View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15945_low_9 (Length: 438)

Name: NF15945_low_9
Description: NF15945
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15945_low_9
NF15945_low_9
[»] chr8 (25 HSPs)
chr8 (182-425)||(9928320-9928563)
chr8 (17-188)||(9928107-9928278)
chr8 (96-138)||(32506987-32507029)
chr8 (92-138)||(11188253-11188299)
chr8 (92-138)||(43812456-43812502)
chr8 (97-138)||(1561210-1561251)
chr8 (97-138)||(3945205-3945246)
chr8 (97-138)||(40728516-40728557)
chr8 (98-138)||(4558730-4558770)
chr8 (102-138)||(10939343-10939379)
chr8 (97-143)||(10114421-10114467)
chr8 (97-134)||(1433476-1433513)
chr8 (97-138)||(4763849-4763890)
chr8 (101-134)||(10062229-10062262)
chr8 (97-138)||(14482133-14482174)
chr8 (97-138)||(26056016-26056057)
chr8 (105-138)||(26215435-26215468)
chr8 (109-138)||(26820142-26820171)
chr8 (105-138)||(29699193-29699226)
chr8 (110-139)||(33522430-33522459)
chr8 (97-138)||(38561657-38561698)
chr8 (97-138)||(38874577-38874618)
chr8 (105-138)||(42597340-42597373)
chr8 (99-143)||(1112786-1112830)
chr8 (106-138)||(31884534-31884566)
[»] chr4 (27 HSPs)
chr4 (98-181)||(51044514-51044597)
chr4 (99-170)||(21043280-21043351)
chr4 (97-138)||(4191670-4191711)
chr4 (97-138)||(24936241-24936282)
chr4 (97-138)||(28623220-28623261)
chr4 (97-138)||(42641731-42641772)
chr4 (97-138)||(47970249-47970290)
chr4 (104-135)||(3176223-3176254)
chr4 (105-136)||(19422357-19422388)
chr4 (98-137)||(21683578-21683617)
chr4 (95-138)||(21952504-21952547)
chr4 (103-138)||(44119260-44119295)
chr4 (103-138)||(52645847-52645882)
chr4 (97-131)||(4663801-4663835)
chr4 (105-138)||(6364088-6364121)
chr4 (97-138)||(11389457-11389498)
chr4 (97-138)||(20907104-20907145)
chr4 (97-126)||(27321941-27321970)
chr4 (105-138)||(30024639-30024672)
chr4 (101-138)||(35743239-35743276)
chr4 (97-142)||(36048731-36048775)
chr4 (105-138)||(44249225-44249258)
chr4 (97-138)||(46176104-46176145)
chr4 (98-138)||(4798657-4798697)
chr4 (99-131)||(23819023-23819055)
chr4 (141-181)||(29601042-29601082)
chr4 (106-138)||(49803151-49803183)
[»] chr5 (26 HSPs)
chr5 (94-138)||(38033896-38033940)
chr5 (97-138)||(35135760-35135801)
chr5 (105-139)||(18704132-18704166)
chr5 (97-138)||(40048378-40048419)
chr5 (98-142)||(31208405-31208449)
chr5 (99-138)||(7096225-7096264)
chr5 (105-140)||(8089242-8089277)
chr5 (99-138)||(13224362-13224401)
chr5 (100-143)||(34117626-34117669)
chr5 (96-126)||(10907309-10907339)
chr5 (105-143)||(12460093-12460131)
chr5 (96-134)||(33459037-33459075)
chr5 (105-138)||(1773523-1773556)
chr5 (105-138)||(12407759-12407792)
chr5 (97-138)||(14714937-14714978)
chr5 (97-138)||(20982233-20982274)
chr5 (97-138)||(26516229-26516270)
chr5 (97-138)||(27106021-27106062)
chr5 (105-138)||(29117028-29117061)
chr5 (97-138)||(29588811-29588852)
chr5 (97-138)||(40097501-40097542)
chr5 (97-138)||(40499773-40499814)
chr5 (97-137)||(4991042-4991082)
chr5 (98-138)||(9927517-9927557)
chr5 (98-138)||(13508464-13508504)
chr5 (98-138)||(21782667-21782707)
[»] chr3 (31 HSPs)
chr3 (98-181)||(12985379-12985459)
chr3 (98-135)||(24605117-24605154)
chr3 (97-143)||(20173981-20174027)
chr3 (97-138)||(2128349-2128390)
chr3 (97-138)||(16790186-16790227)
chr3 (102-139)||(32663578-32663615)
chr3 (107-138)||(36887463-36887494)
chr3 (99-138)||(37788794-37788832)
chr3 (99-138)||(43116526-43116565)
chr3 (97-131)||(24158607-24158641)
chr3 (97-139)||(28283674-28283716)
chr3 (97-138)||(2070986-2071027)
chr3 (97-138)||(2304339-2304380)
chr3 (97-138)||(8142808-8142849)
chr3 (108-137)||(24235782-24235811)
chr3 (97-138)||(38462212-38462253)
chr3 (97-138)||(39743836-39743877)
chr3 (97-138)||(39971250-39971291)
chr3 (97-134)||(41028953-41028990)
chr3 (97-138)||(41159040-41159081)
chr3 (97-138)||(42084349-42084390)
chr3 (105-138)||(48364977-48365010)
chr3 (98-143)||(48597682-48597727)
chr3 (106-138)||(1395611-1395643)
chr3 (98-126)||(1809945-1809973)
chr3 (98-138)||(2153614-2153654)
chr3 (98-138)||(3182460-3182500)
chr3 (98-138)||(20192704-20192744)
chr3 (105-137)||(23815992-23816024)
chr3 (102-138)||(30669068-30669104)
chr3 (110-138)||(32095289-32095317)
[»] chr7 (29 HSPs)
chr7 (95-142)||(2894746-2894793)
chr7 (97-138)||(2223079-2223120)
chr7 (97-142)||(46223166-46223211)
chr7 (99-138)||(35809002-35809041)
chr7 (97-135)||(25507282-25507320)
chr7 (97-135)||(25558290-25558328)
chr7 (97-135)||(25558488-25558526)
chr7 (105-138)||(1432065-1432098)
chr7 (97-138)||(4591473-4591514)
chr7 (97-138)||(27481392-27481433)
chr7 (98-143)||(33894555-33894600)
chr7 (97-138)||(44241791-44241832)
chr7 (98-138)||(28165023-28165063)
chr7 (97-132)||(5939015-5939050)
chr7 (97-168)||(6552339-6552409)
chr7 (104-138)||(28702698-28702732)
chr7 (105-138)||(2013138-2013171)
chr7 (97-138)||(3610838-3610879)
chr7 (97-138)||(7244633-7244674)
chr7 (97-138)||(21853214-21853255)
chr7 (97-138)||(24973875-24973916)
chr7 (97-138)||(30133980-30134021)
chr7 (97-138)||(30496635-30496676)
chr7 (97-138)||(49060471-49060512)
chr7 (98-138)||(5373157-5373197)
chr7 (94-138)||(10079438-10079482)
chr7 (98-138)||(22388002-22388042)
chr7 (99-135)||(38713128-38713164)
chr7 (110-138)||(39591565-39591593)
[»] chr2 (28 HSPs)
chr2 (96-138)||(10143102-10143144)
chr2 (97-138)||(10150686-10150727)
chr2 (97-142)||(15171181-15171226)
chr2 (98-138)||(38239649-38239689)
chr2 (97-138)||(13864581-13864622)
chr2 (97-138)||(43431542-43431583)
chr2 (98-138)||(5045255-5045295)
chr2 (99-135)||(15173459-15173495)
chr2 (98-138)||(41033048-41033088)
chr2 (107-142)||(40837522-40837557)
chr2 (100-134)||(9875559-9875593)
chr2 (97-138)||(3611157-3611198)
chr2 (97-138)||(3673738-3673779)
chr2 (105-138)||(5133711-5133744)
chr2 (97-138)||(7825183-7825224)
chr2 (97-138)||(9478230-9478271)
chr2 (97-138)||(11344382-11344423)
chr2 (105-138)||(24141747-24141780)
chr2 (97-138)||(25609727-25609768)
chr2 (97-138)||(28803604-28803645)
chr2 (97-138)||(31461369-31461410)
chr2 (97-138)||(34054999-34055040)
chr2 (97-138)||(44606186-44606227)
chr2 (110-138)||(1939430-1939458)
chr2 (98-138)||(2416245-2416285)
chr2 (103-139)||(29430693-29430729)
chr2 (98-138)||(40672894-40672934)
chr2 (106-138)||(41022176-41022208)
[»] chr6 (21 HSPs)
chr6 (101-138)||(5554863-5554900)
chr6 (97-138)||(24836297-24836338)
chr6 (97-138)||(33116536-33116577)
chr6 (94-138)||(33068659-33068703)
chr6 (104-138)||(34544548-34544582)
chr6 (97-138)||(31461609-31461650)
chr6 (97-138)||(32975909-32975950)
chr6 (98-138)||(4247732-4247772)
chr6 (102-138)||(33500579-33500615)
chr6 (97-140)||(33259747-33259790)
chr6 (100-138)||(507154-507192)
chr6 (97-127)||(2548316-2548346)
chr6 (105-139)||(10836760-10836794)
chr6 (108-138)||(31672012-31672042)
chr6 (97-138)||(2023727-2023768)
chr6 (100-137)||(6647323-6647360)
chr6 (105-138)||(9559639-9559672)
chr6 (97-138)||(31668783-31668824)
chr6 (97-138)||(32843413-32843454)
chr6 (98-138)||(2514634-2514674)
chr6 (100-132)||(32513759-32513791)
[»] chr1 (28 HSPs)
chr1 (98-138)||(27140417-27140457)
chr1 (94-138)||(37818392-37818436)
chr1 (99-138)||(15360827-15360866)
chr1 (97-138)||(4202227-4202268)
chr1 (97-138)||(13037795-13037836)
chr1 (97-138)||(16982034-16982075)
chr1 (97-138)||(37593767-37593808)
chr1 (98-138)||(4200161-4200201)
chr1 (102-138)||(49517006-49517042)
chr1 (97-136)||(26679205-26679244)
chr1 (98-141)||(45327539-45327582)
chr1 (99-133)||(24146362-24146396)
chr1 (108-138)||(49557083-49557113)
chr1 (105-181)||(50319231-50319306)
chr1 (97-138)||(6981423-6981464)
chr1 (97-130)||(20713587-20713620)
chr1 (105-138)||(23895275-23895308)
chr1 (105-142)||(29007810-29007847)
chr1 (97-138)||(29046011-29046052)
chr1 (101-138)||(33339518-33339555)
chr1 (105-138)||(36641814-36641847)
chr1 (97-138)||(45769841-45769882)
chr1 (105-137)||(172676-172708)
chr1 (105-137)||(6976887-6976919)
chr1 (97-133)||(17269181-17269217)
chr1 (98-138)||(38651507-38651547)
chr1 (97-137)||(45999387-45999427)
chr1 (102-138)||(48830174-48830210)
[»] scaffold0590 (1 HSPs)
scaffold0590 (97-138)||(1172-1213)
[»] scaffold0275 (1 HSPs)
scaffold0275 (97-138)||(2762-2803)
[»] scaffold0100 (1 HSPs)
scaffold0100 (97-138)||(42548-42589)
[»] scaffold0024 (1 HSPs)
scaffold0024 (98-138)||(27508-27548)
[»] scaffold0508 (1 HSPs)
scaffold0508 (105-138)||(9873-9906)
[»] scaffold0019 (1 HSPs)
scaffold0019 (105-138)||(104232-104265)


Alignment Details
Target: chr8 (Bit Score: 211; Significance: 1e-115; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 182 - 425
Target Start/End: Original strand, 9928320 - 9928563
Alignment:
Q  182 taaatcacacatctacctataattttacagattataagattacaattgattgatcaaaacaaattaaatttccaaggcaacnnnnnnncatgaaaaggaa 281  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||       ||||||||||||    
T  9928320 taaatcacacatctacctataattttacagattataagattacaattcattgatcaaaacaaattaaatttccaaggcaacaaaaaaacatgaaaaggaa 9928419  T
Q  282 gctttctttacttacatggtgtttcagaagcaaggatagaaaaatcttcagaacaagaattaagctcattttcttttacttgtgaaggtagattcttatc 381  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||    
T  9928420 gctttctttacttacatggtgtttcagaagcaaggatagaaaaatcttcagaacaagaaataagctcattttcttttacttgtgaaggtaaattcttatc 9928519  T
Q  382 tttgccaacttctgaggatccatccataatattttctgctacct 425  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  9928520 tttgccaacttctgaggatccatccataatattttctgctacct 9928563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 17 - 188
Target Start/End: Original strand, 9928107 - 9928278
Alignment:
Q  17 agaaaagatcttcaaaacaatgtacactattcatatacaattggttgcaaaaatgaaaggaaccatgtttgtagcagcaaataagtgtttatgtataagt 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9928107 agaaaagatcttcaaaacaatgtacactattcatatacaattggttgcaaaaatgaaaggaaccatgtttgtagcagcaaataagtgtttatgtataagt 9928206  T
Q  117 tatttctataacaaaagataaattaagccataatctgttttcataagctatcctatagaacttattaaatca 188  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9928207 tatttctataacaaaagataaattaagccataatctgttttcataagctatcctatagaacttattaaatca 9928278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 96 - 138
Target Start/End: Original strand, 32506987 - 32507029
Alignment:
Q  96 aataagtgtttatgtataagttatttctataacaaaagataaa 138  Q
    ||||||||||||||||||||||||||||| |||||||||||||    
T  32506987 aataagtgtttatgtataagttatttctacaacaaaagataaa 32507029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 92 - 138
Target Start/End: Complemental strand, 11188299 - 11188253
Alignment:
Q  92 agcaaataagtgtttatgtataagttatttctataacaaaagataaa 138  Q
    |||| ||||||| ||||||||||||| ||||||||||||||||||||    
T  11188299 agcatataagtgcttatgtataagttgtttctataacaaaagataaa 11188253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 92 - 138
Target Start/End: Complemental strand, 43812502 - 43812456
Alignment:
Q  92 agcaaataagtgtttatgtataagttatttctataacaaaagataaa 138  Q
    |||| |||||||||||||||||  |||||||||||||||||||||||    
T  43812502 agcatataagtgtttatgtatagtttatttctataacaaaagataaa 43812456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 97 - 138
Target Start/End: Original strand, 1561210 - 1561251
Alignment:
Q  97 ataagtgtttatgtataagttatttctataacaaaagataaa 138  Q
    ||||||| |||||||||||||||||||||||| |||||||||    
T  1561210 ataagtgcttatgtataagttatttctataacgaaagataaa 1561251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 97 - 138
Target Start/End: Original strand, 3945205 - 3945246
Alignment:
Q  97 ataagtgtttatgtataagttatttctataacaaaagataaa 138  Q
    |||||||||||| ||||||||||||| |||||||||||||||    
T  3945205 ataagtgtttatatataagttatttcaataacaaaagataaa 3945246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 97 - 138
Target Start/End: Complemental strand, 40728557 - 40728516
Alignment:
Q  97 ataagtgtttatgtataagttatttctataacaaaagataaa 138  Q
    ||||||||| ||| ||||||||||||||||||||||||||||    
T  40728557 ataagtgttcatgcataagttatttctataacaaaagataaa 40728516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 138
Target Start/End: Original strand, 4558730 - 4558770
Alignment:
Q  98 taagtgtttatgtataagttatttctataacaaaagataaa 138  Q
    |||||||||||||||||| ||||||||||| ||||||||||    
T  4558730 taagtgtttatgtataagctatttctataataaaagataaa 4558770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 138
Target Start/End: Original strand, 10939343 - 10939379
Alignment:
Q  102 tgtttatgtataagttatttctataacaaaagataaa 138  Q
    |||||||||||||||||||||||| ||||||||||||    
T  10939343 tgtttatgtataagttatttctattacaaaagataaa 10939379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 97 - 143
Target Start/End: Original strand, 10114421 - 10114467
Alignment:
Q  97 ataagtgtttatgtataagttatttctataacaaaagataaattaag 143  Q
    ||||||| ||||||||||| |||||||||| ||||||||||| ||||    
T  10114421 ataagtgcttatgtataagctatttctatagcaaaagataaaataag 10114467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 97 - 134
Target Start/End: Original strand, 1433476 - 1433513
Alignment:
Q  97 ataagtgtttatgtataagttatttctataacaaaaga 134  Q
    ||||||| ||||||||||||||||||||||| ||||||    
T  1433476 ataagtggttatgtataagttatttctataataaaaga 1433513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 97 - 138
Target Start/End: Original strand, 4763849 - 4763890
Alignment:
Q  97 ataagtgtttatgtataagttatttctataacaaaagataaa 138  Q
    ||||||||||||| |||||||||||| | |||||||||||||    
T  4763849 ataagtgtttatgcataagttatttcgacaacaaaagataaa 4763890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 101 - 134
Target Start/End: Complemental strand, 10062262 - 10062229
Alignment:
Q  101 gtgtttatgtataagttatttctataacaaaaga 134  Q
    |||||||||||||||||||||||||| |||||||    
T  10062262 gtgtttatgtataagttatttctataccaaaaga 10062229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 97 - 138
Target Start/End: Original strand, 14482133 - 14482174
Alignment:
Q  97 ataagtgtttatgtataagttatttctataacaaaagataaa 138  Q
    ||||||| ||||||||||  ||||||||||||||||||||||    
T  14482133 ataagtgcttatgtataaactatttctataacaaaagataaa 14482174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 97 - 138
Target Start/End: Original strand, 26056016 - 26056057
Alignment:
Q  97 ataagtgtttatgtataagttatttctataacaaaagataaa 138  Q
    ||||||||||||||||||| || ||||| |||||||||||||    
T  26056016 ataagtgtttatgtataagctaattctaaaacaaaagataaa 26056057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 105 - 138
Target Start/End: Original strand, 26215435 - 26215468
Alignment:
Q  105 ttatgtataagttatttctataacaaaagataaa 138  Q
    ||||||||||| ||||||||||||||||||||||    
T  26215435 ttatgtataagctatttctataacaaaagataaa 26215468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 138
Target Start/End: Original strand, 26820142 - 26820171
Alignment:
Q  109 gtataagttatttctataacaaaagataaa 138  Q
    ||||||||||||||||||||||||||||||    
T  26820142 gtataagttatttctataacaaaagataaa 26820171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 105 - 138
Target Start/End: Original strand, 29699193 - 29699226
Alignment:
Q  105 ttatgtataagttatttctataacaaaagataaa 138  Q
    ||||||| ||||||||||||||||||||||||||    
T  29699193 ttatgtacaagttatttctataacaaaagataaa 29699226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 110 - 139
Target Start/End: Original strand, 33522430 - 33522459
Alignment:
Q  110 tataagttatttctataacaaaagataaat 139  Q
    ||||||||||||||||||||||||||||||    
T  33522430 tataagttatttctataacaaaagataaat 33522459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 97 - 138
Target Start/End: Original strand, 38561657 - 38561698
Alignment:
Q  97 ataagtgtttatgtataagttatttctataacaaaagataaa 138  Q
    |||||||| ||| |||||||||||| ||||||||||||||||    
T  38561657 ataagtgtctatatataagttatttatataacaaaagataaa 38561698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 97 - 138
Target Start/End: Original strand, 38874577 - 38874618
Alignment:
Q  97 ataagtgtttatgtataagttatttctataacaaaagataaa 138  Q
    ||||||||||||||||||||| ||||| |||| |||||||||    
T  38874577 ataagtgtttatgtataagttgtttctgtaactaaagataaa 38874618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 105 - 138
Target Start/End: Original strand, 42597340 - 42597373
Alignment:
Q  105 ttatgtataagttatttctataacaaaagataaa 138  Q
    ||||||||||| ||||||||||||||||||||||    
T  42597340 ttatgtataagctatttctataacaaaagataaa 42597373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 99 - 143
Target Start/End: Original strand, 1112786 - 1112830
Alignment:
Q  99 aagtgtttatgtataagttatttctataacaaaagataaattaag 143  Q
    ||||| ||||||||| | |||||||||||||||||||||| ||||    
T  1112786 aagtgcttatgtatatgctatttctataacaaaagataaaataag 1112830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 106 - 138
Target Start/End: Original strand, 31884534 - 31884566
Alignment:
Q  106 tatgtataagttatttctataacaaaagataaa 138  Q
    ||||||||||||||||||||||||||| |||||    
T  31884534 tatgtataagttatttctataacaaaatataaa 31884566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 45; Significance: 2e-16; HSPs: 27)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 98 - 181
Target Start/End: Complemental strand, 51044597 - 51044514
Alignment:
Q  98 taagtgtttatgtataagttatttctataacaaaagataaattaa-gccataatctgttttcataagctatcctatagaacttat 181  Q
    |||||||||||||||||| |||||||||||||||||||||| ||| | || | | |||||||||||||||||||| |||||||||    
T  51044597 taagtgtttatgtataagctatttctataacaaaagataaaataaagtcaaact-tgttttcataagctatcctagagaacttat 51044514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 99 - 170
Target Start/End: Complemental strand, 21043351 - 21043280
Alignment:
Q  99 aagtgtttatgtataagttatttcta-taacaaaagataaatta-agccataatctgttttcataagctatcct 170  Q
    |||||||| ||||||||||||||||| ||||||||||||||||| ||   ||| ||||||||||||||||||||    
T  21043351 aagtgtttgtgtataagttatttctattaacaaaagataaattatag--ttaaactgttttcataagctatcct 21043280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 97 - 138
Target Start/End: Original strand, 4191670 - 4191711
Alignment:
Q  97 ataagtgtttatgtataagttatttctataacaaaagataaa 138  Q
    ||||||| ||||||||||| ||||||||||||||||||||||    
T  4191670 ataagtgcttatgtataagctatttctataacaaaagataaa 4191711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 97 - 138
Target Start/End: Original strand, 24936241 - 24936282
Alignment:
Q  97 ataagtgtttatgtataagttatttctataacaaaagataaa 138  Q
    ||||||| |||||||||||||||||||||||||||| |||||    
T  24936241 ataagtggttatgtataagttatttctataacaaaatataaa 24936282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 97 - 138
Target Start/End: Original strand, 28623220 - 28623261
Alignment:
Q  97 ataagtgtttatgtataagttatttctataacaaaagataaa 138  Q
    ||||||| ||||||||||||||||| ||||||||||||||||    
T  28623220 ataagtgcttatgtataagttatttatataacaaaagataaa 28623261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 97 - 138
Target Start/End: Complemental strand, 42641772 - 42641731
Alignment:
Q  97 ataagtgtttatgtataagttatttctataacaaaagataaa 138  Q
    ||||||||||||||||||| |||||| |||||||||||||||    
T  42641772 ataagtgtttatgtataagctatttccataacaaaagataaa 42641731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 97 - 138
Target Start/End: Original strand, 47970249 - 47970290
Alignment:
Q  97 ataagtgtttatgtataagttatttctataacaaaagataaa 138  Q
    ||||||| ||||||||||| ||||||||||||||||||||||    
T  47970249 ataagtgcttatgtataagctatttctataacaaaagataaa 47970290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 104 - 135
Target Start/End: Complemental strand, 3176254 - 3176223
Alignment:
Q  104 tttatgtataagttatttctataacaaaagat 135  Q
    ||||||||||||||||||||||||||||||||    
T  3176254 tttatgtataagttatttctataacaaaagat 3176223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 105 - 136
Target Start/End: Original strand, 19422357 - 19422388
Alignment:
Q  105 ttatgtataagttatttctataacaaaagata 136  Q
    ||||||||||||||||||||||||||||||||    
T  19422357 ttatgtataagttatttctataacaaaagata 19422388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 98 - 137
Target Start/End: Complemental strand, 21683617 - 21683578
Alignment:
Q  98 taagtgtttatgtataagttatttctataacaaaagataa 137  Q
    |||||||||||||||||  |||||||||||||||||||||    
T  21683617 taagtgtttatgtataaactatttctataacaaaagataa 21683578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 95 - 138
Target Start/End: Original strand, 21952504 - 21952547
Alignment:
Q  95 aaataagtgtttatgtataagttatttctataacaaaagataaa 138  Q
    ||||||||||||||| ||||| ||||||||||||||||| ||||    
T  21952504 aaataagtgtttatgcataagctatttctataacaaaaggtaaa 21952547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 103 - 138
Target Start/End: Complemental strand, 44119295 - 44119260
Alignment:
Q  103 gtttatgtataagttatttctataacaaaagataaa 138  Q
    |||||||||||||||||||||||| |||||||||||    
T  44119295 gtttatgtataagttatttctatagcaaaagataaa 44119260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 103 - 138
Target Start/End: Complemental strand, 52645882 - 52645847
Alignment:
Q  103 gtttatgtataagttatttctataacaaaagataaa 138  Q
    ||||||||||||| ||||||||||||||||||||||    
T  52645882 gtttatgtataagctatttctataacaaaagataaa 52645847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 97 - 131
Target Start/End: Complemental strand, 4663835 - 4663801
Alignment:
Q  97 ataagtgtttatgtataagttatttctataacaaa 131  Q
    ||||||| |||||||||||||||||||||||||||    
T  4663835 ataagtgcttatgtataagttatttctataacaaa 4663801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 105 - 138
Target Start/End: Original strand, 6364088 - 6364121
Alignment:
Q  105 ttatgtataagttatttctataacaaaagataaa 138  Q
    ||||||||||| ||||||||||||||||||||||    
T  6364088 ttatgtataagctatttctataacaaaagataaa 6364121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 97 - 138
Target Start/End: Original strand, 11389457 - 11389498
Alignment:
Q  97 ataagtgtttatgtataagttatttctataacaaaagataaa 138  Q
    ||||||| |||||||||| |||||||||||| ||||||||||    
T  11389457 ataagtgcttatgtataaattatttctataaaaaaagataaa 11389498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 97 - 138
Target Start/End: Original strand, 20907104 - 20907145
Alignment:
Q  97 ataagtgtttatgtataagttatttctataacaaaagataaa 138  Q
    ||||||||||||||||||| ||||| ||||| ||||||||||    
T  20907104 ataagtgtttatgtataagctatttgtataagaaaagataaa 20907145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 97 - 126
Target Start/End: Complemental strand, 27321970 - 27321941
Alignment:
Q  97 ataagtgtttatgtataagttatttctata 126  Q
    ||||||||||||||||||||||||||||||    
T  27321970 ataagtgtttatgtataagttatttctata 27321941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 105 - 138
Target Start/End: Original strand, 30024639 - 30024672
Alignment:
Q  105 ttatgtataagttatttctataacaaaagataaa 138  Q
    ||||| ||||||||||||||||||||||||||||    
T  30024639 ttatgcataagttatttctataacaaaagataaa 30024672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 101 - 138
Target Start/End: Original strand, 35743239 - 35743276
Alignment:
Q  101 gtgtttatgtataagttatttctataacaaaagataaa 138  Q
    ||||| ||||| ||||||||||||||||||||||||||    
T  35743239 gtgttgatgtacaagttatttctataacaaaagataaa 35743276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 97 - 142
Target Start/End: Original strand, 36048731 - 36048775
Alignment:
Q  97 ataagtgtttatgtataagttatttctataacaaaagataaattaa 142  Q
    ||||||| |||| |||||| ||||||||||||||||||||||||||    
T  36048731 ataagtgcttat-tataagctatttctataacaaaagataaattaa 36048775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 105 - 138
Target Start/End: Original strand, 44249225 - 44249258
Alignment:
Q  105 ttatgtataagttatttctataacaaaagataaa 138  Q
    |||||||||||||||||| |||||||||||||||    
T  44249225 ttatgtataagttatttcaataacaaaagataaa 44249258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 97 - 138
Target Start/End: Complemental strand, 46176145 - 46176104
Alignment:
Q  97 ataagtgtttatgtataagttatttctataacaaaagataaa 138  Q
    ||||||| ||||  ||||||||||||||||||||||||||||    
T  46176145 ataagtgcttatacataagttatttctataacaaaagataaa 46176104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 98 - 138
Target Start/End: Complemental strand, 4798697 - 4798657
Alignment:
Q  98 taagtgtttatgtataagttatttctataacaaaagataaa 138  Q
    |||||| ||||||||||| |||||||||| |||||||||||    
T  4798697 taagtgcttatgtataagctatttctatatcaaaagataaa 4798657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 99 - 131
Target Start/End: Original strand, 23819023 - 23819055
Alignment:
Q  99 aagtgtttatgtataagttatttctataacaaa 131  Q
    |||||||||||||||||||||||| ||||||||    
T  23819023 aagtgtttatgtataagttatttccataacaaa 23819055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 141 - 181
Target Start/End: Complemental strand, 29601082 - 29601042
Alignment:
Q  141 aagccataatctgttttcataagctatcctatagaacttat 181  Q
    |||| |||||||||||||||| ||||||||| |||||||||    
T  29601082 aagctataatctgttttcatatgctatcctagagaacttat 29601042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 106 - 138
Target Start/End: Original strand, 49803151 - 49803183
Alignment:
Q  106 tatgtataagttatttctataacaaaagataaa 138  Q
    ||||||||||||||||||||| |||||||||||    
T  49803151 tatgtataagttatttctatagcaaaagataaa 49803183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 94 - 138
Target Start/End: Original strand, 38033896 - 38033940
Alignment:
Q  94 caaataagtgtttatgtataagttatttctataacaaaagataaa 138  Q
    |||||||||||||||||||||||||||| ||||||||||||||||    
T  38033896 caaataagtgtttatgtataagttatttatataacaaaagataaa 38033940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 97 - 138
Target Start/End: Complemental strand, 35135801 - 35135760
Alignment:
Q  97 ataagtgtttatgtataagttatttctataacaaaagataaa 138  Q
    ||||||||||||||||||| ||||||||||||||||||||||    
T  35135801 ataagtgtttatgtataagatatttctataacaaaagataaa 35135760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 105 - 139
Target Start/End: Complemental strand, 18704166 - 18704132
Alignment:
Q  105 ttatgtataagttatttctataacaaaagataaat 139  Q
    |||||||||||||||||||||||||||||||||||    
T  18704166 ttatgtataagttatttctataacaaaagataaat 18704132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 97 - 138
Target Start/End: Complemental strand, 40048419 - 40048378
Alignment:
Q  97 ataagtgtttatgtataagttatttctataacaaaagataaa 138  Q
    ||||||| ||||||||||||| ||||||||||||||||||||    
T  40048419 ataagtgcttatgtataagttgtttctataacaaaagataaa 40048378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 142
Target Start/End: Original strand, 31208405 - 31208449
Alignment:
Q  98 taagtgtttatgtataagttatttctataacaaaagataaattaa 142  Q
    |||||| ||||| |||||||||||||||||||||| |||||||||    
T  31208405 taagtgcttatgcataagttatttctataacaaaatataaattaa 31208449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 99 - 138
Target Start/End: Complemental strand, 7096264 - 7096225
Alignment:
Q  99 aagtgtttatgtataagttatttctataacaaaagataaa 138  Q
    ||||| ||||||||||| ||||||||||||||||||||||    
T  7096264 aagtgcttatgtataagctatttctataacaaaagataaa 7096225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 105 - 140
Target Start/End: Original strand, 8089242 - 8089277
Alignment:
Q  105 ttatgtataagttatttctataacaaaagataaatt 140  Q
    ||||||||||||||||||||||||||||| ||||||    
T  8089242 ttatgtataagttatttctataacaaaagttaaatt 8089277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 99 - 138
Target Start/End: Original strand, 13224362 - 13224401
Alignment:
Q  99 aagtgtttatgtataagttatttctataacaaaagataaa 138  Q
    ||||| ||||||||||| ||||||||||||||||||||||    
T  13224362 aagtgcttatgtataagctatttctataacaaaagataaa 13224401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 100 - 143
Target Start/End: Complemental strand, 34117669 - 34117626
Alignment:
Q  100 agtgtttatgtataagttatttctataacaaaagataaattaag 143  Q
    |||| ||||||||||||||||||| |||||||||||||| ||||    
T  34117669 agtgcttatgtataagttatttctttaacaaaagataaaataag 34117626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 96 - 126
Target Start/End: Original strand, 10907309 - 10907339
Alignment:
Q  96 aataagtgtttatgtataagttatttctata 126  Q
    |||||||||||||||||||||||||||||||    
T  10907309 aataagtgtttatgtataagttatttctata 10907339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 105 - 143
Target Start/End: Complemental strand, 12460131 - 12460093
Alignment:
Q  105 ttatgtataagttatttctataacaaaagataaattaag 143  Q
    ||||||||||| |||||||||||||||||||||| ||||    
T  12460131 ttatgtataagctatttctataacaaaagataaaataag 12460093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 96 - 134
Target Start/End: Complemental strand, 33459075 - 33459037
Alignment:
Q  96 aataagtgtttatgtataagttatttctataacaaaaga 134  Q
    ||||| || ||||||||||||||||||||||||||||||    
T  33459075 aataaatgcttatgtataagttatttctataacaaaaga 33459037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 105 - 138
Target Start/End: Complemental strand, 1773556 - 1773523
Alignment:
Q  105 ttatgtataagttatttctataacaaaagataaa 138  Q
    ||||||||||| ||||||||||||||||||||||    
T  1773556 ttatgtataagctatttctataacaaaagataaa 1773523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 105 - 138
Target Start/End: Complemental strand, 12407792 - 12407759
Alignment:
Q  105 ttatgtataagttatttctataacaaaagataaa 138  Q
    ||||||||||| ||||||||||||||||||||||    
T  12407792 ttatgtataagctatttctataacaaaagataaa 12407759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 97 - 138
Target Start/End: Complemental strand, 14714978 - 14714937
Alignment:
Q  97 ataagtgtttatgtataagttatttctataacaaaagataaa 138  Q
    ||||||| ||||||||||| |||||||||||||||| |||||    
T  14714978 ataagtgattatgtataagctatttctataacaaaacataaa 14714937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 97 - 138
Target Start/End: Complemental strand, 20982274 - 20982233
Alignment:
Q  97 ataagtgtttatgtataagttatttctataacaaaagataaa 138  Q
    ||||||| ||||||||||| ||||||||||||||| ||||||    
T  20982274 ataagtgcttatgtataagctatttctataacaaaggataaa 20982233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 97 - 138
Target Start/End: Original strand, 26516229 - 26516270
Alignment:
Q  97 ataagtgtttatgtataagttatttctataacaaaagataaa 138  Q
    ||||||| ||||||||||| |||||||| |||||||||||||    
T  26516229 ataagtgcttatgtataagctatttctaaaacaaaagataaa 26516270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 97 - 138
Target Start/End: Complemental strand, 27106062 - 27106021
Alignment:
Q  97 ataagtgtttatgtataagttatttctataacaaaagataaa 138  Q
    ||||||| ||| |||||||| |||||||||||||||||||||    
T  27106062 ataagtgcttacgtataagtcatttctataacaaaagataaa 27106021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 105 - 138
Target Start/End: Complemental strand, 29117061 - 29117028
Alignment:
Q  105 ttatgtataagttatttctataacaaaagataaa 138  Q
    ||||||||| ||||||||||||||||||||||||    
T  29117061 ttatgtatatgttatttctataacaaaagataaa 29117028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 97 - 138
Target Start/End: Original strand, 29588811 - 29588852
Alignment:
Q  97 ataagtgtttatgtataagttatttctataacaaaagataaa 138  Q
    ||||||| ||||||||||| |||||||||||||||| |||||    
T  29588811 ataagtgcttatgtataagctatttctataacaaaatataaa 29588852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 97 - 138
Target Start/End: Complemental strand, 40097542 - 40097501
Alignment:
Q  97 ataagtgtttatgtataagttatttctataacaaaagataaa 138  Q
    |||||||  |||||||||||||||||||||||| ||||||||    
T  40097542 ataagtgcgtatgtataagttatttctataacagaagataaa 40097501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 97 - 138
Target Start/End: Complemental strand, 40499814 - 40499773
Alignment:
Q  97 ataagtgtttatgtataagttatttctataacaaaagataaa 138  Q
    ||||||| ||||||| ||||||||||||||||||| ||||||    
T  40499814 ataagtgcttatgtacaagttatttctataacaaatgataaa 40499773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 97 - 137
Target Start/End: Complemental strand, 4991082 - 4991042
Alignment:
Q  97 ataagtgtttatgtataagttatttctataacaaaagataa 137  Q
    |||||||||| |||||||| ||||| |||||||||||||||    
T  4991082 ataagtgtttgtgtataagctatttttataacaaaagataa 4991042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 98 - 138
Target Start/End: Original strand, 9927517 - 9927557
Alignment:
Q  98 taagtgtttatgtataagttatttctataacaaaagataaa 138  Q
    |||||||||||||||||||||||| ||||  ||||||||||    
T  9927517 taagtgtttatgtataagttatttgtatagtaaaagataaa 9927557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 98 - 138
Target Start/End: Original strand, 13508464 - 13508504
Alignment:
Q  98 taagtgtttatgtataagttatttctataacaaaagataaa 138  Q
    ||||||||||||| |||| ||||||||||||||||| ||||    
T  13508464 taagtgtttatgtttaagctatttctataacaaaagctaaa 13508504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 98 - 138
Target Start/End: Complemental strand, 21782707 - 21782667
Alignment:
Q  98 taagtgtttatgtataagttatttctataacaaaagataaa 138  Q
    ||||||||||||| |||| ||||||||||||||||| ||||    
T  21782707 taagtgtttatgtttaagctatttctataacaaaagctaaa 21782667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 98 - 181
Target Start/End: Complemental strand, 12985459 - 12985379
Alignment:
Q  98 taagtgtttatgtataagttatttctataacaaaagataaattaagccataatctgttttcataagctatcctatagaacttat 181  Q
    |||||||||||||||||||| |||||||||||||| | |||| |||  |||| ||||||||||||||||||||  |||||||||    
T  12985459 taagtgtttatgtataagttgtttctataacaaaata-aaataaag--ataaactgttttcataagctatcctcaagaacttat 12985379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 98 - 135
Target Start/End: Complemental strand, 24605154 - 24605117
Alignment:
Q  98 taagtgtttatgtataagttatttctataacaaaagat 135  Q
    ||||||||||||||||||||||||||||||||||||||    
T  24605154 taagtgtttatgtataagttatttctataacaaaagat 24605117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 97 - 143
Target Start/End: Complemental strand, 20174027 - 20173981
Alignment:
Q  97 ataagtgtttatgtataagttatttctataacaaaagataaattaag 143  Q
    ||||||| |||||||| ||||||||||||||||||||||||| ||||    
T  20174027 ataagtgcttatgtattagttatttctataacaaaagataaaataag 20173981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 97 - 138
Target Start/End: Complemental strand, 2128390 - 2128349
Alignment:
Q  97 ataagtgtttatgtataagttatttctataacaaaagataaa 138  Q
    ||||| ||||||||||||| ||||||||||||||||||||||    
T  2128390 ataagcgtttatgtataagctatttctataacaaaagataaa 2128349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 97 - 138
Target Start/End: Complemental strand, 16790227 - 16790186
Alignment:
Q  97 ataagtgtttatgtataagttatttctataacaaaagataaa 138  Q
    ||||||| |||| |||||||||||||||||||||||||||||    
T  16790227 ataagtgcttatatataagttatttctataacaaaagataaa 16790186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 102 - 139
Target Start/End: Original strand, 32663578 - 32663615
Alignment:
Q  102 tgtttatgtataagttatttctataacaaaagataaat 139  Q
    |||||||| |||||||||||||||||||||||||||||    
T  32663578 tgtttatgcataagttatttctataacaaaagataaat 32663615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 107 - 138
Target Start/End: Original strand, 36887463 - 36887494
Alignment:
Q  107 atgtataagttatttctataacaaaagataaa 138  Q
    ||||||||||||||||||||||||||||||||    
T  36887463 atgtataagttatttctataacaaaagataaa 36887494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 99 - 138
Target Start/End: Original strand, 37788794 - 37788832
Alignment:
Q  99 aagtgtttatgtataagttatttctataacaaaagataaa 138  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  37788794 aagtgtttatgtataagttattt-tataacaaaagataaa 37788832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 99 - 138
Target Start/End: Complemental strand, 43116565 - 43116526
Alignment:
Q  99 aagtgtttatgtataagttatttctataacaaaagataaa 138  Q
    |||||||||||| |||| ||||||||||||||||||||||    
T  43116565 aagtgtttatgtgtaagctatttctataacaaaagataaa 43116526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 97 - 131
Target Start/End: Complemental strand, 24158641 - 24158607
Alignment:
Q  97 ataagtgtttatgtataagttatttctataacaaa 131  Q
    ||||||| |||||||||||||||||||||||||||    
T  24158641 ataagtgcttatgtataagttatttctataacaaa 24158607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 97 - 139
Target Start/End: Complemental strand, 28283716 - 28283674
Alignment:
Q  97 ataagtgtttatgtataagttatttctataacaaaagataaat 139  Q
    ||||||| ||||| |||||||| ||||||||||||||||||||    
T  28283716 ataagtgcttatgcataagttacttctataacaaaagataaat 28283674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 97 - 138
Target Start/End: Original strand, 2070986 - 2071027
Alignment:
Q  97 ataagtgtttatgtataagttatttctataacaaaagataaa 138  Q
    ||||||||| ||||||||| ||||||| ||||||||||||||    
T  2070986 ataagtgttaatgtataagctatttctttaacaaaagataaa 2071027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 97 - 138
Target Start/End: Complemental strand, 2304380 - 2304339
Alignment:
Q  97 ataagtgtttatgtataagttatttctataacaaaagataaa 138  Q
    ||||||| ||||||||||| ||||||||||| ||||||||||    
T  2304380 ataagtgattatgtataagctatttctataataaaagataaa 2304339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 97 - 138
Target Start/End: Complemental strand, 8142849 - 8142808
Alignment:
Q  97 ataagtgtttatgtataagttatttctataacaaaagataaa 138  Q
    ||||||||||||||||||| ||||| |||| |||||||||||    
T  8142849 ataagtgtttatgtataagctatttttatatcaaaagataaa 8142808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 108 - 137
Target Start/End: Complemental strand, 24235811 - 24235782
Alignment:
Q  108 tgtataagttatttctataacaaaagataa 137  Q
    ||||||||||||||||||||||||||||||    
T  24235811 tgtataagttatttctataacaaaagataa 24235782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 97 - 138
Target Start/End: Original strand, 38462212 - 38462253
Alignment:
Q  97 ataagtgtttatgtataagttatttctataacaaaagataaa 138  Q
    |||||||||||| |||||| |||||||||| |||||||||||    
T  38462212 ataagtgtttatttataagctatttctataccaaaagataaa 38462253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 97 - 138
Target Start/End: Original strand, 39743836 - 39743877
Alignment:
Q  97 ataagtgtttatgtataagttatttctataacaaaagataaa 138  Q
    |||| ||||||||||||||||||||| ||||||||| |||||    
T  39743836 ataattgtttatgtataagttatttcaataacaaaatataaa 39743877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 97 - 138
Target Start/End: Original strand, 39971250 - 39971291
Alignment:
Q  97 ataagtgtttatgtataagttatttctataacaaaagataaa 138  Q
    ||||||| |||||||||||||| || ||||||||||||||||    
T  39971250 ataagtgcttatgtataagttacttatataacaaaagataaa 39971291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 97 - 134
Target Start/End: Complemental strand, 41028990 - 41028953
Alignment:
Q  97 ataagtgtttatgtataagttatttctataacaaaaga 134  Q
    ||||||| ||||||||||| ||||||||||||||||||    
T  41028990 ataagtgcttatgtataagctatttctataacaaaaga 41028953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 97 - 138
Target Start/End: Original strand, 41159040 - 41159081
Alignment:
Q  97 ataagtgtttatgtataagttatttctataacaaaagataaa 138  Q
    ||||||| |||||||||||||||| ||||||| |||||||||    
T  41159040 ataagtgcttatgtataagttattcctataactaaagataaa 41159081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 97 - 138
Target Start/End: Complemental strand, 42084390 - 42084349
Alignment:
Q  97 ataagtgtttatgtataagttatttctataacaaaagataaa 138  Q
    |||||||| |||||||||| ||||||||||||||| ||||||    
T  42084390 ataagtgtctatgtataagctatttctataacaaaggataaa 42084349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 105 - 138
Target Start/End: Complemental strand, 48365010 - 48364977
Alignment:
Q  105 ttatgtataagttatttctataacaaaagataaa 138  Q
    |||||||||||||||||| |||||||||||||||    
T  48365010 ttatgtataagttatttcgataacaaaagataaa 48364977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 98 - 143
Target Start/End: Complemental strand, 48597727 - 48597682
Alignment:
Q  98 taagtgtttatgtataagttatttctataacaaaagataaattaag 143  Q
    |||||| |||||| |||  |||||||||||||||||||||||||||    
T  48597727 taagtgcttatgtttaaactatttctataacaaaagataaattaag 48597682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 106 - 138
Target Start/End: Original strand, 1395611 - 1395643
Alignment:
Q  106 tatgtataagttatttctataacaaaagataaa 138  Q
    |||||||||| ||||||||||||||||||||||    
T  1395611 tatgtataagctatttctataacaaaagataaa 1395643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 98 - 126
Target Start/End: Original strand, 1809945 - 1809973
Alignment:
Q  98 taagtgtttatgtataagttatttctata 126  Q
    |||||||||||||||||||||||||||||    
T  1809945 taagtgtttatgtataagttatttctata 1809973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 98 - 138
Target Start/End: Original strand, 2153614 - 2153654
Alignment:
Q  98 taagtgtttatgtataagttatttctataacaaaagataaa 138  Q
    |||||||||||||||||||||  | ||||||||||||||||    
T  2153614 taagtgtttatgtataagttacgtgtataacaaaagataaa 2153654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 98 - 138
Target Start/End: Complemental strand, 3182500 - 3182460
Alignment:
Q  98 taagtgtttatgtataagttatttctataacaaaagataaa 138  Q
    ||||||||||||||||||||| |||||||  ||||||||||    
T  3182500 taagtgtttatgtataagttacttctatagaaaaagataaa 3182460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 98 - 138
Target Start/End: Complemental strand, 20192744 - 20192704
Alignment:
Q  98 taagtgtttatgtataagttatttctataacaaaagataaa 138  Q
    |||||| ||||||||||| ||||| ||||||||||||||||    
T  20192744 taagtgcttatgtataagctatttatataacaaaagataaa 20192704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 105 - 137
Target Start/End: Original strand, 23815992 - 23816024
Alignment:
Q  105 ttatgtataagttatttctataacaaaagataa 137  Q
    ||||||||||||||||||||||| |||||||||    
T  23815992 ttatgtataagttatttctataataaaagataa 23816024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 102 - 138
Target Start/End: Complemental strand, 30669104 - 30669068
Alignment:
Q  102 tgtttatgtataagttatttctataacaaaagataaa 138  Q
    |||||||||||||| ||||| ||||||||||||||||    
T  30669104 tgtttatgtataagctatttttataacaaaagataaa 30669068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 110 - 138
Target Start/End: Complemental strand, 32095317 - 32095289
Alignment:
Q  110 tataagttatttctataacaaaagataaa 138  Q
    |||||||||||||||||||||||||||||    
T  32095317 tataagttatttctataacaaaagataaa 32095289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 95 - 142
Target Start/End: Original strand, 2894746 - 2894793
Alignment:
Q  95 aaataagtgtttatgtataagttatttctataacaaaagataaattaa 142  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  2894746 aaataagtgttcatgtataagctatttctataacaaaagataaattaa 2894793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 97 - 138
Target Start/End: Original strand, 2223079 - 2223120
Alignment:
Q  97 ataagtgtttatgtataagttatttctataacaaaagataaa 138  Q
    ||||||||||||||||||| ||||||||||||||||||||||    
T  2223079 ataagtgtttatgtataagctatttctataacaaaagataaa 2223120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 97 - 142
Target Start/End: Complemental strand, 46223211 - 46223166
Alignment:
Q  97 ataagtgtttatgtataagttatttctataacaaaagataaattaa 142  Q
    ||||||||||||||||||| |||||| |||||||||||||||||||    
T  46223211 ataagtgtttatgtataagctatttccataacaaaagataaattaa 46223166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 99 - 138
Target Start/End: Complemental strand, 35809041 - 35809002
Alignment:
Q  99 aagtgtttatgtataagttatttctataacaaaagataaa 138  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  35809041 aagtgtttatgtataagctatttctataacaaaagataaa 35809002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 97 - 135
Target Start/End: Original strand, 25507282 - 25507320
Alignment:
Q  97 ataagtgtttatgtataagttatttctataacaaaagat 135  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  25507282 ataagtgtttatgtataagttatttctataccaaaagat 25507320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 97 - 135
Target Start/End: Complemental strand, 25558328 - 25558290
Alignment:
Q  97 ataagtgtttatgtataagttatttctataacaaaagat 135  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  25558328 ataagtgtttatgtataagttatttctataccaaaagat 25558290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 97 - 135
Target Start/End: Complemental strand, 25558526 - 25558488
Alignment:
Q  97 ataagtgtttatgtataagttatttctataacaaaagat 135  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  25558526 ataagtgtttatgtataagttatttctataccaaaagat 25558488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 105 - 138
Target Start/End: Complemental strand, 1432098 - 1432065
Alignment:
Q  105 ttatgtataagttatttctataacaaaagataaa 138  Q
    ||||||||||||||||||||||||||||||||||    
T  1432098 ttatgtataagttatttctataacaaaagataaa 1432065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 97 - 138
Target Start/End: Original strand, 4591473 - 4591514
Alignment:
Q  97 ataagtgtttatgtataagttatttctataacaaaagataaa 138  Q
    ||||||||||||||||||| ||| ||||||||||||||||||    
T  4591473 ataagtgtttatgtataagctatctctataacaaaagataaa 4591514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 97 - 138
Target Start/End: Complemental strand, 27481433 - 27481392
Alignment:
Q  97 ataagtgtttatgtataagttatttctataacaaaagataaa 138  Q
    ||||||||||||||||||| ||||||||||||||| ||||||    
T  27481433 ataagtgtttatgtataagctatttctataacaaaggataaa 27481392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 98 - 143
Target Start/End: Original strand, 33894555 - 33894600
Alignment:
Q  98 taagtgtttatgtataagttatttctataacaaaagataaattaag 143  Q
    |||||| ||||||||||| |||||||||||||||||||||| ||||    
T  33894555 taagtgcttatgtataagctatttctataacaaaagataaaataag 33894600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 97 - 138
Target Start/End: Original strand, 44241791 - 44241832
Alignment:
Q  97 ataagtgtttatgtataagttatttctataacaaaagataaa 138  Q
    |||||||| ||||||||||||||||||||||||| |||||||    
T  44241791 ataagtgtgtatgtataagttatttctataacaacagataaa 44241832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 138
Target Start/End: Original strand, 28165023 - 28165063
Alignment:
Q  98 taagtgtttatgtataagttatttctataacaaaagataaa 138  Q
    |||||| ||||||||||||| ||||||||||||||||||||    
T  28165023 taagtgcttatgtataagttctttctataacaaaagataaa 28165063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 132
Target Start/End: Original strand, 5939015 - 5939050
Alignment:
Q  97 ataagtgtttatgtataagttatttctataacaaaa 132  Q
    ||||||||||||||||||||||||| ||||||||||    
T  5939015 ataagtgtttatgtataagttatttttataacaaaa 5939050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 168
Target Start/End: Complemental strand, 6552409 - 6552339
Alignment:
Q  97 ataagtgtttatgtataagttatttctataacaaaagataaattaagccataatctgttttcataagctatc 168  Q
    ||||||| ||||||| |||||||||||| ||||||||||||| | ||| |||| || ||||||||| |||||    
T  6552409 ataagtgcttatgtacaagttatttctacaacaaaagataaaat-agctataaactattttcataaactatc 6552339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 104 - 138
Target Start/End: Original strand, 28702698 - 28702732
Alignment:
Q  104 tttatgtataagttatttctataacaaaagataaa 138  Q
    |||||||||||| ||||||||||||||||||||||    
T  28702698 tttatgtataagctatttctataacaaaagataaa 28702732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 105 - 138
Target Start/End: Original strand, 2013138 - 2013171
Alignment:
Q  105 ttatgtataagttatttctataacaaaagataaa 138  Q
    |||||||||| |||||||||||||||||||||||    
T  2013138 ttatgtataatttatttctataacaaaagataaa 2013171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 97 - 138
Target Start/End: Complemental strand, 3610879 - 3610838
Alignment:
Q  97 ataagtgtttatgtataagttatttctataacaaaagataaa 138  Q
    ||||||| ||||||||||| |||||||| |||||||||||||    
T  3610879 ataagtgcttatgtataagctatttctacaacaaaagataaa 3610838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 97 - 138
Target Start/End: Original strand, 7244633 - 7244674
Alignment:
Q  97 ataagtgtttatgtataagttatttctataacaaaagataaa 138  Q
    ||||||| ||||||||||| |||||||||| |||||||||||    
T  7244633 ataagtgcttatgtataagctatttctatatcaaaagataaa 7244674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 97 - 138
Target Start/End: Complemental strand, 21853255 - 21853214
Alignment:
Q  97 ataagtgtttatgtataagttatttctataacaaaagataaa 138  Q
    ||||||| |||| |||||||||||||||| ||||||||||||    
T  21853255 ataagtgattatatataagttatttctattacaaaagataaa 21853214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 97 - 138
Target Start/End: Original strand, 24973875 - 24973916
Alignment:
Q  97 ataagtgtttatgtataagttatttctataacaaaagataaa 138  Q
    ||||||| ||||||| ||| ||||||||||||||||||||||    
T  24973875 ataagtgcttatgtaaaagctatttctataacaaaagataaa 24973916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 97 - 138
Target Start/End: Original strand, 30133980 - 30134021
Alignment:
Q  97 ataagtgtttatgtataagttatttctataacaaaagataaa 138  Q
    ||||||||||||||||||| ||||| || |||||||||||||    
T  30133980 ataagtgtttatgtataagctatttttacaacaaaagataaa 30134021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 97 - 138
Target Start/End: Original strand, 30496635 - 30496676
Alignment:
Q  97 ataagtgtttatgtataagttatttctataacaaaagataaa 138  Q
    ||||||||||||||||||  |||||||||||||||| |||||    
T  30496635 ataagtgtttatgtataaactatttctataacaaaatataaa 30496676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 97 - 138
Target Start/End: Original strand, 49060471 - 49060512
Alignment:
Q  97 ataagtgtttatgtataagttatttctataacaaaagataaa 138  Q
    |||||| |||||||||||| |||||||||||||||| |||||    
T  49060471 ataagtatttatgtataagctatttctataacaaaaaataaa 49060512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 98 - 138
Target Start/End: Original strand, 5373157 - 5373197
Alignment:
Q  98 taagtgtttatgtataagttatttctataacaaaagataaa 138  Q
    |||||| ||||||||| | ||||||||||||||||||||||    
T  5373157 taagtgcttatgtatatgctatttctataacaaaagataaa 5373197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 94 - 138
Target Start/End: Complemental strand, 10079482 - 10079438
Alignment:
Q  94 caaataagtgtttatgtataagttatttctataacaaaagataaa 138  Q
    ||||||||| | |||||||||| || |||||||||||||||||||    
T  10079482 caaataagtttgtatgtataagctacttctataacaaaagataaa 10079438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 98 - 138
Target Start/End: Complemental strand, 22388042 - 22388002
Alignment:
Q  98 taagtgtttatgtataagttatttctataacaaaagataaa 138  Q
    |||||| ||||| ||||| ||||||||||||||||||||||    
T  22388042 taagtgcttatggataagctatttctataacaaaagataaa 22388002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 99 - 135
Target Start/End: Complemental strand, 38713164 - 38713128
Alignment:
Q  99 aagtgtttatgtataagttatttctataacaaaagat 135  Q
    ||||| || ||||||||||||||||||||||||||||    
T  38713164 aagtgattgtgtataagttatttctataacaaaagat 38713128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 110 - 138
Target Start/End: Complemental strand, 39591593 - 39591565
Alignment:
Q  110 tataagttatttctataacaaaagataaa 138  Q
    |||||||||||||||||||||||||||||    
T  39591593 tataagttatttctataacaaaagataaa 39591565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 96 - 138
Target Start/End: Original strand, 10143102 - 10143144
Alignment:
Q  96 aataagtgtttatgtataagttatttctataacaaaagataaa 138  Q
    |||||||| ||||||||||||||||||||||||||||||||||    
T  10143102 aataagtgcttatgtataagttatttctataacaaaagataaa 10143144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 97 - 138
Target Start/End: Original strand, 10150686 - 10150727
Alignment:
Q  97 ataagtgtttatgtataagttatttctataacaaaagataaa 138  Q
    ||||||||||||||||||||||||||||||| ||||||||||    
T  10150686 ataagtgtttatgtataagttatttctataataaaagataaa 10150727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 97 - 142
Target Start/End: Original strand, 15171181 - 15171226
Alignment:
Q  97 ataagtgtttatgtataagttatttctataacaaaagataaattaa 142  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||    
T  15171181 ataagtgtttatgtataagttttttctataacagaagataaattaa 15171226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 98 - 138
Target Start/End: Complemental strand, 38239689 - 38239649
Alignment:
Q  98 taagtgtttatgtataagttatttctataacaaaagataaa 138  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  38239689 taagtgtttatgtataagctatttctataacaaaagataaa 38239649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 97 - 138
Target Start/End: Original strand, 13864581 - 13864622
Alignment:
Q  97 ataagtgtttatgtataagttatttctataacaaaagataaa 138  Q
    ||||||||||||||||||| ||||||||||||||||| ||||    
T  13864581 ataagtgtttatgtataagctatttctataacaaaaggtaaa 13864622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 97 - 138
Target Start/End: Complemental strand, 43431583 - 43431542
Alignment:
Q  97 ataagtgtttatgtataagttatttctataacaaaagataaa 138  Q
    ||||||||| |||||||||||||||| |||||||||||||||    
T  43431583 ataagtgttaatgtataagttatttcaataacaaaagataaa 43431542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 138
Target Start/End: Complemental strand, 5045295 - 5045255
Alignment:
Q  98 taagtgtttatgtataagttatttctataacaaaagataaa 138  Q
    |||||||||||||||||| ||||| ||||||||||||||||    
T  5045295 taagtgtttatgtataagctatttttataacaaaagataaa 5045255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 135
Target Start/End: Original strand, 15173459 - 15173495
Alignment:
Q  99 aagtgtttatgtataagttatttctataacaaaagat 135  Q
    |||||| ||||||||||||||||||||||||||||||    
T  15173459 aagtgtctatgtataagttatttctataacaaaagat 15173495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 138
Target Start/End: Complemental strand, 41033088 - 41033048
Alignment:
Q  98 taagtgtttatgtataagttatttctataacaaaagataaa 138  Q
    |||||| ||||||||||| ||||||||||||||||||||||    
T  41033088 taagtgcttatgtataagctatttctataacaaaagataaa 41033048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 107 - 142
Target Start/End: Complemental strand, 40837557 - 40837522
Alignment:
Q  107 atgtataagttatttctataacaaaagataaattaa 142  Q
    ||||||||| ||||||||||||||||||||||||||    
T  40837557 atgtataagctatttctataacaaaagataaattaa 40837522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 100 - 134
Target Start/End: Complemental strand, 9875593 - 9875559
Alignment:
Q  100 agtgtttatgtataagttatttctataacaaaaga 134  Q
    ||||||||||||||||||||||||||| |||||||    
T  9875593 agtgtttatgtataagttatttctatagcaaaaga 9875559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 97 - 138
Target Start/End: Original strand, 3611157 - 3611198
Alignment:
Q  97 ataagtgtttatgtataagttatttctataacaaaagataaa 138  Q
    ||||||| |||||||||||||||||||||| |||||| ||||    
T  3611157 ataagtgcttatgtataagttatttctatagcaaaaggtaaa 3611198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 97 - 138
Target Start/End: Original strand, 3673738 - 3673779
Alignment:
Q  97 ataagtgtttatgtataagttatttctataacaaaagataaa 138  Q
    ||||||| |||||||| ||||||||||||||||||| |||||    
T  3673738 ataagtgcttatgtattagttatttctataacaaaatataaa 3673779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 105 - 138
Target Start/End: Original strand, 5133711 - 5133744
Alignment:
Q  105 ttatgtataagttatttctataacaaaagataaa 138  Q
    ||||||||||| ||||||||||||||||||||||    
T  5133711 ttatgtataagctatttctataacaaaagataaa 5133744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 97 - 138
Target Start/End: Original strand, 7825183 - 7825224
Alignment:
Q  97 ataagtgtttatgtataagttatttctataacaaaagataaa 138  Q
    |||||||||| |||||||| ||||| ||||||||||||||||    
T  7825183 ataagtgtttctgtataagctatttttataacaaaagataaa 7825224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 97 - 138
Target Start/End: Original strand, 9478230 - 9478271
Alignment:
Q  97 ataagtgtttatgtataagttatttctataacaaaagataaa 138  Q
    ||||||||||||||||||| |||||||||||||  |||||||    
T  9478230 ataagtgtttatgtataagctatttctataacagtagataaa 9478271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 97 - 138
Target Start/End: Complemental strand, 11344423 - 11344382
Alignment:
Q  97 ataagtgtttatgtataagttatttctataacaaaagataaa 138  Q
    ||||||| ||||| ||||| ||||||||||||||||||||||    
T  11344423 ataagtgcttatgcataagatatttctataacaaaagataaa 11344382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 105 - 138
Target Start/End: Complemental strand, 24141780 - 24141747
Alignment:
Q  105 ttatgtataagttatttctataacaaaagataaa 138  Q
    ||||||||||||||||||||| ||||||||||||    
T  24141780 ttatgtataagttatttctatcacaaaagataaa 24141747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 97 - 138
Target Start/End: Original strand, 25609727 - 25609768
Alignment:
Q  97 ataagtgtttatgtataagttatttctataacaaaagataaa 138  Q
    ||||||| ||||||||||| ||||||||||| ||||||||||    
T  25609727 ataagtgcttatgtataagctatttctataagaaaagataaa 25609768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 97 - 138
Target Start/End: Complemental strand, 28803645 - 28803604
Alignment:
Q  97 ataagtgtttatgtataagttatttctataacaaaagataaa 138  Q
    ||||||| |||| ||||||||||||| |||||||||||||||    
T  28803645 ataagtgcttatatataagttatttcgataacaaaagataaa 28803604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 97 - 138
Target Start/End: Original strand, 31461369 - 31461410
Alignment:
Q  97 ataagtgtttatgtataagttatttctataacaaaagataaa 138  Q
    ||||||| |||| |||||| ||||||||||||||||||||||    
T  31461369 ataagtggttatatataagctatttctataacaaaagataaa 31461410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 97 - 138
Target Start/End: Complemental strand, 34055040 - 34054999
Alignment:
Q  97 ataagtgtttatgtataagttatttctataacaaaagataaa 138  Q
    ||||||| ||||||||| | ||||||||||||||||||||||    
T  34055040 ataagtgcttatgtataggctatttctataacaaaagataaa 34054999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 97 - 138
Target Start/End: Complemental strand, 44606227 - 44606186
Alignment:
Q  97 ataagtgtttatgtataagttatttctataacaaaagataaa 138  Q
    ||||||||||||||||||| |||||  |||||||||||||||    
T  44606227 ataagtgtttatgtataagctattttcataacaaaagataaa 44606186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 110 - 138
Target Start/End: Complemental strand, 1939458 - 1939430
Alignment:
Q  110 tataagttatttctataacaaaagataaa 138  Q
    |||||||||||||||||||||||||||||    
T  1939458 tataagttatttctataacaaaagataaa 1939430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 98 - 138
Target Start/End: Original strand, 2416245 - 2416285
Alignment:
Q  98 taagtgtttatgtataagttatttctataacaaaagataaa 138  Q
    |||||| ||||||||||||||||||| || |||||||||||    
T  2416245 taagtgcttatgtataagttatttctgtagcaaaagataaa 2416285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 103 - 139
Target Start/End: Original strand, 29430693 - 29430729
Alignment:
Q  103 gtttatgtataagttatttctataacaaaagataaat 139  Q
    ||||||||||||| ||||||||||||||||| |||||    
T  29430693 gtttatgtataagctatttctataacaaaagttaaat 29430729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 98 - 138
Target Start/End: Complemental strand, 40672934 - 40672894
Alignment:
Q  98 taagtgtttatgtataagttatttctataacaaaagataaa 138  Q
    ||||| |||||||||||||||||||||| | ||||||||||    
T  40672934 taagtttttatgtataagttatttctatgaaaaaagataaa 40672894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 106 - 138
Target Start/End: Original strand, 41022176 - 41022208
Alignment:
Q  106 tatgtataagttatttctataacaaaagataaa 138  Q
    ||||||||||||||||| |||||||||||||||    
T  41022176 tatgtataagttatttcaataacaaaagataaa 41022208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 38; Significance: 0.000000000003; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 101 - 138
Target Start/End: Complemental strand, 5554900 - 5554863
Alignment:
Q  101 gtgtttatgtataagttatttctataacaaaagataaa 138  Q
    ||||||||||||||||||||||||||||||||||||||    
T  5554900 gtgtttatgtataagttatttctataacaaaagataaa 5554863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 97 - 138
Target Start/End: Complemental strand, 24836338 - 24836297
Alignment:
Q  97 ataagtgtttatgtataagttatttctataacaaaagataaa 138  Q
    |||||| |||||||||||||||||||||||||||||||||||    
T  24836338 ataagtatttatgtataagttatttctataacaaaagataaa 24836297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 97 - 138
Target Start/End: Original strand, 33116536 - 33116577
Alignment:
Q  97 ataagtgtttatgtataagttatttctataacaaaagataaa 138  Q
    ||||||||||||||||||||||||||| ||||||||||||||    
T  33116536 ataagtgtttatgtataagttatttctttaacaaaagataaa 33116577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 94 - 138
Target Start/End: Complemental strand, 33068703 - 33068659
Alignment:
Q  94 caaataagtgtttatgtataagttatttctataacaaaagataaa 138  Q
    ||||||| || ||||||||||||||||||||||||||||||||||    
T  33068703 caaataaatgcttatgtataagttatttctataacaaaagataaa 33068659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 104 - 138
Target Start/End: Complemental strand, 34544582 - 34544548
Alignment:
Q  104 tttatgtataagttatttctataacaaaagataaa 138  Q
    |||||||||||||||||||||||||||||||||||    
T  34544582 tttatgtataagttatttctataacaaaagataaa 34544548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 97 - 138
Target Start/End: Original strand, 31461609 - 31461650
Alignment:
Q  97 ataagtgtttatgtataagttatttctataacaaaagataaa 138  Q
    ||||||| ||||||||||| ||||||||||||||||||||||    
T  31461609 ataagtgcttatgtataagctatttctataacaaaagataaa 31461650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 97 - 138
Target Start/End: Original strand, 32975909 - 32975950
Alignment:
Q  97 ataagtgtttatgtataagttatttctataacaaaagataaa 138  Q
    ||||||||||||||||||||||||||| |||||||| |||||    
T  32975909 ataagtgtttatgtataagttatttctgtaacaaaatataaa 32975950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 138
Target Start/End: Complemental strand, 4247772 - 4247732
Alignment:
Q  98 taagtgtttatgtataagttatttctataacaaaagataaa 138  Q
    |||||| ||||||||||| ||||||||||||||||||||||    
T  4247772 taagtgcttatgtataagctatttctataacaaaagataaa 4247732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 138
Target Start/End: Complemental strand, 33500615 - 33500579
Alignment:
Q  102 tgtttatgtataagttatttctataacaaaagataaa 138  Q
    |||||||||||||| ||||||||||||||||||||||    
T  33500615 tgtttatgtataagctatttctataacaaaagataaa 33500579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 140
Target Start/End: Original strand, 33259747 - 33259790
Alignment:
Q  97 ataagtgtttatgtataagttatttctataacaaaagataaatt 140  Q
    ||||||| ||||||||||| ||||| ||||||||||||||||||    
T  33259747 ataagtgcttatgtataagctatttttataacaaaagataaatt 33259790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 100 - 138
Target Start/End: Original strand, 507154 - 507192
Alignment:
Q  100 agtgtttatgtataagttatttctataacaaaagataaa 138  Q
    |||| |||||||||| |||||||||||||||||||||||    
T  507154 agtgcttatgtataaattatttctataacaaaagataaa 507192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 97 - 127
Target Start/End: Complemental strand, 2548346 - 2548316
Alignment:
Q  97 ataagtgtttatgtataagttatttctataa 127  Q
    |||||||||||||||||||||||||||||||    
T  2548346 ataagtgtttatgtataagttatttctataa 2548316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 105 - 139
Target Start/End: Original strand, 10836760 - 10836794
Alignment:
Q  105 ttatgtataagttatttctataacaaaagataaat 139  Q
    ||||||||||||||| |||||||||||||||||||    
T  10836760 ttatgtataagttatatctataacaaaagataaat 10836794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 108 - 138
Target Start/End: Original strand, 31672012 - 31672042
Alignment:
Q  108 tgtataagttatttctataacaaaagataaa 138  Q
    |||||||||||||||||||||||||||||||    
T  31672012 tgtataagttatttctataacaaaagataaa 31672042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 97 - 138
Target Start/End: Complemental strand, 2023768 - 2023727
Alignment:
Q  97 ataagtgtttatgtataagttatttctataacaaaagataaa 138  Q
    ||||||||| || ||||||||||||||||| |||||||||||    
T  2023768 ataagtgttcatatataagttatttctatagcaaaagataaa 2023727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 100 - 137
Target Start/End: Original strand, 6647323 - 6647360
Alignment:
Q  100 agtgtttatgtataagttatttctataacaaaagataa 137  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  6647323 agtgcttatgtataagttatttctataacaaaaaataa 6647360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 105 - 138
Target Start/End: Complemental strand, 9559672 - 9559639
Alignment:
Q  105 ttatgtataagttatttctataacaaaagataaa 138  Q
    |||||||||||||||||||||| |||||||||||    
T  9559672 ttatgtataagttatttctatagcaaaagataaa 9559639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 97 - 138
Target Start/End: Complemental strand, 31668824 - 31668783
Alignment:
Q  97 ataagtgtttatgtataagttatttctataacaaaagataaa 138  Q
    ||||||| ||||||||||| |||||||||||||||| |||||    
T  31668824 ataagtgcttatgtataagctatttctataacaaaacataaa 31668783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 97 - 138
Target Start/End: Complemental strand, 32843454 - 32843413
Alignment:
Q  97 ataagtgtttatgtataagttatttctataacaaaagataaa 138  Q
    ||||||| ||||||||||||||||||||||| || |||||||    
T  32843454 ataagtgcttatgtataagttatttctataataagagataaa 32843413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 98 - 138
Target Start/End: Original strand, 2514634 - 2514674
Alignment:
Q  98 taagtgtttatgtataagttatttctataacaaaagataaa 138  Q
    |||||| ||||||||||| ||||||||||| ||||||||||    
T  2514634 taagtgcttatgtataagctatttctataataaaagataaa 2514674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 100 - 132
Target Start/End: Original strand, 32513759 - 32513791
Alignment:
Q  100 agtgtttatgtataagttatttctataacaaaa 132  Q
    |||||||||| ||||||||||||||||||||||    
T  32513759 agtgtttatgcataagttatttctataacaaaa 32513791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 37; Significance: 0.00000000001; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 98 - 138
Target Start/End: Original strand, 27140417 - 27140457
Alignment:
Q  98 taagtgtttatgtataagttatttctataacaaaagataaa 138  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  27140417 taagtgtttatgtgtaagttatttctataacaaaagataaa 27140457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 94 - 138
Target Start/End: Original strand, 37818392 - 37818436
Alignment:
Q  94 caaataagtgtttatgtataagttatttctataacaaaagataaa 138  Q
    |||||||||| |||||||||||||||||||||||||| |||||||    
T  37818392 caaataagtgcttatgtataagttatttctataacaagagataaa 37818436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 99 - 138
Target Start/End: Original strand, 15360827 - 15360866
Alignment:
Q  99 aagtgtttatgtataagttatttctataacaaaagataaa 138  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  15360827 aagtgtttatgtattagttatttctataacaaaagataaa 15360866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 97 - 138
Target Start/End: Complemental strand, 4202268 - 4202227
Alignment:
Q  97 ataagtgtttatgtataagttatttctataacaaaagataaa 138  Q
    ||||||| ||| ||||||||||||||||||||||||||||||    
T  4202268 ataagtgcttaagtataagttatttctataacaaaagataaa 4202227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 97 - 138
Target Start/End: Original strand, 13037795 - 13037836
Alignment:
Q  97 ataagtgtttatgtataagttatttctataacaaaagataaa 138  Q
    ||||||| ||||||||||| ||||||||||||||||||||||    
T  13037795 ataagtgcttatgtataagctatttctataacaaaagataaa 13037836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 97 - 138
Target Start/End: Complemental strand, 16982075 - 16982034
Alignment:
Q  97 ataagtgtttatgtataagttatttctataacaaaagataaa 138  Q
    |||||||||||||||||| ||||||| |||||||||||||||    
T  16982075 ataagtgtttatgtataacttatttcgataacaaaagataaa 16982034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 97 - 138
Target Start/End: Complemental strand, 37593808 - 37593767
Alignment:
Q  97 ataagtgtttatgtataagttatttctataacaaaagataaa 138  Q
    ||||||||||||||||||| ||||||||||||| ||||||||    
T  37593808 ataagtgtttatgtataaggtatttctataacacaagataaa 37593767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 138
Target Start/End: Original strand, 4200161 - 4200201
Alignment:
Q  98 taagtgtttatgtataagttatttctataacaaaagataaa 138  Q
    ||||||||||| |||||||||||| ||||||||||||||||    
T  4200161 taagtgtttatatataagttatttttataacaaaagataaa 4200201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 138
Target Start/End: Original strand, 49517006 - 49517042
Alignment:
Q  102 tgtttatgtataagttatttctataacaaaagataaa 138  Q
    ||||| |||||||||||||||||||||||||||||||    
T  49517006 tgtttgtgtataagttatttctataacaaaagataaa 49517042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 136
Target Start/End: Original strand, 26679205 - 26679244
Alignment:
Q  97 ataagtgtttatgtataagttatttctataacaaaagata 136  Q
    |||||||||||||| |||||||||||||||||||| ||||    
T  26679205 ataagtgtttatgtgtaagttatttctataacaaacgata 26679244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 98 - 141
Target Start/End: Original strand, 45327539 - 45327582
Alignment:
Q  98 taagtgtttatgtataagttatttctataacaaaagataaatta 141  Q
    ||||||| |||||||||| ||||||||||||||||| |||||||    
T  45327539 taagtgtatatgtataagatatttctataacaaaaggtaaatta 45327582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 99 - 133
Target Start/End: Complemental strand, 24146396 - 24146362
Alignment:
Q  99 aagtgtttatgtataagttatttctataacaaaag 133  Q
    ||||| |||||||||||||||||||||||||||||    
T  24146396 aagtgcttatgtataagttatttctataacaaaag 24146362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 108 - 138
Target Start/End: Original strand, 49557083 - 49557113
Alignment:
Q  108 tgtataagttatttctataacaaaagataaa 138  Q
    |||||||||||||||||||||||||||||||    
T  49557083 tgtataagttatttctataacaaaagataaa 49557113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 105 - 181
Target Start/End: Original strand, 50319231 - 50319306
Alignment:
Q  105 ttatgtataagttatttctataacaaaagat-aaattaagccataatctgttttcataagctatcctatagaacttat 181  Q
    ||||||||||| ||||||||||||||||||| |||| ||| |  ||  |||||||||||||||||||| ||| |||||    
T  50319231 ttatgtataagctatttctataacaaaagataaaataaagtc--aagttgttttcataagctatcctagagagcttat 50319306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 97 - 138
Target Start/End: Original strand, 6981423 - 6981464
Alignment:
Q  97 ataagtgtttatgtataagttatttctataacaaaagataaa 138  Q
    |||||||||||| ||||| ||||||||||||||||| |||||    
T  6981423 ataagtgtttatatataaattatttctataacaaaaaataaa 6981464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 97 - 130
Target Start/End: Original strand, 20713587 - 20713620
Alignment:
Q  97 ataagtgtttatgtataagttatttctataacaa 130  Q
    |||| |||||||||||||||||||||||||||||    
T  20713587 ataaatgtttatgtataagttatttctataacaa 20713620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 105 - 138
Target Start/End: Original strand, 23895275 - 23895308
Alignment:
Q  105 ttatgtataagttatttctataacaaaagataaa 138  Q
    ||||||||||| ||||||||||||||||||||||    
T  23895275 ttatgtataagctatttctataacaaaagataaa 23895308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 105 - 142
Target Start/End: Complemental strand, 29007847 - 29007810
Alignment:
Q  105 ttatgtataagttatttctataacaaaagataaattaa 142  Q
    |||||| ||||||||||||||||||||||| |||||||    
T  29007847 ttatgtctaagttatttctataacaaaagaaaaattaa 29007810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 97 - 138
Target Start/End: Complemental strand, 29046052 - 29046011
Alignment:
Q  97 ataagtgtttatgtataagttatttctataacaaaagataaa 138  Q
    ||||||| || |||||||| ||||||||||||||||||||||    
T  29046052 ataagtgcttgtgtataagatatttctataacaaaagataaa 29046011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 101 - 138
Target Start/End: Complemental strand, 33339555 - 33339518
Alignment:
Q  101 gtgtttatgtataagttatttctataacaaaagataaa 138  Q
    ||||||||||||||| |||||||||| |||||||||||    
T  33339555 gtgtttatgtataagctatttctataccaaaagataaa 33339518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 105 - 138
Target Start/End: Original strand, 36641814 - 36641847
Alignment:
Q  105 ttatgtataagttatttctataacaaaagataaa 138  Q
    |||| |||||||||||||||||||||||||||||    
T  36641814 ttatatataagttatttctataacaaaagataaa 36641847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 97 - 138
Target Start/End: Complemental strand, 45769882 - 45769841
Alignment:
Q  97 ataagtgtttatgtataagttatttctataacaaaagataaa 138  Q
    ||||||| |||||| ||| |||||||||||||||||||||||    
T  45769882 ataagtgcttatgtgtaaattatttctataacaaaagataaa 45769841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 105 - 137
Target Start/End: Complemental strand, 172708 - 172676
Alignment:
Q  105 ttatgtataagttatttctataacaaaagataa 137  Q
    ||||||||||| |||||||||||||||||||||    
T  172708 ttatgtataagctatttctataacaaaagataa 172676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 105 - 137
Target Start/End: Original strand, 6976887 - 6976919
Alignment:
Q  105 ttatgtataagttatttctataacaaaagataa 137  Q
    ||||||||||| |||||||||||||||||||||    
T  6976887 ttatgtataagatatttctataacaaaagataa 6976919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 97 - 133
Target Start/End: Original strand, 17269181 - 17269217
Alignment:
Q  97 ataagtgtttatgtataagttatttctataacaaaag 133  Q
    ||||||| |||||||||||||||||||| ||||||||    
T  17269181 ataagtgcttatgtataagttatttctagaacaaaag 17269217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 98 - 138
Target Start/End: Complemental strand, 38651547 - 38651507
Alignment:
Q  98 taagtgtttatgtataagttatttctataacaaaagataaa 138  Q
    |||||| ||||||||||| || |||||||||||||||||||    
T  38651547 taagtgcttatgtataagctaattctataacaaaagataaa 38651507  T

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Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 97 - 137
Target Start/End: Complemental strand, 45999427 - 45999387
Alignment:
Q  97 ataagtgtttatgtataagttatttctataacaaaagataa 137  Q
    ||||||| | ||||||||| |||||||||||||||||||||    
T  45999427 ataagtgctcatgtataagctatttctataacaaaagataa 45999387  T

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Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 102 - 138
Target Start/End: Complemental strand, 48830210 - 48830174
Alignment:
Q  102 tgtttatgtataagttatttctataacaaaagataaa 138  Q
    |||||||||||||||||||||||| || |||||||||    
T  48830210 tgtttatgtataagttatttctattaccaaagataaa 48830174  T

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Target: scaffold0590 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0590
Description:

Target: scaffold0590; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 97 - 138
Target Start/End: Complemental strand, 1213 - 1172
Alignment:
Q  97 ataagtgtttatgtataagttatttctataacaaaagataaa 138  Q
    ||||||| ||||||||||| ||||||||||||||||||||||    
T  1213 ataagtgcttatgtataagctatttctataacaaaagataaa 1172  T

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Target: scaffold0275 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 97 - 138
Target Start/End: Original strand, 2762 - 2803
Alignment:
Q  97 ataagtgtttatgtataagttatttctataacaaaagataaa 138  Q
    ||||||| ||||||||||| ||||||||||||||||||||||    
T  2762 ataagtgcttatgtataagctatttctataacaaaagataaa 2803  T

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Target: scaffold0100 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 97 - 138
Target Start/End: Original strand, 42548 - 42589
Alignment:
Q  97 ataagtgtttatgtataagttatttctataacaaaagataaa 138  Q
    ||||||| |||||||||||| |||||||||||||||||||||    
T  42548 ataagtgcttatgtataagtcatttctataacaaaagataaa 42589  T

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Target: scaffold0024 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 138
Target Start/End: Original strand, 27508 - 27548
Alignment:
Q  98 taagtgtttatgtataagttatttctataacaaaagataaa 138  Q
    |||||| ||||||||||||||||||||||||| ||||||||    
T  27508 taagtgcttatgtataagttatttctataacagaagataaa 27548  T

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Target: scaffold0508 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 105 - 138
Target Start/End: Complemental strand, 9906 - 9873
Alignment:
Q  105 ttatgtataagttatttctataacaaaagataaa 138  Q
    |||||||||||||||||||||||||||| |||||    
T  9906 ttatgtataagttatttctataacaaaaaataaa 9873  T

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Target: scaffold0019 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 105 - 138
Target Start/End: Complemental strand, 104265 - 104232
Alignment:
Q  105 ttatgtataagttatttctataacaaaagataaa 138  Q
    |||||||||||||||||||||||||||| |||||    
T  104265 ttatgtataagttatttctataacaaaaaataaa 104232  T

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