View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15945_low_6 (Length: 459)

Name: NF15945_low_6
Description: NF15945
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15945_low_6
NF15945_low_6
[»] chr8 (18 HSPs)
chr8 (301-441)||(44000420-44000560)
chr8 (13-130)||(9800039-9800156)
chr8 (13-130)||(26997842-26997959)
chr8 (19-130)||(17914197-17914308)
chr8 (21-130)||(13315202-13315311)
chr8 (19-130)||(10047479-10047589)
chr8 (19-123)||(6297841-6297945)
chr8 (22-130)||(7344838-7344946)
chr8 (23-127)||(26243378-26243482)
chr8 (19-129)||(6297463-6297573)
chr8 (13-130)||(17915480-17915596)
chr8 (39-130)||(4624533-4624624)
chr8 (30-132)||(12489517-12489618)
chr8 (19-129)||(44148578-44148688)
chr8 (23-70)||(21006105-21006152)
chr8 (31-130)||(29917529-29917627)
chr8 (19-125)||(44024230-44024336)
chr8 (101-137)||(4694493-4694529)
[»] chr4 (27 HSPs)
chr4 (16-130)||(29691525-29691639)
chr4 (19-129)||(3296544-3296654)
chr4 (19-130)||(48553896-48554007)
chr4 (19-137)||(30608612-30608730)
chr4 (13-130)||(51906792-51906909)
chr4 (19-130)||(7118143-7118254)
chr4 (19-129)||(34129279-34129389)
chr4 (13-130)||(35166839-35166956)
chr4 (13-105)||(30608270-30608362)
chr4 (19-135)||(51906415-51906531)
chr4 (19-130)||(3296923-3297034)
chr4 (31-130)||(54143492-54143591)
chr4 (31-130)||(54167494-54167593)
chr4 (13-119)||(26168004-26168109)
chr4 (28-130)||(38759704-38759806)
chr4 (22-130)||(48760097-48760205)
chr4 (19-126)||(56106440-56106547)
chr4 (40-130)||(54168823-54168913)
chr4 (31-132)||(54142323-54142424)
chr4 (14-130)||(47058481-47058597)
chr4 (13-70)||(1791521-1791578)
chr4 (29-122)||(26984152-26984245)
chr4 (13-130)||(28505209-28505325)
chr4 (31-135)||(789890-789993)
chr4 (83-135)||(3296814-3296866)
chr4 (18-130)||(34128994-34129106)
chr4 (14-130)||(47053761-47053877)
[»] scaffold0009 (1 HSPs)
scaffold0009 (13-137)||(108095-108219)
[»] chr5 (24 HSPs)
chr5 (18-129)||(87239-87350)
chr5 (19-129)||(16284275-16284385)
chr5 (22-130)||(18999622-18999730)
chr5 (19-130)||(18999366-18999477)
chr5 (18-132)||(8648043-8648157)
chr5 (19-130)||(31176507-31176618)
chr5 (19-129)||(8750339-8750449)
chr5 (13-130)||(31588319-31588437)
chr5 (13-128)||(13987284-13987400)
chr5 (50-130)||(22231170-22231250)
chr5 (17-130)||(14625122-14625234)
chr5 (19-130)||(3406839-3406949)
chr5 (13-130)||(3191798-3191914)
chr5 (50-130)||(119184-119264)
chr5 (15-70)||(3935450-3935505)
chr5 (25-136)||(14626074-14626185)
chr5 (16-142)||(8749998-8750124)
chr5 (100-130)||(15978389-15978419)
chr5 (54-135)||(18339314-18339395)
chr5 (42-130)||(87019-87107)
chr5 (13-89)||(3935667-3935743)
chr5 (105-133)||(29959175-29959203)
chr5 (21-65)||(30415465-30415509)
chr5 (105-141)||(34448483-34448519)
[»] chr1 (23 HSPs)
chr1 (19-130)||(18180257-18180368)
chr1 (13-130)||(31436356-31436473)
chr1 (16-130)||(18179879-18179993)
chr1 (19-130)||(9880484-9880595)
chr1 (13-130)||(3591310-3591427)
chr1 (13-130)||(5683534-5683651)
chr1 (13-130)||(50359412-50359529)
chr1 (12-132)||(48154972-48155091)
chr1 (20-130)||(42723235-42723349)
chr1 (18-130)||(19895400-19895512)
chr1 (13-135)||(9880763-9880885)
chr1 (13-130)||(6751326-6751444)
chr1 (40-137)||(1500981-1501078)
chr1 (13-130)||(5683161-5683278)
chr1 (21-130)||(50359125-50359234)
chr1 (31-130)||(36792240-36792338)
chr1 (31-130)||(36793565-36793664)
chr1 (16-130)||(45664687-45664801)
chr1 (22-132)||(4288422-4288527)
chr1 (19-128)||(6751049-6751158)
chr1 (19-67)||(47541803-47541851)
chr1 (99-130)||(47542078-47542109)
chr1 (41-121)||(47541527-47541607)
[»] chr2 (24 HSPs)
chr2 (18-135)||(2517408-2517525)
chr2 (19-131)||(2191216-2191328)
chr2 (18-130)||(39729584-39729696)
chr2 (19-130)||(3691368-3691479)
chr2 (25-130)||(18107410-18107515)
chr2 (14-130)||(21217295-21217411)
chr2 (14-130)||(21264991-21265107)
chr2 (15-130)||(21182307-21182422)
chr2 (14-119)||(3691094-3691199)
chr2 (19-128)||(24093535-24093644)
chr2 (31-130)||(2035608-2035707)
chr2 (19-130)||(21216923-21217034)
chr2 (19-130)||(21265368-21265479)
chr2 (21-130)||(32860814-32860923)
chr2 (19-130)||(24093156-24093267)
chr2 (13-130)||(39096930-39097046)
chr2 (31-130)||(10709475-10709574)
chr2 (19-130)||(32114450-32114561)
chr2 (31-130)||(39096524-39096622)
chr2 (54-128)||(2191392-2191466)
chr2 (83-129)||(7083792-7083838)
chr2 (30-127)||(7083525-7083622)
chr2 (79-135)||(7083690-7083746)
chr2 (13-69)||(10706624-10706680)
[»] scaffold0063 (2 HSPs)
scaffold0063 (13-128)||(34794-34909)
scaffold0063 (20-129)||(35172-35281)
[»] chr6 (9 HSPs)
chr6 (19-130)||(5974011-5974122)
chr6 (41-130)||(8710341-8710430)
chr6 (22-130)||(1869451-1869559)
chr6 (14-128)||(25932359-25932476)
chr6 (41-130)||(211441-211530)
chr6 (13-69)||(21113090-21113146)
chr6 (21-135)||(4510183-4510298)
chr6 (13-129)||(14712979-14713095)
chr6 (50-130)||(19595659-19595739)
[»] chr3 (20 HSPs)
chr3 (22-135)||(44504368-44504481)
chr3 (13-130)||(22814296-22814413)
chr3 (15-130)||(51471335-51471450)
chr3 (15-135)||(9218489-9218608)
chr3 (22-137)||(25770314-25770429)
chr3 (19-133)||(13637759-13637873)
chr3 (19-127)||(37172084-37172192)
chr3 (13-128)||(38485699-38485813)
chr3 (19-130)||(43933440-43933551)
chr3 (13-137)||(4199446-4199569)
chr3 (18-70)||(27013469-27013521)
chr3 (14-130)||(34743444-34743560)
chr3 (43-130)||(132062-132149)
chr3 (19-122)||(44504100-44504203)
chr3 (13-131)||(50732224-50732342)
chr3 (13-131)||(50780513-50780631)
chr3 (100-138)||(22814641-22814679)
chr3 (14-130)||(20831075-20831191)
chr3 (104-132)||(50002057-50002085)
chr3 (29-69)||(51755903-51755943)
[»] chr7 (19 HSPs)
chr7 (22-130)||(28854677-28854785)
chr7 (38-133)||(30938592-30938687)
chr7 (21-130)||(18152756-18152865)
chr7 (19-128)||(20544290-20544398)
chr7 (20-136)||(10466759-10466875)
chr7 (19-130)||(17075219-17075330)
chr7 (15-130)||(28852693-28852808)
chr7 (16-122)||(22948854-22948960)
chr7 (19-129)||(44803611-44803721)
chr7 (51-135)||(28838520-28838604)
chr7 (19-130)||(17075596-17075707)
chr7 (26-135)||(16755619-16755727)
chr7 (16-69)||(32092505-32092558)
chr7 (18-130)||(32092228-32092340)
chr7 (15-70)||(11975038-11975093)
chr7 (19-69)||(28838413-28838463)
chr7 (13-130)||(20543911-20544028)
chr7 (14-130)||(4152720-4152836)
chr7 (99-130)||(23548054-23548085)
[»] scaffold0148 (2 HSPs)
scaffold0148 (14-130)||(32968-33084)
scaffold0148 (14-130)||(29274-29390)


Alignment Details
Target: chr8 (Bit Score: 141; Significance: 9e-74; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 301 - 441
Target Start/End: Complemental strand, 44000560 - 44000420
Alignment:
Q  301 ttaagaaaaatggatatatttagcaaattacatttatgtctttgtgagtaatattactttgcccttccccgataaaacacaagtgccgacatttaaatta 400  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44000560 ttaagaaaaatggatatatttagcaaattacatttatgtctttgtgagtaatattactttgcccttccccgataaaacacaagtgccgacatttaaatta 44000461  T
Q  401 agagaagacacaaaattaaactgcatttgtatggttttaaa 441  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  44000460 agagaagacacaaaattaaactgcatttgtatggttttaaa 44000420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 13 - 130
Target Start/End: Complemental strand, 9800156 - 9800039
Alignment:
Q  13 agcagagactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataagga 112  Q
    |||| ||||||||| ||||||||||||  ||||||| ||||||||| ||||||||||| ||| || ||||||||||| |||  |  ||||||| ||||||    
T  9800156 agcaaagactaattttgataacggagatgaaatgtgaggattttaaaaacatttaataaaatgtaaggattattcttcaaagaggcgcaaaatctaagga 9800057  T
Q  113 ctaaaaacatatttaacc 130  Q
    ||||||||||||||||||    
T  9800056 ctaaaaacatatttaacc 9800039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 13 - 130
Target Start/End: Original strand, 26997842 - 26997959
Alignment:
Q  13 agcagagactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataagga 112  Q
    ||||| |||||||| |||||||||||| |||||||| ||||||||| || | |||||  ||| |||||| ||||||| |||  || ||||||| |||| |    
T  26997842 agcagggactaattttgataacggagataaaatgtgaggattttaaaaataattaatgaaatgtatggactattcttcaaatggacgcaaaatgtaagaa 26997941  T
Q  113 ctaaaaacatatttaacc 130  Q
    ||||||||||||||||||    
T  26997942 ctaaaaacatatttaacc 26997959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 19 - 130
Target Start/End: Complemental strand, 17914308 - 17914197
Alignment:
Q  19 gactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaa 118  Q
    |||||||| ||||||| |||| |||||||| ||||||||| ||||||||||| ||| || ||| ||||||| |||  || ||||||| ||| |||| |||    
T  17914308 gactaattttgataacagagataaaatgtgaggattttaaaaacatttaataaaatgtagggactattcttcaaagagacgcaaaatgtaaagacttaaa 17914209  T
Q  119 acatatttaacc 130  Q
    ||||||||||||    
T  17914208 acatatttaacc 17914197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 21 - 130
Target Start/End: Complemental strand, 13315311 - 13315202
Alignment:
Q  21 ctaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaaac 120  Q
    |||||| ||||||| |||| ||||||||  |||||||| ||||||||||  ||| || ||| |||||||||||  |  ||||||| ||||||||||||||    
T  13315311 ctaattttgataacagagataaaatgtgatgattttaaaaacatttaatgaaatgtagggactattctttaaatgggcgcaaaatgtaaggactaaaaac 13315212  T
Q  121 atatttaacc 130  Q
    ||||||||||    
T  13315211 atatttaacc 13315202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 19 - 130
Target Start/End: Complemental strand, 10047589 - 10047479
Alignment:
Q  19 gactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaa 118  Q
    |||||||| |||||||||||| |||||||| | ||||||| ||||||||||  ||| || ||| ||||||| |||| |  ||||||| |||||| |||||    
T  10047589 gactaattttgataacggagataaaatgtgagaattttaaaaacatttaat-gaatgtagggactattcttcaaaagggcgcaaaatgtaaggattaaaa 10047491  T
Q  119 acatatttaacc 130  Q
    ||||||||||||    
T  10047490 acatatttaacc 10047479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 19 - 123
Target Start/End: Original strand, 6297841 - 6297945
Alignment:
Q  19 gactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaa 118  Q
    |||||||| |||||||||||| |||||||| ||||||||| ||||||||||  ||| || ||| ||||||| ||| | | ||||||| || |||| ||||    
T  6297841 gactaattttgataacggagataaaatgtgaggattttaaaaacatttaatgaaatgtaaggactattcttcaaagtcacgcaaaatgtagggacgaaaa 6297940  T
Q  119 acata 123  Q
    |||||    
T  6297941 acata 6297945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 22 - 130
Target Start/End: Original strand, 7344838 - 7344946
Alignment:
Q  22 taattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaaaca 121  Q
    ||||| |||||||||| | ||||| || ||||||||| ||||| ||||| ||| |||||||||||||| |||  |   |||||| |||||||||||||||    
T  7344838 taattttgataacggacataaaatatgaggattttaaaaacatataataaaatgtatggattattcttcaaaggggcacaaaatgtaaggactaaaaaca 7344937  T
Q  122 tatttaacc 130  Q
    ||| |||||    
T  7344938 tatataacc 7344946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 23 - 127
Target Start/End: Original strand, 26243378 - 26243482
Alignment:
Q  23 aattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaaacat 122  Q
    |||| |||||| ||||| |||||||| ||||||||| ||||||||||  ||||||  || ||||||| |||     ||||||||||||||||||||||||    
T  26243378 aattttgataatggagataaaatgtgaggattttaaaaacatttaatgaaatatagagactattcttcaaaggagcgcaaaatataaggactaaaaacat 26243477  T
Q  123 attta 127  Q
    |||||    
T  26243478 attta 26243482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 19 - 129
Target Start/End: Complemental strand, 6297573 - 6297463
Alignment:
Q  19 gactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaa 118  Q
    |||||||| ||||||| |||| |||||||| ||||||||| ||||||||||  ||| || | | ||||||| |||  |  ||||||| |||||||||||     
T  6297573 gactaattttgataacagagagaaaatgtgaggattttaaaaacatttaatgaaatgtaggaactattcttcaaaggggcgcaaaatgtaaggactaaag 6297474  T
Q  119 acatatttaac 129  Q
    |||||||||||    
T  6297473 acatatttaac 6297463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 13 - 130
Target Start/End: Original strand, 17915480 - 17915596
Alignment:
Q  13 agcagagactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataagga 112  Q
    |||| ||||||||| ||||||| |||| |||||||| |||||| || ||||||||||| ||| || ||| ||||||| |||      |||||| ||||||    
T  17915480 agcaaagactaattttgataacagagataaaatgtgaggatttaaaaaacatttaataaaatgtaagga-tattcttcaaaggagcacaaaatgtaagga 17915578  T
Q  113 ctaaaaacatatttaacc 130  Q
    ||||||||||||||||||    
T  17915579 ctaaaaacatatttaacc 17915596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 39 - 130
Target Start/End: Complemental strand, 4624624 - 4624533
Alignment:
Q  39 aaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaaacatatttaacc 130  Q
    |||||||||  ||||||||| |||||||| |  ||| ||  || ||||||| ||| | ||||||||||||||||| ||||||||||||||||    
T  4624624 aaaaaatgtagggattttaaaaacatttattgaaatgtaaagactattcttcaaagtcatgcaaaatataaggaccaaaaacatatttaacc 4624533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 30 - 132
Target Start/End: Original strand, 12489517 - 12489618
Alignment:
Q  30 ataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaaacatatttaac 129  Q
    ||||| |||| |||||||  ||||||||| |||||| |||  ||| || ||| ||||||| | || || ||||||| |||||||||||||||||||||||    
T  12489517 ataacagagataaaatgtaaggattttaaaaacatt-aatgaaatgtaaggactattcttcataacgacgcaaaatgtaaggactaaaaacatatttaac 12489615  T
Q  130 cat 132  Q
    |||    
T  12489616 cat 12489618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 129
Target Start/End: Complemental strand, 44148688 - 44148578
Alignment:
Q  19 gactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaa 118  Q
    ||||| || ||||||||||| ||||||||| ||||||||| ||| |||| || ||| || ||| ||||||| ||||    | ||||| || |||||||||    
T  44148688 gactatttttgataacggagtaaaaatgtgaggattttaaaaacgtttattaaaatgtagggactattcttcaaaagagcgtaaaatgtagggactaaaa 44148589  T
Q  119 acatatttaac 129  Q
    |||||||||||    
T  44148588 acatatttaac 44148578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 23 - 70
Target Start/End: Original strand, 21006105 - 21006152
Alignment:
Q  23 aattatgataacggagaaaaaatgtgtggattttaagaacatttaata 70  Q
    |||| |||||||||||| |||||||| ||||||||| |||||||||||    
T  21006105 aattttgataacggagataaaatgtgaggattttaaaaacatttaata 21006152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 31 - 130
Target Start/End: Original strand, 29917529 - 29917627
Alignment:
Q  31 taacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaaacatatttaacc 130  Q
    |||||||||||||||||  ||||||||| |||||||| |  ||| || ||| ||||| | |||||  |||||||| || |||| ||||||||||||||||    
T  29917529 taacggagaaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattc-tcaaaatcgtgcaaaatgtagggaccaaaaacatatttaacc 29917627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 125
Target Start/End: Complemental strand, 44024336 - 44024230
Alignment:
Q  19 gactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatga-tgcaaaatataaggactaaa 117  Q
    |||||||| ||||||||| || ||||||||  |||||||| |||||||  |  ||| |||||| ||||||| ||| ||| |||||||| |||||||||||    
T  44024336 gactaattttgataacggggataaaatgtgatgattttaaaaacatttggtgaaatgtatggactattcttcaaa-tgagtgcaaaatttaaggactaaa 44024238  T
Q  118 aacatatt 125  Q
    || |||||    
T  44024237 aatatatt 44024230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 101 - 137
Target Start/End: Original strand, 4694493 - 4694529
Alignment:
Q  101 aaaatataaggactaaaaacatatttaaccataaatt 137  Q
    |||||||| ||||||||||||||||||||| ||||||    
T  4694493 aaaatatagggactaaaaacatatttaaccctaaatt 4694529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 67; Significance: 1e-29; HSPs: 27)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 16 - 130
Target Start/End: Complemental strand, 29691639 - 29691525
Alignment:
Q  16 agagactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggacta 115  Q
    ||||||||||| |||||||||||| |||||||| ||||||||| ||||||||||  ||| || ||| ||||||| |||  ||||||||||||||||||||    
T  29691639 agagactaattttgataacggagataaaatgtgaggattttaaaaacatttaatgaaatgtagggactattcttcaaatggatgcaaaatataaggacta 29691540  T
Q  116 aaaacatatttaacc 130  Q
    |||||||||||||||    
T  29691539 aaaacatatttaacc 29691525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 19 - 129
Target Start/End: Complemental strand, 3296654 - 3296544
Alignment:
Q  19 gactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaa 118  Q
    |||||||| |||||||||||| |||||||| ||||||||| ||||||||||  ||| || ||| ||||||| |||  |  ||||||| ||||||||||||    
T  3296654 gactaattttgataacggagataaaatgtgaggattttaaaaacatttaatgaaatgtagggaatattcttcaaaggggcgcaaaatgtaaggactaaaa 3296555  T
Q  119 acatatttaac 129  Q
    |||||||||||    
T  3296554 acatatttaac 3296544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 19 - 130
Target Start/End: Complemental strand, 48554007 - 48553896
Alignment:
Q  19 gactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaa 118  Q
    |||||||| |||||||||||| |||||||| ||||||||| ||  ||||||  ||| |||||| ||||||| |||  || ||||||| ||||||||||||    
T  48554007 gactaattttgataacggagataaaatgtgaggattttaaaaaggtttaatgaaatgtatggactattcttcaaagggacgcaaaatgtaaggactaaaa 48553908  T
Q  119 acatatttaacc 130  Q
    || |||||||||    
T  48553907 acgtatttaacc 48553896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 19 - 137
Target Start/End: Original strand, 30608612 - 30608730
Alignment:
Q  19 gactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaa 118  Q
    |||||||| |||||||||||| |||||||| ||||||||| ||||||||||  ||||||  || ||||||| |||  |   |||||| ||||| ||||||    
T  30608612 gactaattttgataacggagataaaatgtgaggattttaaaaacatttaatgaaatatagagactattcttcaaagaggcacaaaatgtaaggtctaaaa 30608711  T
Q  119 acatatttaaccataaatt 137  Q
    |||||||||||| ||||||    
T  30608712 acatatttaaccctaaatt 30608730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 13 - 130
Target Start/End: Original strand, 51906792 - 51906909
Alignment:
Q  13 agcagagactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataagga 112  Q
    |||||| ||||||| |||||||||||| |||||||| ||||||||| ||||||||||   || || ||| ||||||| |||     ||||||| ||||||    
T  51906792 agcagaaactaattttgataacggagataaaatgtgaggattttaaaaacatttaatgagatgtagggactattcttcaaaggagcgcaaaatgtaagga 51906891  T
Q  113 ctaaaaacatatttaacc 130  Q
    ||||||||||||||||||    
T  51906892 ctaaaaacatatttaacc 51906909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 19 - 130
Target Start/End: Original strand, 7118143 - 7118254
Alignment:
Q  19 gactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaa 118  Q
    |||||||| |||||| ||||| ||||| || | ||||||| ||||||||||  ||| |||||| ||||||| |||  |  ||||||| ||||||||||||    
T  7118143 gactaattttgataatggagataaaatttgagaattttaaaaacatttaatgaaatgtatggactattcttcaaaggggcgcaaaatgtaaggactaaaa 7118242  T
Q  119 acatatttaacc 130  Q
    ||||||||||||    
T  7118243 acatatttaacc 7118254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 19 - 129
Target Start/End: Original strand, 34129279 - 34129389
Alignment:
Q  19 gactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaa 118  Q
    |||||||| ||||||| |||| |||||||| ||||||||| || |||||||  ||| || ||| ||||||| ||| || |||||||| ||||| || |||    
T  34129279 gactaattttgataacagagataaaatgtgaggattttaaaaatatttaatgaaatgtagggactattcttcaaattggtgcaaaatgtaagggctgaaa 34129378  T
Q  119 acatatttaac 129  Q
    |||||||||||    
T  34129379 acatatttaac 34129389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 13 - 130
Target Start/End: Original strand, 35166839 - 35166956
Alignment:
Q  13 agcagagactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataagga 112  Q
    |||||||||||||| |||||||||||| |||||||| ||||||||| ||||||||||  |||    |||||||| ||  ||  || ||||||| |||| |    
T  35166839 agcagagactaattttgataacggagataaaatgtgaggattttaaaaacatttaatgaaatgctgggattatttttcgaagggacgcaaaatgtaagca 35166938  T
Q  113 ctaaaaacatatttaacc 130  Q
    ||||| ||||||||||||    
T  35166939 ctaaagacatatttaacc 35166956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 13 - 105
Target Start/End: Complemental strand, 30608362 - 30608270
Alignment:
Q  13 agcagagactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaat 105  Q
    |||||||||||||| |||||||||||| |||||||| ||||||||| || || ||||  ||| || ||| ||||||| ||||||| |||||||    
T  30608362 agcagagactaattttgataacggagataaaatgtgaggattttaaaaatatataatgaaatgtagggactattcttcaaaatgacgcaaaat 30608270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 19 - 135
Target Start/End: Complemental strand, 51906531 - 51906415
Alignment:
Q  19 gactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaa 118  Q
    |||||||| |||||||||||| |||||||| |||| |||| ||||||||||  ||  || ||| ||||||| |||  |  ||||||| ||| ||||||||    
T  51906531 gactaattttgataacggagataaaatgtgaggatattaaaaacatttaatgaaacgtagggactattcttcaaagaggcgcaaaatgtaaagactaaaa 51906432  T
Q  119 acatatttaaccataaa 135  Q
    |||||||||||| ||||    
T  51906431 acatatttaaccctaaa 51906415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 19 - 130
Target Start/End: Original strand, 3296923 - 3297034
Alignment:
Q  19 gactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaa 118  Q
    |||||||| |||||||||||| |||||||  ||||||||| ||||||||||  ||  || ||| ||||||| |||  |  ||||||| ||||||||||||    
T  3296923 gactaattttgataacggagataaaatgtaaggattttaaaaacatttaatgaaacgtagggactattcttcaaagggtcgcaaaatgtaaggactaaaa 3297022  T
Q  119 acatatttaacc 130  Q
    | ||||||||||    
T  3297023 atatatttaacc 3297034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 31 - 130
Target Start/End: Original strand, 54143492 - 54143591
Alignment:
Q  31 taacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaaacatatttaacc 130  Q
    ||||||||| |||||||  ||||||||| |||||||| || ||| || ||| ||||||| ||| |  ||||||||||| ||||||| |||||||||||||    
T  54143492 taacggagagaaaatgtaaggattttaaaaacatttattaaaatgtagggactattcttcaaagtcgtgcaaaatatagggactaataacatatttaacc 54143591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 31 - 130
Target Start/End: Complemental strand, 54167593 - 54167494
Alignment:
Q  31 taacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaaacatatttaacc 130  Q
    |||||||| ||||||||  ||||||||| |||||||| |  |||||| ||| ||||||| ||||| | ||||||| || ||||| |||||||||||||||    
T  54167593 taacggagtaaaaatgtagggattttaaaaacatttattgaaatataaggactattcttgaaaatcacgcaaaatgtagggacttaaaacatatttaacc 54167494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 13 - 119
Target Start/End: Complemental strand, 26168109 - 26168004
Alignment:
Q  13 agcagagactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataagga 112  Q
    |||||||||||||| |||||||||||| |||||||| ||||||||| || |||||||| ||| ||   | |||||||||||| |  ||||||| ||| ||    
T  26168109 agcagagactaattttgataacggagataaaatgtgaggattttaaaaatatttaata-aatgtagaaactattctttaaaagggcgcaaaatgtaatga 26168011  T
Q  113 ctaaaaa 119  Q
    |||||||    
T  26168010 ctaaaaa 26168004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 28 - 130
Target Start/End: Complemental strand, 38759806 - 38759704
Alignment:
Q  28 tgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaaacatattta 127  Q
    |||||||||||| ||||| || ||||||||| ||||||||||  ||| ||| || ||||||| |||  |  ||||||| ||||||||||||| |||||||    
T  38759806 tgataacggagataaaatttgaggattttaaaaacatttaatgaaatgtatagactattcttcaaagaggcgcaaaatttaaggactaaaaaaatattta 38759707  T
Q  128 acc 130  Q
    |||    
T  38759706 acc 38759704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 22 - 130
Target Start/End: Original strand, 48760097 - 48760205
Alignment:
Q  22 taattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaaaca 121  Q
    ||||| ||||||| |||| ||||||||  |||||||| ||||||||||  | | || | | ||||||| |||| || ||| |||||||| ||||||||||    
T  48760097 taattttgataacagagataaaatgtgaagattttaaaaacatttaatgaattgtacgaactattcttcaaaaagacgcacaatataagaactaaaaaca 48760196  T
Q  122 tatttaacc 130  Q
    |||||||||    
T  48760197 tatttaacc 48760205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 19 - 126
Target Start/End: Original strand, 56106440 - 56106547
Alignment:
Q  19 gactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaa 118  Q
    |||||||| | |||||||||| |||||| | ||||||||| ||||||||||| |||||| | | ||||||| |||  |   |||||| ||| ||||||||    
T  56106440 gactaattttaataacggagataaaatgagaggattttaaaaacatttaataaaatataggaactattcttcaaaggggcacaaaatgtaaagactaaaa 56106539  T
Q  119 acatattt 126  Q
    ||||||||    
T  56106540 acatattt 56106547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 40 - 130
Target Start/End: Original strand, 54168823 - 54168913
Alignment:
Q  40 aaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaaacatatttaacc 130  Q
    ||||||||  ||||||||| || ||||| || ||| || ||||||||||| ||| | | |||||||||| ||| |||||||||||||||||    
T  54168823 aaaaatgtagggattttaaaaatatttattaaaatgtagggattattcttcaaagtcacgcaaaatatagggattaaaaacatatttaacc 54168913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 31 - 132
Target Start/End: Complemental strand, 54142424 - 54142323
Alignment:
Q  31 taacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaaacatatttaacc 130  Q
    ||||||||| |||||||  ||||||||| |||||||| |  ||| |||||| ||||||| ||| |   ||||||| || ||||||| |||||||||||||    
T  54142424 taacggagagaaaatgtaaggattttaaaaacatttattgaaatgtatggactattcttcaaagtcgcgcaaaatgtagggactaataacatatttaacc 54142325  T
Q  131 at 132  Q
    ||    
T  54142324 at 54142323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 130
Target Start/End: Original strand, 47058481 - 47058597
Alignment:
Q  14 gcagagactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggac 113  Q
    |||| ||||| || || ||||||| |||||||||  ||||||||| |||||||| |  ||| ||  || ||||  ||||||||| ||||||| || ||||    
T  47058481 gcagggactatttgtgctaacggataaaaaatgtagggattttaaaaacatttattgaaatgtaaagactattaattaaaatgaggcaaaatgtagggac 47058580  T
Q  114 taaaaacatatttaacc 130  Q
     ||||||||||||||||    
T  47058581 caaaaacatatttaacc 47058597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 70
Target Start/End: Original strand, 1791521 - 1791578
Alignment:
Q  13 agcagagactaattatgataacggagaaaaaatgtgtggattttaagaacatttaata 70  Q
    |||||||||||||| | |||||||||| |||||||   |||||||| |||||||||||    
T  1791521 agcagagactaattttaataacggagataaaatgtaaagattttaaaaacatttaata 1791578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 122
Target Start/End: Complemental strand, 26984245 - 26984152
Alignment:
Q  29 gataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaaacat 122  Q
    |||||| |||| |||||||| ||||||||| ||||||||||| | | || ||| ||||||| |||  |  |||||||||||  |||||||||||    
T  26984245 gataactgagataaaatgtgaggattttaaaaacatttaataaagtctagggactattcttcaaagaggcgcaaaatataaaaactaaaaacat 26984152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 130
Target Start/End: Complemental strand, 28505325 - 28505209
Alignment:
Q  13 agcagagactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataagga 112  Q
    ||||| ||||| ||| | |||||||| ||||||||  ||||||||| |||||||| |  ||| || ||| ||||||  |||||  |||||||| || |||    
T  28505325 agcagggactatttacgctaacggaggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattctc-aaaatcgtgcaaaatgtaggga 28505227  T
Q  113 ctaaaaacatatttaacc 130  Q
    | ||||||||||||||||    
T  28505226 ccaaaaacatatttaacc 28505209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 135
Target Start/End: Complemental strand, 789993 - 789890
Alignment:
Q  31 taacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaaacatatttaacc 130  Q
    |||||||||||||||||  ||||||||| |||||| | |  ||| |||||| |||| || |||||   ||||||| || |||| ||||||||||||||||    
T  789993 taacggagaaaaaatgtagggattttaaaaacattcattgaaatgtatggactatt-ttcaaaattgcgcaaaatgtagggaccaaaaacatatttaacc 789895  T
Q  131 ataaa 135  Q
     ||||    
T  789894 ctaaa 789890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 83 - 135
Target Start/End: Original strand, 3296814 - 3296866
Alignment:
Q  83 tattctttaaaatgatgcaaaatataaggactaaaaacatatttaaccataaa 135  Q
    ||||||||||| | | |||||||||| |||| |||||||||||||||| ||||    
T  3296814 tattctttaaagtcacgcaaaatatatggaccaaaaacatatttaaccttaaa 3296866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 18 - 130
Target Start/End: Complemental strand, 34129106 - 34128994
Alignment:
Q  18 agactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaa 117  Q
    ||||||| | |||||||| ||| ||||| || | ||||||| ||| ||||||| |||||| ||| ||||||| |||  || ||||||| |||  | || |    
T  34129106 agactaactttgataacgaagataaaatatgagaattttaaaaacgtttaataaaatatagggactattcttcaaagggacgcaaaatgtaattattaga 34129007  T
Q  118 aacatatttaacc 130  Q
    |||||||||||||    
T  34129006 aacatatttaacc 34128994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 14 - 130
Target Start/End: Complemental strand, 47053877 - 47053761
Alignment:
Q  14 gcagagactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggac 113  Q
    |||| ||||| || || |||||||  ||||||||  ||||||||| |||||||| |  ||| || ||| ||||  ||||||||| ||||||| || ||||    
T  47053877 gcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtagggac 47053778  T
Q  114 taaaaacatatttaacc 130  Q
     || |||||||||||||    
T  47053777 caataacatatttaacc 47053761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 13 - 137
Target Start/End: Original strand, 108095 - 108219
Alignment:
Q  13 agcagagactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataagga 112  Q
    |||||||||||||| |||||||||||| |||||||| ||||||||| ||||||||||  ||| || | || |||||| |||| |  ||||||| ||||||    
T  108095 agcagagactaattttgataacggagataaaatgtgaggattttaaaaacatttaatgaaatgtaggaataattcttcaaaagggcgcaaaatgtaagga 108194  T
Q  113 ctaaaaacatatttaaccataaatt 137  Q
    |||||||||||||||| | ||||||    
T  108195 ctaaaaacatatttaatcctaaatt 108219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 56; Significance: 5e-23; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 18 - 129
Target Start/End: Original strand, 87239 - 87350
Alignment:
Q  18 agactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaa 117  Q
    ||||||||| |||||||||||| |||||||| ||||||||| ||||||||||  ||| || ||| ||||||| |||  ||  ||||||||||||||||||    
T  87239 agactaattttgataacggagataaaatgtgaggattttaaaaacatttaatgaaatgtagggactattcttcaaagggacacaaaatataaggactaaa 87338  T
Q  118 aacatatttaac 129  Q
    ||||||||||||    
T  87339 aacatatttaac 87350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 19 - 129
Target Start/End: Complemental strand, 16284385 - 16284275
Alignment:
Q  19 gactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaa 118  Q
    |||||||| |||||||||||| ||||| || ||||||||| ||||||||||| ||||||  || ||||||| ||||  | ||||||| ||||||||||||    
T  16284385 gactaattttgataacggagataaaatatgaggattttaaaaacatttaataaaatataaagactattcttcaaaaaaacgcaaaatgtaaggactaaaa 16284286  T
Q  119 acatatttaac 129  Q
    |||||||||||    
T  16284285 acatatttaac 16284275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 22 - 130
Target Start/End: Original strand, 18999622 - 18999730
Alignment:
Q  22 taattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaaaca 121  Q
    ||||| |||||||  ||| |||||||| ||||||||| || |||||||  ||| |||||| ||||||| ||||||| ||||||| |||||||||||||||    
T  18999622 taattttgataacaaagataaaatgtgaggattttaaaaatatttaatgaaatgtatggactattcttcaaaatgaagcaaaatgtaaggactaaaaaca 18999721  T
Q  122 tatttaacc 130  Q
    |||||||||    
T  18999722 tatttaacc 18999730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 19 - 130
Target Start/End: Complemental strand, 18999477 - 18999366
Alignment:
Q  19 gactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaa 118  Q
    |||||||| |||||||||||| |||||| | ||||||||| || |||||||  ||| |||||| ||||||| ||||   |||||||| ||||||||||||    
T  18999477 gactaattttgataacggagataaaatgagaggattttaaaaatatttaatgaaatgtatggactattcttcaaaagagtgcaaaatgtaaggactaaaa 18999378  T
Q  119 acatatttaacc 130  Q
    ||||||||||||    
T  18999377 acatatttaacc 18999366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 18 - 132
Target Start/End: Original strand, 8648043 - 8648157
Alignment:
Q  18 agactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaa 117  Q
    ||||||||| ||||||||||||||||||||| ||||||||| || |||||||  ||| ||  || |||||||  ||| || ||||||| |||||||||||    
T  8648043 agactaattttgataacggagaaaaaatgtgaggattttaaaaatatttaatgaaatgtaaagactattcttccaaaggacgcaaaatgtaaggactaaa 8648142  T
Q  118 aacatatttaaccat 132  Q
    | |||||||||||||    
T  8648143 atcatatttaaccat 8648157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 19 - 130
Target Start/End: Complemental strand, 31176618 - 31176507
Alignment:
Q  19 gactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaa 118  Q
    |||||||| ||||||||| || ||||| ||  |||||||| ||||||||||  ||| |||||| | ||||| |||  || ||||||||||||||||||||    
T  31176618 gactaattttgataacggggataaaatatgacgattttaaaaacatttaatgaaatgtatggactgttcttcaaagggacgcaaaatataaggactaaaa 31176519  T
Q  119 acatatttaacc 130  Q
    ||||||||||||    
T  31176518 acatatttaacc 31176507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 19 - 129
Target Start/End: Original strand, 8750339 - 8750449
Alignment:
Q  19 gactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaa 118  Q
    |||||||| |||||||||||| ||||| || |||||||||  |||||||||| ||| || ||| ||||||| |||   | ||||||| ||||||||||||    
T  8750339 gactaattttgataacggagataaaatatgaggattttaaacacatttaataaaatgtagggactattcttcaaagaaacgcaaaatgtaaggactaaaa 8750438  T
Q  119 acatatttaac 129  Q
    |||||||||||    
T  8750439 acatatttaac 8750449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 13 - 130
Target Start/End: Original strand, 31588319 - 31588437
Alignment:
Q  13 agcagagactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaa-atgatgcaaaatataagg 111  Q
    ||||| |||||||| |||||||||||| |||||||  ||||||||| || |||||||  ||| || ||| ||||||| |||   || ||||||| |||||    
T  31588319 agcagggactaattttgataacggagataaaatgttaggattttaaaaatatttaatgaaatgtagggactattcttcaaaggggacgcaaaatgtaagg 31588418  T
Q  112 actaaaaacatatttaacc 130  Q
    |||||||||||||||||||    
T  31588419 actaaaaacatatttaacc 31588437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 13 - 128
Target Start/End: Complemental strand, 13987400 - 13987284
Alignment:
Q  13 agcagagactaattatgataacggagaaaaaatgtgtggatttt-aagaacatttaatataatatatggattattctttaaaatgatgcaaaatataagg 111  Q
    |||||||||||||| | |||||||||| |||||||| | ||||| || ||||||||||  ||||||  |||||||||| |||| |  || |||| ||||     
T  13987400 agcagagactaattttaataacggagataaaatgtgagaattttaaaaaacatttaatgaaatatagagattattcttcaaaagggcgcgaaatgtaaga 13987301  T
Q  112 actaaaaacatatttaa 128  Q
    |||||||||||||||||    
T  13987300 actaaaaacatatttaa 13987284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 50 - 130
Target Start/End: Original strand, 22231170 - 22231250
Alignment:
Q  50 ggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaaacatatttaacc 130  Q
    |||||| || ||||||||||  |||||| ||| |||||||||||  |  ||||||||||||||||||||||||||||||||    
T  22231170 ggatttcaaaaacatttaatgaaatatagggactattctttaaaggggcgcaaaatataaggactaaaaacatatttaacc 22231250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 17 - 130
Target Start/End: Complemental strand, 14625234 - 14625122
Alignment:
Q  17 gagactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaa 116  Q
    ||||||| |||||||||||||| ||||||||  ||||||||| |||||||| || ||| |||||| || | ||||||||   | ||||| || |||| ||    
T  14625234 gagactatttatgataacggaggaaaaatgtagggattttaaaaacatttattaaaatttatggacta-tatttaaaattgcgtaaaatgtagggaccaa 14625136  T
Q  117 aaacatatttaacc 130  Q
    ||||||||||||||    
T  14625135 aaacatatttaacc 14625122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 19 - 130
Target Start/End: Original strand, 3406839 - 3406949
Alignment:
Q  19 gactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaa 118  Q
    |||||||| ||||||| |||| |||||||| | ||||||| || |||||||| |||||  | | ||||||| |||| |  |||||||||||  |||||||    
T  3406839 gactaattttgataacagagataaaatgtgagaattttaaaaatatttaataaaatattggaactattcttcaaaaaggcgcaaaatataa-aactaaaa 3406937  T
Q  119 acatatttaacc 130  Q
    ||||||||||||    
T  3406938 acatatttaacc 3406949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 13 - 130
Target Start/End: Complemental strand, 3191914 - 3191798
Alignment:
Q  13 agcagagactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataagga 112  Q
    ||||| ||||| ||| | |||||||| ||||||||  ||||||||| |||||||| |  ||| || ||| ||||||  |||||  |||||||| || |||    
T  3191914 agcagggactatttacgctaacggaggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattctc-aaaatcgtgcaaaatgtaggga 3191816  T
Q  113 ctaaaaacatatttaacc 130  Q
    ||||||||||||||||||    
T  3191815 ctaaaaacatatttaacc 3191798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 50 - 130
Target Start/End: Complemental strand, 119264 - 119184
Alignment:
Q  50 ggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaaacatatttaacc 130  Q
    ||||||||| |||||||| |  ||| || ||| ||||||||||| | | ||||||| ||||||| ||||||||||||||||    
T  119264 ggattttaaaaacatttattgaaatgtaaggactattctttaaagtcacgcaaaatctaaggaccaaaaacatatttaacc 119184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 70
Target Start/End: Complemental strand, 3935505 - 3935450
Alignment:
Q  15 cagagactaattatgataacggagaaaaaatgtgtggattttaagaacatttaata 70  Q
    |||||||||||  |||||| ||||| |||||||| ||||||||| |||||||||||    
T  3935505 cagagactaatattgataatggagataaaatgtgaggattttaaaaacatttaata 3935450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 25 - 136
Target Start/End: Original strand, 14626074 - 14626185
Alignment:
Q  25 ttatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaaacatat 124  Q
    |||||||||| || |||||||||  ||||||||| |||||||| |  ||| || ||| |||| |||||| |   ||||| |||| |||| ||||||||||    
T  14626074 ttatgataacagataaaaaatgtagggattttaaaaacatttattgaaatgtagggactattttttaaagtcgcgcaaagtatagggaccaaaaacatat 14626173  T
Q  125 ttaaccataaat 136  Q
    ||||||| ||||    
T  14626174 ttaaccaaaaat 14626185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 16 - 142
Target Start/End: Complemental strand, 8750124 - 8749998
Alignment:
Q  16 agagactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggacta 115  Q
    ||||||||||| |||||||| ||| |||| ||   |||||||| || |||||||  ||| || |||||||| || |||  |  ||||||| |||| | ||    
T  8750124 agagactaattttgataacgaagataaaacgttacgattttaaaaatatttaatgaaatgtagggattattattcaaaggggcgcaaaatgtaagaatta 8750025  T
Q  116 aaaacatatttaaccataaattcaatc 142  Q
    ||||||||||||||| |||| ||||||    
T  8750024 aaaacatatttaaccctaaaatcaatc 8749998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 100 - 130
Target Start/End: Complemental strand, 15978419 - 15978389
Alignment:
Q  100 caaaatataaggactaaaaacatatttaacc 130  Q
    |||||||||||||||||||||||||||||||    
T  15978419 caaaatataaggactaaaaacatatttaacc 15978389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 54 - 135
Target Start/End: Original strand, 18339314 - 18339395
Alignment:
Q  54 tttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaaacatatttaaccataaa 135  Q
    ||||| |||||||| || ||| || ||||||||||| ||||| | | ||||| ||||||| ||||| |||||||||| ||||    
T  18339314 tttaaaaacatttattaaaatgtaaggattattcttcaaaataacgtaaaatgtaaggaccaaaaatatatttaaccctaaa 18339395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 42 - 130
Target Start/End: Complemental strand, 87107 - 87019
Alignment:
Q  42 aaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaaacatatttaacc 130  Q
    |||||||  |||||||| ||||||||||  ||| || || |||||||| | |   | ||||||||||| ||||||||||||||||||||    
T  87107 aaatgtgaagattttaaaaacatttaatgaaatgtaggggttattcttcagatgaacgcaaaatataaagactaaaaacatatttaacc 87019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 13 - 89
Target Start/End: Original strand, 3935667 - 3935743
Alignment:
Q  13 agcagagactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctt 89  Q
    |||||||||||||| | |||||  ||| |||||||| ||||||||| |||| |||||  ||| || |||||||||||    
T  3935667 agcagagactaattttaataacaaagataaaatgtgaggattttaaaaacaattaatgaaatgtagggattattctt 3935743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 105 - 133
Target Start/End: Original strand, 29959175 - 29959203
Alignment:
Q  105 tataaggactaaaaacatatttaaccata 133  Q
    |||||||||||||||||||||||||||||    
T  29959175 tataaggactaaaaacatatttaaccata 29959203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 65
Target Start/End: Original strand, 30415465 - 30415509
Alignment:
Q  21 ctaattatgataacggagaaaaaatgtgtggattttaagaacatt 65  Q
    |||||| |||||||||||| |||||||| ||||||||| ||||||    
T  30415465 ctaattttgataacggagacaaaatgtgaggattttaaaaacatt 30415509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 105 - 141
Target Start/End: Complemental strand, 34448519 - 34448483
Alignment:
Q  105 tataaggactaaaaacatatttaaccataaattcaat 141  Q
    |||||||||||||||||||||||||| |||| |||||    
T  34448519 tataaggactaaaaacatatttaaccctaaaatcaat 34448483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 56; Significance: 5e-23; HSPs: 23)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 19 - 130
Target Start/End: Original strand, 18180257 - 18180368
Alignment:
Q  19 gactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaa 118  Q
    |||||||| |||||||||||| ||||| || ||||||||| ||||||||||| ||| |||||| ||||||| ||| ||  ||||||||||| || |||||    
T  18180257 gactaattttgataacggagataaaatatgaggattttaaaaacatttaataaaatgtatggactattcttcaaagtggcgcaaaatataaagattaaaa 18180356  T
Q  119 acatatttaacc 130  Q
    ||||||||||||    
T  18180357 acatatttaacc 18180368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 13 - 130
Target Start/End: Original strand, 31436356 - 31436473
Alignment:
Q  13 agcagagactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataagga 112  Q
    |||||||||||||| |||||||||||| ||||||||   ||||||| ||||||||||| ||||||  || ||||||| |||| ||  |||||| ||||||    
T  31436356 agcagagactaattttgataacggagataaaatgtgataattttaaaaacatttaataaaatatagtgactattcttcaaaaggacacaaaatgtaagga 31436455  T
Q  113 ctaaaaacatatttaacc 130  Q
    |||||| |||||||||||    
T  31436456 ctaaaatcatatttaacc 31436473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 16 - 130
Target Start/End: Complemental strand, 18179993 - 18179879
Alignment:
Q  16 agagactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggacta 115  Q
    ||||||||||| |||||||||||| |||||||| ||||||||| |||| |||||  |||||| ||| |||| || |||  | |||||||| |||||||||    
T  18179993 agagactaattttgataacggagataaaatgtgaggattttaaaaacaattaatgaaatataaggactatttttcaaaggggtgcaaaatgtaaggacta 18179894  T
Q  116 aaaacatatttaacc 130  Q
    ||||||| |||||||    
T  18179893 aaaacatgtttaacc 18179879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 19 - 130
Target Start/End: Complemental strand, 9880595 - 9880484
Alignment:
Q  19 gactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaa 118  Q
    |||||||| |||||||| ||| |||||||| ||||||||| ||||||||||  ||| ||  || | ||||| |||  |||||||||| ||||||||||||    
T  9880595 gactaattttgataacgaagataaaatgtgaggattttaaaaacatttaatgaaatgtagagacttttcttcaaagggatgcaaaatgtaaggactaaaa 9880496  T
Q  119 acatatttaacc 130  Q
    ||||||||||||    
T  9880495 acatatttaacc 9880484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 13 - 130
Target Start/End: Original strand, 3591310 - 3591427
Alignment:
Q  13 agcagagactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatga-tgcaaaatataagg 111  Q
    ||||| |||||||| | |||| ||||| |||||||| ||||||||| ||||||||||| ||| |||||| ||||| || ||||||  ||||||| |||||    
T  3591310 agcagggactaatttttataatggagataaaatgtgaggattttaaaaacatttaataaaatgtatggactattc-ttcaaatgagcgcaaaatgtaagg 3591408  T
Q  112 actaaaaacatatttaacc 130  Q
    |||||||| ||||||||||    
T  3591409 actaaaaatatatttaacc 3591427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 13 - 130
Target Start/End: Original strand, 5683534 - 5683651
Alignment:
Q  13 agcagagactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataagga 112  Q
    ||||| |||||||| ||||| |||||| |||||  | ||||||||| || |||||||  ||| || ||| ||||||| |||| || | ||||||||||||    
T  5683534 agcagtgactaattttgataccggagataaaatacgaggattttaaaaatatttaatgaaatgtagggactattcttcaaaaagacgtaaaatataagga 5683633  T
Q  113 ctaaaaacatatttaacc 130  Q
    ||||||||||||||||||    
T  5683634 ctaaaaacatatttaacc 5683651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 13 - 130
Target Start/End: Original strand, 50359412 - 50359529
Alignment:
Q  13 agcagagactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataagga 112  Q
    |||||||||||||| ||||||| |||| |||||||| ||||||||| ||||||||||  |||| | ||| ||||||| |||  |  ||||||| ||||||    
T  50359412 agcagagactaattttgataacagagataaaatgtgaggattttaaaaacatttaatgaaataaaaggactattcttcaaatgggcgcaaaatgtaagga 50359511  T
Q  113 ctaaaaacatatttaacc 130  Q
     || ||||||||||||||    
T  50359512 atataaacatatttaacc 50359529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 12 - 132
Target Start/End: Complemental strand, 48155091 - 48154972
Alignment:
Q  12 gagcagagactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataagg 111  Q
    ||||||||| ||||| ||||| |||||| ||||| || ||||||||| ||||||||||| ||| || ||| ||||||| |||  |  | |||||||||||    
T  48155091 gagcagagattaattttgatatcggagataaaatatgaggattttaaaaacatttaataaaatgtaaggactattctt-aaagcggcgtaaaatataagg 48154993  T
Q  112 actaaaaacatatttaaccat 132  Q
    | |||||||||||||||||||    
T  48154992 attaaaaacatatttaaccat 48154972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 20 - 130
Target Start/End: Original strand, 42723235 - 42723349
Alignment:
Q  20 actaattatgataacggagaaaaaatgtgtggattttaagaacatttaata----taatatatggattattctttaaaatgatgcaaaatataaggacta 115  Q
    ||||||| || ||||||| | |||||||| ||||||||| |||||||||||     |||||||| |||||||||||||     |||||||||||||| ||    
T  42723235 actaattttgctaacggatataaaatgtgaggattttaaaaacatttaataaattaaatatatgaattattctttaaaggagcgcaaaatataaggatta 42723334  T
Q  116 aaaacatatttaacc 130  Q
    |||||||||||||||    
T  42723335 aaaacatatttaacc 42723349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 18 - 130
Target Start/End: Complemental strand, 19895512 - 19895400
Alignment:
Q  18 agactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaa 117  Q
    ||||||||| |||||||||||| |||||||| || |||||| ||||||||||  ||| |||||| ||||||| |||       ||||| |||||||||||    
T  19895512 agactaattttgataacggagataaaatgtgagggttttaaaaacatttaattaaatgtatggactattcttcaaacgagcataaaatgtaaggactaaa 19895413  T
Q  118 aacatatttaacc 130  Q
    |||||||||||||    
T  19895412 aacatatttaacc 19895400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 13 - 135
Target Start/End: Original strand, 9880763 - 9880885
Alignment:
Q  13 agcagagactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatga-tgcaaaatataagg 111  Q
    ||||| |||||||| ||||||| |||| |||||||| | ||||||| ||||||||||| ||||||   | ||||| || ||||||  ||||||| ||||     
T  9880763 agcagggactaattttgataacagagataaaatgtgagaattttaaaaacatttaataaaatatagaaactattc-ttcaaatgagcgcaaaatgtaaga 9880861  T
Q  112 actaaaaacatatttaaccataaa 135  Q
    | ||||||||||||||||||||||    
T  9880862 attaaaaacatatttaaccataaa 9880885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 13 - 130
Target Start/End: Original strand, 6751326 - 6751444
Alignment:
Q  13 agcagagactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatg-caaaatataagg 111  Q
    |||||||||||||| |||||||  ||| |||||||| ||||||||| || |||||||  ||| || ||| | |||||||||  || | |||||| ||| |    
T  6751326 agcagagactaattttgataacaaagataaaatgtgaggattttaaaaaaatttaatgaaatgtaaggacttttctttaaagggacgccaaaatgtaatg 6751425  T
Q  112 actaaaaacatatttaacc 130  Q
    |||||||||||||||||||    
T  6751426 actaaaaacatatttaacc 6751444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 40 - 137
Target Start/End: Original strand, 1500981 - 1501078
Alignment:
Q  40 aaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaaacatatttaaccataaatt 137  Q
    ||||||||  ||||||||| ||||||||||  ||| || ||| ||||||| ||||    |||||||||| ||||||||||||||||||||| ||||||    
T  1500981 aaaaatgtagggattttaaaaacatttaatgaaatgtagggactattcttcaaaagagcgcaaaatatagggactaaaaacatatttaaccctaaatt 1501078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 13 - 130
Target Start/End: Complemental strand, 5683278 - 5683161
Alignment:
Q  13 agcagagactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataagga 112  Q
    ||||| |||||||| |||||| | ||| |||||||| |||||||||  |||||||||  ||| || ||| |||| || |||  || ||||||| ||||||    
T  5683278 agcagggactaattttgataatgaagataaaatgtgaggattttaaatacatttaatgaaatgtagggactatttttcaaagagacgcaaaatgtaagga 5683179  T
Q  113 ctaaaaacatatttaacc 130  Q
     |||||||||||||||||    
T  5683178 ttaaaaacatatttaacc 5683161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 21 - 130
Target Start/End: Complemental strand, 50359234 - 50359125
Alignment:
Q  21 ctaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaaac 120  Q
    |||||| |||||||||| | ||||||||  ||||| || ||||||||||  ||| || ||| |||||||  || ||  |||||||||||||||||||||     
T  50359234 ctaattttgataacggaaataaaatgtgaagatttaaaaaacatttaatgaaatgtagggactattcttcgaattggcgcaaaatataaggactaaaaaa 50359135  T
Q  121 atatttaacc 130  Q
    ||||||||||    
T  50359134 atatttaacc 50359125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 31 - 130
Target Start/End: Complemental strand, 36792338 - 36792240
Alignment:
Q  31 taacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaaacatatttaacc 130  Q
    |||||||| ||||||||  ||||||||| |||||||| |  |||||| ||||||||||| ||||| | ||||||| || | ||| |||||||||||||||    
T  36792338 taacggagtaaaaatgtagggattttaa-aacatttattgaaatatagggattattcttgaaaatcacgcaaaatgtaggaacttaaaacatatttaacc 36792240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 31 - 130
Target Start/End: Original strand, 36793565 - 36793664
Alignment:
Q  31 taacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaaacatatttaacc 130  Q
    |||||||  ||||||||  ||||||||| |||||||| || ||| ||  || ||||||| ||| | | |||||||||| |||||||||||||||||||||    
T  36793565 taacggaataaaaatgtagggattttaaaaacatttattaaaatgtagagactattcttcaaagtcacgcaaaatatagggactaaaaacatatttaacc 36793664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 130
Target Start/End: Complemental strand, 45664801 - 45664687
Alignment:
Q  16 agagactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatga-tgcaaaatataaggact 114  Q
    |||||||| || ||||||||||| ||||||||| ||||||||| |||||||| || ||| ||  || ||||| || ||||||  | ||||| || |||||    
T  45664801 agagactatttttgataacggagtaaaaatgtggggattttaaaaacatttattaaaatgtagagactattc-ttcaaatgagcgtaaaatgtagggact 45664703  T
Q  115 aaaaacatatttaacc 130  Q
    ||||||||||||||||    
T  45664702 aaaaacatatttaacc 45664687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 22 - 132
Target Start/End: Original strand, 4288422 - 4288527
Alignment:
Q  22 taattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaaaca 121  Q
    ||||| |||||||| | | |||||||| ||||||||| |||||||||| ||      ||| ||||||| |||  |  |||||||||||||||||||||||    
T  4288422 taattttgataacgaatataaaatgtgaggattttaaaaacatttaatgtag-----ggactattcttcaaaggggcgcaaaatataaggactaaaaaca 4288516  T
Q  122 tatttaaccat 132  Q
    |||||||||||    
T  4288517 tatttaaccat 4288527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 128
Target Start/End: Complemental strand, 6751158 - 6751049
Alignment:
Q  19 gactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaa 118  Q
    |||||||| |||||||||||| |||||| |  |||||| | ||||||||||  |||||| ||||||||||| |||  |   |||||| ||| |||||||     
T  6751158 gactaattttgataacggagataaaatgcgatgatttttaaaacatttaatgaaatataaggattattcttcaaagaggcacaaaatgtaaagactaaac 6751059  T
Q  119 acatatttaa 128  Q
    ||||||||||    
T  6751058 acatatttaa 6751049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 19 - 67
Target Start/End: Original strand, 47541803 - 47541851
Alignment:
Q  19 gactaattatgataacggagaaaaaatgtgtggattttaagaacattta 67  Q
    |||||||| |||||||||||| |||||||| ||||||||| ||||||||    
T  47541803 gactaattttgataacggagataaaatgtgaggattttaaaaacattta 47541851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 99 - 130
Target Start/End: Original strand, 47542078 - 47542109
Alignment:
Q  99 gcaaaatataaggactaaaaacatatttaacc 130  Q
    ||||||||||||||||||||||||||||||||    
T  47542078 gcaaaatataaggactaaaaacatatttaacc 47542109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 41 - 121
Target Start/End: Complemental strand, 47541607 - 47541527
Alignment:
Q  41 aaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaaaca 121  Q
    |||||||| ||||||||| ||||||||||  |||||| ||| ||||||| |||  ||   ||||| |||||||||||||||    
T  47541607 aaaatgtgaggattttaaaaacatttaatgaaatatagggactattcttcaaagggacataaaatgtaaggactaaaaaca 47541527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 54; Significance: 8e-22; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 18 - 135
Target Start/End: Complemental strand, 2517525 - 2517408
Alignment:
Q  18 agactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaa 117  Q
    ||||||||| |||||||||||| |||||||| ||||||||| ||||||||||  ||| || ||| ||||||| |||  || ||||||| |||||||||||    
T  2517525 agactaattttgataacggagataaaatgtgaggattttaaaaacatttaatgaaatgtagggactattcttcaaagagacgcaaaatgtaaggactaaa 2517426  T
Q  118 aacatatttaaccataaa 135  Q
    || |||||||||| ||||    
T  2517425 aatatatttaaccctaaa 2517408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 19 - 131
Target Start/End: Complemental strand, 2191328 - 2191216
Alignment:
Q  19 gactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaa 118  Q
    |||||||| |||||||||||| |||||||| ||||||||| ||||||||||  ||| || ||| ||||||| |||  |  ||||||| ||||||||||||    
T  2191328 gactaattttgataacggagataaaatgtgaggattttaaaaacatttaatgaaatgtaaggactattcttcaaaggggcgcaaaatgtaaggactaaaa 2191229  T
Q  119 acatatttaacca 131  Q
    |||||||||||||    
T  2191228 acatatttaacca 2191216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 18 - 130
Target Start/End: Original strand, 39729584 - 39729696
Alignment:
Q  18 agactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaa 117  Q
    |||||||||  ||||||||||| |||||||| ||||||||| || |||||||  ||||||  || ||||||| ||| ||| |||||||||||||||||||    
T  39729584 agactaatttcgataacggagataaaatgtgaggattttaaaaatatttaatgaaatataaagactattcttcaaactgacgcaaaatataaggactaaa 39729683  T
Q  118 aacatatttaacc 130  Q
    ||| || ||||||    
T  39729684 aacgtaattaacc 39729696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 19 - 130
Target Start/End: Original strand, 3691368 - 3691479
Alignment:
Q  19 gactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaa 118  Q
    |||||||| |||||||||||| ||||||||  |||||||| ||||||||||  ||| || ||| ||||||| |||  |  |||||||| |||||||||||    
T  3691368 gactaattttgataacggagataaaatgtgaagattttaaaaacatttaatgaaatgtagggactattcttcaaaggggcgcaaaatacaaggactaaaa 3691467  T
Q  119 acatatttaacc 130  Q
    ||||||||||||    
T  3691468 acatatttaacc 3691479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 25 - 130
Target Start/End: Original strand, 18107410 - 18107515
Alignment:
Q  25 ttatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaaacatat 124  Q
    |||||||||||||| |||||| |  ||||||||| |||||||| || ||| || ||||||||||||||| | | |||||||  | |||||||||||||||    
T  18107410 ttatgataacggaggaaaaatttagggattttaaaaacatttattaaaatgtaaggattattctttaaagtcacgcaaaatgcagggactaaaaacatat 18107509  T
Q  125 ttaacc 130  Q
    ||||||    
T  18107510 ttaacc 18107515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 14 - 130
Target Start/End: Original strand, 21217295 - 21217411
Alignment:
Q  14 gcagagactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggac 113  Q
    |||| |||||||| || |||||| || |||||||| ||||||||| ||||||||||  ||| || ||| ||||||| |||  |  ||||||| |||||||    
T  21217295 gcagggactaattttgttaacggggataaaatgtgaggattttaaaaacatttaatgaaatgtagggactattcttcaaagcggcgcaaaatgtaaggac 21217394  T
Q  114 taaaaacatatttaacc 130  Q
    |||||||||||||||||    
T  21217395 taaaaacatatttaacc 21217411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 14 - 130
Target Start/End: Complemental strand, 21265107 - 21264991
Alignment:
Q  14 gcagagactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggac 113  Q
    |||| |||||||| || |||||| || |||||||| ||||||||| ||||||||||  ||| || ||| ||||||| |||  |  ||||||| |||||||    
T  21265107 gcagggactaattttgttaacggggataaaatgtgaggattttaaaaacatttaatgaaatgtagggactattcttcaaagcggcgcaaaatgtaaggac 21265008  T
Q  114 taaaaacatatttaacc 130  Q
    |||||||||||||||||    
T  21265007 taaaaacatatttaacc 21264991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 15 - 130
Target Start/End: Complemental strand, 21182422 - 21182307
Alignment:
Q  15 cagagactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggact 114  Q
    |||||||||||| ||||||| |||| ||||||||   ||||||| ||||||||||  ||| || ||| ||||||| |||  |  ||||||| ||||||||    
T  21182422 cagagactaattttgataacagagataaaatgtgaaaattttaaaaacatttaatgaaatgtaaggactattcttcaaaggggcgcaaaatgtaaggact 21182323  T
Q  115 aaaaacatatttaacc 130  Q
    ||||||||||||||||    
T  21182322 aaaaacatatttaacc 21182307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 14 - 119
Target Start/End: Complemental strand, 3691199 - 3691094
Alignment:
Q  14 gcagagactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggac 113  Q
    |||| |||||||| ||||||||| || |||||||| ||||||||| ||||||||||  ||| || | | ||||||| |||| |  |||||||||||||||    
T  3691199 gcagggactaattttgataacggtgataaaatgtgaggattttaaaaacatttaatgaaatgtaggaactattcttcaaaagggcgcaaaatataaggac 3691100  T
Q  114 taaaaa 119  Q
    ||||||    
T  3691099 taaaaa 3691094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 128
Target Start/End: Original strand, 24093535 - 24093644
Alignment:
Q  19 gactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaa 118  Q
    |||||||| |||||||||||| |||||||  ||||||||| ||||||||||| |||||| | | ||||||| |||  | |||||||| |||||  |||||    
T  24093535 gactaattttgataacggagataaaatgtaaggattttaaaaacatttaataaaatataggcactattcttcaaatgggtgcaaaatgtaagggttaaaa 24093634  T
Q  119 acatatttaa 128  Q
    | ||||||||    
T  24093635 agatatttaa 24093644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 31 - 130
Target Start/End: Complemental strand, 2035707 - 2035608
Alignment:
Q  31 taacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaaacatatttaacc 130  Q
    ||||||||| |||||||  ||||||||| |||||||| || ||| || ||||||||||||||||    | |||||||| |||| ||||||||||||||||    
T  2035707 taacggagataaaatgtagggattttaaaaacatttattaaaatgtagggattattctttaaaagagggtaaaatatagggaccaaaaacatatttaacc 2035608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 19 - 130
Target Start/End: Complemental strand, 21217034 - 21216923
Alignment:
Q  19 gactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaa 118  Q
    |||||||| |||||  ||||| |||||||| ||||||||| ||||||||||  ||| || ||| ||||||| |||  |  ||||||| ||||||||||||    
T  21217034 gactaattttgatagtggagataaaatgtgaggattttaaaaacatttaatgaaatgtagggactattcttcaaagaggcgcaaaatgtaaggactaaaa 21216935  T
Q  119 acatatttaacc 130  Q
    | ||||||||||    
T  21216934 agatatttaacc 21216923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 19 - 130
Target Start/End: Original strand, 21265368 - 21265479
Alignment:
Q  19 gactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaa 118  Q
    |||||||| |||||  ||||| |||||||| ||||||||| ||||||||||  ||| || ||| ||||||| |||  |  ||||||| ||||||||||||    
T  21265368 gactaattttgatagtggagataaaatgtgaggattttaaaaacatttaatgaaatgtagggactattcttcaaagaggcgcaaaatgtaaggactaaaa 21265467  T
Q  119 acatatttaacc 130  Q
    | ||||||||||    
T  21265468 agatatttaacc 21265479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 21 - 130
Target Start/End: Complemental strand, 32860923 - 32860814
Alignment:
Q  21 ctaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaaac 120  Q
    |||||| |||| ||||||| |||||||  ||||||||| ||||||||||  ||||||  || |||| || |||  || ||||||||||| | ||||||||    
T  32860923 ctaattttgatcacggagataaaatgttaggattttaaaaacatttaatgaaatataacgactatttttcaaagggacgcaaaatataaaggctaaaaac 32860824  T
Q  121 atatttaacc 130  Q
    ||||||||||    
T  32860823 atatttaacc 32860814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 19 - 130
Target Start/End: Complemental strand, 24093267 - 24093156
Alignment:
Q  19 gactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaa 118  Q
    |||| ||| |||||||| ||| || ||||| ||||||||| ||||||||||  ||| || ||| ||||||| |||  |  ||||| | ||||||||||||    
T  24093267 gactgattttgataacgaagagaagatgtgaggattttaaaaacatttaatgaaatgtagggactattcttcaaaggggcgcaaagtgtaaggactaaaa 24093168  T
Q  119 acatatttaacc 130  Q
    ||||||||||||    
T  24093167 acatatttaacc 24093156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 13 - 130
Target Start/End: Original strand, 39096930 - 39097046
Alignment:
Q  13 agcagagactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataagga 112  Q
    ||||| ||||| ||| | |||||||| ||||||||  ||||||||| |||||||| |  ||| || ||||||||||  |||||  |||||||| || |||    
T  39096930 agcagggactatttacgctaacggaggaaaaatgtagggattttaaaaacatttattgaaatgtaaggattattctc-aaaatcgtgcaaaatgtaggga 39097028  T
Q  113 ctaaaaacatatttaacc 130  Q
    | ||||||||||||||||    
T  39097029 ccaaaaacatatttaacc 39097046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 31 - 130
Target Start/End: Complemental strand, 10709574 - 10709475
Alignment:
Q  31 taacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaaacatatttaacc 130  Q
    |||||| | ||||||||  ||||||||| |||||||| |  ||| || ||| ||||||| ||||| | ||||||| ||| ||| ||||||||||||||||    
T  10709574 taacggtggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattcttcaaaatcacgcaaaatctaaagaccaaaaacatatttaacc 10709475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 130
Target Start/End: Original strand, 32114450 - 32114561
Alignment:
Q  19 gactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaa 118  Q
    |||||||| ||||||| |||| ||| |||| | ||||||| || |||||||  ||| || ||| |||||||| ||  |  ||||||| ||||||||||||    
T  32114450 gactaattttgataacagagataaagtgtgagaattttaaaaatatttaatgaaatgtaaggactattctttgaagaggcgcaaaatgtaaggactaaaa 32114549  T
Q  119 acatatttaacc 130  Q
    | ||||||||||    
T  32114550 atatatttaacc 32114561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 31 - 130
Target Start/End: Complemental strand, 39096622 - 39096524
Alignment:
Q  31 taacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaaacatatttaacc 130  Q
    ||||||||||||||||| |||||||||| |||||||| |  ||| || ||| ||||| | |||||    ||||||||| |||| ||||||||||||||||    
T  39096622 taacggagaaaaaatgtatggattttaaaaacatttattgaaatgtaaggactattc-tcaaaatcgcacaaaatatagggaccaaaaacatatttaacc 39096524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 54 - 128
Target Start/End: Complemental strand, 2191466 - 2191392
Alignment:
Q  54 tttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaaacatatttaa 128  Q
    ||||| |||||||| || ||| || ||||||||||| ||| | | ||||||| ||||||| ||||||||||||||    
T  2191466 tttaaaaacatttattaaaatgtaaggattattcttcaaagtcaagcaaaatgtaaggaccaaaaacatatttaa 2191392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 83 - 129
Target Start/End: Original strand, 7083792 - 7083838
Alignment:
Q  83 tattctttaaaatgatgcaaaatataaggactaaaaacatatttaac 129  Q
    |||| ||||||  ||||||||||||||||| ||||||||||||||||    
T  7083792 tattttttaaagggatgcaaaatataaggattaaaaacatatttaac 7083838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 127
Target Start/End: Complemental strand, 7083622 - 7083525
Alignment:
Q  30 ataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaaacatattta 127  Q
    |||| ||||| |||||||| ||||||||| || |||||||  ||| || ||| ||||||| |||  || | ||||| |||||| ||||||||||||||    
T  7083622 ataagggagataaaatgtgaggattttaaaaaaatttaatgaaatgtagggactattcttcaaatggacgtaaaatgtaaggattaaaaacatattta 7083525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 79 - 135
Target Start/End: Complemental strand, 7083746 - 7083690
Alignment:
Q  79 ggattattctttaaaatgatgcaaaatataaggactaaaaacatatttaaccataaa 135  Q
    ||||||||||| ||| | ||||||||| || |||| |||||||||||||||| ||||    
T  7083746 ggattattcttcaaagtcatgcaaaatgtagggaccaaaaacatatttaaccctaaa 7083690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 10706624 - 10706680
Alignment:
Q  13 agcagagactaattatgataacggagaaaaaatgtgtggattttaagaacatttaat 69  Q
    ||||| ||||| || |||||||||||| |||||||| ||||||||| || |||||||    
T  10706624 agcagggactagttttgataacggagataaaatgtgaggattttaaaaatatttaat 10706680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 52; Significance: 1e-20; HSPs: 2)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 13 - 128
Target Start/End: Complemental strand, 34909 - 34794
Alignment:
Q  13 agcagagactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataagga 112  Q
    |||||||||||||| |||||||||||| |||||||| | | ||||| ||||||||||  ||| ||||||  ||| || |||  || ||||||||||||||    
T  34909 agcagagactaattttgataacggagataaaatgtgagtactttaaaaacatttaatgaaatgtatggaccattattcaaatagacgcaaaatataagga 34810  T
Q  113 ctaaaaacatatttaa 128  Q
    ||||||||||||||||    
T  34809 ctaaaaacatatttaa 34794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 20 - 129
Target Start/End: Original strand, 35172 - 35281
Alignment:
Q  20 actaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaaa 119  Q
    ||||||| | ||||| |||| |||||||| ||||||||| |||||| |||| ||| ||  || ||||||| |||  || ||||||| |||||||||||||    
T  35172 actaattttcataaccgagataaaatgtgaggattttaaaaacattcaataaaatgtagagactattcttcaaagggacgcaaaatgtaaggactaaaaa 35271  T
Q  120 catatttaac 129  Q
    ||||||||||    
T  35272 catatttaac 35281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 52; Significance: 1e-20; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 19 - 130
Target Start/End: Complemental strand, 5974122 - 5974011
Alignment:
Q  19 gactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaa 118  Q
    |||||||| | |||||||| | |||||||| ||||||||| ||||||||||  ||| || ||| ||||||| |||  | |||||||||||||||||||||    
T  5974122 gactaattttaataacggaaataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaaggggtgcaaaatataaggactaaaa 5974023  T
Q  119 acatatttaacc 130  Q
    ||||||||||||    
T  5974022 acatatttaacc 5974011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 41 - 130
Target Start/End: Original strand, 8710341 - 8710430
Alignment:
Q  41 aaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaaacatatttaacc 130  Q
    |||||||| ||||||||| ||||||||||  ||| || ||| ||||||| |||  | |||||||||||||||||||||||||||||||||    
T  8710341 aaaatgtggggattttaaaaacatttaatgaaatgtaaggactattcttcaaaggggtgcaaaatataaggactaaaaacatatttaacc 8710430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 22 - 130
Target Start/End: Complemental strand, 1869559 - 1869451
Alignment:
Q  22 taattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaaaca 121  Q
    ||||| |||||||||||| |||||||| ||||||||| ||||||||||  ||| ||   |||||| |||||| || || | ||| |||||||||||||||    
T  1869559 taattttgataacggagataaaatgtgaggattttaaaaacatttaatgaaatgtagaaattattttttaaagtggtgtagaatgtaaggactaaaaaca 1869460  T
Q  122 tatttaacc 130  Q
    |||||||||    
T  1869459 tatttaacc 1869451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 14 - 128
Target Start/End: Original strand, 25932359 - 25932476
Alignment:
Q  14 gcagagactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattatt---ctttaaaatgatgcaaaatataag 110  Q
    ||||||||||||| |||||||||||| |||||||| | ||||||| |||||| ||   ||| ||  || ||||   ||| |||||| |||||||||||||    
T  25932359 gcagagactaattttgataacggagataaaatgtgagaattttaataacattgaacgaaatgtagtgactattaatcttcaaaatggtgcaaaatataag 25932458  T
Q  111 gactaaaaacatatttaa 128  Q
    ||||||||||||||||||    
T  25932459 gactaaaaacatatttaa 25932476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 41 - 130
Target Start/End: Complemental strand, 211530 - 211441
Alignment:
Q  41 aaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaaacatatttaacc 130  Q
    |||||||| ||||||||| | ||||||||  ||| || ||| ||||||| |||  |  ||||||| ||||||||||||||||||||||||    
T  211530 aaaatgtgaggattttaaaatcatttaatgaaatgtacggactattcttcaaaggggcgcaaaatgtaaggactaaaaacatatttaacc 211441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 69
Target Start/End: Complemental strand, 21113146 - 21113090
Alignment:
Q  13 agcagagactaattatgataacggagaaaaaatgtgtggattttaagaacatttaat 69  Q
    |||||||||||||| |||||| ||||| |||||||| | ||||||| ||||||||||    
T  21113146 agcagagactaattttgataaaggagataaaatgtgagaattttaaaaacatttaat 21113090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 21 - 135
Target Start/End: Complemental strand, 4510298 - 4510183
Alignment:
Q  21 ctaattatgataacggagaaaaaatgtgt-ggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaaa 119  Q
    |||||| ||||||| |||| ||||| ||  ||||||||| ||||||||||  ||| || ||| ||||||| |||  |  | ||||| |||||||||||||    
T  4510298 ctaattttgataaccgagataaaatatggaggattttaaaaacatttaatgaaatgtagggactattcttcaaataggcgtaaaatgtaaggactaaaaa 4510199  T
Q  120 catatttaaccataaa 135  Q
    ||||||||||| ||||    
T  4510198 catatttaaccctaaa 4510183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 13 - 129
Target Start/End: Original strand, 14712979 - 14713095
Alignment:
Q  13 agcagagactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataagga 112  Q
    |||||||||||||| ||||||| |||| ||||| || | ||||  | ||||||||||  ||| || ||| ||||||| ||||    ||||||| |||| |    
T  14712979 agcagagactaattttgataacagagataaaatatgagcatttctaaaacatttaatgaaatgtaaggactattcttcaaaagagcgcaaaatgtaagaa 14713078  T
Q  113 ctaaaaacatatttaac 129  Q
     ||||||||||||||||    
T  14713079 ttaaaaacatatttaac 14713095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 50 - 130
Target Start/End: Original strand, 19595659 - 19595739
Alignment:
Q  50 ggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaaacatatttaacc 130  Q
    ||||||||| || ||||| |  ||| || ||| |||||||||||| | |||||||| || ||||||| |||||||||||||    
T  19595659 ggattttaaaaatatttattgaaatgtagggactattctttaaaaaggtgcaaaatgtatggactaataacatatttaacc 19595739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 50; Significance: 2e-19; HSPs: 20)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 22 - 135
Target Start/End: Original strand, 44504368 - 44504481
Alignment:
Q  22 taattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaaaca 121  Q
    ||||| |||||||||||| |||||||| ||||||||| ||||||||||  ||| || ||| ||||||| |||  | |||||||| |||||||||||||||    
T  44504368 taattttgataacggagataaaatgtgaggattttaaaaacatttaatgaaatgtaaggactattcttcaaaggggtgcaaaatgtaaggactaaaaaca 44504467  T
Q  122 tatttaaccataaa 135  Q
     |||||||| ||||    
T  44504468 catttaaccctaaa 44504481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 13 - 130
Target Start/End: Complemental strand, 22814413 - 22814296
Alignment:
Q  13 agcagagactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataagga 112  Q
    ||||| |||||||| |||||||| ||| |||||||| ||||||||| ||||||||||  ||| |||||| ||||||| |||  |  ||||||| |||| |    
T  22814413 agcagggactaattttgataacgaagataaaatgtgaggattttaaaaacatttaatgaaatgtatggactattcttcaaaggggcgcaaaatgtaagaa 22814314  T
Q  113 ctaaaaacatatttaacc 130  Q
     |||||||||||||||||    
T  22814313 ttaaaaacatatttaacc 22814296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 15 - 130
Target Start/End: Complemental strand, 51471450 - 51471335
Alignment:
Q  15 cagagactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggact 114  Q
    |||||||||||| |||||||||||| |||||||| ||||||||| ||||||||||  ||| ||   | ||||||| |||  || ||||||| |||| |||    
T  51471450 cagagactaattttgataacggagataaaatgtgaggattttaaaaacatttaatgaaatgtagaaactattcttcaaagggacgcaaaatgtaagaact 51471351  T
Q  115 aaaaacatatttaacc 130  Q
    || |||||||||||||    
T  51471350 aagaacatatttaacc 51471335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 15 - 135
Target Start/End: Original strand, 9218489 - 9218608
Alignment:
Q  15 cagagactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggact 114  Q
    |||||||||||| |||||||| ||| ||||||||  |||||||| ||||||||||  |||||| ||| ||||||| |||     ||||||| ||| ||||    
T  9218489 cagagactaatt-tgataacgaagataaaatgtgatgattttaaaaacatttaatgaaatatagggactattcttcaaaggagcgcaaaatgtaatgact 9218587  T
Q  115 aaaaacatatttaaccataaa 135  Q
    |||||||||||||||| ||||    
T  9218588 aaaaacatatttaaccctaaa 9218608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 22 - 137
Target Start/End: Complemental strand, 25770429 - 25770314
Alignment:
Q  22 taattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaaaca 121  Q
    ||||| ||||||||  || |||||||| ||||| ||| ||||||||||  ||| || ||| ||||||| |||  ||| |||||| |||||||||||||||    
T  25770429 taattttgataacgatgataaaatgtgaggattctaaaaacatttaatgaaatgtagggactattcttcaaagggatacaaaatgtaaggactaaaaaca 25770330  T
Q  122 tatttaaccataaatt 137  Q
    |||| |||| ||||||    
T  25770329 tattgaaccctaaatt 25770314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 19 - 133
Target Start/End: Original strand, 13637759 - 13637873
Alignment:
Q  19 gactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaa 118  Q
    ||||| || |||||||||||| |||||||| ||||||||| || |||||||  ||| ||  || ||||||| |||  |  ||||||| ||||||||| ||    
T  13637759 gactagttttgataacggagataaaatgtgaggattttaaaaatatttaatgaaatgtagagactattcttcaaaggggcgcaaaatgtaaggactagaa 13637858  T
Q  119 acatatttaaccata 133  Q
    |||||||||||||||    
T  13637859 acatatttaaccata 13637873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 19 - 127
Target Start/End: Complemental strand, 37172192 - 37172084
Alignment:
Q  19 gactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaa 118  Q
    |||||||| |||||||||||| ||| |||| ||||||||| ||||||||||  ||| ||  || |||||||||||     ||||||| ||||||||||||    
T  37172192 gactaattttgataacggagataaactgtgaggattttaaaaacatttaatgaaatgtagagactattctttaaataagcgcaaaatgtaaggactaaaa 37172093  T
Q  119 acatattta 127  Q
    | |||||||    
T  37172092 aaatattta 37172084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 13 - 128
Target Start/End: Complemental strand, 38485813 - 38485699
Alignment:
Q  13 agcagagactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataagga 112  Q
    |||| ||||||||| |||||||||||| ||||||   ||||||||| ||||| ||||| ||| |||||| ||||||| |||  |   |||||| ||||||    
T  38485813 agcaaagactaattttgataacggaga-aaaatgcaaggattttaaaaacatataataaaatgtatggactattcttcaaagaggcacaaaatgtaagga 38485715  T
Q  113 ctaaaaacatatttaa 128  Q
    |||||| |||||||||    
T  38485714 ctaaaatcatatttaa 38485699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 19 - 130
Target Start/End: Complemental strand, 43933551 - 43933440
Alignment:
Q  19 gactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaa 118  Q
    |||||||| |||||||| ||| |||||||| ||||||||| || |||||||  ||| || ||| ||||||| |||  |   |||||| ||||||||||||    
T  43933551 gactaattttgataacgaagataaaatgtgaggattttaaaaatatttaatgaaatgtagggactattcttcaaacgggcacaaaatgtaaggactaaaa 43933452  T
Q  119 acatatttaacc 130  Q
    | ||||||||||    
T  43933451 atatatttaacc 43933440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 137
Target Start/End: Complemental strand, 4199569 - 4199446
Alignment:
Q  13 agcagagactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataagga 112  Q
    ||||| ||||| ||| | |||||||  ||||||||  ||||||||| |||||||| |  |||||| ||| ||||||  |||||  |||||||| || |||    
T  4199569 agcagggactatttacgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatataaggactattctc-aaaatcgtgcaaaatgtaggga 4199471  T
Q  113 ctaaaaacatatttaaccataaatt 137  Q
    | |||||||||||||||| ||||||    
T  4199470 ccaaaaacatatttaaccctaaatt 4199446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 70
Target Start/End: Complemental strand, 27013521 - 27013469
Alignment:
Q  18 agactaattatgataacggagaaaaaatgtgtggattttaagaacatttaata 70  Q
    ||||||||| |||||||||||| |||||||  ||||||||| |||||||||||    
T  27013521 agactaattgtgataacggagataaaatgtaaggattttaaaaacatttaata 27013469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 130
Target Start/End: Original strand, 34743444 - 34743560
Alignment:
Q  14 gcagagactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggac 113  Q
    ||||||||||||| |||||||  | | |||||||| ||||||| | ||||||||||  ||| || |||| |||||| |||  || ||||| | |||||||    
T  34743444 gcagagactaattttgataacatatataaaatgtgaggatttttaaaacatttaatgaaatgtaaggataattcttcaaagggacgcaaagtgtaaggac 34743543  T
Q  114 taaaaacatatttaacc 130  Q
    || | ||||||||||||    
T  34743544 tagatacatatttaacc 34743560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 43 - 130
Target Start/End: Original strand, 132062 - 132149
Alignment:
Q  43 aatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaaacatatttaacc 130  Q
    |||||| ||||||||| ||||||||||  ||| || ||| ||||||| |||    |||||||| ||||||||||| ||||||||||||    
T  132062 aatgtgaggattttaaaaacatttaatgaaatgtaaggactattcttcaaaggagtgcaaaatgtaaggactaaatacatatttaacc 132149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 122
Target Start/End: Complemental strand, 44504203 - 44504100
Alignment:
Q  19 gactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaa 118  Q
    |||||||| |||||||||||| |||||||| ||||||||| || |||||||  ||| || ||| ||||||| |||  ||  |||||| |||| ||||||     
T  44504203 gactaattttgataacggagataaaatgtgaggattttaaaaatatttaatgaaatgtagggactattcttcaaatggacacaaaatgtaagaactaaag 44504104  T
Q  119 acat 122  Q
    ||||    
T  44504103 acat 44504100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 131
Target Start/End: Complemental strand, 50732342 - 50732224
Alignment:
Q  13 agcagagactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatga-tgcaaaatataagg 111  Q
    ||||| |||||||| |||||||||||| |||||| | ||||||||| || |||||||  ||| |||||| |||| ||| ||| ||  ||||||| |||||    
T  50732342 agcagggactaattttgataacggagataaaatgcgaggattttaaaaatatttaatgaaatgtatggactatt-tttcaaaggagcgcaaaatgtaagg 50732244  T
Q  112 actaaaaacatatttaacca 131  Q
    |  |||||||||||| ||||    
T  50732243 ataaaaaacatatttgacca 50732224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 131
Target Start/End: Original strand, 50780513 - 50780631
Alignment:
Q  13 agcagagactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatga-tgcaaaatataagg 111  Q
    ||||| |||||||| |||||||||||| |||||| | ||||||||| || |||||||  ||| |||||| |||| ||| ||| ||  ||||||| |||||    
T  50780513 agcagggactaattttgataacggagataaaatgcgaggattttaaaaatatttaatgaaatgtatggactatt-tttcaaaggagcgcaaaatgtaagg 50780611  T
Q  112 actaaaaacatatttaacca 131  Q
    |  |||||||||||| ||||    
T  50780612 ataaaaaacatatttgacca 50780631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 100 - 138
Target Start/End: Original strand, 22814641 - 22814679
Alignment:
Q  100 caaaatataaggactaaaaacatatttaaccataaattc 138  Q
    ||||||||||| ||||||||||||||||||| |||||||    
T  22814641 caaaatataagtactaaaaacatatttaaccctaaattc 22814679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 14 - 130
Target Start/End: Original strand, 20831075 - 20831191
Alignment:
Q  14 gcagagactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggac 113  Q
    |||| ||||| || || ||||||| |||||||||  ||||||||| |||||||| |  ||| || ||| ||||  |||||||||   ||||| || ||||    
T  20831075 gcagggactatttgtgctaacggataaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgagaaaaaatgtagggac 20831174  T
Q  114 taaaaacatatttaacc 130  Q
     ||||||||||||||||    
T  20831175 caaaaacatatttaacc 20831191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 104 - 132
Target Start/End: Original strand, 50002057 - 50002085
Alignment:
Q  104 atataaggactaaaaacatatttaaccat 132  Q
    |||||||||||||||||||||||||||||    
T  50002057 atataaggactaaaaacatatttaaccat 50002085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 51755903 - 51755943
Alignment:
Q  29 gataacggagaaaaaatgtgtggattttaagaacatttaat 69  Q
    ||||||||||| |||||||| ||||||||| ||||||||||    
T  51755903 gataacggagataaaatgtgaggattttaaaaacatttaat 51755943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 49; Significance: 7e-19; HSPs: 19)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 22 - 130
Target Start/End: Complemental strand, 28854785 - 28854677
Alignment:
Q  22 taattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaaaca 121  Q
    ||||| ||||||| || | |||||||| ||||||||| ||||||||||| ||| || ||| |||||||||||  |  |||||||||||||| ||||||||    
T  28854785 taattttgataactgaaataaaatgtgaggattttaaaaacatttaataaaatgtagggagtattctttaaatgggcgcaaaatataaggattaaaaaca 28854686  T
Q  122 tatttaacc 130  Q
    |||||||||    
T  28854685 tatttaacc 28854677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 38 - 133
Target Start/End: Complemental strand, 30938687 - 30938592
Alignment:
Q  38 gaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaaacatatttaaccata 133  Q
    ||||||||||  | ||||||| ||||||||||| ||| ||||||||||||||||||  |  ||||||| |||||||||||||||||||||| ||||    
T  30938687 gaaaaaatgtaggaattttaaaaacatttaataaaatgtatggattattctttaaagaggcgcaaaatgtaaggactaaaaacatatttaatcata 30938592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 21 - 130
Target Start/End: Complemental strand, 18152865 - 18152756
Alignment:
Q  21 ctaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaaac 120  Q
    |||||| |||||||||||| |||||||| ||||||||||||||||||| | ||| || ||| ||||||| |||  |  ||||||| |||| ||| |||||    
T  18152865 ctaattttgataacggagataaaatgtgaggattttaagaacatttaacaaaatgtagggactattcttcaaaggggcgcaaaatgtaagaactgaaaac 18152766  T
Q  121 atatttaacc 130  Q
    ||||||||||    
T  18152765 atatttaacc 18152756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 19 - 128
Target Start/End: Original strand, 20544290 - 20544398
Alignment:
Q  19 gactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaa 118  Q
    |||| ||| |||||||| ||| |||||||| | ||||||| ||||||||||  ||| || ||| ||||||| |||| | |||||||||||||||||||||    
T  20544290 gactgattttgataacgaagataaaatgtgag-attttaaaaacatttaatgaaatgtaaggactattcttcaaaaaggtgcaaaatataaggactaaaa 20544388  T
Q  119 acatatttaa 128  Q
    ||||||||||    
T  20544389 acatatttaa 20544398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 20 - 136
Target Start/End: Original strand, 10466759 - 10466875
Alignment:
Q  20 actaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaaa 119  Q
    ||||||| |||||| ||||| ||||||||  |||||||| ||||||||||| ||||||  || ||||||| |||  || ||||||| ||| || ||||||    
T  10466759 actaattttgataatggagataaaatgtgacgattttaaaaacatttaataaaatatagagactattcttcaaatagacgcaaaatgtaaagattaaaaa 10466858  T
Q  120 catatttaaccataaat 136  Q
    ||||||||||| |||||    
T  10466859 catatttaaccctaaat 10466875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 19 - 130
Target Start/End: Complemental strand, 17075330 - 17075219
Alignment:
Q  19 gactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaa 118  Q
    |||||||| || |||||| || |||||||| ||||||||| ||| ||||||  ||| || ||| ||||||| |||  |  ||||||||||||||||||||    
T  17075330 gactaattttgttaacggggataaaatgtgaggattttaaaaacttttaatgaaatgtagggactattcttcaaagcggcgcaaaatataaggactaaaa 17075231  T
Q  119 acatatttaacc 130  Q
    ||||||||||||    
T  17075230 acatatttaacc 17075219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 15 - 130
Target Start/End: Complemental strand, 28852808 - 28852693
Alignment:
Q  15 cagagactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggact 114  Q
    ||||| |||||| ||||||||| || |||||||| ||||||||| ||||||||||  ||| || ||| |||| ||||||  ||  |||||| |||||| |    
T  28852808 cagaggctaattttgataacggggataaaatgtgaggattttaaaaacatttaatgaaatgtagggagtattatttaaatggacacaaaatgtaaggatt 28852709  T
Q  115 aaaaacatatttaacc 130  Q
    ||||||||||||||||    
T  28852708 aaaaacatatttaacc 28852693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 16 - 122
Target Start/End: Original strand, 22948854 - 22948960
Alignment:
Q  16 agagactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggacta 115  Q
    ||||||||||| |||||||||||| |||||||| ||||||||| ||||||||||  ||| ||  || ||||||| |||  |  ||||||| |||||||||    
T  22948854 agagactaattttgataacggagataaaatgtgaggattttaaaaacatttaatgaaatgtagagactattcttcaaagggtcgcaaaatgtaaggacta 22948953  T
Q  116 aaaacat 122  Q
    |||||||    
T  22948954 aaaacat 22948960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 19 - 129
Target Start/End: Original strand, 44803611 - 44803721
Alignment:
Q  19 gactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaa 118  Q
    |||||||| |||||||||||| |||||||| | ||||||| ||||||||||  ||| ||  || |||||||||||     ||||||| ||||||||||||    
T  44803611 gactaattttgataacggagataaaatgtgagaattttaaaaacatttaatgaaatgtagagactattctttaaagaagcgcaaaatgtaaggactaaaa 44803710  T
Q  119 acatatttaac 129  Q
    |||||||||||    
T  44803711 acatatttaac 44803721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 51 - 135
Target Start/End: Complemental strand, 28838604 - 28838520
Alignment:
Q  51 gattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaaacatatttaaccataaa 135  Q
    |||||||| |||||||| || ||| || |||||||| || ||||||||||||||| || |||| |||||||||||||||| ||||    
T  28838604 gattttaaaaacatttattaaaatgtaaggattatttttcaaaatgatgcaaaatgtagggaccaaaaacatatttaaccttaaa 28838520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 19 - 130
Target Start/End: Original strand, 17075596 - 17075707
Alignment:
Q  19 gactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaa 118  Q
    |||||||| |||||  ||||| |||||||| ||||||||| ||||||||||  ||| || ||| ||||||| |||  |  ||||||| ||||||||||||    
T  17075596 gactaattttgatagtggagataaaatgtgaggattttaaaaacatttaatgaaatgtagggactattcttcaaagaggcgcaaaatgtaaggactaaaa 17075695  T
Q  119 acatatttaacc 130  Q
    | ||||||||||    
T  17075696 agatatttaacc 17075707  T

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Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 26 - 135
Target Start/End: Original strand, 16755619 - 16755727
Alignment:
Q  26 tatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaaacatatt 125  Q
    |||| ||||||||||||||| || ||||||||| || |||||||  ||||||  || ||||||| ||| ||  ||||||||| |||| ||||||||||||    
T  16755619 tatggtaacggagaaaaaatatgaggattttaaaaatatttaatgaaatatagagactattcttcaaagtggcgcaaaatat-aggattaaaaacatatt 16755717  T
Q  126 taaccataaa 135  Q
    ||||| ||||    
T  16755718 taaccctaaa 16755727  T

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Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 16 - 69
Target Start/End: Original strand, 32092505 - 32092558
Alignment:
Q  16 agagactaattatgataacggagaaaaaatgtgtggattttaagaacatttaat 69  Q
    ||||||||||| |||||||||||| |||||||| ||||||||| ||||||||||    
T  32092505 agagactaattttgataacggagataaaatgtgaggattttaaaaacatttaat 32092558  T

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Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 130
Target Start/End: Complemental strand, 32092340 - 32092228
Alignment:
Q  18 agactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaa 117  Q
    ||||||||| |||||||  | | |||||||| ||||||||| ||||||||||  |||  | ||| ||||||| |||  |  ||||||| |||||||||||    
T  32092340 agactaattttgataacaaacacaaaatgtgaggattttaaaaacatttaatgaaatgcagggactattcttcaaagaggcgcaaaatgtaaggactaaa 32092241  T
Q  118 aacatatttaacc 130  Q
    |||||||||||||    
T  32092240 aacatatttaacc 32092228  T

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Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 70
Target Start/End: Original strand, 11975038 - 11975093
Alignment:
Q  15 cagagactaattatgataacggagaaaaaatgtgtggattttaagaacatttaata 70  Q
    |||||||||||| |||||||||| | |||||||| ||||||||| |||||||||||    
T  11975038 cagagactaattttgataacggaaataaaatgtgaggattttaaaaacatttaata 11975093  T

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Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 28838463 - 28838413
Alignment:
Q  19 gactaattatgataacggagaaaaaatgtgtggattttaagaacatttaat 69  Q
    |||||||| |||||||||||| |||||||| ||||||||| ||||||||||    
T  28838463 gactaattttgataacggagataaaatgtgaggattttaaaaacatttaat 28838413  T

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Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 13 - 130
Target Start/End: Complemental strand, 20544028 - 20543911
Alignment:
Q  13 agcagagactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataagga 112  Q
    |||||| ||||||| |||||||||||| ||||| || ||||||||| || |||||||  ||| || ||| ||||||| |||  |   |||||| |||| |    
T  20544028 agcagaaactaattttgataacggagataaaatatgaggattttaaaaaaatttaatgaaatgtagggactattcttcaaaggggcacaaaatgtaagaa 20543929  T
Q  113 ctaaaaacatatttaacc 130  Q
     |||||||||||||||||    
T  20543928 ttaaaaacatatttaacc 20543911  T

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Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 130
Target Start/End: Complemental strand, 4152836 - 4152720
Alignment:
Q  14 gcagagactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggac 113  Q
    |||||||| |||| || ||||||   ||||||||  ||||||||| |||||| |||| ||| || |||||||||||||||||   | ||| | || | ||    
T  4152836 gcagagaccaattttgttaacggtagaaaaatgtagggattttaaaaacattcaataaaatgtagggattattctttaaaattgcgtaaactgtaggaac 4152737  T
Q  114 taaaaacatatttaacc 130  Q
    |||||||||||||||||    
T  4152736 taaaaacatatttaacc 4152720  T

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Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 99 - 130
Target Start/End: Complemental strand, 23548085 - 23548054
Alignment:
Q  99 gcaaaatataaggactaaaaacatatttaacc 130  Q
    ||||||||||||||||||||||||||||||||    
T  23548085 gcaaaatataaggactaaaaacatatttaacc 23548054  T

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Target: scaffold0148 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 130
Target Start/End: Original strand, 32968 - 33084
Alignment:
Q  14 gcagagactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggac 113  Q
    |||| ||||| || || ||||||| |||||||||  ||||||||| |||||||| |  ||| || ||| ||||  ||||||||| ||||||| || ||||    
T  32968 gcagggactatttgtgctaacggataaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtagggac 33067  T
Q  114 taaaaacatatttaacc 130  Q
     ||||||||||||||||    
T  33068 caaaaacatatttaacc 33084  T

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Target: scaffold0148; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 14 - 130
Target Start/End: Complemental strand, 29390 - 29274
Alignment:
Q  14 gcagagactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggac 113  Q
    |||| ||||| || || |||||||  ||||||||  ||||||||| |||||||| |  ||| || ||| ||||  ||||||||| ||||||| || ||||    
T  29390 gcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtagggac 29291  T
Q  114 taaaaacatatttaacc 130  Q
     || |||||||||||||    
T  29290 caataacatatttaacc 29274  T

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