||| ||||||||||| |||| |||  ||| ||||||||||| |||| |||||||||||| || ||||||||    
T  6765678 gtggtcgtggttcgaaccccggaccttacatattttatgcattgtccataccaactgagctaagcttacaaggac 6765604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 111 - 185
Target Start/End: Original strand, 29798510 - 29798584
Alignment:
Q  111 gtggtcggggttcgaaccctggactttaagtatattatgcattgttcataacaactgagctaaactcacaaggac 185  Q
    |||||||||||||||||||  ||| |||| ||| ||||||||||| |||| |||||||| ||| ||||| |||||    
T  29798510 gtggtcggggttcgaacccctgaccttaaatattttatgcattgtccataccaactgagttaagctcacgaggac 29798584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 141 - 186
Target Start/End: Original strand, 9517032 - 9517077
Alignment:
Q  141 tatattatgcattgttcataacaactgagctaaactcacaaggaca 186  Q
    |||||||||||||||||||| |||||||||||| ||||| ||||||    
T  9517032 tatattatgcattgttcataccaactgagctaatctcacgaggaca 9517077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 141 - 186
Target Start/End: Original strand, 37119281 - 37119326
Alignment:
Q  141 tatattatgcattgttcataacaactgagctaaactcacaaggaca 186  Q
    |||||||||||||||||||| |||||||| ||||||||||| ||||    
T  37119281 tatattatgcattgttcatatcaactgagttaaactcacaatgaca 37119326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 114 - 185
Target Start/End: Original strand, 6723073 - 6723144
Alignment:
Q  114 gtcggggttcgaaccctggactttaagtatattatgcattgttcataacaactgagctaaactcacaaggac 185  Q
    |||| |||||||||||||||| ||   |||||||| |||||| |||| |||||||| ||||||||| |||||    
T  6723073 gtcgaggttcgaaccctggaccttgcatatattatacattgtccatatcaactgagttaaactcacgaggac 6723144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 141 - 184
Target Start/End: Complemental strand, 20517060 - 20517017
Alignment:
Q  141 tatattatgcattgttcataacaactgagctaaactcacaagga 184  Q
    ||||||||||||||||| || |||||||||||||||||| ||||    
T  20517060 tatattatgcattgttcttaccaactgagctaaactcacgagga 20517017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 118 - 173
Target Start/End: Original strand, 25598562 - 25598617
Alignment:
Q  118 gggttcgaaccctggactttaagtatattatgcattgttcataacaactgagctaa 173  Q
    ||||||||||||||||| ||   ||||||||||||||| |||| ||||||||||||    
T  25598562 gggttcgaaccctggaccttgcatatattatgcattgtccataccaactgagctaa 25598617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 111 - 190
Target Start/End: Complemental strand, 44526196 - 44526117
Alignment:
Q  111 gtggtcggggttcgaaccctggactttaagtatattatgcattgttcataacaactgagctaaactcacaaggacatttc 190  Q
    |||| ||||||| ||| || |||| ||  |||||||||||||||| |||| |||||||||||| ||||| ||||| ||||    
T  44526196 gtggccggggtttgaatcccggaccttgcgtatattatgcattgtccataccaactgagctaagctcacgaggacttttc 44526117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 187
Target Start/End: Complemental strand, 17736827 - 17736785
Alignment:
Q  145 ttatgcattgttcataacaactgagctaaactcacaaggacat 187  Q
    |||||||||||||||| |||||||||||| ||||| |||||||    
T  17736827 ttatgcattgttcataccaactgagctaagctcacgaggacat 17736785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 184
Target Start/End: Complemental strand, 19967455 - 19967413
Alignment:
Q  142 atattatgcattgttcataacaactgagctaaactcacaagga 184  Q
    ||||||||||||||||||| |||||||||||| ||||| ||||    
T  19967455 atattatgcattgttcatatcaactgagctaagctcacgagga 19967413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 179
Target Start/End: Original strand, 25186265 - 25186303
Alignment:
Q  141 tatattatgcattgttcataacaactgagctaaactcac 179  Q
    ||||||||||||||| |||| ||||||||||||||||||    
T  25186265 tatattatgcattgtccatatcaactgagctaaactcac 25186303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 173
Target Start/End: Original strand, 25274826 - 25274884
Alignment:
Q  115 tcggggttcgaaccctggactttaagtatattatgcattgttcataacaactgagctaa 173  Q
    |||||||||||||||  ||| |||  ||||||||||||||||| || ||||||||||||    
T  25274826 tcggggttcgaaccccagaccttacatatattatgcattgttcttaccaactgagctaa 25274884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 179
Target Start/End: Original strand, 32957566 - 32957604
Alignment:
Q  141 tatattatgcattgttcataacaactgagctaaactcac 179  Q
    |||||||||||||||||||| |||| |||||||||||||    
T  32957566 tatattatgcattgttcataccaaccgagctaaactcac 32957604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 187
Target Start/End: Complemental strand, 33064024 - 33063978
Alignment:
Q  141 tatattatgcattgttcataacaactgagctaaactcacaaggacat 187  Q
    ||||||||||||||| |||| |||||||||||| ||||| |||||||    
T  33064024 tatattatgcattgtccatatcaactgagctaagctcacgaggacat 33063978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 179
Target Start/End: Original strand, 34464432 - 34464470
Alignment:
Q  141 tatattatgcattgttcataacaactgagctaaactcac 179  Q
    ||||||||||||||| |||| ||||||||||||||||||    
T  34464432 tatattatgcattgtccataccaactgagctaaactcac 34464470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 181
Target Start/End: Complemental strand, 44111018 - 44110948
Alignment:
Q  111 gtggtcggggttcgaaccctggactttaagtatattatgcattgttcataacaactgagctaaactcacaa 181  Q
    ||||| |||||| ||||||| |||||||  |||| |||||| ||||| || |||||||||||| |||||||    
T  44111018 gtggttggggtttgaaccctagactttacatatactatgcactgttcctaccaactgagctaagctcacaa 44110948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 141 - 186
Target Start/End: Original strand, 3197102 - 3197147
Alignment:
Q  141 tatattatgcattgttcataacaactgagctaaactcacaaggaca 186  Q
    ||||||||||||||| | || |||||||||||||||||| ||||||    
T  3197102 tatattatgcattgtccctaccaactgagctaaactcacgaggaca 3197147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 145 - 186
Target Start/End: Original strand, 3752802 - 3752843
Alignment:
Q  145 ttatgcattgttcataacaactgagctaaactcacaaggaca 186  Q
    ||||||||||||||||||||| ||||||| ||||| ||||||    
T  3752802 ttatgcattgttcataacaaccgagctaagctcacgaggaca 3752843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 145 - 178
Target Start/End: Original strand, 16221373 - 16221406
Alignment:
Q  145 ttatgcattgttcataacaactgagctaaactca 178  Q
    |||||||||||||||| |||||||||||||||||    
T  16221373 ttatgcattgttcataccaactgagctaaactca 16221406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 179
Target Start/End: Complemental strand, 19976222 - 19976153
Alignment:
Q  111 gtggtcggggttcgaaccctggactttaagtat-attatgcattgttcataacaactgagctaaactcac 179  Q
    ||||||| ||||||||||| |||| ||   ||| |||||||||||| |||| ||||||||||||||||||    
T  19976222 gtggtcgaggttcgaaccccggaccttgcatattattatgcattgtccataccaactgagctaaactcac 19976153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 116 - 185
Target Start/End: Original strand, 41187455 - 41187524
Alignment:
Q  116 cggggttcgaaccctggactttaagtatattatgcattgttcataacaactgagctaaactcacaaggac 185  Q
    |||||||||||||| |||||||   ||| ||||||||||| |||| ||||| |||||| ||||| |||||    
T  41187455 cggggttcgaaccccggactttgcatattttatgcattgtccataccaactaagctaagctcacgaggac 41187524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 185
Target Start/End: Complemental strand, 7201545 - 7201501
Alignment:
Q  141 tatattatgcattgttcataacaactgagctaaactcacaaggac 185  Q
    |||||||||||||||||| | |||||||||||| ||||| |||||    
T  7201545 tatattatgcattgttcaaaccaactgagctaagctcacgaggac 7201501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 185
Target Start/End: Original strand, 9383232 - 9383276
Alignment:
Q  141 tatattatgcattgttcataacaactgagctaaactcacaaggac 185  Q
    ||||||||||||||| |||| |||||||||||| ||||| |||||    
T  9383232 tatattatgcattgtccataccaactgagctaagctcacgaggac 9383276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 179
Target Start/End: Complemental strand, 12124605 - 12124545
Alignment:
Q  119 ggttcgaaccctggactttaagtatattatgcattgttcataacaactgagctaaactcac 179  Q
    ||||||||||| |||| ||   ||||||||||||||| | || ||||||||||||||||||    
T  12124605 ggttcgaaccccggaccttgcatatattatgcattgtccttaccaactgagctaaactcac 12124545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 189
Target Start/End: Complemental strand, 16877162 - 16877114
Alignment:
Q  141 tatattatgcattgttcataacaactgagctaaactcacaaggacattt 189  Q
    ||||||||||||||| |||| || ||||||||| ||||| |||||||||    
T  16877162 tatattatgcattgtccataccagctgagctaagctcacgaggacattt 16877114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 189
Target Start/End: Complemental strand, 16989293 - 16989245
Alignment:
Q  141 tatattatgcattgttcataacaactgagctaaactcacaaggacattt 189  Q
    ||||||||||||||| |||| || ||||||||| ||||| |||||||||    
T  16989293 tatattatgcattgtccataccagctgagctaagctcacgaggacattt 16989245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 187
Target Start/End: Original strand, 33117430 - 33117474
Alignment:
Q  143 tattatgcattgttcataacaactgagctaaactcacaaggacat 187  Q
    ||||||||||| ||||||  ||||||||||| |||||||||||||    
T  33117430 tattatgcattattcatactaactgagctaagctcacaaggacat 33117474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 173
Target Start/End: Complemental strand, 41668693 - 41668661
Alignment:
Q  141 tatattatgcattgttcataacaactgagctaa 173  Q
    |||||||||||||||||||| ||||||||||||    
T  41668693 tatattatgcattgttcataccaactgagctaa 41668661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 111 - 179
Target Start/End: Complemental strand, 8227417 - 8227349
Alignment:
Q  111 gtggtcggggttcgaaccctggactttaagtatattatgcattgttcataacaactgagctaaactcac 179  Q
    ||||||| | ||||||||||||||||||  ||||||||||||||| | || ||||||||||||||||||    
T  8227417 gtggtcgagattcgaaccctggactttacatatattatgcattgtccttatcaactgagctaaactcac 8227349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 111 - 192
Target Start/End: Complemental strand, 19599213 - 19599132
Alignment:
Q  111 gtggtcggggttcgaaccctggactttaagtatattatgcattgttcataacaactgagctaaactcacaaggacatttcaa 192  Q
    |||||||||||| |||||| |||| ||   ||||||||||||||| |||| |||||||| ||||||||| ||||||| ||||    
T  19599213 gtggtcggggtttgaaccccggaccttgcatatattatgcattgtccataccaactgagttaaactcaccaggacatatcaa 19599132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 112 - 185
Target Start/End: Original strand, 23198743 - 23198816
Alignment:
Q  112 tggtcggggttcgaaccctggactttaagtatattatgcattgttcataacaactgagctaaactcacaaggac 185  Q
    ||||||||||| |||||| |||||||   ||| |||||||||||||||| |||||||| ||||||||| |||||    
T  23198743 tggtcggggtttgaaccccggactttgcatattttatgcattgttcataccaactgagttaaactcacgaggac 23198816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 118 - 186
Target Start/End: Original strand, 43539104 - 43539172
Alignment:
Q  118 gggttcgaaccctggactttaagtatattatgcattgttcataacaactgagctaaactcacaaggaca 186  Q
    ||||| |||||| |||| |||  ||||||||||||||||| || |||||||||||| ||||||||||||    
T  43539104 gggtttgaaccccggaccttacatatattatgcattgttcctatcaactgagctaagctcacaaggaca 43539172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 125 - 188
Target Start/End: Complemental strand, 20205876 - 20205813
Alignment:
Q  125 aaccctggactttaagtatattatgcattgttcataacaactgagctaaactcacaaggacatt 188  Q
    ||||| ||||||||  ||||||||||||||| |||| ||||||||||||||| || ||||||||    
T  20205876 aaccccggactttacatatattatgcattgtccataccaactgagctaaacttacgaggacatt 20205813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 110 - 189
Target Start/End: Original strand, 34448602 - 34448681
Alignment:
Q  110 agtggtcggggttcgaaccctggactttaagtatattatgcattgttcataacaactgagctaaactcacaaggacattt 189  Q
    ||||||| ||||| ||||||||||| |||  ||||||||||||||| || | |||||||| ||| ||||| |||||||||    
T  34448602 agtggtcagggtttgaaccctggaccttacatatattatgcattgtccaaaccaactgagttaagctcacgaggacattt 34448681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 141 - 186
Target Start/End: Original strand, 3672575 - 3672620
Alignment:
Q  141 tatattatgcattgttcataacaactgagctaaactcacaaggaca 186  Q
    ||||||||| ||||| |||| |||||||||||||||||||||||||    
T  3672575 tatattatgtattgtccatatcaactgagctaaactcacaaggaca 3672620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 187
Target Start/End: Original strand, 42043079 - 42043135
Alignment:
Q  131 ggactttaagtatattatgcattgttcataacaactgagctaaactcacaaggacat 187  Q
    |||| |||| ||||||||||||||| |||| |||||||||||| ||||||| |||||    
T  42043079 ggaccttaaatatattatgcattgtccataccaactgagctaagctcacaaagacat 42043135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 188
Target Start/End: Complemental strand, 45051732 - 45051688
Alignment:
Q  144 attatgcattgttcataacaactgagctaaactcacaaggacatt 188  Q
    ||||||||||||||||| |||||||||||| |||| |||||||||    
T  45051732 attatgcattgttcataccaactgagctaagctcagaaggacatt 45051688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 111 - 186
Target Start/End: Original strand, 35142142 - 35142217
Alignment:
Q  111 gtggtcggggttcgaaccctggactttaagtatattatgcattgttcataacaactgagctaaactcacaaggaca 186  Q
    ||||||||||||||||||    |||||   ||||||||||||||| |||| |||||||||||| ||||| ||||||    
T  35142142 gtggtcggggttcgaacctcaaactttgcatatattatgcattgtccatatcaactgagctaagctcacgaggaca 35142217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 187
Target Start/End: Complemental strand, 30857286 - 30857240
Alignment:
Q  141 tatattatgcattgttcataacaactgagctaaactcacaaggacat 187  Q
    ||||||||||||||| |||| ||||| |||||||||||| |||||||    
T  30857286 tatattatgcattgtccataccaactaagctaaactcacgaggacat 30857240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 179
Target Start/End: Original strand, 31885968 - 31886006
Alignment:
Q  141 tatattatgcattgttcataacaactgagctaaactcac 179  Q
    |||||||||||||||||||| ||||||| ||||||||||    
T  31885968 tatattatgcattgttcataccaactgaactaaactcac 31886006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 189
Target Start/End: Original strand, 40752832 - 40752910
Alignment:
Q  111 gtggtcggggttcgaaccctggactttaagtatattatgcattgttcataacaactgagctaaactcacaaggacattt 189  Q
    |||| |||||||||||||| |||| ||   ||||||||| ||||| ||||  ||||||||||| ||||| |||||||||    
T  40752832 gtggccggggttcgaaccccggacattgcatatattatgtattgtccatactaactgagctaagctcacgaggacattt 40752910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 179
Target Start/End: Original strand, 44558797 - 44558835
Alignment:
Q  141 tatattatgcattgttcataacaactgagctaaactcac 179  Q
    ||||||||||||||| |||| ||||||||||||||||||    
T  44558797 tatattatgcattgtccataccaactgagctaaactcac 44558835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 110 - 179
Target Start/End: Complemental strand, 7670503 - 7670434
Alignment:
Q  110 agtggtcggggttcgaaccctggactttaagtatattatgcattgttcataacaactgagctaaactcac 179  Q
    |||||||| |||| |||||| |||| ||   |||||||||||||||||| | |||||||||||| |||||    
T  7670503 agtggtcgaggtttgaaccccggaccttgcatatattatgcattgttcaaaccaactgagctaagctcac 7670434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 141 - 182
Target Start/End: Original strand, 10555366 - 10555407
Alignment:
Q  141 tatattatgcattgttcataacaactgagctaaactcacaag 182  Q
    |||||||| ||||||||||| ||||||||||||||| |||||    
T  10555366 tatattatacattgttcataccaactgagctaaacttacaag 10555407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 141 - 186
Target Start/End: Original strand, 21099796 - 21099841
Alignment:
Q  141 tatattatgcattgttcataacaactgagctaaactcacaaggaca 186  Q
    ||||||||||||||| |||| ||||||||||||| |||| ||||||    
T  21099796 tatattatgcattgtccataccaactgagctaaattcacgaggaca 21099841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 172
Target Start/End: Original strand, 27833394 - 27833455
Alignment:
Q  111 gtggtcggggttcgaaccctggactttaagtatattatgcattgttcataacaactgagcta 172  Q
    |||||||||||| |||||| |||| |||  ||||||||||||||| | || |||||||||||    
T  27833394 gtggtcggggtttgaaccccggaccttacatatattatgcattgtccttaccaactgagcta 27833455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 172
Target Start/End: Original strand, 29237558 - 29237611
Alignment:
Q  119 ggttcgaaccctggactttaagtatattatgcattgttcataacaactgagcta 172  Q
    |||||||||||||||| ||   ||||||||||||||||| || |||||||||||    
T  29237558 ggttcgaaccctggaccttgcatatattatgcattgttcttaccaactgagcta 29237611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 145 - 186
Target Start/End: Original strand, 47589580 - 47589621
Alignment:
Q  145 ttatgcattgttcataacaactgagctaaactcacaaggaca 186  Q
    |||||||||||||||| |||||||||||| ||||| ||||||    
T  47589580 ttatgcattgttcataccaactgagctaagctcacgaggaca 47589621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 141 - 186
Target Start/End: Complemental strand, 48980525 - 48980480
Alignment:
Q  141 tatattatgcattgttcataacaactgagctaaactcacaaggaca 186  Q
    ||||||||||||||| |||| |||||||||||| ||||| ||||||    
T  48980525 tatattatgcattgtccataccaactgagctaagctcacgaggaca 48980480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 185
Target Start/End: Complemental strand, 5526763 - 5526719
Alignment:
Q  141 tatattatgcattgttcataacaactgagctaaactcacaaggac 185  Q
    ||||||||||||||| |||| |||||||||||| ||||| |||||    
T  5526763 tatattatgcattgtccataccaactgagctaagctcacgaggac 5526719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 176
Target Start/End: Complemental strand, 7908660 - 7908596
Alignment:
Q  112 tggtcggggttcgaaccctggactttaagtatattatgcattgttcataacaactgagctaaact 176  Q
    |||||||||||||||||| | || |||  ||| ||||||||||| |||| ||||||| |||||||    
T  7908660 tggtcggggttcgaaccccgaaccttacatattttatgcattgtccataccaactgaactaaact 7908596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 173
Target Start/End: Complemental strand, 9522950 - 9522918
Alignment:
Q  141 tatattatgcattgttcataacaactgagctaa 173  Q
    |||||||||||||||||||| ||||||||||||    
T  9522950 tatattatgcattgttcataccaactgagctaa 9522918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 185
Target Start/End: Complemental strand, 10244765 - 10244721
Alignment:
Q  141 tatattatgcattgttcataacaactgagctaaactcacaaggac 185  Q
    ||||||||||||||| |||| |||||||||||| ||||| |||||    
T  10244765 tatattatgcattgtccataccaactgagctaagctcacgaggac 10244721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 177
Target Start/End: Original strand, 37307897 - 37307933
Alignment:
Q  141 tatattatgcattgttcataacaactgagctaaactc 177  Q
    ||||||||||||||||| || ||||||||||||||||    
T  37307897 tatattatgcattgttcctatcaactgagctaaactc 37307933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 185
Target Start/End: Complemental strand, 39801744 - 39801700
Alignment:
Q  141 tatattatgcattgttcataacaactgagctaaactcacaaggac 185  Q
    ||||||||||||||| |||| |||||||||||| ||||| |||||    
T  39801744 tatattatgcattgtccataccaactgagctaagctcacgaggac 39801700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 185
Target Start/End: Complemental strand, 46207794 - 46207754
Alignment:
Q  145 ttatgcattgttcataacaactgagctaaactcacaaggac 185  Q
    |||||||||||||||| |||||||||||| ||||| |||||    
T  46207794 ttatgcattgttcataccaactgagctaagctcacgaggac 46207754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 111 - 187
Target Start/End: Original strand, 24623310 - 24623386
Alignment:
Q  111 gtggtcggggttcgaaccctggactttaagtatattatgcattgttcataacaactgagctaaactcacaaggacat 187  Q
    |||||||||||| |||||| | || |||  ||||||||||||||| |||| |||||||||||||||||||| |||||    
T  24623310 gtggtcggggtttgaaccccgaaccttacatatattatgcattgtccatatcaactgagctaaactcacaaagacat 24623386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 110 - 187
Target Start/End: Original strand, 655741 - 655818
Alignment:
Q  110 agtggtcggggttcgaaccctggactttaagtatattatgcattgttcataacaactgagctaaactcacaaggacat 187  Q
    ||||| |||||||||||||| |||| ||   |||||||||||||||  ||| |||||||||||| |||||||||||||    
T  655741 agtggccggggttcgaaccccggaccttgcatatattatgcattgtcgataccaactgagctaagctcacaaggacat 655818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 115 - 186
Target Start/End: Complemental strand, 9111111 - 9111040
Alignment:
Q  115 tcggggttcgaaccctggactttaagtatattatgcattgttcataacaactgagctaaactcacaaggaca 186  Q
    ||||||||||||||| |||| ||   |||||||||||||||||||| ||||||| |||| ||||| ||||||    
T  9111111 tcggggttcgaaccccggaccttgcatatattatgcattgttcataccaactgaactaagctcacgaggaca 9111040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 186
Target Start/End: Original strand, 12700414 - 12700489
Alignment:
Q  111 gtggtcggggttcgaaccctggactttaagtatattatgcattgttcataacaactgagctaaactcacaaggaca 186  Q
    |||| |||||||| |||||| ||| ||   |||||||||||||||||||| ||||||| |||| ||||||||||||    
T  12700414 gtggccggggttcaaaccctagaccttgcatatattatgcattgttcataccaactgaactaagctcacaaggaca 12700489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 111 - 173
Target Start/End: Complemental strand, 24827120 - 24827058
Alignment:
Q  111 gtggtcggggttcgaaccctggactttaagtatattatgcattgttcataacaactgagctaa 173  Q
    ||||||||||||||||||||| || |||  ||| ||||||||||| |||| ||||||||||||    
T  24827120 gtggtcggggttcgaaccctgaaccttatatattttatgcattgtccatatcaactgagctaa 24827058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 185
Target Start/End: Original strand, 9392691 - 9392735
Alignment:
Q  141 tatattatgcattgttcataacaactgagctaaactcacaaggac 185  Q
    ||||||||||||| ||||||||||||||||||| ||||| |||||    
T  9392691 tatattatgcatttttcataacaactgagctaagctcacgaggac 9392735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 187
Target Start/End: Complemental strand, 9445025 - 9444949
Alignment:
Q  111 gtggtcggggttcgaaccctggactttaagtatattatgcattgttcataacaactgagctaaactcacaaggacat 187  Q
    ||||||||| ||||||||||| || ||   ||| |||| ||||||||||| |||||||||||| ||||| |||||||    
T  9445025 gtggtcgggattcgaaccctgaaccttgcatattttatacattgttcataccaactgagctaagctcacgaggacat 9444949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 111 - 186
Target Start/End: Complemental strand, 29740550 - 29740475
Alignment:
Q  111 gtggtcggggttcgaaccctggactttaagtatattatgcattgttcataacaactgagctaaactcacaaggaca 186  Q
    |||| ||||||| |||||| |||| ||  |||||||||||||||| |||| ||| |||||||| ||||| ||||||    
T  29740550 gtggccggggtttgaaccccggaccttgcgtatattatgcattgtccataccaattgagctaagctcacgaggaca 29740475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 141 - 188
Target Start/End: Complemental strand, 32053826 - 32053779
Alignment:
Q  141 tatattatgcattgttcataacaactgagctaaactcacaaggacatt 188  Q
    ||||||||||||||| |||| |||||||||||| ||||| ||||||||    
T  32053826 tatattatgcattgtccataccaactgagctaagctcacgaggacatt 32053779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 178
Target Start/End: Complemental strand, 33975993 - 33975930
Alignment:
Q  116 cggggttcgaaccctggactttaagtatatt-atgcattgttcataacaactgagctaaactca 178  Q
    |||||||||||||| |||||| |  |||||| ||||||||||| || |||||||||||||||||    
T  33975993 cggggttcgaaccccggacttgacatatatttatgcattgttcctatcaactgagctaaactca 33975930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 186
Target Start/End: Complemental strand, 34828342 - 34828299
Alignment:
Q  143 tattatgcattgttcataacaactgagctaaactcacaaggaca 186  Q
    ||||||||||||| |||| |||||||||||||||||| ||||||    
T  34828342 tattatgcattgtccataccaactgagctaaactcacgaggaca 34828299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 187
Target Start/End: Complemental strand, 9923278 - 9923232
Alignment:
Q  141 tatattatgcattgttcataacaactgagctaaactcacaaggacat 187  Q
    ||||||||||||||| | || ||| ||||||||||||||||||||||    
T  9923278 tatattatgcattgtccttatcaattgagctaaactcacaaggacat 9923232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 189
Target Start/End: Original strand, 14296950 - 14297028
Alignment:
Q  111 gtggtcggggttcgaaccctggactttaagtatattatgcattgttcataacaactgagctaaactcacaaggacattt 189  Q
    |||| ||||||| |||||| |||| |||  ||| ||||| ||||| |||| ||||| |||||| |||||||||||||||    
T  14296950 gtggccggggtttgaaccccggaccttacatattttatgtattgtccataccaactcagctaagctcacaaggacattt 14297028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 179
Target Start/End: Original strand, 20720804 - 20720842
Alignment:
Q  141 tatattatgcattgttcataacaactgagctaaactcac 179  Q
    ||||||||||||||| ||||||||||||||||| |||||    
T  20720804 tatattatgcattgtccataacaactgagctaagctcac 20720842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 179
Target Start/End: Original strand, 32193882 - 32193920
Alignment:
Q  141 tatattatgcattgttcataacaactgagctaaactcac 179  Q
    ||||||||||||||||| || ||||||||||||||||||    
T  32193882 tatattatgcattgttcttaccaactgagctaaactcac 32193920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 179
Target Start/End: Original strand, 33938702 - 33938740
Alignment:
Q  141 tatattatgcattgttcataacaactgagctaaactcac 179  Q
    |||||||||||||||||||| |||||||||||| |||||    
T  33938702 tatattatgcattgttcataccaactgagctaagctcac 33938740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 141 - 186
Target Start/End: Original strand, 8138481 - 8138526
Alignment:
Q  141 tatattatgcattgttcataacaactgagctaaactcacaaggaca 186  Q
    ||||||||||||||||| || ||||||||||||| |||| ||||||    
T  8138481 tatattatgcattgttcttatcaactgagctaaattcacgaggaca 8138526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 112 - 185
Target Start/End: Complemental strand, 13496183 - 13496110
Alignment:
Q  112 tggtcggggttcgaaccctggactttaagtatattatgcattgttcataacaactgagctaaactcacaaggac 185  Q
    ||||||||||| |||| | |||| ||   |||||||||||||||||||| |||||||| ||| ||||| |||||    
T  13496183 tggtcggggtttgaactccggaccttgcatatattatgcattgttcatatcaactgagttaagctcacgaggac 13496110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 180
Target Start/End: Complemental strand, 15169999 - 15169930
Alignment:
Q  111 gtggtcggggttcgaaccctggactttaagtatattatgcattgttcataacaactgagctaaactcaca 180  Q
    |||||||||||| |||||| | || |||  ||||||||||||||| | || || ||||||||||||||||    
T  15169999 gtggtcggggtttgaaccccgaaccttacatatattatgcattgtacttaccagctgagctaaactcaca 15169930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 180
Target Start/End: Complemental strand, 15178771 - 15178702
Alignment:
Q  111 gtggtcggggttcgaaccctggactttaagtatattatgcattgttcataacaactgagctaaactcaca 180  Q
    |||||||||||| |||||| | || |||  ||||||||||||||| | || || ||||||||||||||||    
T  15178771 gtggtcggggtttgaaccccgaaccttacatatattatgcattgtacttaccagctgagctaaactcaca 15178702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 184
Target Start/End: Complemental strand, 20744206 - 20744133
Alignment:
Q  111 gtggtcggggttcgaaccctggactttaagtatattatgcattgttcataacaactgagctaaactcacaagga 184  Q
    |||||||||||| ||||||  ||| ||   ||||||||||||||| |||| |||||||||||| ||||| ||||    
T  20744206 gtggtcggggtttgaaccccagaccttgcatatattatgcattgtccataccaactgagctaagctcacgagga 20744133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 184
Target Start/End: Original strand, 31682929 - 31682970
Alignment:
Q  143 tattatgcattgttcataacaactgagctaaactcacaagga 184  Q
    ||||||||||||||| || |||| ||||||||||||||||||    
T  31682929 tattatgcattgttcttaccaacggagctaaactcacaagga 31682970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 185
Target Start/End: Original strand, 21936056 - 21936100
Alignment:
Q  141 tatattatgcattgttcataacaactgagctaaactcacaaggac 185  Q
    ||||||||| ||||||| || ||||||||||||||||||| ||||    
T  21936056 tatattatgaattgttcttaccaactgagctaaactcacatggac 21936100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 111 - 186
Target Start/End: Original strand, 19479470 - 19479545
Alignment:
Q  111 gtggtcggggttcgaaccctggactttaagtatattatgcattgttcataacaactgagctaaactcacaaggaca 186  Q
    |||||||||||| |||||| |||| ||   ||||||||||||||||||||  ||||||||||| ||||||||||||    
T  19479470 gtggtcggggtttgaaccccggaccttgcatatattatgcattgttcatattaactgagctaagctcacaaggaca 19479545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 111 - 185
Target Start/End: Complemental strand, 3936695 - 3936621
Alignment:
Q  111 gtggtcggggttcgaaccctggactttaagtatattatgcattgttcataacaactgagctaaactcacaaggac 185  Q
    |||| |||||||||||||| |||| ||   |||||||||||||||||||| |||||||||||| |||||| ||||    
T  3936695 gtggccggggttcgaaccccggaccttgcatatattatgcattgttcataccaactgagctaagctcacagggac 3936621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 141 - 187
Target Start/End: Original strand, 28435271 - 28435317
Alignment:
Q  141 tatattatgcattgttcataacaactgagctaaactcacaaggacat 187  Q
    ||||||||||||||| |||| ||||||||||||||||||||||||||    
T  28435271 tatattatgcattgtccataccaactgagctaaactcacaaggacat 28435317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 186
Target Start/End: Original strand, 22164262 - 22164337
Alignment:
Q  111 gtggtcggggttcgaaccctggactttaagtatattatgcattgttcataacaactgagctaaactcacaaggaca 186  Q
    |||||||||||| ||||||  ||| |||  ||||||||||||||||| || ||||| |||||||||||| ||||||    
T  22164262 gtggtcggggtttgaaccccagaccttacatatattatgcattgttcctaccaactaagctaaactcacgaggaca 22164337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 186
Target Start/End: Original strand, 24664984 - 24665059
Alignment:
Q  111 gtggtcggggttcgaaccctggactttaagtatattatgcattgttcataacaactgagctaaactcacaaggaca 186  Q
    ||||||||||||||||||| |||| ||   ||||||||||||| | |||| |||||||||||| ||||| ||||||    
T  24664984 gtggtcggggttcgaaccccggaccttgcatatattatgcattctccataccaactgagctaagctcacgaggaca 24665059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 111 - 189
Target Start/End: Original strand, 18915039 - 18915117
Alignment:
Q  111 gtggtcggggttcgaaccctggactttaagtatattatgcattgttcataacaactgagctaaactcacaaggacattt 189  Q
    ||||||||| ||||||||| ||||  | | ||||||||||||||| | || ||||||||||||||||||  ||||||||    
T  18915039 gtggtcgggattcgaaccccggaccatgaatatattatgcattgtccttaccaactgagctaaactcacggggacattt 18915117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 143 - 185
Target Start/End: Complemental strand, 35998035 - 35997993
Alignment:
Q  143 tattatgcattgttcataacaactgagctaaactcacaaggac 185  Q
    ||||||||||||| |||| ||||||||||||||||||||||||    
T  35998035 tattatgcattgtccatatcaactgagctaaactcacaaggac 35997993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 141 - 186
Target Start/End: Complemental strand, 34247478 - 34247433
Alignment:
Q  141 tatattatgcattgttcataacaactgagctaaactcacaaggaca 186  Q
    ||||||||||||||| | || |||||||||||||||||||||||||    
T  34247478 tatattatgcattgtccttaccaactgagctaaactcacaaggaca 34247433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 117 - 186
Target Start/End: Complemental strand, 38453327 - 38453258
Alignment:
Q  117 ggggttcgaaccctggactttaagtatattatgcattgttcataacaactgagctaaactcacaaggaca 186  Q
    |||||||||||||||||| ||   ||||||||||||||| |||  |||||||||||| ||||| ||||||    
T  38453327 ggggttcgaaccctggaccttgcatatattatgcattgtccatgccaactgagctaagctcacgaggaca 38453258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 118 - 187
Target Start/End: Complemental strand, 43722826 - 43722757
Alignment:
Q  118 gggttcgaaccctggactttaagtatattatgcattgttcataacaactgagctaaactcacaaggacat 187  Q
    ||||| |||||| |||| |||  ||||||||||||||| |||| |||||||| ||||||||| |||||||    
T  43722826 gggtttgaaccccggaccttacatatattatgcattgtccataccaactgagttaaactcacgaggacat 43722757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 185
Target Start/End: Complemental strand, 22040688 - 22040644
Alignment:
Q  141 tatattatgcattgttcataacaactgagctaaactcacaaggac 185  Q
    ||||||||||||||| |||| |||||||||||||||| |||||||    
T  22040688 tatattatgcattgtccatatcaactgagctaaactcgcaaggac 22040644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 173
Target Start/End: Complemental strand, 36059078 - 36059034
Alignment:
Q  129 ctggactttaagtatattatgcattgttcataacaactgagctaa 173  Q
    |||||||||| |||| |||||||||||||||| ||||||||||||    
T  36059078 ctggactttatgtattttatgcattgttcataccaactgagctaa 36059034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 187
Target Start/End: Complemental strand, 49021834 - 49021758
Alignment:
Q  111 gtggtcggggttcgaaccctggactttaagtatattatgcattgttcataacaactgagctaaactcacaaggacat 187  Q
    |||||||||||||||| ||| ||| ||   ||| ||||| ||||| |||| |||||| |||||||||||||||||||    
T  49021834 gtggtcggggttcgaatcctagaccttgcatattttatgtattgtccataccaactgcgctaaactcacaaggacat 49021758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 185
Target Start/End: Original strand, 56298147 - 56298191
Alignment:
Q  141 tatattatgcattgttcataacaactgagctaaactcacaaggac 185  Q
    |||||||||||||||||||||||| |||| |||||||||| ||||    
T  56298147 tatattatgcattgttcataacaattgagttaaactcacatggac 56298191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 111 - 178
Target Start/End: Original strand, 11949756 - 11949823
Alignment:
Q  111 gtggtcggggttcgaaccctggactttaagtatattatgcattgttcataacaactgagctaaactca 178  Q
    |||||||||||| |||||| |||| ||   ||||||||||||||| |||| |||||||||||| ||||    
T  11949756 gtggtcggggtttgaaccccggaccttgcatatattatgcattgtccataccaactgagctaagctca 11949823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 111 - 186
Target Start/End: Complemental strand, 16470372 - 16470297
Alignment:
Q  111 gtggtcggggttcgaaccctggactttaagtatattatgcattgttcataacaactgagctaaactcacaaggaca 186  Q
    |||||||||||||||||||||||| ||   ||| ||||||||||| |||| ||| |||||||  ||||| ||||||    
T  16470372 gtggtcggggttcgaaccctggaccttgcatattttatgcattgtccataccaattgagctacgctcacgaggaca 16470297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 141 - 184
Target Start/End: Complemental strand, 19854603 - 19854560
Alignment:
Q  141 tatattatgcattgttcataacaactgagctaaactcacaagga 184  Q
    ||||||||||||||| |||| |||||||||||| ||||||||||    
T  19854603 tatattatgcattgtccataccaactgagctaagctcacaagga 19854560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 141 - 188
Target Start/End: Original strand, 52270053 - 52270100
Alignment:
Q  141 tatattatgcattgttcataacaactgagctaaactcacaaggacatt 188  Q
    ||||||||||||||| |||| |||||||||||| ||||| ||||||||    
T  52270053 tatattatgcattgtccataccaactgagctaagctcacgaggacatt 52270100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 187
Target Start/End: Original strand, 2186356 - 2186402
Alignment:
Q  141 tatattatgcattgttcataacaactgagctaaactcacaaggacat 187  Q
    ||||||||||||||| |||| |||||||||||| ||||| |||||||    
T  2186356 tatattatgcattgtccataccaactgagctaagctcacgaggacat 2186402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 185
Target Start/End: Complemental strand, 9946495 - 9946421
Alignment:
Q  111 gtggtcggggttcgaaccctggactttaagtatattatgcattgttcataacaactgagctaaactcacaaggac 185  Q
    |||||||||||| |||||| |||| ||   ||| ||||||||||| |||| |||||||||||| ||||| |||||    
T  9946495 gtggtcggggtttgaaccccggaccttgcatattttatgcattgtccataccaactgagctaagctcacgaggac 9946421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 187
Target Start/End: Complemental strand, 15175179 - 15175133
Alignment:
Q  141 tatattatgcattgttcataacaactgagctaaactcacaaggacat 187  Q
    |||||||| |||| ||| || ||||||||||||||||||||||||||    
T  15175179 tatattatacattattcttatcaactgagctaaactcacaaggacat 15175133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 187
Target Start/End: Original strand, 16743307 - 16743353
Alignment:
Q  141 tatattatgcattgttcataacaactgagctaaactcacaaggacat 187  Q
    ||||||||||||| | |||| |||||||||||| |||||||||||||    
T  16743307 tatattatgcattatccatatcaactgagctaagctcacaaggacat 16743353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 186
Target Start/End: Original strand, 19935187 - 19935229
Alignment:
Q  144 attatgcattgttcataacaactgagctaaactcacaaggaca 186  Q
    |||||||||||||| || |||||||||||||||||| ||||||    
T  19935187 attatgcattgttcttatcaactgagctaaactcacgaggaca 19935229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 185
Target Start/End: Complemental strand, 32180898 - 32180824
Alignment:
Q  111 gtggtcggggttcgaaccctggactttaagtatattatgcattgttcataacaactgagctaaactcacaaggac 185  Q
    |||||||||||||||||||  ||||||   ||| |||||||||||  ||| |||||||||||| ||||| |||||    
T  32180898 gtggtcggggttcgaaccccagactttgcatattttatgcattgtctataccaactgagctaagctcacgaggac 32180824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 185
Target Start/End: Original strand, 35287500 - 35287574
Alignment:
Q  111 gtggtcggggttcgaaccctggactttaagtatattatgcattgttcataacaactgagctaaactcacaaggac 185  Q
    |||| ||||||| |||||| |||| ||   ||| |||||||||||||||| |||||||||||| ||||| |||||    
T  35287500 gtggccggggttggaaccccggaccttgcatattttatgcattgttcataccaactgagctaagctcacgaggac 35287574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 178
Target Start/End: Complemental strand, 897487 - 897426
Alignment:
Q  117 ggggttcgaaccctggactttaagtatattatgcattgttcataacaactgagctaaactca 178  Q
    |||||| |||||| |||| |||  |||||||| |||||| |||| |||||||||||||||||    
T  897487 ggggtttgaaccccggaccttacatatattatacattgtccataccaactgagctaaactca 897426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 141 - 182
Target Start/End: Complemental strand, 7282595 - 7282554
Alignment:
Q  141 tatattatgcattgttcataacaactgagctaaactcacaag 182  Q
    |||||||||||||||||||| ||||||||||||  |||||||    
T  7282595 tatattatgcattgttcataccaactgagctaagttcacaag 7282554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 110 - 187
Target Start/End: Original strand, 14202471 - 14202548
Alignment:
Q  110 agtggtcggggttcgaaccctggactttaagtatattatgcattgttcataacaactgagctaaactcacaaggacat 187  Q
    ||||||||||||| |||||| |||| |||  ||||||||||||| | || | |||||||| ||| ||||| |||||||    
T  14202471 agtggtcggggtttgaaccccggaccttacatatattatgcattatccaaatcaactgagttaagctcacgaggacat 14202548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 116 - 185
Target Start/End: Original strand, 14577505 - 14577574
Alignment:
Q  116 cggggttcgaaccctggactttaagtatattatgcattgttcataacaactgagctaaactcacaaggac 185  Q
    ||||||| |||| | |||||||   ||||||||||||||| | || |||||||||||||||||| |||||    
T  14577505 cggggtttgaactccggactttgcatatattatgcattgtccttaccaactgagctaaactcacgaggac 14577574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 178
Target Start/End: Original strand, 22474681 - 22474726
Alignment:
Q  133 actttaagtatattatgcattgttcataacaactgagctaaactca 178  Q
    |||||| |||||| |||||||||||||| |||||||||||| ||||    
T  22474681 actttacgtatatgatgcattgttcataccaactgagctaagctca 22474726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 141 - 186
Target Start/End: Original strand, 30051890 - 30051935
Alignment:
Q  141 tatattatgcattgttcataacaactgagctaaactcacaaggaca 186  Q
    ||||||||||||||| |||||||||||| |||| ||||| ||||||    
T  30051890 tatattatgcattgtccataacaactgaactaagctcacgaggaca 30051935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 185
Target Start/End: Complemental strand, 36071203 - 36071138
Alignment:
Q  120 gttcgaaccctggactttaagtatattatgcattgttcataacaactgagctaaactcacaaggac 185  Q
    |||||||||| | || |||  ||||||||||||||| | || ||||||| ||||||||||||||||    
T  36071203 gttcgaaccccgaaccttacatatattatgcattgtccttaccaactgacctaaactcacaaggac 36071138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 185
Target Start/End: Original strand, 9539220 - 9539260
Alignment:
Q  145 ttatgcattgttcataacaactgagctaaactcacaaggac 185  Q
    ||||||||||| ||||||||||||||||| ||||| |||||    
T  9539220 ttatgcattgtccataacaactgagctaagctcacgaggac 9539260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 185
Target Start/End: Complemental strand, 9913933 - 9913893
Alignment:
Q  145 ttatgcattgttcataacaactgagctaaactcacaaggac 185  Q
    |||||||||||||||| |||||||||||| ||||| |||||    
T  9913933 ttatgcattgttcataccaactgagctaagctcacgaggac 9913893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 186
Target Start/End: Original strand, 35021459 - 35021535
Alignment:
Q  110 agtggtcggggttcgaaccctggactttaagtatattatgcattgttcataacaactgagctaaactcacaaggaca 186  Q
    |||||||||||||||||||| | || ||   ||| ||||| ||||| |||| |||||||||||| ||||| ||||||    
T  35021459 agtggtcggggttcgaaccccgaaccttgcatattttatgtattgtccatatcaactgagctaagctcacgaggaca 35021535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 187
Target Start/End: Original strand, 50362140 - 50362208
Alignment:
Q  119 ggttcgaaccctggactttaagtatattatgcattgttcataacaactgagctaaactcacaaggacat 187  Q
    |||| ||||||||||| ||   ||||||||||||||| | || |||||||||||| ||||| |||||||    
T  50362140 ggtttgaaccctggaccttgcatatattatgcattgtccctaccaactgagctaagctcacgaggacat 50362208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 111 - 185
Target Start/End: Complemental strand, 44243941 - 44243867
Alignment:
Q  111 gtggtcggggttcgaaccctggactttaagtatattatgcattgttcataacaactgagctaaactcacaaggac 185  Q
    ||||| |||||| |||| |||||| |||  ||||||||||||||||| || |||||||||||||||||| |||||    
T  44243941 gtggttggggtttgaactctggaccttacatatattatgcattgttcctaccaactgagctaaactcacgaggac 44243867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 141 - 186
Target Start/End: Original strand, 3393591 - 3393636
Alignment:
Q  141 tatattatgcattgttcataacaactgagctaaactcacaaggaca 186  Q
    |||||||||||||||||||| |||||||||||||||||||| ||||    
T  3393591 tatattatgcattgttcatatcaactgagctaaactcacaatgaca 3393636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 186
Target Start/End: Complemental strand, 32944804 - 32944729
Alignment:
Q  111 gtggtcggggttcgaaccctggactttaagtatattatgcattgttcataacaactgagctaaactcacaaggaca 186  Q
    |||||||||||||||||||  ||| ||   ||||||||||||||| |||| ||||| |||||| ||||||||||||    
T  32944804 gtggtcggggttcgaaccccagacgttgcatatattatgcattgtccataccaactaagctaagctcacaaggaca 32944729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 111 - 185
Target Start/End: Original strand, 17139510 - 17139584
Alignment:
Q  111 gtggtcggggttcgaaccctggactttaagtatattatgcattgttcataacaactgagctaaactcacaaggac 185  Q
    |||||||||||| |||||| |||| || | ||||||||||||||| | || |||||||||||| ||||| |||||    
T  17139510 gtggtcggggtttgaaccccggaccttgaatatattatgcattgtccctaccaactgagctaagctcacgaggac 17139584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 184
Target Start/End: Complemental strand, 2613790 - 2613717
Alignment:
Q  111 gtggtcggggttcgaaccctggactttaagtatattatgcattgttcataacaactgagctaaactcacaagga 184  Q
    ||||||||||||||||||| | || |||  ||| ||||||||||| |||| |||||||||||| ||||| ||||    
T  2613790 gtggtcggggttcgaaccccgaaccttacatattttatgcattgtccataccaactgagctaagctcacgagga 2613717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 188
Target Start/End: Original strand, 17917131 - 17917208
Alignment:
Q  111 gtggtcggggttcgaaccctggactttaagtatattatgcattgttcataacaactgagctaaactcacaaggacatt 188  Q
    |||||||||||| ||| || | || |||  ||| ||||||||||| |||| |||||||||||||||||||| ||||||    
T  17917131 gtggtcggggtttgaatcccgaaccttacatattttatgcattgtccatatcaactgagctaaactcacaaagacatt 17917208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 141 - 186
Target Start/End: Complemental strand, 29936021 - 29935976
Alignment:
Q  141 tatattatgcattgttcataacaactgagctaaactcacaaggaca 186  Q
    ||||||||||||||| |||| |||||||| ||||||||||||||||    
T  29936021 tatattatgcattgtccataccaactgagttaaactcacaaggaca 29935976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 117 - 186
Target Start/End: Original strand, 37045145 - 37045214
Alignment:
Q  117 ggggttcgaaccctggactttaagtatattatgcattgttcataacaactgagctaaactcacaaggaca 186  Q
    |||||||||||||||||| ||   ||||||||||||||||| || |||||||||| | ||||| ||||||    
T  37045145 ggggttcgaaccctggaccttgcatatattatgcattgttcctaccaactgagctgagctcacgaggaca 37045214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 187
Target Start/End: Complemental strand, 32962631 - 32962555
Alignment:
Q  111 gtggtcggggttcgaaccctggactttaagtatattatgcattgttcataacaactgagctaaactcacaaggacat 187  Q
    |||||||||||| ||||||||||| ||   ||| |||||||||||||||| |||||||| ||  |||||||| ||||    
T  32962631 gtggtcggggtttgaaccctggaccttgcatattttatgcattgttcataccaactgagttatgctcacaagaacat 32962555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 181
Target Start/End: Original strand, 34521213 - 34521253
Alignment:
Q  141 tatattatgcattgttcataacaactgagctaaactcacaa 181  Q
    ||||||||||||||| |||| ||||||||||||||||||||    
T  34521213 tatattatgcattgtccataccaactgagctaaactcacaa 34521253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 187
Target Start/End: Complemental strand, 40227897 - 40227821
Alignment:
Q  111 gtggtcggggttcgaaccctggactttaagtatattatgcattgttcataacaactgagctaaactcacaaggacat 187  Q
    |||||||||||||||||||  ||| ||   ||| ||||||||||| |||| |||||||||||| |||| ||||||||    
T  40227897 gtggtcggggttcgaaccccagaccttgtatattttatgcattgtccataccaactgagctaagctcataaggacat 40227821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 185
Target Start/End: Complemental strand, 44641565 - 44641521
Alignment:
Q  141 tatattatgcattgttcataacaactgagctaaactcacaaggac 185  Q
    ||||||||||||||| |||| |||||||||||||||||| |||||    
T  44641565 tatattatgcattgtccatatcaactgagctaaactcacgaggac 44641521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 185
Target Start/End: Original strand, 48681956 - 48682000
Alignment:
Q  141 tatattatgcattgttcataacaactgagctaaactcacaaggac 185  Q
    |||||||||||||||||||| |||||||||||| ||||| |||||    
T  48681956 tatattatgcattgttcataccaactgagctaagctcacgaggac 48682000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 110 - 173
Target Start/End: Complemental strand, 18166671 - 18166608
Alignment:
Q  110 agtggtcggggttcgaaccctggactttaagtatattatgcattgttcataacaactgagctaa 173  Q
    ||||||||||||| |||||| |||||||   |||||||||||||||  ||| ||||||||||||    
T  18166671 agtggtcggggtttgaaccccggactttgcatatattatgcattgtctataccaactgagctaa 18166608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 186
Target Start/End: Original strand, 21965889 - 21965960
Alignment:
Q  116 cggggttcgaaccctggactttaagtatatt-atgcattgttcataacaactgagctaaactcacaaggaca 186  Q
    |||||||||||||| |||| ||   |||||| ||||||| |||||| |||||||||||| ||||||||||||    
T  21965889 cggggttcgaaccccggaccttgtatatatttatgcattattcatatcaactgagctaagctcacaaggaca 21965960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 141 - 184
Target Start/End: Complemental strand, 24695597 - 24695554
Alignment:
Q  141 tatattatgcattgttcataacaactgagctaaactcacaagga 184  Q
    ||||||||| |||||||||| |||||||||||||||||| ||||    
T  24695597 tatattatgtattgttcataccaactgagctaaactcacgagga 24695554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 189
Target Start/End: Complemental strand, 7550964 - 7550886
Alignment:
Q  111 gtggtcggggttcgaaccctggactttaagtatattatgcattgttcataacaactgagctaaactcacaaggacattt 189  Q
    |||||||||||||||| || |||| ||   ||| |||||||||||||||| |||||||| ||| ||||| | |||||||    
T  7550964 gtggtcggggttcgaatcccggaccttgtatattttatgcattgttcatatcaactgagttaagctcacgatgacattt 7550886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 179
Target Start/End: Complemental strand, 12613218 - 12613180
Alignment:
Q  141 tatattatgcattgttcataacaactgagctaaactcac 179  Q
    ||||||||||||| |||||| ||||||||||||||||||    
T  12613218 tatattatgcattattcataccaactgagctaaactcac 12613180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 187
Target Start/End: Original strand, 23953170 - 23953215
Alignment:
Q  141 tatattatgcattgttcataacaactgagctaaactcacaaggacat 187  Q
    ||||||||||||| | |||| ||||||||||||||||||||||||||    
T  23953170 tatattatgcatt-tccatatcaactgagctaaactcacaaggacat 23953215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 179
Target Start/End: Original strand, 24124853 - 24124891
Alignment:
Q  141 tatattatgcattgttcataacaactgagctaaactcac 179  Q
    ||||||||||||||| | |||||||||||||||||||||    
T  24124853 tatattatgcattgtccttaacaactgagctaaactcac 24124891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 187
Target Start/End: Original strand, 42045395 - 42045441
Alignment:
Q  141 tatattatgcattgttcataacaactgagctaaactcacaaggacat 187  Q
    ||||||||||||||| |||| |||||||||||| ||||| |||||||    
T  42045395 tatattatgcattgtccataccaactgagctaagctcacgaggacat 42045441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 179
Target Start/End: Complemental strand, 45701362 - 45701328
Alignment:
Q  145 ttatgcattgttcataacaactgagctaaactcac 179  Q
    |||||||||||||||| ||||||||||||||||||    
T  45701362 ttatgcattgttcataccaactgagctaaactcac 45701328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 141 - 186
Target Start/End: Original strand, 4770651 - 4770696
Alignment:
Q  141 tatattatgcattgttcataacaactgagctaaactcacaaggaca 186  Q
    ||||| |||||||||||||| |||||||| ||| ||||||||||||    
T  4770651 tatatcatgcattgttcatatcaactgagttaagctcacaaggaca 4770696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 118 - 179
Target Start/End: Complemental strand, 17284012 - 17283951
Alignment:
Q  118 gggttcgaaccctggactttaagtatattatgcattgttcataacaactgagctaaactcac 179  Q
    ||||||||||||||||| ||   ||||||||||||||| | || |||||||||||| |||||    
T  17284012 gggttcgaaccctggaccttgcatatattatgcattgtccttaccaactgagctaagctcac 17283951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 141 - 190
Target Start/End: Complemental strand, 26086967 - 26086918
Alignment:
Q  141 tatattatgcattgttcataacaactgagctaaactcacaaggacatttc 190  Q
    |||||||||||||| ||||| |||||||| ||| ||||| ||||||||||    
T  26086967 tatattatgcattgatcataccaactgagttaagctcacgaggacatttc 26086918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 141 - 182
Target Start/End: Original strand, 28832194 - 28832235
Alignment:
Q  141 tatattatgcattgttcataacaactgagctaaactcacaag 182  Q
    |||||||||||||||||||| |||||||| ||| ||||||||    
T  28832194 tatattatgcattgttcataccaactgagttaagctcacaag 28832235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 189
Target Start/End: Original strand, 29798118 - 29798187
Alignment:
Q  120 gttcgaaccctggactttaagtatattatgcattgttcataacaactgagctaaactcacaaggacattt 189  Q
    ||||||||||  ||| |||  ||||||||||||||||| || | |||||||||| |||||| ||||||||    
T  29798118 gttcgaaccccagaccttacatatattatgcattgttcttatcgactgagctaatctcacagggacattt 29798187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 176
Target Start/End: Complemental strand, 31962515 - 31962450
Alignment:
Q  111 gtggtcggggttcgaaccctggactttaagtatattatgcattgttcataacaactgagctaaact 176  Q
    ||||||||| |||||||||| |||||||  ||||||||||||||| | || ||||| || ||||||    
T  31962515 gtggtcgggattcgaaccctagactttacatatattatgcattgtccttaccaactaagttaaact 31962450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 141 - 186
Target Start/End: Complemental strand, 35308223 - 35308178
Alignment:
Q  141 tatattatgcattgttcataacaactgagctaaactcacaaggaca 186  Q
    |||||||||||||||||||| ||||||| |||| ||||| ||||||    
T  35308223 tatattatgcattgttcataccaactgaactaagctcacgaggaca 35308178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 145 - 186
Target Start/End: Complemental strand, 39452494 - 39452453
Alignment:
Q  145 ttatgcattgttcataacaactgagctaaactcacaaggaca 186  Q
    |||||||||||||||| |||||||||||| ||||| ||||||    
T  39452494 ttatgcattgttcataccaactgagctaagctcacgaggaca 39452453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 181
Target Start/End: Complemental strand, 8253777 - 8253737
Alignment:
Q  141 tatattatgcattgttcataacaactgagctaaactcacaa 181  Q
    ||||||||||||||| |||| |||||||||||| |||||||    
T  8253777 tatattatgcattgtccataccaactgagctaagctcacaa 8253737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 185
Target Start/End: Complemental strand, 12214031 - 12213987
Alignment:
Q  141 tatattatgcattgttcataacaactgagctaaactcacaaggac 185  Q
    ||||||||| ||||||| || |||||||||||| |||||||||||    
T  12214031 tatattatgtattgttcctatcaactgagctaagctcacaaggac 12213987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 185
Target Start/End: Complemental strand, 25086517 - 25086477
Alignment:
Q  145 ttatgcattgttcataacaactgagctaaactcacaaggac 185  Q
    ||||||||||| |||| |||||||||||| |||||||||||    
T  25086517 ttatgcattgtccataccaactgagctaagctcacaaggac 25086477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 173
Target Start/End: Original strand, 26803450 - 26803506
Alignment:
Q  117 ggggttcgaaccctggactttaagtatattatgcattgttcataacaactgagctaa 173  Q
    |||||| |||||| |||||||   ||||||||||||||| |||| ||||||||||||    
T  26803450 ggggtttgaaccccggactttgcatatattatgcattgtccataccaactgagctaa 26803506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 185
Target Start/End: Complemental strand, 27853393 - 27853349
Alignment:
Q  141 tatattatgcattgttcataacaactgagctaaactcacaaggac 185  Q
    |||||||||||||||||||| |||||||| ||| ||||| |||||    
T  27853393 tatattatgcattgttcataccaactgagttaagctcacgaggac 27853349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 185
Target Start/End: Original strand, 28712558 - 28712602
Alignment:
Q  141 tatattatgcattgttcataacaactgagctaaactcacaaggac 185  Q
    ||||||||||||||| ||||||||||||||||  ||||| |||||    
T  28712558 tatattatgcattgtgcataacaactgagctatgctcacgaggac 28712602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 185
Target Start/End: Original strand, 31890772 - 31890816
Alignment:
Q  141 tatattatgcattgttcataacaactgagctaaactcacaaggac 185  Q
    ||||||||||||||| | || |||||||||||||||||| |||||    
T  31890772 tatattatgcattgtccttaccaactgagctaaactcacgaggac 31890816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 185
Target Start/End: Complemental strand, 48100756 - 48100716
Alignment:
Q  145 ttatgcattgttcataacaactgagctaaactcacaaggac 185  Q
    ||||||||||| |||| |||||||||||| |||||||||||    
T  48100756 ttatgcattgtccataccaactgagctaagctcacaaggac 48100716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 37; Significance: 0.000000000006; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 111 - 179
Target Start/End: Complemental strand, 26409321 - 26409253
Alignment:
Q  111 gtggtcggggttcgaaccctggactttaagtatattatgcattgttcataacaactgagctaaactcac 179  Q
    |||| |||||||||||||| |||| |||  ||||||||||||||| |||| |||||||||||| |||||    
T  26409321 gtgggcggggttcgaaccccggaccttacatatattatgcattgtccataccaactgagctaagctcac 26409253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 141 - 187
Target Start/End: Original strand, 12909189 - 12909235
Alignment:
Q  141 tatattatgcattgttcataacaactgagctaaactcacaaggacat 187  Q
    |||||||||||||||||||| ||||||||||||| |||| |||||||    
T  12909189 tatattatgcattgttcataccaactgagctaaattcacgaggacat 12909235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 141 - 186
Target Start/End: Original strand, 18489099 - 18489144
Alignment:
Q  141 tatattatgcattgttcataacaactgagctaaactcacaaggaca 186  Q
    |||||||||||||||  ||| |||||||||||||||||||||||||    
T  18489099 tatattatgcattgtctataccaactgagctaaactcacaaggaca 18489144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 187
Target Start/End: Complemental strand, 6624844 - 6624768
Alignment:
Q  111 gtggtcggggttcgaaccctggactttaagtatattatgcattgttcataacaactgagctaaactcacaaggacat 187  Q
    |||| |||||||||||||| |||| ||   ||||||||||||||| |||  |||||||||||| ||||| |||||||    
T  6624844 gtggccggggttcgaaccccggaccttgcatatattatgcattgtccatgccaactgagctaagctcacgaggacat 6624768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 171
Target Start/End: Complemental strand, 26655532 - 26655472
Alignment:
Q  111 gtggtcggggttcgaaccctggactttaagtatattatgcattgttcataacaactgagct 171  Q
    |||| |||||||||||||| |||| |||  ||||||||||||||| |||| ||||||||||    
T  26655532 gtggccggggttcgaaccccggaccttacatatattatgcattgtccataccaactgagct 26655472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 171
Target Start/End: Complemental strand, 26927117 - 26927057
Alignment:
Q  111 gtggtcggggttcgaaccctggactttaagtatattatgcattgttcataacaactgagct 171  Q
    |||| |||||||||||||| |||| |||  ||||||||||||||| |||| ||||||||||    
T  26927117 gtggccggggttcgaaccccggaccttacatatattatgcattgtccataccaactgagct 26927057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 186
Target Start/End: Complemental strand, 37932391 - 37932323
Alignment:
Q  118 gggttcgaaccctggactttaagtatattatgcattgttcataacaactgagctaaactcacaaggaca 186  Q
    |||||||||||| |||| ||   ||||||||||||||| |||| |||||||||||| ||||| ||||||    
T  37932391 gggttcgaaccccggaccttgcatatattatgcattgtccataccaactgagctaagctcacgaggaca 37932323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 111 - 186
Target Start/End: Complemental strand, 10199087 - 10199012
Alignment:
Q  111 gtggtcggggttcgaaccctggactttaagtatattatgcattgttcataacaactgagctaaactcacaaggaca 186  Q
    ||||||||| |||||||||   || |||  ||||||||||||||| |||| |||||||||||| ||||| ||||||    
T  10199087 gtggtcgggattcgaaccccacaccttatatatattatgcattgtccataccaactgagctaagctcacgaggaca 10199012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 185
Target Start/End: Complemental strand, 15889479 - 15889405
Alignment:
Q  111 gtggtcggggttcgaaccctggactttaagtatattatgcattgttcataacaactgagctaaactcacaaggac 185  Q
    |||||||||||| ||||||| ||| ||   ||||||||||||||| | || |||||||||||| ||||| |||||    
T  15889479 gtggtcggggtttgaaccctagaccttgcatatattatgcattgtccctaccaactgagctaagctcacgaggac 15889405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 187
Target Start/End: Original strand, 17239404 - 17239450
Alignment:
Q  141 tatattatgcattgttcataacaactgagctaaactcacaaggacat 187  Q
    ||||||||||||||| |||| ||||||||| || |||||||||||||    
T  17239404 tatattatgcattgtccataccaactgagcaaagctcacaaggacat 17239450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 179
Target Start/End: Complemental strand, 26722955 - 26722917
Alignment:
Q  141 tatattatgcattgttcataacaactgagctaaactcac 179  Q
    ||||||||||||||| ||||||||||||| |||||||||    
T  26722955 tatattatgcattgtacataacaactgagttaaactcac 26722917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 179
Target Start/End: Complemental strand, 26992704 - 26992666
Alignment:
Q  141 tatattatgcattgttcataacaactgagctaaactcac 179  Q
    ||||||||||||||| ||||||||||||| |||||||||    
T  26992704 tatattatgcattgtacataacaactgagttaaactcac 26992666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 187
Target Start/End: Original strand, 27721698 - 27721744
Alignment:
Q  141 tatattatgcattgttcataacaactgagctaaactcacaaggacat 187  Q
    ||||||||||||||||| || |||||||||||| ||||| |||||||    
T  27721698 tatattatgcattgttcctaccaactgagctaagctcacgaggacat 27721744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 179
Target Start/End: Complemental strand, 27903151 - 27903113
Alignment:
Q  141 tatattatgcattgttcataacaactgagctaaactcac 179  Q
    |||||||||||||||||||| ||||||| ||||||||||    
T  27903151 tatattatgcattgttcataccaactgaactaaactcac 27903113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 179
Target Start/End: Complemental strand, 33584122 - 33584084
Alignment:
Q  141 tatattatgcattgttcataacaactgagctaaactcac 179  Q
    |||||||| ||||||||||| ||||||||||||||||||    
T  33584122 tatattatacattgttcatatcaactgagctaaactcac 33584084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 186
Target Start/End: Original strand, 37073762 - 37073836
Alignment:
Q  112 tggtcggggttcgaaccctggactttaagtatattatgcattgttcataacaactgagctaaactcacaaggaca 186  Q
    |||||||||||||||||| | || |||  |||||||||||| || |||| ||| |||| ||| ||||||||||||    
T  37073762 tggtcggggttcgaaccccgaaccttacatatattatgcatagtccataccaattgagttaatctcacaaggaca 37073836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 188
Target Start/End: Original strand, 5107238 - 5107315
Alignment:
Q  111 gtggtcggggttcgaaccctggactttaagtatattatgcattgttcataacaactgagctaaactcacaaggacatt 188  Q
    ||||||||||||||||||  |||| ||   ||||||||||||| |||||| |||||||| ||| ||||| ||| ||||    
T  5107238 gtggtcggggttcgaacctcggaccttgcatatattatgcattattcataccaactgagttaagctcacgagggcatt 5107315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 188
Target Start/End: Original strand, 11637565 - 11637642
Alignment:
Q  111 gtggtcggggttcgaaccctggactttaagtatattatgcattgttcataacaactgagctaaactcacaaggacatt 188  Q
    ||||||||||||||||||| | || ||   ||| ||||||||||| |||| |||||||| ||| ||||| ||||||||    
T  11637565 gtggtcggggttcgaaccccgaaccttgcatattttatgcattgtccataccaactgagttaagctcacgaggacatt 11637642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 185
Target Start/End: Complemental strand, 8350728 - 8350664
Alignment:
Q  121 ttcgaaccctggactttaagtatattatgcattgttcataacaactgagctaaactcacaaggac 185  Q
    |||||||||| ||||||   ||||||||||||||| |||  |||||||| ||||||||| |||||    
T  8350728 ttcgaaccctagactttgcatatattatgcattgtccatgccaactgagttaaactcacgaggac 8350664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 185
Target Start/End: Original strand, 10704358 - 10704398
Alignment:
Q  145 ttatgcattgttcataacaactgagctaaactcacaaggac 185  Q
    ||||||||||| |||| |||||||||||| |||||||||||    
T  10704358 ttatgcattgtccataccaactgagctaagctcacaaggac 10704398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 176
Target Start/End: Complemental strand, 13409617 - 13409553
Alignment:
Q  112 tggtcggggttcgaaccctggactttaagtatattatgcattgttcataacaactgagctaaact 176  Q
    ||||||||||| |||| | |||| ||   ||||||||||||||||| || |||||||||||||||    
T  13409617 tggtcggggtttgaactccggaccttgtatatattatgcattgttcttatcaactgagctaaact 13409553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 179
Target Start/End: Complemental strand, 13864412 - 13864344
Alignment:
Q  111 gtggtcggggttcgaaccctggactttaagtatattatgcattgttcataacaactgagctaaactcac 179  Q
    |||||||||||| |||||| |||| ||   ||||||||| |||||||||| |||||||| ||| |||||    
T  13864412 gtggtcggggtttgaaccccggaccttgcatatattatgtattgttcataccaactgagttaagctcac 13864344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 185
Target Start/End: Complemental strand, 16188862 - 16188818
Alignment:
Q  141 tatattatgcattgttcataacaactgagctaaactcacaaggac 185  Q
    ||||||||||||||| |||| ||||||||||||  ||||||||||    
T  16188862 tatattatgcattgtccataccaactgagctaagttcacaaggac 16188818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 185
Target Start/End: Complemental strand, 16188964 - 16188920
Alignment:
Q  141 tatattatgcattgttcataacaactgagctaaactcacaaggac 185  Q
    ||||||||||||||| |||| ||||||||||||  ||||||||||    
T  16188964 tatattatgcattgtccataccaactgagctaagttcacaaggac 16188920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 184
Target Start/End: Complemental strand, 17862034 - 17861974
Alignment:
Q  124 gaaccctggactttaagtatattatgcattgttcataacaactgagctaaactcacaagga 184  Q
    |||||||| |||||   ||||||||||||||| | || |||||||||||||||||| ||||    
T  17862034 gaaccctgaactttgcatatattatgcattgtccctaccaactgagctaaactcacgagga 17861974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 185
Target Start/End: Original strand, 18589890 - 18589934
Alignment:
Q  141 tatattatgcattgttcataacaactgagctaaactcacaaggac 185  Q
    |||||||||||||||||||| |||||||| ||| ||||| |||||    
T  18589890 tatattatgcattgttcataccaactgagttaagctcacgaggac 18589934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 189
Target Start/End: Original strand, 20365495 - 20365543
Alignment:
Q  141 tatattatgcattgttcataacaactgagctaaactcacaaggacattt 189  Q
    |||||||||||||||||  | |||||||||||||||||| | |||||||    
T  20365495 tatattatgcattgttccgaccaactgagctaaactcacgatgacattt 20365543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 189
Target Start/End: Complemental strand, 30488963 - 30488915
Alignment:
Q  141 tatattatgcattgttcataacaactgagctaaactcacaaggacattt 189  Q
    |||||||||||||||||||| ||||||| |||| ||||| | |||||||    
T  30488963 tatattatgcattgttcatatcaactgaactaagctcacgatgacattt 30488915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 173
Target Start/End: Original strand, 31602848 - 31602880
Alignment:
Q  141 tatattatgcattgttcataacaactgagctaa 173  Q
    |||||||||||||||||||| ||||||||||||    
T  31602848 tatattatgcattgttcataccaactgagctaa 31602880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 185
Target Start/End: Original strand, 40730218 - 40730262
Alignment:
Q  141 tatattatgcattgttcataacaactgagctaaactcacaaggac 185  Q
    |||||||||||||||||||| ||||| |||||| ||||| |||||    
T  40730218 tatattatgcattgttcatatcaacttagctaagctcacgaggac 40730262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 185
Target Start/End: Original strand, 42663227 - 42663271
Alignment:
Q  141 tatattatgcattgttcataacaactgagctaaactcacaaggac 185  Q
    ||||||||| ||||||| ||||||||||| ||||||||| |||||    
T  42663227 tatattatgtattgttcctaacaactgagttaaactcacgaggac 42663271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 36; Significance: 0.00000000002; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 188
Target Start/End: Original strand, 43345030 - 43345077
Alignment:
Q  141 tatattatgcattgttcataacaactgagctaaactcacaaggacatt 188  Q
    ||||||||| |||||||||| |||||||||||||||||| ||||||||    
T  43345030 tatattatgtattgttcataccaactgagctaaactcacgaggacatt 43345077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 141 - 186
Target Start/End: Original strand, 21331440 - 21331485
Alignment:
Q  141 tatattatgcattgttcataacaactgagctaaactcacaaggaca 186  Q
    ||||||||||||||| ||||||||||||||||| ||||| ||||||    
T  21331440 tatattatgcattgtccataacaactgagctaagctcacgaggaca 21331485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 180
Target Start/End: Original strand, 48209204 - 48209273
Alignment:
Q  111 gtggtcggggttcgaaccctggactttaagtatattatgcattgttcataacaactgagctaaactcaca 180  Q
    |||||||||||| |||||||| || |||  ||||||||| ||||| | || |||||||||||||||||||    
T  48209204 gtggtcggggtttgaaccctgaaccttatatatattatgtattgtccctatcaactgagctaaactcaca 48209273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 141 - 186
Target Start/End: Complemental strand, 53996337 - 53996292
Alignment:
Q  141 tatattatgcattgttcataacaactgagctaaactcacaaggaca 186  Q
    ||||||||||||||| |||| |||||||||||| ||||||||||||    
T  53996337 tatattatgcattgtccataccaactgagctaagctcacaaggaca 53996292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 192
Target Start/End: Complemental strand, 13800730 - 13800654
Alignment:
Q  116 cggggttcgaaccctggactttaagtatattatgcattgttcataacaactgagctaaactcacaaggacatttcaa 192  Q
    ||||||||||||  ||||| ||   ||||||||||||||||| || |||||||||||| |||||| |||||| ||||    
T  13800730 cggggttcgaactgtggaccttgcatatattatgcattgttcttaccaactgagctaagctcacatggacatatcaa 13800654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 111 - 186
Target Start/End: Complemental strand, 3100289 - 3100214
Alignment:
Q  111 gtggtcggggttcgaaccctggactttaagtatattatgcattgttcataacaactgagctaaactcacaaggaca 186  Q
    |||| |||||||| |||||||||||||   ||| ||||||||||| || | |||||||||||| ||||| ||||||    
T  3100289 gtggccggggttcaaaccctggactttgcatatgttatgcattgtccacaccaactgagctaagctcacgaggaca 3100214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 111 - 186
Target Start/End: Complemental strand, 7827576 - 7827501
Alignment:
Q  111 gtggtcggggttcgaaccctggactttaagtatattatgcattgttcataacaactgagctaaactcacaaggaca 186  Q
    ||||||||| ||||||| |  ||| |||  ||||||||||||||| |||| |||||||| ||||||||| ||||||    
T  7827576 gtggtcgggtttcgaactccagaccttacatatattatgcattgtccatatcaactgagttaaactcacgaggaca 7827501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 141 - 176
Target Start/End: Original strand, 39100107 - 39100142
Alignment:
Q  141 tatattatgcattgttcataacaactgagctaaact 176  Q
    |||||||||||||||| |||||||||||||||||||    
T  39100107 tatattatgcattgtttataacaactgagctaaact 39100142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 185
Target Start/End: Original strand, 7464484 - 7464558
Alignment:
Q  111 gtggtcggggttcgaaccctggactttaagtatattatgcattgttcataacaactgagctaaactcacaaggac 185  Q
    |||||||||||| |||||| |||| |||  ||||||||||||||| | || |||||||| ||| ||||| |||||    
T  7464484 gtggtcggggtttgaaccccggaccttacatatattatgcattgtccctaccaactgagttaagctcacgaggac 7464558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 185
Target Start/End: Original strand, 28244101 - 28244171
Alignment:
Q  115 tcggggttcgaaccctggactttaagtatattatgcattgttcataacaactgagctaaactcacaaggac 185  Q
    ||||||||||||||| |||| ||   ||| |||||||||||||||| |||||||| ||| ||||| |||||    
T  28244101 tcggggttcgaaccccggaccttgcatattttatgcattgttcataccaactgagttaagctcacgaggac 28244171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 185
Target Start/End: Original strand, 38130952 - 38131026
Alignment:
Q  111 gtggtcggggttcgaaccctggactttaagtatattatgcattgttcataacaactgagctaaactcacaaggac 185  Q
    |||| ||||||| |||||| |||| ||   ||||||||||||||| |||| |||||||| ||| |||||||||||    
T  38130952 gtggccggggtttgaaccccggaccttgcatatattatgcattgtccataccaactgagttaagctcacaaggac 38131026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 187
Target Start/End: Complemental strand, 42269336 - 42269290
Alignment:
Q  141 tatattatgcattgttcataacaactgagctaaactcacaaggacat 187  Q
    ||||||||||||||| ||||  |||||||||||||||||||| ||||    
T  42269336 tatattatgcattgtccatactaactgagctaaactcacaagaacat 42269290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 179
Target Start/End: Original strand, 43490440 - 43490478
Alignment:
Q  141 tatattatgcattgttcataacaactgagctaaactcac 179  Q
    |||||||||||||||||||| |||||||||||| |||||    
T  43490440 tatattatgcattgttcataccaactgagctaagctcac 43490478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 186
Target Start/End: Complemental strand, 44579699 - 44579629
Alignment:
Q  116 cggggttcgaaccctggactttaagtatattatgcattgttcataacaactgagctaaactcacaaggaca 186  Q
    |||||||||||||| |||| ||   ||| ||||||||||| |||| |||||||||||| ||||| ||||||    
T  44579699 cggggttcgaaccccggaccttgcatattttatgcattgtccataccaactgagctaagctcacgaggaca 44579629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 186
Target Start/End: Complemental strand, 46903963 - 46903901
Alignment:
Q  124 gaaccctggactttaagtatattatgcattgttcataacaactgagctaaactcacaaggaca 186  Q
    ||||||||||| |||  ||||||||||||||| |||| |||||||| ||| ||||| ||||||    
T  46903963 gaaccctggaccttacatatattatgcattgtccataccaactgagttaatctcacgaggaca 46903901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 141 - 186
Target Start/End: Original strand, 3612205 - 3612250
Alignment:
Q  141 tatattatgcattgttcataacaactgagctaaactcacaaggaca 186  Q
    ||||||||||||| | |||| |||||||||||| ||||||||||||    
T  3612205 tatattatgcattatccatatcaactgagctaagctcacaaggaca 3612250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 110 - 187
Target Start/End: Original strand, 4332659 - 4332736
Alignment:
Q  110 agtggtcggggttcgaaccctggactttaagtatattatgcattgttcataacaactgagctaaactcacaaggacat 187  Q
    ||||||||| ||| |||||| |||| ||   ||||||||||||| |||| | |||||||||||| ||||| |||||||    
T  4332659 agtggtcggagtttgaaccccggaccttggatatattatgcattattcaaaccaactgagctaagctcacgaggacat 4332736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 184
Target Start/End: Complemental strand, 5030241 - 5030200
Alignment:
Q  143 tattatgcattgttcataacaactgagctaaactcacaagga 184  Q
    |||||||||||||||||| ||||||| |||||||||| ||||    
T  5030241 tattatgcattgttcataccaactgaactaaactcacgagga 5030200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 141 - 186
Target Start/End: Complemental strand, 7829934 - 7829889
Alignment:
Q  141 tatattatgcattgttcataacaactgagctaaactcacaaggaca 186  Q
    ||||||||||||||| |||| |||||||| ||||||||| ||||||    
T  7829934 tatattatgcattgtccatatcaactgagttaaactcacgaggaca 7829889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 141 - 186
Target Start/End: Original strand, 10498718 - 10498763
Alignment:
Q  141 tatattatgcattgttcataacaactgagctaaactcacaaggaca 186  Q
    ||||||||||||||| |||| |||||||||||| ||||| ||||||    
T  10498718 tatattatgcattgtccataccaactgagctaagctcacgaggaca 10498763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 169
Target Start/End: Complemental strand, 32303419 - 32303370
Alignment:
Q  120 gttcgaaccctggactttaagtatattatgcattgttcataacaactgag 169  Q
    |||||||||| |||| ||  ||||||||||||||||||||| ||||||||    
T  32303419 gttcgaaccccggaccttgcgtatattatgcattgttcataccaactgag 32303370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 145 - 186
Target Start/End: Complemental strand, 51505907 - 51505866
Alignment:
Q  145 ttatgcattgttcataacaactgagctaaactcacaaggaca 186  Q
    ||||||||||| |||| ||||||||||||||||| |||||||    
T  51505907 ttatgcattgtccatatcaactgagctaaactcataaggaca 51505866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 172
Target Start/End: Complemental strand, 52456549 - 52456488
Alignment:
Q  111 gtggtcggggttcgaaccctggactttaagtatattatgcattgttcataacaactgagcta 172  Q
    |||||| |||||||||||| |||| |||  ||| ||||||||| | ||||||||||||||||    
T  52456549 gtggtcagggttcgaaccccggaccttacatattttatgcattatccataacaactgagcta 52456488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 188
Target Start/End: Complemental strand, 55198918 - 55198873
Alignment:
Q  143 tattatgcattgttcataacaactgagctaaactcacaaggacatt 188  Q
    ||||||||||||| | || ||||||||||||||||||| |||||||    
T  55198918 tattatgcattgtccttaccaactgagctaaactcacagggacatt 55198873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 186
Target Start/End: Original strand, 1149069 - 1149137
Alignment:
Q  118 gggttcgaaccctggactttaagtatattatgcattgttcataacaactgagctaaactcacaaggaca 186  Q
    ||||||||||||| ||| ||   ||||||||||||||| | || |||||||||||| ||||| ||||||    
T  1149069 gggttcgaaccctagaccttgcatatattatgcattgtccttaccaactgagctaagctcacgaggaca 1149137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 185
Target Start/End: Complemental strand, 2496593 - 2496549
Alignment:
Q  141 tatattatgcattgttcataacaactgagctaaactcacaaggac 185  Q
    |||||||||||||||||||| ||||||| |||| ||||| |||||    
T  2496593 tatattatgcattgttcatagcaactgaactaagctcacgaggac 2496549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 186
Target Start/End: Original strand, 4947819 - 4947895
Alignment:
Q  111 gtggtcggggttcgaaccctggactttaagtatattatgcatt-gttcataacaactgagctaaactcacaaggaca 186  Q
    ||||||||||||| |||||  ||| |||  ||| ||||||||| |||| || ||||| |||||||||||||||||||    
T  4947819 gtggtcggggttcaaaccccagaccttacatattttatgcatttgttcctaccaactaagctaaactcacaaggaca 4947895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 185
Target Start/End: Complemental strand, 7868760 - 7868716
Alignment:
Q  141 tatattatgcattgttcataacaactgagctaaactcacaaggac 185  Q
    ||||||||||||||||| || |||||||||||| ||||| |||||    
T  7868760 tatattatgcattgttcttaccaactgagctaagctcacgaggac 7868716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 189
Target Start/End: Complemental strand, 7938762 - 7938714
Alignment:
Q  141 tatattatgcattgttcataacaactgagctaaactcacaaggacattt 189  Q
    |||||||||||||||||||| ||||||| |||| ||||| | |||||||    
T  7938762 tatattatgcattgttcataccaactgaactaagctcacgatgacattt 7938714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 173
Target Start/End: Complemental strand, 10840456 - 10840424
Alignment:
Q  141 tatattatgcattgttcataacaactgagctaa 173  Q
    |||||||||||||||||||| ||||||||||||    
T  10840456 tatattatgcattgttcataccaactgagctaa 10840424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 170
Target Start/End: Original strand, 19139427 - 19139483
Alignment:
Q  114 gtcggggttcgaaccctggactttaagtatattatgcattgttcataacaactgagc 170  Q
    ||||||||| |||||||| ||||||  ||| ||||||||||||| || |||||||||    
T  19139427 gtcggggtttgaaccctgaactttacatatgttatgcattgttcctaccaactgagc 19139483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 185
Target Start/End: Original strand, 38559919 - 38559963
Alignment:
Q  141 tatattatgcattgttcataacaactgagctaaactcacaaggac 185  Q
    |||||||||||||||||||| |||||||| ||  |||||||||||    
T  38559919 tatattatgcattgttcataccaactgagttacgctcacaaggac 38559963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 186
Target Start/End: Complemental strand, 53047849 - 53047773
Alignment:
Q  110 agtggtcggggttcgaaccctggactttaagtatattatgcattgttcataacaactgagctaaactcacaaggaca 186  Q
    ||||||||||||| |||||| | |||||   || |||||  |||||||||| |||||||||||| ||||| ||||||    
T  53047849 agtggtcggggtttgaaccccgaactttgcatacattatcaattgttcataccaactgagctaatctcacgaggaca 53047773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 141 - 187
Target Start/End: Complemental strand, 5220 - 5174
Alignment:
Q  141 tatattatgcattgttcataacaactgagctaaactcacaaggacat 187  Q
    ||||||||||||||| |||| ||| ||||||||||||||||||||||    
T  5220 tatattatgcattgtccataccaattgagctaaactcacaaggacat 5174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1320 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold1320
Description:

Target: scaffold1320; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 111 - 174
Target Start/End: Original strand, 1753 - 1815
Alignment:
Q  111 gtggtcggggttcgaaccctggactttaagtatattatgcattgttcataacaactgagctaaa 174  Q
    |||||||||||| |||||||  || ||| |||||||||||||||||| || |||||||||||||    
T  1753 gtggtcggggtttgaacccta-accttatgtatattatgcattgttcctaccaactgagctaaa 1815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 141 - 184
Target Start/End: Original strand, 31178 - 31221
Alignment:
Q  141 tatattatgcattgttcataacaactgagctaaactcacaagga 184  Q
    ||||||||||||||| |||| |||||||||||||||| ||||||    
T  31178 tatattatgcattgtccataccaactgagctaaactcgcaagga 31221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 179
Target Start/End: Original strand, 14209 - 14247
Alignment:
Q  141 tatattatgcattgttcataacaactgagctaaactcac 179  Q
    |||||||||||||||||||| |||||||| |||||||||    
T  14209 tatattatgcattgttcataccaactgagttaaactcac 14247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 111 - 186
Target Start/End: Complemental strand, 64286 - 64211
Alignment:
Q  111 gtggtcggggttcgaaccctggactttaagtatattatgcattgttcataacaactgagctaaactcacaaggaca 186  Q
    |||||||||||||||| || |||| ||   ||||||||||||||| |||| ||  |||||||| ||||||||||||    
T  64286 gtggtcggggttcgaatcccggaccttgcatatattatgcattgtccataccagttgagctaagctcacaaggaca 64211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 185
Target Start/End: Original strand, 221006 - 221080
Alignment:
Q  111 gtggtcggggttcgaaccctggactttaagtatattatgcattgttcataacaactgagctaaactcacaaggac 185  Q
    |||||||||||| ||||||| ||||||   ||||||||| ||| | | || ||||||||||||||||| ||||||    
T  221006 gtggtcggggtttgaaccctagactttgcatatattatgtattatccctaccaactgagctaaactcataaggac 221080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 141 - 186
Target Start/End: Complemental strand, 17542 - 17497
Alignment:
Q  141 tatattatgcattgttcataacaactgagctaaactcacaaggaca 186  Q
    ||||||||||||||| |||  || ||||||||||||||||||||||    
T  17542 tatattatgcattgtccatgtcagctgagctaaactcacaaggaca 17497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 116 - 185
Target Start/End: Complemental strand, 239870 - 239801
Alignment:
Q  116 cggggttcgaaccctggactttaagtatattatgcattgttcataacaactgagctaaactcacaaggac 185  Q
    ||||||| |||| | |||||||   ||||||||||||||| | || |||||||||||||||||| |||||    
T  239870 cggggtttgaactccggactttgcatatattatgcattgtccttaccaactgagctaaactcacgaggac 239801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 185
Target Start/End: Original strand, 28140 - 28180
Alignment:
Q  145 ttatgcattgttcataacaactgagctaaactcacaaggac 185  Q
    ||||||||||| |||| |||||||||||||||||| |||||    
T  28140 ttatgcattgtccataccaactgagctaaactcacgaggac 28180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 179
Target Start/End: Complemental strand, 17768 - 17732
Alignment:
Q  143 tattatgcattgttcataacaactgagctaaactcac 179  Q
    ||||||||||||| |||| ||||||||||||||||||    
T  17768 tattatgcattgtccataccaactgagctaaactcac 17732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 185
Target Start/End: Complemental strand, 5463 - 5419
Alignment:
Q  141 tatattatgcattgttcataacaactgagctaaactcacaaggac 185  Q
    ||||||||||||||||| || |||||||||||| ||||| |||||    
T  5463 tatattatgcattgttcttaccaactgagctaagctcacgaggac 5419  T

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Target: scaffold0021 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 187
Target Start/End: Complemental strand, 161209 - 161133
Alignment:
Q  111 gtggtcggggttcgaaccctggactttaagtatattatgcattgttcataacaactgagctaaactcacaaggacat 187  Q
    |||||||||||| |||||| | || ||   ||| ||||||||||| |||| |||||||| ||| |||||||||||||    
T  161209 gtggtcggggtttgaaccccgaaccttgcatattttatgcattgtccataccaactgagttaagctcacaaggacat 161133  T

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