View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15946_low_10 (Length: 271)
Name: NF15946_low_10
Description: NF15946
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15946_low_10 |
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Alignment Details
Target: chr8 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 12 - 255
Target Start/End: Original strand, 36836134 - 36836379
Alignment:
| Q |
12 |
aaaggctaacacataatttacaagaatgtttaagttttccatgtgtcttaaaattatagatgaggagaaattgatccgatgatagcttaatattttgtga |
111 |
Q |
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| T |
36836134 |
aaaggctaacacataaattacaagaatgtttaagttttccatgtgtcttaaaattatagatgaggagaaattgatctgatgatagcttaatattttgtga |
36836233 |
T |
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| Q |
112 |
ttcagttttcacacatacacatgatagagtaggatctcggctgaagtacaaaatcaatacaatattcaatcctaaaaccgttctatagaggatttcaaca |
211 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36836234 |
ttcagttttcacacatacacatgatagagtaggatctcggctgaagtacaaaatcaatacaatattcaatcctaaaaccgttctatagaggatttcaaca |
36836333 |
T |
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| Q |
212 |
--tgtgtgcgcgcgtttgacaactgttcttgtgataatgatctagg |
255 |
Q |
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|||||||||| ||||||||||||||||||||||||||||||||| |
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| T |
36836334 |
tgtgtgtgcgcgagtttgacaactgttcttgtgataatgatctagg |
36836379 |
T |
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