View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15946_low_8 (Length: 306)
Name: NF15946_low_8
Description: NF15946
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15946_low_8 |
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Alignment Details
Target: chr6 (Bit Score: 272; Significance: 1e-152; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 17 - 296
Target Start/End: Complemental strand, 25414366 - 25414087
Alignment:
| Q |
17 |
cagattcttacgtaccaaactagacttcaaaacacataccaaataacgagtcatttgatctttatctaacaattgagatatatgattttgtgacagtaga |
116 |
Q |
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| T |
25414366 |
cagattcttacgtaccaaactagacttcaaaagacataccaaataacgagtcatttgatctttatctaacaattgagatatatgattttgtgacagtaga |
25414267 |
T |
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| Q |
117 |
gaatacaaattctgaaaaatatcaaataatttttcatttttagtcctctgtttattatgaacaattgaaagggaatttggcaatcatgtcatctaaaata |
216 |
Q |
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||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25414266 |
gaatacaaattctgaaaaatatcgaataatttttcatttttagtcctctgtttattatgaacaattgaaagggaatttggcaatcatgtcatctaaaata |
25414167 |
T |
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| Q |
217 |
tgctaaagttttggttaggaaactcgctttatatttttggctctgtttattattacatgtatttgtggctgtttcctatg |
296 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25414166 |
tgctaaagttttggttaggaaactcgctttatatttttggctctgtttattattacatgtatttgtggctgtttcctatg |
25414087 |
T |
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