View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15948_high_6 (Length: 294)
Name: NF15948_high_6
Description: NF15948
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15948_high_6 |
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Alignment Details
Target: chr2 (Bit Score: 232; Significance: 1e-128; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 13 - 277
Target Start/End: Complemental strand, 4677185 - 4676921
Alignment:
| Q |
13 |
aatatactatgattataacatgaaacaacctcaaacattaaattgagccaataattgtcctatccttcgaaagtcaaatacaaattatttttgtacgtag |
112 |
Q |
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| T |
4677185 |
aatatactatgattataacataaaacaacctcaaacattaaattgagcccataattgtcctatccttcgaaagtcaaatacaaattatttttgtacgtag |
4677086 |
T |
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| Q |
113 |
tatatatgaaggtgaaggcctctctggttccatacatnnnnnnnccaagcagagtagcaatcatgatcaaaagatggagaaacaatttgaagaagaagaa |
212 |
Q |
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| T |
4677085 |
tatatatgaaggtgaaggcctctctggttccatacataaaaaaaccaagcagagtagcaatcatgatcaaaagatggagaaacaatttgaagaagaagaa |
4676986 |
T |
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| Q |
213 |
accaaacaacagcagcaacatagcaaacaaatggcaacaactcagtggtgaaaatcattggatag |
277 |
Q |
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| T |
4676985 |
accaaacaacagcagcagcatagcaaacaaatggcaacaactcagtggtgaaaatcattggatag |
4676921 |
T |
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