View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15948_low_4 (Length: 437)

Name: NF15948_low_4
Description: NF15948
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15948_low_4
NF15948_low_4
[»] chr6 (43 HSPs)
chr6 (34-344)||(33329932-33330242)
chr6 (34-344)||(33335429-33335739)
chr6 (50-344)||(16839037-16839331)
chr6 (61-344)||(6005724-6006007)
chr6 (67-336)||(5343788-5344057)
chr6 (45-336)||(6438785-6439076)
chr6 (60-284)||(28155130-28155354)
chr6 (56-338)||(14741931-14742213)
chr6 (60-338)||(22010194-22010472)
chr6 (61-338)||(11857286-11857562)
chr6 (56-250)||(14737159-14737353)
chr6 (176-338)||(30125023-30125185)
chr6 (159-336)||(6136363-6136540)
chr6 (158-250)||(5266487-5266579)
chr6 (57-335)||(5674238-5674515)
chr6 (159-336)||(16578917-16579094)
chr6 (159-336)||(16616286-16616463)
chr6 (159-335)||(22709460-22709636)
chr6 (286-338)||(5266596-5266648)
chr6 (286-338)||(14737090-14737142)
chr6 (286-336)||(5016976-5017026)
chr6 (286-336)||(31085953-31086003)
chr6 (159-336)||(33342503-33342681)
chr6 (159-331)||(34166678-34166851)
chr6 (159-235)||(6026942-6027018)
chr6 (269-344)||(23896882-23896957)
chr6 (286-344)||(24714938-24714997)
chr6 (159-346)||(27647465-27647652)
chr6 (159-235)||(13150957-13151034)
chr6 (299-336)||(18234663-18234700)
chr6 (295-344)||(21272461-21272510)
chr6 (159-336)||(25420804-25420981)
chr6 (159-235)||(34164552-34164629)
chr6 (181-335)||(2171941-2172095)
chr6 (159-336)||(16554461-16554638)
chr6 (159-336)||(16631017-16631194)
chr6 (269-331)||(6097911-6097973)
chr6 (269-331)||(13150861-13150923)
chr6 (295-336)||(6026841-6026882)
chr6 (303-336)||(28155097-28155130)
chr6 (295-331)||(26253602-26253638)
chr6 (295-331)||(34151840-34151876)
chr6 (295-331)||(34164456-34164492)
[»] chr5 (53 HSPs)
chr5 (45-346)||(2785664-2785965)
chr5 (45-344)||(33791605-33791904)
chr5 (45-344)||(33768473-33768772)
chr5 (50-344)||(31396489-31396783)
chr5 (50-344)||(31401346-31401640)
chr5 (45-336)||(28807083-28807374)
chr5 (45-344)||(37560947-37561245)
chr5 (45-344)||(37556125-37556423)
chr5 (60-338)||(15044997-15045274)
chr5 (61-338)||(1456643-1456920)
chr5 (61-338)||(27450128-27450404)
chr5 (61-338)||(27445285-27445561)
chr5 (157-338)||(30631762-30631943)
chr5 (159-338)||(43599133-43599313)
chr5 (159-338)||(43604625-43604805)
chr5 (159-338)||(43610117-43610297)
chr5 (165-338)||(29402555-29402728)
chr5 (62-250)||(31180568-31180756)
chr5 (159-250)||(43592688-43592779)
chr5 (159-336)||(16546223-16546400)
chr5 (159-336)||(16544001-16544178)
chr5 (159-336)||(40379685-40379862)
chr5 (57-335)||(24136198-24136475)
chr5 (159-336)||(40381896-40382073)
chr5 (159-331)||(25077718-25077890)
chr5 (159-331)||(25135687-25135859)
chr5 (286-344)||(14520796-14520854)
chr5 (269-335)||(9352816-9352882)
chr5 (159-335)||(26177475-26177651)
chr5 (159-336)||(10592851-10593027)
chr5 (159-336)||(22536668-22536845)
chr5 (286-338)||(31180773-31180825)
chr5 (286-338)||(43592797-43592849)
chr5 (286-345)||(12083649-12083708)
chr5 (269-335)||(16407650-16407716)
chr5 (295-332)||(36931855-36931892)
chr5 (295-335)||(11916453-11916493)
chr5 (269-335)||(16409086-16409152)
chr5 (159-331)||(9789624-9789796)
chr5 (269-335)||(15465050-15465116)
chr5 (159-331)||(18442048-18442220)
chr5 (300-338)||(43625605-43625643)
chr5 (295-331)||(35388197-35388233)
chr5 (159-235)||(38219845-38219921)
chr5 (269-344)||(26170357-26170432)
chr5 (269-331)||(29719978-29720040)
chr5 (269-331)||(29722165-29722227)
chr5 (269-331)||(29752315-29752377)
chr5 (1-36)||(37556331-37556366)
chr5 (269-307)||(25412396-25412434)
chr5 (286-346)||(31004643-31004703)
chr5 (158-214)||(29751559-29751615)
chr5 (295-331)||(29751675-29751711)
[»] chr1 (36 HSPs)
chr1 (34-344)||(43987948-43988259)
chr1 (45-336)||(25439406-25439696)
chr1 (62-336)||(44023384-44023658)
chr1 (45-336)||(25444599-25444889)
chr1 (45-336)||(39445784-39446075)
chr1 (45-336)||(1054521-1054812)
chr1 (60-335)||(41390903-41391177)
chr1 (60-282)||(41398558-41398779)
chr1 (60-250)||(24786918-24787107)
chr1 (68-250)||(24793740-24793921)
chr1 (159-336)||(44203225-44203402)
chr1 (338-413)||(30367746-30367821)
chr1 (286-336)||(13598967-13599017)
chr1 (286-344)||(37070334-37070392)
chr1 (286-335)||(21536121-21536170)
chr1 (286-338)||(24793671-24793723)
chr1 (181-335)||(19360921-19361075)
chr1 (158-331)||(20622635-20622808)
chr1 (269-335)||(24202260-24202326)
chr1 (158-335)||(51764999-51765176)
chr1 (295-331)||(13604108-13604144)
chr1 (181-331)||(19365781-19365931)
chr1 (269-336)||(9036010-9036077)
chr1 (371-410)||(13007700-13007739)
chr1 (295-338)||(13659849-13659892)
chr1 (286-344)||(3282273-3282331)
chr1 (295-345)||(26644372-26644422)
chr1 (295-336)||(16124188-16124229)
chr1 (269-336)||(21053547-21053614)
chr1 (295-335)||(41398773-41398813)
chr1 (371-410)||(13214319-13214358)
chr1 (371-410)||(19727653-19727692)
chr1 (66-235)||(9986894-9987063)
chr1 (295-331)||(9986798-9986834)
chr1 (362-410)||(13005479-13005527)
chr1 (295-323)||(29652390-29652418)
[»] chr8 (34 HSPs)
chr8 (45-344)||(35745680-35745979)
chr8 (45-345)||(39784324-39784623)
chr8 (67-338)||(10683744-10684015)
chr8 (60-338)||(25327669-25327947)
chr8 (60-337)||(6311652-6311929)
chr8 (158-338)||(36979829-36980009)
chr8 (67-338)||(4759539-4759809)
chr8 (60-338)||(18852632-18852909)
chr8 (68-338)||(30656008-30656277)
chr8 (60-338)||(7289432-7289711)
chr8 (158-338)||(18870026-18870206)
chr8 (158-338)||(33037292-33037472)
chr8 (60-250)||(10688692-10688882)
chr8 (60-335)||(1261423-1261699)
chr8 (159-336)||(3439095-3439271)
chr8 (269-346)||(7412877-7412954)
chr8 (286-336)||(5701959-5702009)
chr8 (286-338)||(10688623-10688675)
chr8 (286-344)||(4456575-4456633)
chr8 (159-336)||(42575724-42575902)
chr8 (286-335)||(19175233-19175282)
chr8 (269-335)||(2627327-2627393)
chr8 (159-238)||(25689646-25689725)
chr8 (286-336)||(15290150-15290200)
chr8 (286-336)||(15470519-15470569)
chr8 (286-336)||(25689568-25689618)
chr8 (159-331)||(26288332-26288504)
chr8 (159-331)||(26301589-26301761)
chr8 (159-331)||(26313583-26313755)
chr8 (160-235)||(15290251-15290327)
chr8 (160-235)||(15470620-15470696)
chr8 (296-336)||(23799099-23799139)
chr8 (269-331)||(31042921-31042983)
chr8 (159-235)||(2627427-2627503)
[»] chr2 (26 HSPs)
chr2 (45-344)||(19344711-19345010)
chr2 (45-346)||(19349569-19349870)
chr2 (60-338)||(39811482-39811760)
chr2 (61-338)||(32247091-32247347)
chr2 (66-338)||(14291849-14292120)
chr2 (57-338)||(9295867-9296147)
chr2 (66-338)||(11098392-11098663)
chr2 (159-336)||(12647783-12647960)
chr2 (159-344)||(25410081-25410266)
chr2 (286-343)||(8389624-8389681)
chr2 (269-338)||(44310476-44310545)
chr2 (181-335)||(3492214-3492368)
chr2 (159-331)||(4484738-4484910)
chr2 (286-344)||(10706725-10706783)
chr2 (295-336)||(20522797-20522838)
chr2 (295-336)||(33528105-33528146)
chr2 (286-342)||(36757419-36757475)
chr2 (286-337)||(21630511-21630562)
chr2 (181-335)||(30832930-30833084)
chr2 (269-335)||(32289157-32289223)
chr2 (286-337)||(39483443-39483494)
chr2 (286-344)||(23077944-23078002)
chr2 (286-344)||(28258669-28258727)
chr2 (269-335)||(40739382-40739448)
chr2 (298-344)||(13569908-13569954)
chr2 (269-309)||(29867491-29867531)
[»] chr3 (67 HSPs)
chr3 (34-335)||(2672427-2672728)
chr3 (34-335)||(2676583-2676884)
chr3 (67-336)||(24968428-24968697)
chr3 (67-344)||(32475795-32476072)
chr3 (67-346)||(32480653-32480932)
chr3 (67-336)||(8512551-8512820)
chr3 (67-336)||(8517431-8517700)
chr3 (34-338)||(18656719-18657024)
chr3 (111-338)||(22172667-22172893)
chr3 (60-338)||(28503324-28503602)
chr3 (66-338)||(40372261-40372532)
chr3 (60-338)||(28501157-28501435)
chr3 (158-336)||(8477817-8477995)
chr3 (158-338)||(7167697-7167877)
chr3 (158-235)||(27352189-27352266)
chr3 (158-250)||(8738616-8738708)
chr3 (158-250)||(9090854-9090946)
chr3 (158-250)||(2671158-2671250)
chr3 (159-336)||(54634717-54634894)
chr3 (159-336)||(4598922-4599100)
chr3 (159-336)||(4601143-4601321)
chr3 (286-344)||(36029659-36029717)
chr3 (286-338)||(30709264-30709316)
chr3 (286-345)||(16264896-16264955)
chr3 (286-336)||(21711768-21711818)
chr3 (286-344)||(27974433-27974491)
chr3 (269-335)||(37726224-37726290)
chr3 (286-344)||(39032017-39032075)
chr3 (295-336)||(1730916-1730957)
chr3 (159-336)||(6716092-6716269)
chr3 (295-338)||(8738547-8738590)
chr3 (295-338)||(9090785-9090828)
chr3 (269-335)||(23200654-23200720)
chr3 (269-335)||(26928089-26928155)
chr3 (269-335)||(37408045-37408111)
chr3 (159-336)||(10208785-10208963)
chr3 (269-335)||(23198455-23198521)
chr3 (286-344)||(27027273-27027331)
chr3 (286-344)||(27038608-27038666)
chr3 (159-331)||(10055817-10055990)
chr3 (159-331)||(10058039-10058212)
chr3 (159-331)||(10060261-10060434)
chr3 (159-331)||(10062483-10062656)
chr3 (159-331)||(10064705-10064878)
chr3 (159-331)||(10066927-10067100)
chr3 (295-336)||(40592252-40592293)
chr3 (286-331)||(40734087-40734132)
chr3 (159-235)||(25637121-25637197)
chr3 (286-338)||(35926057-35926108)
chr3 (269-336)||(3617041-3617108)
chr3 (159-238)||(6718374-6718453)
chr3 (295-338)||(16498642-16498685)
chr3 (295-337)||(24694654-24694697)
chr3 (286-337)||(48438782-48438833)
chr3 (181-335)||(1306441-1306595)
chr3 (159-336)||(10210985-10211163)
chr3 (295-337)||(47923326-47923368)
chr3 (286-335)||(32143870-32143919)
chr3 (286-330)||(27985971-27986015)
chr3 (269-335)||(7782637-7782703)
chr3 (269-335)||(33386146-33386212)
chr3 (286-336)||(6718295-6718345)
chr3 (269-307)||(9634818-9634856)
chr3 (286-336)||(45282592-45282642)
chr3 (269-338)||(27352086-27352155)
chr3 (286-331)||(40735018-40735063)
chr3 (269-336)||(25637020-25637087)
[»] scaffold0197 (2 HSPs)
scaffold0197 (50-344)||(18663-18957)
scaffold0197 (67-336)||(13791-14060)
[»] scaffold0259 (1 HSPs)
scaffold0259 (34-336)||(1746-2048)
[»] scaffold0028 (1 HSPs)
scaffold0028 (34-336)||(148451-148753)
[»] chr7 (40 HSPs)
chr7 (67-336)||(24265684-24265953)
chr7 (67-336)||(16880384-16880653)
chr7 (67-336)||(16885239-16885508)
chr7 (67-336)||(24260828-24261097)
chr7 (60-335)||(21811747-21812022)
chr7 (60-338)||(24023824-24024100)
chr7 (60-336)||(31109077-31109354)
chr7 (60-338)||(4873438-4873716)
chr7 (84-338)||(12406598-12406852)
chr7 (158-338)||(2058420-2058599)
chr7 (158-338)||(21640238-21640418)
chr7 (157-338)||(20357033-20357214)
chr7 (61-223)||(12397223-12397385)
chr7 (159-336)||(18392596-18392773)
chr7 (158-331)||(24789439-24789612)
chr7 (159-336)||(6592737-6592914)
chr7 (159-336)||(20343507-20343684)
chr7 (158-335)||(21646457-21646634)
chr7 (269-344)||(21983792-21983867)
chr7 (159-336)||(6594953-6595130)
chr7 (159-336)||(32060704-32060881)
chr7 (269-345)||(47264192-47264268)
chr7 (286-344)||(79955-80013)
chr7 (159-335)||(39730942-39731118)
chr7 (159-335)||(48408407-48408583)
chr7 (269-338)||(12397418-12397487)
chr7 (295-344)||(21989482-21989531)
chr7 (160-235)||(1533012-1533087)
chr7 (269-344)||(2479885-2479960)
chr7 (159-332)||(43504536-43504709)
chr7 (269-344)||(44847619-44847694)
chr7 (270-335)||(1532893-1532958)
chr7 (159-335)||(18414090-18414266)
chr7 (269-336)||(1562513-1562580)
chr7 (159-335)||(18409214-18409390)
chr7 (159-235)||(1562403-1562479)
chr7 (286-336)||(46515809-46515860)
chr7 (295-336)||(18390514-18390555)
chr7 (159-235)||(25767361-25767437)
chr7 (286-330)||(49092238-49092282)
[»] scaffold0009 (1 HSPs)
scaffold0009 (67-337)||(176456-176726)
[»] scaffold0464 (1 HSPs)
scaffold0464 (45-336)||(647-938)
[»] chr4 (42 HSPs)
chr4 (45-336)||(18856011-18856302)
chr4 (45-336)||(45347324-45347615)
chr4 (45-280)||(45356861-45357096)
chr4 (68-338)||(5732971-5733242)
chr4 (60-338)||(9228691-9228969)
chr4 (60-338)||(56141516-56141795)
chr4 (60-338)||(9223904-9224182)
chr4 (50-338)||(3814313-3814600)
chr4 (60-250)||(18712348-18712538)
chr4 (66-338)||(24742301-24742572)
chr4 (61-338)||(51520769-51521045)
chr4 (225-336)||(18860403-18860514)
chr4 (158-250)||(29761073-29761165)
chr4 (159-331)||(7122279-7122451)
chr4 (159-331)||(7124501-7124673)
chr4 (159-336)||(8392989-8393166)
chr4 (280-344)||(5143803-5143867)
chr4 (286-344)||(16628345-16628403)
chr4 (159-335)||(28467986-28468162)
chr4 (286-344)||(38151910-38151968)
chr4 (295-344)||(3778124-3778173)
chr4 (286-342)||(8689038-8689094)
chr4 (286-344)||(5148244-5148302)
chr4 (286-344)||(16622766-16622824)
chr4 (295-336)||(5268699-5268740)
chr4 (159-336)||(8395198-8395375)
chr4 (295-346)||(5396162-5396213)
chr4 (286-337)||(10047932-10047983)
chr4 (269-335)||(13992804-13992870)
chr4 (286-336)||(6742896-6742946)
chr4 (286-338)||(29761182-29761234)
chr4 (159-331)||(31495717-31495889)
chr4 (286-336)||(54867745-54867795)
chr4 (286-337)||(9194164-9194216)
chr4 (269-336)||(5135656-5135723)
chr4 (269-336)||(5137882-5137949)
chr4 (269-335)||(31985136-31985202)
chr4 (286-332)||(36314715-36314761)
chr4 (286-332)||(36328924-36328970)
chr4 (159-235)||(5135757-5135834)
chr4 (159-235)||(5137983-5138060)
chr4 (158-235)||(13992693-13992770)
[»] scaffold0355 (1 HSPs)
scaffold0355 (61-338)||(3342-3619)
[»] scaffold0135 (1 HSPs)
scaffold0135 (60-338)||(34559-34837)
[»] scaffold0665 (2 HSPs)
scaffold0665 (156-250)||(8105-8199)
scaffold0665 (286-338)||(8216-8268)
[»] scaffold0674 (1 HSPs)
scaffold0674 (159-336)||(4126-4303)
[»] scaffold0286 (1 HSPs)
scaffold0286 (159-335)||(21948-22124)
[»] scaffold0565 (1 HSPs)
scaffold0565 (159-336)||(3001-3178)
[»] scaffold1455 (1 HSPs)
scaffold1455 (269-336)||(1716-1783)
[»] scaffold0188 (1 HSPs)
scaffold0188 (159-335)||(17440-17616)
[»] scaffold0137 (1 HSPs)
scaffold0137 (159-336)||(5866-6044)
[»] scaffold0087 (2 HSPs)
scaffold0087 (298-344)||(36324-36370)
scaffold0087 (269-335)||(43443-43509)
[»] scaffold0006 (4 HSPs)
scaffold0006 (286-336)||(6252-6302)
scaffold0006 (298-336)||(3072-3110)
scaffold0006 (295-331)||(132765-132801)
scaffold0006 (295-338)||(149610-149653)
[»] scaffold0098 (1 HSPs)
scaffold0098 (295-335)||(45755-45795)
[»] scaffold0491 (2 HSPs)
scaffold0491 (269-335)||(9233-9299)
scaffold0491 (159-335)||(11569-11744)
[»] scaffold0510 (1 HSPs)
scaffold0510 (269-344)||(1083-1158)
[»] scaffold0140 (1 HSPs)
scaffold0140 (269-335)||(7920-7986)
[»] scaffold0036 (1 HSPs)
scaffold0036 (286-344)||(86153-86212)


Alignment Details
Target: chr6 (Bit Score: 251; Significance: 1e-139; HSPs: 43)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 34 - 344
Target Start/End: Complemental strand, 33330242 - 33329932
Alignment:
Q  34 tctcaaggttgtcttgaggttctctccaaaaatgcacaagaacactttaaatactagtcctgccctgaagaattcgagccacgatttccctagatcgtgt 133  Q
    ||||||||||||||| ||||| ||| |||||| ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  33330242 tctcaaggttgtcttaaggttgtcttcaaaaaagcacaagaacactttaaatactagtcctgccctgaagaaatcgtgccacgatttccctagatcgtgt 33330143  T
Q  134 cacgatgtgcaacgctccccaagttgaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgat 233  Q
    |||||| ||||||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  33330142 cacgatctgcaacggtccccaggttgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgat 33330043  T
Q  234 tttgcttccagcaaacttggctcactgcctctccgatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagcc 333  Q
    ||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  33330042 tttgcttccagcaaacttggctcacggcatctccgatcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagcc 33329943  T
Q  334 aatattcaaca 344  Q
    ||| |||||||    
T  33329942 aattttcaaca 33329932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 34 - 344
Target Start/End: Complemental strand, 33335739 - 33335429
Alignment:
Q  34 tctcaaggttgtcttgaggttctctccaaaaatgcacaagaacactttaaatactagtcctgccctgaagaattcgagccacgatttccctagatcgtgt 133  Q
    ||||||||||||||| ||||| ||| |||||| ||||| ||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  33335739 tctcaaggttgtcttaaggttgtcttcaaaaaagcacatgaacactttaaatactagtcctgccctgaagaaatcgtgccacgatttccctagatcgtgt 33335640  T
Q  134 cacgatgtgcaacgctccccaagttgaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgat 233  Q
    |||||| ||||||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  33335639 cacgatctgcaacggtccccaggttgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgat 33335540  T
Q  234 tttgcttccagcaaacttggctcactgcctctccgatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagcc 333  Q
    ||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  33335539 tttgcttccagcaaacttggctcacggcatctccgatcgtgtcacgattgccaaatcgcgaaacgattcctctgttcttccaaaccacaaatttgaagcc 33335440  T
Q  334 aatattcaaca 344  Q
    ||| |||||||    
T  33335439 aattttcaaca 33335429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 50 - 344
Target Start/End: Original strand, 16839037 - 16839331
Alignment:
Q  50 aggttctctccaaaaatgcacaagaacactttaaatactagtcctgccctgaagaattcgagccacgatttccctagatcgtgtcacgatgtgcaacgct 149  Q
    |||||||||||||||| |||||||||||||||| |||||||||||||||||||||| ||| | ||||||||||||||||||||||||||| ||||||| |    
T  16839037 aggttctctccaaaaaagcacaagaacactttatatactagtcctgccctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggt 16839136  T
Q  150 ccccaagttgaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaac 249  Q
    ||| | |||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  16839137 cccaaggttgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaac 16839236  T
Q  250 ttggctcactgcctctccgatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaatattcaaca 344  Q
    ||||||||| || ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  16839237 ttggctcacggcatctccgatcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaattttcaaca 16839331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 228; E-Value: 1e-125
Query Start/End: Original strand, 61 - 344
Target Start/End: Original strand, 6005724 - 6006007
Alignment:
Q  61 aaaaatgcacaagaacactttaaatactagtcctgccctgaagaattcgagccacgatttccctagatcgtgtcacgatgtgcaacgctccccaagttga 160  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| ||||||| |||||| |||||    
T  6005724 aaaaaagcacaagaacactttaaatactagtcctgccctgaagaaatcgtgccacgatttccctagatcgtgtcacgatctgcaacggtccccaggttga 6005823  T
Q  161 ccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcactg 260  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||  |    
T  6005824 ccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcatgg 6005923  T
Q  261 cctctccgatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaatattcaaca 344  Q
    | ||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| |||||||    
T  6005924 catctccgatcgtgtcacgattgccaaatcgcgacacgattcctctgtttttccaaaccacaaatttgaagccaattttcaaca 6006007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 67 - 336
Target Start/End: Original strand, 5343788 - 5344057
Alignment:
Q  67 gcacaagaacactttaaatactagtcctgccctgaagaattcgagccacgatttccctagatcgtgtcacgatgtgcaacgctccccaagttgaccagtc 166  Q
    |||||||||||||||| |||||||||| ||||||||||| ||| ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||    
T  5343788 gcacaagaacactttatatactagtccagccctgaagaaatcgtgccacgatttccctagatcgtgtcacgatatgcaacggtccccaagttgaccagtc 5343887  T
Q  167 cttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcactgcctctc 266  Q
    ||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| ||| | |||||||||||| |||| |    
T  5343888 cttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgtcacgattttgctttcagaagacttggctcacttcctccc 5343987  T
Q  267 cgatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaat 336  Q
     ||||||||||||||  |||||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  5343988 tgatcgtgtcacgatgaccaaatcgtgacacgatttctctgttctcccaaaccacaaatttgaagccaat 5344057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 45 - 336
Target Start/End: Original strand, 6438785 - 6439076
Alignment:
Q  45 tcttgaggttctctccaaaaatgcacaagaacactttaaatactagtcctgccctgaagaattcgagccacgatttccctagatcgtgtcacgatgtgca 144  Q
    |||| ||||| ||| |||||| ||||||||||||  || ||||||||||| |||||||||| ||| | ||||||||||||||||||||||||||| ||||    
T  6438785 tcttaaggttgtcttcaaaaaagcacaagaacacaatatatactagtccttccctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgca 6438884  T
Q  145 acgctccccaagttgaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccag 244  Q
    ||| | |||| ||||||||||||||||||| |||| ||||| ||||||||||||||||||| |||||||||||||||||||||||||||| ||| |||||    
T  6438885 acggttcccaggttgaccagtccttatcagtgatacttaactagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattatgcatccag 6438984  T
Q  245 caaacttggctcactgcctctccgatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaat 336  Q
    |||||||||||||| ||  |||| |||||||||||||| | |||||| | |||||||||| |||||||||| |||| |||||||||||||||    
T  6438985 caaacttggctcacggcacctccaatcgtgtcacgattccaaaatcgtgtcacgatttctatgttcttccagaccataaatttgaagccaat 6439076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 60 - 284
Target Start/End: Complemental strand, 28155354 - 28155130
Alignment:
Q  60 caaaaatgcacaagaacactttaaatactagtcctgccctgaagaattcgagccacgatttccctagatcgtgtcacgatgtgcaacgctccccaagttg 159  Q
    |||||| ||||||||||||  || ||||||||||| |||||||||| ||| | ||||||||||||||||||||||||||| ||||||| |||||| ||||    
T  28155354 caaaaaagcacaagaacacaatatatactagtcctcccctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtccccaggttg 28155255  T
Q  160 accagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcact 259  Q
    |||||||||||||||||||| |||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||  || |||||||||||||||     
T  28155254 accagtccttatcagagatacttaaccagcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacg 28155155  T
Q  260 gcctctccgatcgtgtcacgattgc 284  Q
    || |||| |||||||||||||||||    
T  28155154 gcatctcagatcgtgtcacgattgc 28155130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 56 - 338
Target Start/End: Complemental strand, 14742213 - 14741931
Alignment:
Q  56 tctccaaaaatgcacaagaacactttaaatactagtcctgccctgaagaattcgagccacgatttccctagatcgtgtcacgatgtgcaacgctccccaa 155  Q
    |||||||||| ||||||||||||  || ||||||||| | |||||||||| ||| |||||||||||| |||||||||||||||| |||||||  ||| |     
T  14742213 tctccaaaaaagcacaagaacacaatatatactagtcttcccctgaagaaatcgtgccacgatttccttagatcgtgtcacgatctgcaacggacccaag 14742114  T
Q  156 gttgaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggct 255  Q
    |||||| |||||||||||| |||| ||||| ||||||||||||||||||| |||||||| |||||||||||||||||||| || ||| |||||| | |||    
T  14742113 gttgacaagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgattttccaagatcgtgccacgatttggcgtcctgcaaac-tagct 14742015  T
Q  256 cactgcctc-tccgatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaatat 338  Q
    |||  || | |   |||||||||||||  | |||||| | ||||||||||||||||||||| ||||||||||||||||||||||    
T  14742014 cacgaccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 14741931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 60 - 338
Target Start/End: Complemental strand, 22010472 - 22010194
Alignment:
Q  60 caaaaatgcacaagaacactttaaatactagtcctgccctgaagaattcgagccacgatttccctagatcgtgtcacgatgtgcaacgctccccaagttg 159  Q
    |||||| ||||||||||||  || |||||||||   | |||||||| ||| ||||||||||||||||||||||||||||| |||||||  ||| | || |    
T  22010472 caaaaaagcacaagaacacaatatatactagtctccctctgaagaaatcgtgccacgatttccctagatcgtgtcacgatttgcaacggacccaaggtag 22010373  T
Q  160 accagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcact 259  Q
    || |||||||||||| |||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| || ||| |||||| |  || ||     
T  22010372 acaagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaac-taacttacg 22010274  T
Q  260 gcctc-tccgatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaatat 338  Q
    ||| | |   |||||||||||||  | |||||| | ||||||||||||||||||||| ||||||||||||||||||||||    
T  22010273 gccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 22010194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 61 - 338
Target Start/End: Original strand, 11857286 - 11857562
Alignment:
Q  61 aaaaatgcacaagaacactttaaatactagtcctgccctgaagaattcgagccacgatttccctagatcgtgtcacgatgtgcaacgctccccaagttga 160  Q
    ||||| ||||||||||||  || ||||||||| | | |||||||| ||| ||||||||||||| | ||||||||||||| |||||||  ||| | |||||    
T  11857286 aaaaaagcacaagaacacaatatatactagtcttcctctgaagaaatcgtgccacgatttcccaa-atcgtgtcacgatttgcaacggacccaaggttga 11857384  T
Q  161 ccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcactg 260  Q
    | |||||||||||| | || ||||| ||||||||||| ||||||| ||||||||||||||||||||||||||||| || ||| |||||| | |||||| |    
T  11857385 caagtccttatcagtgttacttaacgagcaagtttctaaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaac-tagctcacgg 11857483  T
Q  261 cctc-tccgatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaatat 338  Q
    || | |   |||||||||||||  | |||||| | ||||||||||||||||||||| ||||||||||||||||||||||    
T  11857484 ccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 11857562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 56 - 250
Target Start/End: Complemental strand, 14737353 - 14737159
Alignment:
Q  56 tctccaaaaatgcacaagaacactttaaatactagtcctgccctgaagaattcgagccacgatttccctagatcgtgtcacgatgtgcaacgctccccaa 155  Q
    |||||||||| ||||||||||||  || ||||||||| | |||||||||| ||| ||||||||||||||||||||||||||||| |||||||  ||| |     
T  14737353 tctccaaaaaagcacaagaacacaatatatactagtcttcccctgaagaaatcgtgccacgatttccctagatcgtgtcacgatctgcaacggacccaag 14737254  T
Q  156 gttgaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaact 250  Q
    |||||| |||||||||||| |||| ||||| ||||||||||||||||||| |||||||| |||||||||||||||||||| || ||| |||||||    
T  14737253 gttgacaagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgattttccaagatcgtgccacgatttggcgtcctgcaaact 14737159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 176 - 338
Target Start/End: Complemental strand, 30125185 - 30125023
Alignment:
Q  176 gatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcactgcctctc-cgatcgtg 274  Q
    |||| ||||| ||||||||||||||||||| ||||||||||||| ||||||||||||||| || ||| |||||| | |||||| ||  |||   ||||||    
T  30125185 gatacttaacgagcaagtttctgaatcgtgtcacgatttcccaaaatcgtgccacgatttggcgtcctgcaaac-tagctcacggcacctcgaaatcgtg 30125087  T
Q  275 tcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaatat 338  Q
    |||||||  | |||||| | ||||||||||||||||||||| ||||||||||||||||||||||    
T  30125086 tcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 30125023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 159 - 336
Target Start/End: Original strand, 6136363 - 6136540
Alignment:
Q  159 gaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcac 258  Q
    |||||||||||||||  |||| ||||| |||||||||||| |||||| ||||||||||||  ||||||||||||||||    || |||| | | ||||||    
T  6136363 gaccagtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgatttcccacaatcgtgccacgattttcacccctgcaaccctagctcac 6136462  T
Q  259 tgcctctccgatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaat 336  Q
     || ||    |||||||| ||||| | |||||| | ||||||||| ||||||||||||||||||||||||||| ||||    
T  6136463 ggcatccgaaatcgtgtctcgattccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaat 6136540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 158 - 250
Target Start/End: Original strand, 5266487 - 5266579
Alignment:
Q  158 tgaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaact 250  Q
    ||||||||||||||||  |||| ||||  ||||||||||||||||||| ||||||||||||||||||||||||||||| || ||| |||||||    
T  5266487 tgaccagtccttatcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaact 5266579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 57 - 335
Target Start/End: Complemental strand, 5674515 - 5674238
Alignment:
Q  57 ctccaaaaatgcacaagaacactttaaatactagtcctgccctgaagaattcgagccacgatttccctagatcgtgtcacgatgtgca-acgctccccaa 155  Q
    |||||||  ||||||||||||||||||||||||| | | | ||||   | ||| | ||||||||||  ||||||||||||||| |||  ||| |||| |     
T  5674515 ctccaaatctgcacaagaacactttaaatactagccttcctctgatacaatcgtgtcacgatttcc--agatcgtgtcacgatttgcgtacg-tcccaag 5674419  T
Q  156 gt-tgaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggc 254  Q
    || ||||||||||||||||  |||| ||||| ||||||||||  ||||||| |||||||||||||||| ||| |||||||| ||  || ||||||   ||    
T  5674418 gtatgaccagtccttatcacggatacttaacgagcaagtttcaaaatcgtgtcacgatttcccaagattgtgtcacgatttggcaccctgcaaac-cagc 5674320  T
Q  255 tcactgcctctc-cgatcgtgtcacgattgccaaa-tcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaa 335  Q
    |||| || || |   ||| |||||||| ||||||| ||  | ||||||||||||||||||||| |||||||||||||||||||    
T  5674319 tcacggcatcacaaaatcatgtcacga-tgccaaattcatgtcacgatttctctgttcttccagaccacaaatttgaagccaa 5674238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 159 - 336
Target Start/End: Original strand, 16578917 - 16579094
Alignment:
Q  159 gaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcac 258  Q
    |||||||||||||||  |||| ||||| ||||||||||   |||||| |||||||| || | ||||||||||||||||||  || || ||| | ||||||    
T  16578917 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgccacgattttgcaccctgc-aacctagctcac 16579015  T
Q  259 tgcctctccg--atcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaat 336  Q
     | | | |||  |||||||||||||  | |||||| | ||||||||| ||||||||||| ||||||||||||||| ||||    
T  16579016 -ggcaccccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat 16579094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 159 - 336
Target Start/End: Complemental strand, 16616463 - 16616286
Alignment:
Q  159 gaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcac 258  Q
    |||||||||||||||  |||| ||||| ||||||||||   |||||| |||||||| || | ||||||||||||||||||  || |||| || | |||||    
T  16616463 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgccacgattttgcaccctgcaacctag-ctcac 16616365  T
Q  259 tgcctctccga--tcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaat 336  Q
     ||  | ||||  ||||||||||||  | |||||| | ||||||||| ||||||||||| ||||||||||||||| ||||    
T  16616364 ggcacc-ccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat 16616286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 159 - 335
Target Start/End: Original strand, 22709460 - 22709636
Alignment:
Q  159 gaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcac 258  Q
    |||||||||||||||  || | ||||| |||||||||   ||||||| |||||||||||||||||||| |||||||| ||  || ||||||   |||||     
T  22709460 gaccagtccttatcatggaaacttaacgagcaagtttgaaaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaac-cagctcat 22709558  T
Q  259 tgcctctc-cgatcgtgtcacgattgccaaa-tcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaa 335  Q
     || || |   ||||||||||| |||||||| ||| | || |||||||||||||||||| |||||||||||||||||||    
T  22709559 ggcatcacaaaatcgtgtcacg-ttgccaaattcgtgtcatgatttctctgttcttccagaccacaaatttgaagccaa 22709636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 286 - 338
Target Start/End: Original strand, 5266596 - 5266648
Alignment:
Q  286 aaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaatat 338  Q
    |||||| | ||||||||||||||||||||| ||||||||||||||||||||||    
T  5266596 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 5266648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 286 - 338
Target Start/End: Complemental strand, 14737142 - 14737090
Alignment:
Q  286 aaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaatat 338  Q
    |||||| | ||||||||||||||||||||| ||||||||||||||||||||||    
T  14737142 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 14737090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 286 - 336
Target Start/End: Complemental strand, 5017026 - 5016976
Alignment:
Q  286 aaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaat 336  Q
    |||||| | |||||||| |||||||||||||||||||||||||||||||||    
T  5017026 aaatcgtgtcacgatttttctgttcttccaaaccacaaatttgaagccaat 5016976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 286 - 336
Target Start/End: Complemental strand, 31086003 - 31085953
Alignment:
Q  286 aaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaat 336  Q
    |||||| | ||||||||||||||||||| ||||||||||||||||||||||    
T  31086003 aaatcgtgtcacgatttctctgttcttctaaaccacaaatttgaagccaat 31085953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 159 - 336
Target Start/End: Original strand, 33342503 - 33342681
Alignment:
Q  159 gaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttccca-agatcgtgccacgattttgcttccagcaaacttggctca 257  Q
    |||||||||||||||  |||| ||||| |||||||||||  |||||| |||||||||||| | |||||||||||||||     || |||| | | |||||    
T  33342503 gaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgatttcccagaaatcgtgccacgatttgcacccctgcaaccctagctca 33342602  T
Q  258 ctgcctctccgatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaat 336  Q
    | || ||    |||| ||| ||||  | |||||| | |||||||||  |||||||||||||||||||||||||| ||||    
T  33342603 cggcatccgaaatcgcgtcgcgatcccaaaatcgtgtcacgatttccatgttcttccaaaccacaaatttgaagacaat 33342681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 159 - 331
Target Start/End: Complemental strand, 34166851 - 34166678
Alignment:
Q  159 gaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgattt-cccaagatcgtgccacgattttgcttccagcaaacttggctca 257  Q
    |||||||||||||||  |||| ||||| |||||||||||  |||||| |||||||| ||||| |||||| ||||||||     || |||| | |  ||||    
T  34166851 gaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacgatttgcacccctgcaaccctaactca 34166752  T
Q  258 ctgcctctccgatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaag 331  Q
    | || ||    |||| ||||||||  | |||||| | ||||||||| |||||||||||||||||||||||||||    
T  34166751 cggcatccgaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaag 34166678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 159 - 235
Target Start/End: Complemental strand, 6027018 - 6026942
Alignment:
Q  159 gaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattt 235  Q
    |||| ||||||||||  |||| ||||| |||||||||||| |||||| |||||||| || | |||||||||||||||    
T  6027018 gaccggtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgattttcccaaatcgtgccacgattt 6026942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 269 - 344
Target Start/End: Original strand, 23896882 - 23896957
Alignment:
Q  269 atcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaatattcaaca 344  Q
    |||||||||||||  | |||||| | |||||||| ||||||||| |||||||||||||||||| |||  |||||||    
T  23896882 atcgtgtcacgatgccaaaatcgtgtcacgatttttctgttctttcaaaccacaaatttgaaggcaaatttcaaca 23896957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 286 - 344
Target Start/End: Original strand, 24714938 - 24714997
Alignment:
Q  286 aaatcgcgacacgatttctctgttcttccaaaccac-aaatttgaagccaatattcaaca 344  Q
    |||||| | ||||||||||||||| ||||||||||| ||||||||||||||| |||||||    
T  24714938 aaatcgtgtcacgatttctctgtttttccaaaccacaaaatttgaagccaattttcaaca 24714997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 159 - 346
Target Start/End: Complemental strand, 27647652 - 27647465
Alignment:
Q  159 gaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcac 258  Q
    ||||||||  |||||  |||| ||||| ||||||||||   |||||| ||||||||| ||  ||||||||||||||||||  || |||| || | |||||    
T  27647652 gaccagtcaatatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttctcacaatcgtgccacgattttgcaccctgcaacctag-ctcac 27647554  T
Q  259 tgcctctccga--tcgtgtcacgattgcca-aatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaatattcaacagt 346  Q
     ||  | ||||  |||||||||||| |||| ||||| | ||||||||| ||||||||||| ||||||||||||||| ||| | ||||||||    
T  27647553 ggcacc-ccgaaatcgtgtcacgat-gccacaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaaactcaacagt 27647465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 159 - 235
Target Start/End: Complemental strand, 13151034 - 13150957
Alignment:
Q  159 gaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacga-tttcccaagatcgtgccacgattt 235  Q
    |||||||||||||||  |||| ||||| |||||||||||  |||||| ||||| |||||||| |||||| ||||||||    
T  13151034 gaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacgattt 13150957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 299 - 336
Target Start/End: Original strand, 18234663 - 18234700
Alignment:
Q  299 atttctctgttcttccaaaccacaaatttgaagccaat 336  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  18234663 atttctctgttcttccaaaccacaaatttaaagccaat 18234700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 295 - 344
Target Start/End: Complemental strand, 21272510 - 21272461
Alignment:
Q  295 cacgatttctctgttcttccaaaccacaaatttgaagccaatattcaaca 344  Q
    ||||||||| |||||| |||||| |||||||||||||||||||| |||||    
T  21272510 cacgatttccctgttcctccaaaacacaaatttgaagccaatatacaaca 21272461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 159 - 336
Target Start/End: Complemental strand, 25420981 - 25420804
Alignment:
Q  159 gaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcac 258  Q
    |||||||||||||||  |||| ||||| ||||||||||   |||||| |||||||| || | |||||||||||||||     || |||| | | ||||||    
T  25420981 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgccacgatttgcacccctgcaaccctagctcac 25420882  T
Q  259 tgcctctccgatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaat 336  Q
     || ||    ||||||||||| |  | |||| | | ||||||||| ||||||||||| ||||||||||||||| ||||    
T  25420881 ggcatccgaaatcgtgtcacggtcccaaaattgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat 25420804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 159 - 235
Target Start/End: Complemental strand, 34164629 - 34164552
Alignment:
Q  159 gaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacga-tttcccaagatcgtgccacgattt 235  Q
    |||||||||||||||  |||| ||||| |||||||||||  |||||| ||||| |||||||| |||||| ||||||||    
T  34164629 gaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgacacgattt 34164552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 335
Target Start/End: Original strand, 2171941 - 2172095
Alignment:
Q  181 ttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcactgcctctc-cgatcgtgtcacg 279  Q
    ||||| |||||||||   ||||||| |||||||||||||||||||| |||||||| ||  || ||||||   |||||| || || |   |||||||||||    
T  2171941 ttaacgagcaagttttacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaac-cagctcacggcatcacgaaatcgtgtcacg 2172039  T
Q  280 attgccaaa-tcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaa 335  Q
    | ||||||| ||  | | ||||||||||||||||||| |||||||||||||| ||||    
T  2172040 a-tgccaaattcatgtcccgatttctctgttcttccagaccacaaatttgaaaccaa 2172095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 159 - 336
Target Start/End: Complemental strand, 16554638 - 16554461
Alignment:
Q  159 gaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcac 258  Q
    |||||||||||||||  |||| ||||| ||||||||||   |||||| |||||||| || | |||||||||| |||||||  || | || || | |||||    
T  16554638 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgccacaattttgcaccctgtaacctag-ctcac 16554540  T
Q  259 tgcctctccga--tcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaat 336  Q
     ||  | ||||  ||||||||||||  | |||||  | ||||||||| ||||||||||| ||||||||||||||| ||||    
T  16554539 ggcacc-ccgaaatcgtgtcacgataccaaaatcatgtcacgatttccctgttcttccagaccacaaatttgaagacaat 16554461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 159 - 336
Target Start/End: Complemental strand, 16631194 - 16631017
Alignment:
Q  159 gaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcac 258  Q
    |||||||||||||||  |||| ||||| ||||||||||   |||||| |||||||| || | |||||||||| |||||||  || | || || | |||||    
T  16631194 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgccacaattttgcaccctgtaacctag-ctcac 16631096  T
Q  259 tgcctctccga--tcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaat 336  Q
     ||  | ||||  ||||||||||||  | |||||  | ||||||||| ||||||||||| ||||||||||||||| ||||    
T  16631095 ggcacc-ccgaaatcgtgtcacgataccaaaatcatgtcacgatttccctgttcttccagaccacaaatttgaagacaat 16631017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 269 - 331
Target Start/End: Original strand, 6097911 - 6097973
Alignment:
Q  269 atcgtgtcacgattgccaaat-cgcgacacgatttctctgttcttccaaaccacaaatttgaag 331  Q
    ||||||||||||| ||||||| || | || |||||| |||||||||||||||||||||||||||    
T  6097911 atcgtgtcacgat-gccaaattcgtgtcaggatttccctgttcttccaaaccacaaatttgaag 6097973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 269 - 331
Target Start/End: Complemental strand, 13150923 - 13150861
Alignment:
Q  269 atcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaag 331  Q
    |||| ||||||||  | |||||| | ||||||||| |||||||||||| ||||||||||||||    
T  13150923 atcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaagccacaaatttgaag 13150861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 295 - 336
Target Start/End: Complemental strand, 6026882 - 6026841
Alignment:
Q  295 cacgatttctctgttcttccaaaccacaaatttgaagccaat 336  Q
    ||||||||| || |||||||||||||||||||||||| ||||    
T  6026882 cacgatttccctattcttccaaaccacaaatttgaagacaat 6026841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 303 - 336
Target Start/End: Complemental strand, 28155130 - 28155097
Alignment:
Q  303 ctctgttcttccaaaccacaaatttgaagccaat 336  Q
    ||||||||||||| ||||||||||||||||||||    
T  28155130 ctctgttcttccagaccacaaatttgaagccaat 28155097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 295 - 331
Target Start/End: Complemental strand, 26253638 - 26253602
Alignment:
Q  295 cacgatttctctgttcttccaaaccacaaatttgaag 331  Q
    |||||||||||||||||| || |||||||||||||||    
T  26253638 cacgatttctctgttctttcagaccacaaatttgaag 26253602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 295 - 331
Target Start/End: Complemental strand, 34151876 - 34151840
Alignment:
Q  295 cacgatttctctgttcttccaaaccacaaatttgaag 331  Q
    ||||||||| |||||||||||| ||||||||||||||    
T  34151876 cacgatttccctgttcttccaagccacaaatttgaag 34151840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 295 - 331
Target Start/End: Complemental strand, 34164492 - 34164456
Alignment:
Q  295 cacgatttctctgttcttccaaaccacaaatttgaag 331  Q
    ||||||||| |||||||||||| ||||||||||||||    
T  34164492 cacgatttccctgttcttccaagccacaaatttgaag 34164456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 250; Significance: 1e-139; HSPs: 53)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 45 - 346
Target Start/End: Original strand, 2785664 - 2785965
Alignment:
Q  45 tcttgaggttctctccaaaaatgcacaagaacactttaaatactagtcctgccctgaagaattcgagccacgatttccctagatcgtgtcacgatgtgca 144  Q
    |||| ||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| ||||    
T  2785664 tcttaaggttatctccaaaaaagcacaagaacactttaaatactagtcctgccctgaagaaatcgtgccacgatttccctagatcgtgtcacgatctgca 2785763  T
Q  145 acgctccccaagttgaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccag 244  Q
    |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  2785764 acgctccccaggttgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccag 2785863  T
Q  245 caaacttggctcactgcctctccgatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaatattcaaca 344  Q
    |||||||||||||| || ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  2785864 caaacttggctcacggcatctccgatcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaattttcaaca 2785963  T
Q  345 gt 346  Q
    ||    
T  2785964 gt 2785965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 45 - 344
Target Start/End: Original strand, 33791605 - 33791904
Alignment:
Q  45 tcttgaggttctctccaaaaatgcacaagaacactttaaatactagtcctgccctgaagaattcgagccacgatttccctagatcgtgtcacgatgtgca 144  Q
    |||| ||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| ||||    
T  33791605 tcttaaggttatctccaaaaaagcacaagaacactttaaatactagtcctgccctgaagaaatcgtgccacgatttccctagatcgtgtcacgatctgca 33791704  T
Q  145 acgctccccaagttgaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccag 244  Q
    ||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  33791705 acggtccccaggttgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccag 33791804  T
Q  245 caaacttggctcactgcctctccgatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaatattcaaca 344  Q
    |||||||||||||| || ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  33791805 caaacttggctcacggcatctccgatcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaattttcaaca 33791904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 45 - 344
Target Start/End: Original strand, 33768473 - 33768772
Alignment:
Q  45 tcttgaggttctctccaaaaatgcacaagaacactttaaatactagtcctgccctgaagaattcgagccacgatttccctagatcgtgtcacgatgtgca 144  Q
    |||| ||||| |||||||||| |||||||||||||||||||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||| ||||    
T  33768473 tcttaaggttatctccaaaaaagcacaagaacactttaaatactagtcatgccctgaagaaatcgtgccacgatttccctagatcgtgtcacgatctgca 33768572  T
Q  145 acgctccccaagttgaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccag 244  Q
    ||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  33768573 acggtccccaggttgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccag 33768672  T
Q  245 caaacttggctcactgcctctccgatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaatattcaaca 344  Q
    |||||||||||||| || ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  33768673 caaacttggctcacggcatctccgatcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaattttcaaca 33768772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 50 - 344
Target Start/End: Complemental strand, 31396783 - 31396489
Alignment:
Q  50 aggttctctccaaaaatgcacaagaacactttaaatactagtcctgccctgaagaattcgagccacgatttccctagatcgtgtcacgatgtgcaacgct 149  Q
    ||||| ||| |||||| ||||||||||||||||||||| ||||||||||||||||| ||| | ||||||| ||||||||||||||||||| ||||||| |    
T  31396783 aggttgtcttcaaaaaagcacaagaacactttaaatacaagtcctgccctgaagaaatcgtgtcacgattaccctagatcgtgtcacgatctgcaacggt 31396684  T
Q  150 ccccaagttgaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaac 249  Q
    ||||| |||||||||||||||||||||| | ||||||| ||||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  31396683 ccccaggttgaccagtccttatcagagaaacttaaccaacaagtgtctgaatcgtgtcacgatttcccaagatcgtggcacgattttgcttccagcaaac 31396584  T
Q  250 ttggctcactgcctctccgatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaatattcaaca 344  Q
    || ||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||| |||||||||||||||||||||||| |||||||    
T  31396583 ttagctcactgcctctccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaattttcaaca 31396489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 50 - 344
Target Start/End: Complemental strand, 31401640 - 31401346
Alignment:
Q  50 aggttctctccaaaaatgcacaagaacactttaaatactagtcctgccctgaagaattcgagccacgatttccctagatcgtgtcacgatgtgcaacgct 149  Q
    ||||| ||| |||||| ||||||||||||||||||||| ||||||||||||||||| ||| | ||||||| ||||||||||||||||||| ||||||| |    
T  31401640 aggttgtcttcaaaaaagcacaagaacactttaaatacaagtcctgccctgaagaaatcgtgtcacgattaccctagatcgtgtcacgatctgcaacggt 31401541  T
Q  150 ccccaagttgaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaac 249  Q
    ||||| |||||||||||||||||||||| | |||| ||||||||||||||||| || |||||||||||||||||||| ||||||||||||||||||||||    
T  31401540 ccccaggttgaccagtccttatcagagaaacttaagcagcaagtttctgaatcatgtcacgatttcccaagatcgtggcacgattttgcttccagcaaac 31401441  T
Q  250 ttggctcactgcctctccgatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaatattcaaca 344  Q
    || ||||||||||||||||||||||||||||||||||||||| ||||||||| |||| |||| |||||||||||||||||||||||| |||||||    
T  31401440 ttagctcactgcctctccgatcgtgtcacgattgccaaatcgtgacacgattcctctattctcccaaaccacaaatttgaagccaattttcaaca 31401346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 180; E-Value: 5e-97
Query Start/End: Original strand, 45 - 336
Target Start/End: Complemental strand, 28807374 - 28807083
Alignment:
Q  45 tcttgaggttctctccaaaaatgcacaagaacactttaaatactagtcctgccctgaagaattcgagccacgatttccctagatcgtgtcacgatgtgca 144  Q
    |||| ||||||||| |||||| |||||||||||   || |||||||||||||||||||||| ||| ||||||| ||||||||||||||||||||| ||||    
T  28807374 tcttaaggttctcttcaaaaaagcacaagaacataatatatactagtcctgccctgaagaaatcgtgccacgagttccctagatcgtgtcacgatctgca 28807275  T
Q  145 acgctccccaagttgaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccag 244  Q
    ||| |||||| |||||||||||||||||||||||| ||||||| |||||||||| |||||| ||||||||||||||||||||||||||||||||  || |    
T  28807274 acggtccccaggttgaccagtccttatcagagatacttaaccaacaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctg 28807175  T
Q  245 caaacttggctcactgcctctccgatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaat 336  Q
    |||||||||||||| || |||| ||||||||||||||||| |||||| ||||||||| ||||||||||||| |||| |||||||||||||||    
T  28807174 caaacttggctcacggcatctcagatcgtgtcacgattgcaaaatcgtgacacgattcctctgttcttccagaccataaatttgaagccaat 28807083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 45 - 344
Target Start/End: Complemental strand, 37561245 - 37560947
Alignment:
Q  45 tcttgaggttctctccaaaaatgcacaagaacactttaaatactagtcctgccctgaagaattcgagccacgatttccctagatcgtgtcacgatgtgca 144  Q
    |||| ||||||||| |||||| ||||||||||||  || |||||||||||||||||||||| ||| ||||||||||||||||||| ||||||||| ||||    
T  37561245 tcttaaggttctcttcaaaaaagcacaagaacacaatatatactagtcctgccctgaagaaatcgtgccacgatttccctagatcatgtcacgatctgca 37561146  T
Q  145 acgctccccaagttgaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccag 244  Q
    ||| |||||| ||| |||||||||||||||||||| |||||||||||||||||| |||||| |||||||||||||||||||||||||| ||||| ||||     
T  37561145 acggtccccaggttaaccagtccttatcagagatacttaaccagcaagtttctggatcgtgtcacgatttcccaagatcgtgccacga-tttgcctccat 37561047  T
Q  245 c-aaacttggctcactgcctctccgatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaatattcaac 343  Q
    | ||||||||||||| || |||| |||||||||||||||  ||||||| | ||||||| ||||||||||||| ||||||||||||||||||| |||||||    
T  37561046 caaaacttggctcacggcatctcagatcgtgtcacgattatcaaatcgtgtcacgattactctgttcttccagaccacaaatttgaagccaa-attcaac 37560948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 45 - 344
Target Start/End: Complemental strand, 37556423 - 37556125
Alignment:
Q  45 tcttgaggttctctccaaaaatgcacaagaacactttaaatactagtcctgccctgaagaattcgagccacgatttccctagatcgtgtcacgatgtgca 144  Q
    |||| ||||||||| |||||| ||||||||||||  || |||||||||||||||||||||| ||| |||| |||||||||||||||||||||||| ||||    
T  37556423 tcttaaggttctcttcaaaaaagcacaagaacacaatatatactagtcctgccctgaagaaatcgtgccatgatttccctagatcgtgtcacgatctgca 37556324  T
Q  145 acgctccccaagttgaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccag 244  Q
    ||| ||| |  ||| |||||||||||||||||||| |||||||||||||||||  |||||| ||| |||||||||||||||||||||| ||||| ||||     
T  37556323 acggtcctctggttaaccagtccttatcagagatacttaaccagcaagtttctagatcgtgtcacaatttcccaagatcgtgccacga-tttgcctccat 37556225  T
Q  245 c-aaacttggctcactgcctctccgatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaatattcaac 343  Q
    | ||||||||||||| || |||| ||||||||||||||| |||||||| | ||||||| ||||||||||||| ||||||||||||||||||| |||||||    
T  37556224 caaaacttggctcacggcatctcagatcgtgtcacgattaccaaatcgtgtcacgattactctgttcttccagaccacaaatttgaagccaa-attcaac 37556126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 60 - 338
Target Start/End: Original strand, 15044997 - 15045274
Alignment:
Q  60 caaaaatgcacaagaacactttaaatactagtcctgccctgaagaattcgagccacgatttccctagatcgtgtcacgatgtgcaacgctccccaagttg 159  Q
    |||||| ||||||||||||  || ||||||||| | |||||||||| ||| ||||||||||||||||||||||||||||| |||||||  ||||| ||||    
T  15044997 caaaaaagcacaagaacacaatatatactagtcttcccctgaagaaatcgtgccacgatttccctagatcgtgtcacgatctgcaacggaccccaggttg 15045096  T
Q  160 accagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcact 259  Q
    ||||||||||||||| |||| ||||  ||||||||||||||||||| ||||||||||||||||||||||||||||| || ||| |||||| ||||||||     
T  15045097 accagtccttatcagtgatacttaatgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaac-tggctcacg 15045195  T
Q  260 gcctctccgatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaatat 338  Q
    || ||||  |||||||||||||| | |||||| | |||||||||||||||||||||||| |||||||||||||||||||    
T  15045196 gcatctcaaatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccaaactacaaatttgaagccaatat 15045274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 61 - 338
Target Start/End: Complemental strand, 1456920 - 1456643
Alignment:
Q  61 aaaaatgcacaagaacactttaaatactagtcctgccctgaagaattcgagccacgatttccctagatcgtgtcacgatgtgcaacgctccccaagttga 160  Q
    ||||| ||||||||||||  || ||||||||| | | || ||||| ||| ||||||||||||| ||| ||||||||||| |||| |   ||| | || ||    
T  1456920 aaaaaagcacaagaacacaatatatactagtcttcctctaaagaaatcgtgccacgatttcccaagaccgtgtcacgatttgcatctgacccaaggtaga 1456821  T
Q  161 ccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcactg 260  Q
    | |||||||||||| |||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| || ||| | |||| | |||||| |    
T  1456820 caagtccttatcagggatacttaacaagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgtaaac-tagctcacgg 1456722  T
Q  261 cctc-tccgatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaatat 338  Q
    || | |   |||||||||||||  | |||||| | ||||||||||||||||||||| ||||||||||||||||||||||    
T  1456721 ccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 1456643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 61 - 338
Target Start/End: Original strand, 27450128 - 27450404
Alignment:
Q  61 aaaaatgcacaagaacactttaaatactagtcctgccctgaagaattcgagccacgatttccctagatcgtgtcacgatgtgcaacgctccccaagttga 160  Q
    ||||| ||||||||||||  || ||||||| | | | |||||| | ||| ||||||||||||| | ||||||||||||| |||  |   ||| | || ||    
T  27450128 aaaaaagcacaagaacacaatatatactagccttcctctgaagcaatcgtgccacgatttcccaa-atcgtgtcacgatttgcgtctgacccaaggtaga 27450226  T
Q  161 ccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcactg 260  Q
    |||||||||||||| |||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| || ||| |||||| | |||||| |    
T  27450227 ccagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaac-tagctcacgg 27450325  T
Q  261 cctc-tccgatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaatat 338  Q
    || | |   |||||||||||||  | |||||| | ||||||||||||||||||||| ||||||||||||||||||||||    
T  27450326 ccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 27450404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 61 - 338
Target Start/End: Original strand, 27445285 - 27445561
Alignment:
Q  61 aaaaatgcacaagaacactttaaatactagtcctgccctgaagaattcgagccacgatttccctagatcgtgtcacgatgtgcaacgctccccaagttga 160  Q
    ||||| ||||||||||||  || ||||||| | | | |||||| | ||| ||||||||||||| | ||||||||||||| |||  |   ||| | || ||    
T  27445285 aaaaaagcacaagaacacaatatatactagccttcctctgaagcaatcgtgccacgatttcccaa-atcgtgtcacgatttgcgtctgacccaaggtaga 27445383  T
Q  161 ccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcactg 260  Q
    |||||||||||||| |||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| || ||| |||||| | |||||| |    
T  27445384 ccagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaac-tagctcacgg 27445482  T
Q  261 cctc-tccgatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaatat 338  Q
    || | |   |||||||||||||  | |||||| | ||||||||||||||||||| | ||||||||||||||||||||||    
T  27445483 ccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttctagaccacaaatttgaagccaatat 27445561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 157 - 338
Target Start/End: Original strand, 30631762 - 30631943
Alignment:
Q  157 ttgaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctc 256  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||||||| ||||||||||||| |||||| |||||||| || ||| |||||| ||||||    
T  30631762 ttgaccagtccttatcagagatacttaacgagcaagtttctgaatcgtgtcacgatttcccaaaatcgtgtcacgatttggcgtcctgcaaac-tggctc 30631860  T
Q  257 actgcctctc-cgatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaatat 338  Q
    || ||  |||   |||||||||||||  | |||||| | ||||||||||||||||||||| ||||||||||||||||||||||    
T  30631861 acggcacctcgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 30631943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 159 - 338
Target Start/End: Original strand, 43599133 - 43599313
Alignment:
Q  159 gaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcac 258  Q
    |||||||||||||||| |||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| || ||| |||||| | ||||||    
T  43599133 gaccagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaac-tagctcac 43599231  T
Q  259 tgcctc--tccgatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaatat 338  Q
     ||| |  |   ||||||||||||   | |||||| | ||||||||||||||||||||| ||||||||||||||||||||||    
T  43599232 ggcccccttgaaatcgtgtcacgacgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 43599313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 159 - 338
Target Start/End: Original strand, 43604625 - 43604805
Alignment:
Q  159 gaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcac 258  Q
    |||||||||||||||| |||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| || ||| |||||| | ||||||    
T  43604625 gaccagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaac-tagctcac 43604723  T
Q  259 tgcctc--tccgatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaatat 338  Q
     ||| |  |   ||||||||||||   | |||||| | ||||||||||||||||||||| ||||||||||||||||||||||    
T  43604724 ggcccccttgaaatcgtgtcacgacgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 43604805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 159 - 338
Target Start/End: Original strand, 43610117 - 43610297
Alignment:
Q  159 gaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcac 258  Q
    |||||||||||||||| |||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| || ||| |||||| | ||||||    
T  43610117 gaccagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaac-tagctcac 43610215  T
Q  259 tgcctc--tccgatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaatat 338  Q
     ||| |  |   ||||||||||||   | |||||| | ||||||||||||||||||||| ||||||||||||||||||||||    
T  43610216 ggcccccttgaaatcgtgtcacgacgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 43610297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 165 - 338
Target Start/End: Complemental strand, 29402728 - 29402555
Alignment:
Q  165 tccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcactgcctc 264  Q
    |||||||||| |||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| || ||| |||||| | |||||  ||| |    
T  29402728 tccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaac-tagctcatggccac 29402630  T
Q  265 -tccgatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaatat 338  Q
     |   |||||| ||||||  | |||||| | ||||||||||||||||||||| ||||||||||||||||||||||    
T  29402629 ttgaaatcgtgccacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 29402555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 62 - 250
Target Start/End: Original strand, 31180568 - 31180756
Alignment:
Q  62 aaaatgcacaagaacactttaaatactagtcctgccctgaagaattcgagccacgatttccctagatcgtgtcacgatgtgcaacgctccccaagttgac 161  Q
    |||| ||||||||||||  || ||||||||| | | |||||| | ||| ||||||||||||| ||||| ||||||||| |||  |   ||| | ||||||    
T  31180568 aaaaagcacaagaacacaatatatactagtcttcctctgaagcaatcgtgccacgatttcccaagatcatgtcacgatttgcgtctgacccaaggttgac 31180667  T
Q  162 cagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaact 250  Q
    ||||||||||||| |||| ||||| || |||| ||||||||||| ||||||||||||||||||||||||||||| || ||| |||||||    
T  31180668 cagtccttatcagtgatacttaacgagaaagtctctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaact 31180756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 159 - 250
Target Start/End: Original strand, 43592688 - 43592779
Alignment:
Q  159 gaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaact 250  Q
    |||||||||||||||| |||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| || ||| |||||||    
T  43592688 gaccagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaact 43592779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 159 - 336
Target Start/End: Complemental strand, 16546400 - 16546223
Alignment:
Q  159 gaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcac 258  Q
    |||||||||||||||  |||| ||||| ||||||||||   |||||| |||||||| || | |||||| ||||| |||||  || |||| | | ||||||    
T  16546400 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgaatttgcaccctgcaaccctagctcac 16546301  T
Q  259 tgcctctccgatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaat 336  Q
     ||  |||| |||||||||||||| | |||||| | ||||||||| ||||||||||||||||||||||||||| ||||    
T  16546300 ggcacctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccaaaccacaaatttgaagacaat 16546223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 159 - 336
Target Start/End: Complemental strand, 16544178 - 16544001
Alignment:
Q  159 gaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcac 258  Q
    |||||||||||||||  |||| ||||| ||||||||||   |||||| |||||||| || | |||||| ||||| |||||  || | || | | ||||||    
T  16544178 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgaatttgcaccctgtaaccctagctcac 16544079  T
Q  259 tgcctctccgatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaat 336  Q
     ||  |||| |||||||||||||| | |||||| | ||||||||| ||||||||||||||||||||||||||| ||||    
T  16544078 agcacctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccaaaccacaaatttgaagacaat 16544001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 159 - 336
Target Start/End: Complemental strand, 40379862 - 40379685
Alignment:
Q  159 gaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcac 258  Q
    |||||||||||||||  |||| ||||| ||||||||||   |||||| |||||||| || | |||||| ||||| |||||  || |||| | | ||||||    
T  40379862 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgaatttgcaccctgcaaccctagctcac 40379763  T
Q  259 tgcctctccgatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaat 336  Q
     ||  |||| |||||||||||||| | |||||| | ||||||||| ||||||||||| ||||||||||||||| ||||    
T  40379762 ggcacctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaat 40379685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 57 - 335
Target Start/End: Original strand, 24136198 - 24136475
Alignment:
Q  57 ctccaaaaatgcacaagaacactttaaatactagtcctgccctgaagaattcgagccacgatttccctagatcgtgtcacgatgtgca-acgctccccaa 155  Q
    |||||||||||||||||||||||||| |||||||   | | ||||   | ||| ||||||||||||  ||||||||||||||| |||  ||| |||| |     
T  24136198 ctccaaaaatgcacaagaacactttatatactagctttcctctgatacaatcgtgccacgatttcc--agatcgtgtcacgatttgcgtacg-tcccaag 24136294  T
Q  156 gt-tgaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggc 254  Q
    || ||||||||||||||||  |||| ||||| |||||||||   ||||||| |||||||||||||||||||| |||||||| ||  || |||||| | ||    
T  24136295 gtatgaccagtccttatcaaggatacttaacgagcaagtttgaaaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaac-tagc 24136393  T
Q  255 tcactgcctctc-cgatcgtgtcacgattgccaaa-tcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaa 335  Q
    |||| || || |   || ||||||||| ||||||| ||| | |||||||||| |||||||||| |||||||||||||| ||||    
T  24136394 tcacggcatcacgaaattgtgtcacga-tgccaaattcgtgtcacgatttctgtgttcttccagaccacaaatttgaaaccaa 24136475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 159 - 336
Target Start/End: Complemental strand, 40382073 - 40381896
Alignment:
Q  159 gaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcac 258  Q
    |||||||||||||||  |||| ||||| ||||||||||   |||||| |||||||| || | |||||| ||||| |||||  || |||| | | ||||||    
T  40382073 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgaatttgcaccctgcaaccctagctcac 40381974  T
Q  259 tgcctctccgatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaat 336  Q
     ||  |||| |||||||||||||| | |||||| | ||||||||| |||||||| || ||||||||||||||| ||||    
T  40381973 ggcacctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttctttcagaccacaaatttgaagacaat 40381896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 159 - 331
Target Start/End: Complemental strand, 25077890 - 25077718
Alignment:
Q  159 gaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcac 258  Q
    |||||||||||||||  |||| ||||| |||||||||||| |||||| ||||||||||||  |||||| ||||||||     ||  ||| | | ||||||    
T  25077890 gaccagtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgatttcccacaatcgtgacacgatttgcacccctacaaccctagctcac 25077791  T
Q  259 tgcctctccgatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaag 331  Q
     ||  |||| |||| ||||||||  | |||||| | ||||||||| ||||||||||| |||||||||||||||    
T  25077790 ggcacctccaatcgcgtcacgatcccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 25077718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 159 - 331
Target Start/End: Complemental strand, 25135859 - 25135687
Alignment:
Q  159 gaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcac 258  Q
    |||||||||||||||  |||| ||||| |||||||||||| |||||| ||||||||||||  |||||| ||||||||     ||  ||| | | ||||||    
T  25135859 gaccagtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgatttcccacaatcgtgacacgatttgcacccctacaaccctagctcac 25135760  T
Q  259 tgcctctccgatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaag 331  Q
     ||  |||| |||| ||||||||  | |||||| | ||||||||| ||||||||||| |||||||||||||||    
T  25135759 ggcacctccaatcgcgtcacgatcccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 25135687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 286 - 344
Target Start/End: Original strand, 14520796 - 14520854
Alignment:
Q  286 aaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaatattcaaca 344  Q
    |||||| | |||||||||||||||||||||||||||||||||||||||||| |||||||    
T  14520796 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaattttcaaca 14520854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 269 - 335
Target Start/End: Complemental strand, 9352882 - 9352816
Alignment:
Q  269 atcgtgtcacgattgcca-aatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaa 335  Q
    ||||||||||||| |||| ||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  9352882 atcgtgtcacgat-gccacaatcgcgtcacgatttctctgttctttcaaaccacaaatttgaagccaa 9352816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 159 - 335
Target Start/End: Complemental strand, 26177651 - 26177475
Alignment:
Q  159 gaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcac 258  Q
    |||||||||||||||  || | ||||| |||||||||   ||||||| |||||||||||| ||||||| |||||||| ||  || ||||||  | |||||    
T  26177651 gaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccatgatcgtgtcacgatttggcaccctgcaaaccag-ctcac 26177553  T
Q  259 tgcctctccga-tcgtgtcacgattgccaaat-cgcgacacgatttctctgttcttccaaaccacaaatttgaagccaa 335  Q
     || || |  | |||||||||||| ||||||| || | ||||||||| ||||||||||| |||||||||||||||||||    
T  26177552 ggcatcacgaaatcgtgtcacgat-gccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaa 26177475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 159 - 336
Target Start/End: Complemental strand, 10593027 - 10592851
Alignment:
Q  159 gaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcac 258  Q
    |||||||||||||||  |||| ||||| ||||||||||   |||||| |||||||| || | ||||||||||||||||||  || |||| ||   |||||    
T  10593027 gaccagtccttatcacggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgccacgattttgcaccctgcaacctat-ctcac 10592929  T
Q  259 tgcctctccgatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaat 336  Q
     ||  |    |||||||||||||  | |||||| | ||||||||| ||||||||||| ||||||||||||||| ||||    
T  10592928 ggcacccggaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat 10592851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 159 - 336
Target Start/End: Original strand, 22536668 - 22536845
Alignment:
Q  159 gaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcac 258  Q
    |||||||||||||||  |||| ||||| ||||||||||   |||||| ||||||||||||  || |||||||||||||||  || || ||| | ||||||    
T  22536668 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaattgtgccacgattttgcaccctgc-aacctagctcac 22536766  T
Q  259 tgcctctccg--atcgtgtcacgattgcca-aatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaat 336  Q
     | | | |||  |||||||||||| ||||| ||||| | ||||||||| ||||||||||| ||||||||||||||| ||||    
T  22536767 -ggcaccccgaaatcgtgtcacga-tgccacaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat 22536845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 286 - 338
Target Start/End: Original strand, 31180773 - 31180825
Alignment:
Q  286 aaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaatat 338  Q
    |||||| | ||||||||||||||||||||| ||||||||||||||||||||||    
T  31180773 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 31180825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 286 - 338
Target Start/End: Original strand, 43592797 - 43592849
Alignment:
Q  286 aaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaatat 338  Q
    |||||| | ||||||||||||||||||||| ||||||||||||||||||||||    
T  43592797 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 43592849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 286 - 345
Target Start/End: Complemental strand, 12083708 - 12083649
Alignment:
Q  286 aaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaatattcaacag 345  Q
    |||||| | |||||||||||||||||||||||||| |||||| |||||||||| ||||||    
T  12083708 aaatcgtgtcacgatttctctgttcttccaaaccataaatttaaagccaatatacaacag 12083649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 269 - 335
Target Start/End: Complemental strand, 16407716 - 16407650
Alignment:
Q  269 atcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaa 335  Q
    |||||||||||||  | || ||| | ||||||||||||||||||||| |||||||||||||||||||    
T  16407716 atcgtgtcacgatgtcaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 16407650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 295 - 332
Target Start/End: Complemental strand, 36931892 - 36931855
Alignment:
Q  295 cacgatttctctgttcttccaaaccacaaatttgaagc 332  Q
    ||||||||||||||||||||||||||||||||||||||    
T  36931892 cacgatttctctgttcttccaaaccacaaatttgaagc 36931855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 295 - 335
Target Start/End: Complemental strand, 11916493 - 11916453
Alignment:
Q  295 cacgatttctctgttcttccaaaccacaaatttgaagccaa 335  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  11916493 cacgatttctctgttctttcaaaccacaaatttgaagccaa 11916453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 269 - 335
Target Start/End: Complemental strand, 16409152 - 16409086
Alignment:
Q  269 atcgtgtcacgattgccaaat-cgcgacacgatttctctgttcttccaaaccacaaatttgaagccaa 335  Q
    ||||||||||||| ||||||| || | |||||||||||||||||| || |||||||||||||||||||    
T  16409152 atcgtgtcacgat-gccaaattcgtgtcacgatttctctgttctttcagaccacaaatttgaagccaa 16409086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 159 - 331
Target Start/End: Original strand, 9789624 - 9789796
Alignment:
Q  159 gaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcac 258  Q
    |||||||||||||||  || | ||||| |||||||||   ||||||| ||||||||||||  |||||| |||||||| ||  || ||||||  | |||||    
T  9789624 gaccagtccttatcatggaaacttaacgagcaagttttcaaatcgtgtcacgatttcccacaatcgtgtcacgatttggcaccctgcaaaccag-ctcac 9789722  T
Q  259 tgcctctccga-tcgtgtcacgattgccaaa-tcgcgacacgatttctctgttcttccaaaccacaaatttgaag 331  Q
     || || |  | ||||||||||| ||||||| ||| | ||||||||| ||||||||||| |||||||||||||||    
T  9789723 ggcatcacgaaatcgtgtcacga-tgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaag 9789796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 269 - 335
Target Start/End: Original strand, 15465050 - 15465116
Alignment:
Q  269 atcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaa 335  Q
    |||||||||||||  | || ||| | |||||||||||||||||| || |||||||||||||||||||    
T  15465050 atcgtgtcacgataccaaattcgtgtcacgatttctctgttctttcagaccacaaatttgaagccaa 15465116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 159 - 331
Target Start/End: Original strand, 18442048 - 18442220
Alignment:
Q  159 gaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcac 258  Q
    |||||||||||||||  || | ||||| |||||||||   ||||||| ||||||||||||  |||||| |||||||| ||  || ||||||  | |||||    
T  18442048 gaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcacgatttggcaccctgcaaaccag-ctcac 18442146  T
Q  259 tgcctc-tccgatcgtgtcacgattgccaaa-tcgcgacacgatttctctgttcttccaaaccacaaatttgaag 331  Q
     || || |   |||||||||||| ||||||| ||| | ||||||||| ||||||||||| |||||||||||||||    
T  18442147 ggcatcatgaaatcgtgtcacga-tgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaag 18442220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 300 - 338
Target Start/End: Original strand, 43625605 - 43625643
Alignment:
Q  300 tttctctgttcttccaaaccacaaatttgaagccaatat 338  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  43625605 tttctctgttcttccagaccacaaatttgaagccaatat 43625643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 295 - 331
Target Start/End: Original strand, 35388197 - 35388233
Alignment:
Q  295 cacgatttctctgttcttccaaaccacaaatttgaag 331  Q
    ||||||||||||||||||||| |||||||||||||||    
T  35388197 cacgatttctctgttcttccagaccacaaatttgaag 35388233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 159 - 235
Target Start/End: Original strand, 38219845 - 38219921
Alignment:
Q  159 gaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattt 235  Q
    |||||||||||||||  || | ||||| |||||||||   ||||||| ||| |||||||||||||||| ||||||||    
T  38219845 gaccagtccttatcatggaaacttaacaagcaagtttgaaaatcgtgtcacaatttcccaagatcgtgtcacgattt 38219921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 269 - 344
Target Start/End: Complemental strand, 26170432 - 26170357
Alignment:
Q  269 atcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaatattcaaca 344  Q
    |||||||||||||  | || ||| | ||||||||| ||||||||||| |||| |||||||||||||| | ||||||    
T  26170432 atcgtgtcacgataccaaattcgtgtcacgatttccctgttcttccataccataaatttgaagccaaaactcaaca 26170357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 269 - 331
Target Start/End: Complemental strand, 29720040 - 29719978
Alignment:
Q  269 atcgtgtcacgattgccaaat-cgcgacacgatttctctgttcttccaaaccacaaatttgaag 331  Q
    ||||||||||||| ||||||| || | ||||||||| ||||||||||| |||||||||||||||    
T  29720040 atcgtgtcacgat-gccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaag 29719978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 269 - 331
Target Start/End: Complemental strand, 29722227 - 29722165
Alignment:
Q  269 atcgtgtcacgattgccaaat-cgcgacacgatttctctgttcttccaaaccacaaatttgaag 331  Q
    ||||||||||||| ||||||| || | ||||||||| ||||||||||| |||||||||||||||    
T  29722227 atcgtgtcacgat-gccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaag 29722165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 269 - 331
Target Start/End: Original strand, 29752315 - 29752377
Alignment:
Q  269 atcgtgtcacgattgccaaa-tcgcgacacgatttctctgttcttccaaaccacaaatttgaag 331  Q
    |||||||||||| ||||||| ||| | ||||||||| ||||||||||| |||||||||||||||    
T  29752315 atcgtgtcacga-tgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaag 29752377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 37556331 - 37556366
Alignment:
Q  1 cgtgacacgatctggggaaatcatggcacgatttct 36  Q
    ||||||||||||| ||||||||||||||||||||||    
T  37556331 cgtgacacgatctagggaaatcatggcacgatttct 37556366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 269 - 307
Target Start/End: Complemental strand, 25412434 - 25412396
Alignment:
Q  269 atcgtgtcacgattgccaaatcgcgacacgatttctctg 307  Q
    ||||||||||||||||||||||| | |||||||||||||    
T  25412434 atcgtgtcacgattgccaaatcgtgtcacgatttctctg 25412396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 286 - 346
Target Start/End: Complemental strand, 31004703 - 31004643
Alignment:
Q  286 aaatcgcgacacgatttc-tctgttcttccaaaccacaaatttgaagccaatattcaacagt 346  Q
    |||||| ||||||||||| |||||||| ||||| ||||||||||||| ||| ||||||||||    
T  31004703 aaatcgtgacacgatttcatctgttctcccaaaacacaaatttgaagacaa-attcaacagt 31004643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 158 - 214
Target Start/End: Original strand, 29751559 - 29751615
Alignment:
Q  158 tgaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgattt 214  Q
    ||||||||||||||||  |||| ||||| ||||||||||  ||||||| ||||||||    
T  29751559 tgaccagtccttatcaaggatacttaacgagcaagtttcacaatcgtgtcacgattt 29751615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 295 - 331
Target Start/End: Original strand, 29751675 - 29751711
Alignment:
Q  295 cacgatttctctgttcttccaaaccacaaatttgaag 331  Q
    ||||||||| ||||||||||| |||||||||||||||    
T  29751675 cacgatttccctgttcttccagaccacaaatttgaag 29751711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 240; Significance: 1e-133; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 34 - 344
Target Start/End: Complemental strand, 43988259 - 43987948
Alignment:
Q  34 tctcaaggttgtcttgaggttctctccaaaaa-tgcacaagaacactttaaatactagtcctgccctgaagaattcgagccacgatttccctagatcgtg 132  Q
    ||||||||||||||| ||||| |||||||||| ||||||||| |||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  43988259 tctcaaggttgtcttaaggttatctccaaaaaatgcacaagagcactttaaatactagtcctgccctgaagaaatcgtgccacgatttccctagatcgtg 43988160  T
Q  133 tcacgatgtgcaacgctccccaagttgaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacga 232  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| ||||||||||| |||||    
T  43988159 tcacgatatgcaacggtccccaagttgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttaccaagatcgtggcacga 43988060  T
Q  233 ttttgcttccagcaaacttggctcactgcctctccgatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagc 332  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||| ||||||||||||||||||||    
T  43988059 ttttgcttccagcaaacttggctcactgcctctctgatcgtgtcacgattgccaaatcgcgacacgattcctctgctctcccaaaccacaaatttgaagc 43987960  T
Q  333 caatattcaaca 344  Q
    |||| |||||||    
T  43987959 caattttcaaca 43987948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 180; E-Value: 5e-97
Query Start/End: Original strand, 45 - 336
Target Start/End: Complemental strand, 25439696 - 25439406
Alignment:
Q  45 tcttgaggttctctccaaaaatgcacaagaacactttaaatactagtcctgccctgaagaattcgagccacgatttccctagatcgtgtcacgatgtgca 144  Q
    |||| ||||| ||| |||||| ||||||||||||  |||||||||||||| |||||||||| ||| ||||||||||||||||||||||||||||| ||||    
T  25439696 tcttaaggttgtcttcaaaaa-gcacaagaacacaataaatactagtcctcccctgaagaaatcgtgccacgatttccctagatcgtgtcacgatctgca 25439598  T
Q  145 acgctccccaagttgaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccag 244  Q
    ||  |||||| |||||||||||||||||||||||| |||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| ||| |    
T  25439597 acagtccccaggttgaccagtccttatcagagatacttaaccagcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcatcctg 25439498  T
Q  245 caaacttggctcactgcctctccgatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaat 336  Q
    |||||||||||||| || ||||  |||||||||||||| |||||||| | ||||||| ||||||||||||| ||||||||||||||||||||    
T  25439497 caaacttggctcacggcatctcaaatcgtgtcacgattaccaaatcgtgtcacgattgctctgttcttccagaccacaaatttgaagccaat 25439406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 62 - 336
Target Start/End: Complemental strand, 44023658 - 44023384
Alignment:
Q  62 aaaatgcacaagaacactttaaatactagtcctgccctgaagaattcgagccacgatttccctagatcgtgtcacgatgtgcaacgctccccaagttgac 161  Q
    |||| ||||||||||||  || |||| |||||| |||||||||| ||| ||||||||||||||||||||||||||||| ||||||| |||||| ||||||    
T  44023658 aaaaagcacaagaacacaatatataccagtcctcccctgaagaaatcgtgccacgatttccctagatcgtgtcacgatctgcaacggtccccaggttgac 44023559  T
Q  162 cagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcactgc 261  Q
    ||||||||||||| |||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||| ||    
T  44023558 cagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcatccagcaaacttggctcacggc 44023459  T
Q  262 ctctccgatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaat 336  Q
      |||| |||||||||||||| | |||||| | ||||||||||||||||||||| ||||||||||||||||||||    
T  44023458 acctccaatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 44023384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 45 - 336
Target Start/End: Complemental strand, 25444889 - 25444599
Alignment:
Q  45 tcttgaggttctctccaaaaatgcacaagaacactttaaatactagtcctgccctgaagaattcgagccacgatttccctagatcgtgtcacgatgtgca 144  Q
    |||| ||||| ||| |||||| ||||||||||||  |||||||||||||| |||||||||| ||| ||||||||||||||||||||||||||||| ||||    
T  25444889 tcttaaggttgtcttcaaaaa-gcacaagaacacaataaatactagtcctcccctgaagaaatcgtgccacgatttccctagatcgtgtcacgatctgca 25444791  T
Q  145 acgctccccaagttgaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccag 244  Q
    ||| |||| | |||||||||||||||||||||||| ||||||| |||||||||| |||||| |||||||||||||||||||||||||||||||| |||      
T  25444790 acggtccctaggttgaccagtccttatcagagatacttaaccaacaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcatccta 25444691  T
Q  245 caaacttggctcactgcctctccgatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaat 336  Q
    |||||||||||||| || ||||  |||||||||||||| |||||||| | ||||||| ||||||||||||| ||||||||||||||||||||    
T  25444690 caaacttggctcacggcatctcaaatcgtgtcacgattaccaaatcgtgtcacgattgctctgttcttccagaccacaaatttgaagccaat 25444599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 45 - 336
Target Start/End: Original strand, 39445784 - 39446075
Alignment:
Q  45 tcttgaggttctctccaaaaatgcacaagaacactttaaatactagtcctgccctgaagaattcgagccacgatttccctagatcgtgtcacgatgtgca 144  Q
    |||| ||||| ||| |||||| ||||||||||||  || |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| ||||    
T  39445784 tcttaaggttgtcttcaaaaaagcacaagaacacaatatatactagtcctgccctgaagaaatcgtgccacgatttccctagatcgtgtcacgatctgca 39445883  T
Q  145 acgctccccaagttgaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccag 244  Q
    ||| |||||| ||||||||||||||||||| |||| ||||| |||||||||||| |||||| || |||||||||||||||||||||||||| || ||| |    
T  39445884 acggtccccaggttgaccagtccttatcagtgatacttaacgagcaagtttctggatcgtgtcatgatttcccaagatcgtgccacgatttggcgtcctg 39445983  T
Q  245 caaacttggctcactgcctctccgatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaat 336  Q
    |||||||||||||| || ||||  |||||||||||||| | |||||| | ||||||||||||||||||||| ||||||||||||||||||||    
T  39445984 caaacttggctcacggcatctcaaatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 39446075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 168; E-Value: 7e-90
Query Start/End: Original strand, 45 - 336
Target Start/End: Complemental strand, 1054812 - 1054521
Alignment:
Q  45 tcttgaggttctctccaaaaatgcacaagaacactttaaatactagtcctgccctgaagaattcgagccacgatttccctagatcgtgtcacgatgtgca 144  Q
    |||| ||||| ||| |||||| ||||||||||||  || ||||||||||| |||||||||| ||| | ||||||||||||||||||||||||||| ||||    
T  1054812 tcttaaggttgtcttcaaaaaagcacaagaacacaatatatactagtcctcccctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgca 1054713  T
Q  145 acgctccccaagttgaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccag 244  Q
    ||| | |||| ||||||||||||||||||| |||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| || ||| |    
T  1054712 acggttcccaggttgaccagtccttatcagtgatacttaactagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctg 1054613  T
Q  245 caaacttggctcactgcctctccgatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaat 336  Q
    |||||||||||||| ||  |||| ||||| |||||||| | |||||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  1054612 caaacttggctcacggcacctccaatcgtatcacgattccaaaatcgtgacacgatttctctgttcttccagaccacaaatttgaagccaat 1054521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 60 - 335
Target Start/End: Original strand, 41390903 - 41391177
Alignment:
Q  60 caaaaatgcacaagaacactttaaatactagtcctgccctgaagaattcgagccacgatttccctagatcgtgtcacgatgtgcaacgctccccaagttg 159  Q
    |||||| ||||||||||||  || ||||||||| | |||||||||| ||| ||||||||||||||||||||||||||||| |||| ||  ||||| ||||    
T  41390903 caaaaaagcacaagaacacaatatatactagtcttcccctgaagaaatcgtgccacgatttccctagatcgtgtcacgatctgcagcggaccccaggttg 41391002  T
Q  160 accagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcact 259  Q
    ||||||||||||||| |||| ||||  |||||||||||||||| || ||||||||||||||||||||||||||||| || ||| |||||| ||||||||     
T  41391003 accagtccttatcagtgatacttaatgagcaagtttctgaatcatgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaac-tggctcacg 41391101  T
Q  260 gcctctccgatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaa 335  Q
    || ||||  |||||||||||||| | |||||| | ||||||||||||||||||||| |||||||||||||||||||    
T  41391102 gcatctcaaatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 41391177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 60 - 282
Target Start/End: Original strand, 41398558 - 41398779
Alignment:
Q  60 caaaaatgcacaagaacactttaaatactagtcctgccctgaagaattcgagccacgatttccctagatcgtgtcacgatgtgcaacgctccccaagttg 159  Q
    |||||| ||||||||||||  || ||||||||| | |||||||||| ||| ||||||||||||||||||||||||||||| |||| ||  ||||| ||||    
T  41398558 caaaaaagcacaagaacacaatatatactagtcttcccctgaagaaatcgtgccacgatttccctagatcgtgtcacgatctgcagcggaccccaggttg 41398657  T
Q  160 accagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcact 259  Q
    ||||||||||||||  |||| ||||  ||||||||||||||||||| ||||||||||||||||||||||||||||| || ||| |||||| ||||||||     
T  41398658 accagtccttatcaatgatacttaatgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaac-tggctcacg 41398756  T
Q  260 gcctctccgatcgtgtcacgatt 282  Q
    || ||||  ||||||||||||||    
T  41398757 gcatctcaaatcgtgtcacgatt 41398779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 60 - 250
Target Start/End: Complemental strand, 24787107 - 24786918
Alignment:
Q  60 caaaaatgcacaagaacactttaaatactagtcctgccctgaagaattcgagccacgatttccctagatcgtgtcacgatgtgcaacgctccccaagtt- 158  Q
    |||||| ||||||||||||  || ||||||||| | | |||||| | ||| ||||||||||||  ||||||||||||||| |||  |   ||| | |||     
T  24787107 caaaaaagcacaagaacacaatatatactagtcttcctctgaagcaatcgtgccacgatttcc--agatcgtgtcacgatttgcgtctgacccaaggttt 24787010  T
Q  159 gaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaact 250  Q
    |||||||||||||||  |||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| || ||| |||||||    
T  24787009 gaccagtccttatcaaggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaact 24786918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 68 - 250
Target Start/End: Complemental strand, 24793921 - 24793740
Alignment:
Q  68 cacaagaacactttaaatactagtcctgccctgaagaattcgagccacgatttccctagatcgtgtcacgatgtgcaacgctccccaagtt-gaccagtc 166  Q
    |||||||||||  || ||||||||| | | |||||| | ||| ||||||||||||  ||||||||||||||| |||  |   ||| | ||| ||||||||    
T  24793921 cacaagaacacaatatatactagtcttcctctgaagcaatcgtgccacgatttcc--agatcgtgtcacgatttgcgtctgacccaaggtttgaccagtc 24793824  T
Q  167 cttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaact 250  Q
    |||||||  |||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| || ||| |||||||    
T  24793823 cttatcaaggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaact 24793740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 159 - 336
Target Start/End: Complemental strand, 44203402 - 44203225
Alignment:
Q  159 gaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcac 258  Q
    |||||||||||||||  |||| ||||| |||||||||||| |||||| |||||||| || | |||||||||||||||     || |||| | | ||||||    
T  44203402 gaccagtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgattttcccaaatcgtgccacgatttgcacccctgcaaccctagctcac 44203303  T
Q  259 tgcctctccgatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaat 336  Q
     ||  |||| |||||||||||||| | |||||| | ||||||||| ||||||||||| ||||||||||||||| ||||    
T  44203302 ggcacctccaatcgtgtcacgattccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat 44203225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 338 - 413
Target Start/End: Complemental strand, 30367821 - 30367746
Alignment:
Q  338 ttcaacagtgcttttacaaagttgaaataacattcatccatttcttcacttctgctgcacttgctttgctcttcgc 413  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||| ||||||||    
T  30367821 ttcatcagtgcttttacaaagttgaaataagattcatccatttcttcactgctgctgcacttgcttttctcttcgc 30367746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 286 - 336
Target Start/End: Original strand, 13598967 - 13599017
Alignment:
Q  286 aaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaat 336  Q
    |||||| | ||||||||||||||||||||||||||||||||||||||||||    
T  13598967 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 13599017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 286 - 344
Target Start/End: Original strand, 37070334 - 37070392
Alignment:
Q  286 aaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaatattcaaca 344  Q
    |||||| | |||||||||||||||||||||||||||||||||||| ||||| |||||||    
T  37070334 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaaaccaattttcaaca 37070392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 21536170 - 21536121
Alignment:
Q  286 aaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaa 335  Q
    |||||| | |||||||||||||||||||||||||||||||||||||||||    
T  21536170 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 21536121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 286 - 338
Target Start/End: Complemental strand, 24793723 - 24793671
Alignment:
Q  286 aaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaatat 338  Q
    |||||| | ||||||||||||||||||||| ||||||||||||||||||||||    
T  24793723 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 24793671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 181 - 335
Target Start/End: Complemental strand, 19361075 - 19360921
Alignment:
Q  181 ttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcactgcctctccga-tcgtgtcacg 279  Q
    ||||| |||||||||   ||||||| |||||||||||||||||||| |||||||| ||  || ||||||  | ||||| || || |  | ||||||||||    
T  19361075 ttaacgagcaagtttgaaaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccag-ctcacggcatcacaaaatcgtgtcacg 19360977  T
Q  280 attgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaa 335  Q
    ||  | || ||| | |||||||||||||||||| || |||||||||||||||||||    
T  19360976 ataccaaattcgtgtcacgatttctctgttctttcagaccacaaatttgaagccaa 19360921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 158 - 331
Target Start/End: Original strand, 20622635 - 20622808
Alignment:
Q  158 tgaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctca 257  Q
    ||||||||||||||||  |||| ||||| ||||||||||  ||||||| ||||||||||||  |||||| |||||||| ||  || ||| || | |||||    
T  20622635 tgaccagtccttatcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccacaatcgtgtcacgatttggcaccctgcagac-tagctca 20622733  T
Q  258 ctgcctctc-cgatcgtgtcacgattgccaaa-tcgcgacacgatttctctgttcttccaaaccacaaatttgaag 331  Q
    | ||  | |   |||||||||||| ||||||| ||| | ||||||||| ||||||||||| |||||||||||||||    
T  20622734 cggcaccacgaaatcgtgtcacga-tgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaag 20622808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 269 - 335
Target Start/End: Complemental strand, 24202326 - 24202260
Alignment:
Q  269 atcgtgtcacgattgccaaat-cgcgacacgatttctctgttcttccaaaccacaaatttgaagccaa 335  Q
    ||||||||||||| ||||||| || | ||||||||||||||||||||| |||||||||||||||||||    
T  24202326 atcgtgtcacgat-gccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 24202260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 158 - 335
Target Start/End: Complemental strand, 51765176 - 51764999
Alignment:
Q  158 tgaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctca 257  Q
    ||||||||||||||||  || | ||||| |||||||||   ||||||| ||||||| | |||||||||| |||||||| ||  || ||||||  | ||||    
T  51765176 tgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgattcctcaagatcgtgtcacgatttggcaccctgcaaaccag-ctca 51765078  T
Q  258 ctgcctctccga-tcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaa 335  Q
    | || || |  | ||||||||||||  | || ||| | ||||||||||||||||||||| ||||||||||| |||||||    
T  51765077 cggcatcacgaaatcgtgtcacgatgtcaaattcgtgtcacgatttctctgttcttccagaccacaaatttaaagccaa 51764999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 295 - 331
Target Start/End: Complemental strand, 13604144 - 13604108
Alignment:
Q  295 cacgatttctctgttcttccaaaccacaaatttgaag 331  Q
    |||||||||||||||||||||||||||||||||||||    
T  13604144 cacgatttctctgttcttccaaaccacaaatttgaag 13604108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 181 - 331
Target Start/End: Complemental strand, 19365931 - 19365781
Alignment:
Q  181 ttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcactgcctctccga-tcgtgtcacg 279  Q
    ||||| |||||||||   ||||||| |||||||||||||||||||| |||||||| ||  || ||||||  | ||||| || || |  | ||||||||||    
T  19365931 ttaacgagcaagtttgaaaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccag-ctcacggcatcacaaaatcgtgtcacg 19365833  T
Q  280 attgccaaat-cgcgacacgatttctctgttcttccaaaccacaaatttgaag 331  Q
    || ||||||| || | |||||||||||||||||| || |||||||||||||||    
T  19365832 at-gccaaattcgtgtcacgatttctctgttctttcagaccacaaatttgaag 19365781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 269 - 336
Target Start/End: Complemental strand, 9036077 - 9036010
Alignment:
Q  269 atcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaat 336  Q
    |||||||||||||  | |||||| | ||||||||| ||||||||||| ||||||||||||||| ||||    
T  9036077 atcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat 9036010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 371 - 410
Target Start/End: Original strand, 13007700 - 13007739
Alignment:
Q  371 tcatccatttcttcacttctgctgcacttgctttgctctt 410  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  13007700 tcatccatttcttcactgctgctgcacttgctttgctctt 13007739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 295 - 338
Target Start/End: Original strand, 13659849 - 13659892
Alignment:
Q  295 cacgatttctctgttcttccaaaccacaaatttgaagccaatat 338  Q
    |||||||||||||||  |||||||||||||||||||||||||||    
T  13659849 cacgatttctctgtttctccaaaccacaaatttgaagccaatat 13659892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 286 - 344
Target Start/End: Original strand, 3282273 - 3282331
Alignment:
Q  286 aaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaatattcaaca 344  Q
    |||||| | |||||||| ||||||||||| ||||||||||||||||||||  |||||||    
T  3282273 aaatcgtgtcacgatttttctgttcttcctaaccacaaatttgaagccaaatttcaaca 3282331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 295 - 345
Target Start/End: Complemental strand, 26644422 - 26644372
Alignment:
Q  295 cacgatttctctgttcttccaaaccacaaatttgaagccaatattcaacag 345  Q
    ||||||| ||||||||||||||||||||||||| |||||||| || |||||    
T  26644422 cacgattcctctgttcttccaaaccacaaatttaaagccaatttttaacag 26644372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 295 - 336
Target Start/End: Complemental strand, 16124229 - 16124188
Alignment:
Q  295 cacgatttctctgttcttccaaaccacaaatttgaagccaat 336  Q
    ||||||||||||||||||||||||||||||||| || |||||    
T  16124229 cacgatttctctgttcttccaaaccacaaatttaaaaccaat 16124188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 269 - 336
Target Start/End: Complemental strand, 21053614 - 21053547
Alignment:
Q  269 atcgtgtcacgattgccaaat-cgcgacacgatttctctgttcttccaaaccacaaatttgaagccaat 336  Q
    ||||||||||||| ||||||| || | ||||||||| ||||||||||| ||||||||||||||| ||||    
T  21053614 atcgtgtcacgat-gccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat 21053547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 295 - 335
Target Start/End: Original strand, 41398773 - 41398813
Alignment:
Q  295 cacgatttctctgttcttccaaaccacaaatttgaagccaa 335  Q
    |||||||||||||||||| || |||||||||||||||||||    
T  41398773 cacgatttctctgttctttcagaccacaaatttgaagccaa 41398813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 371 - 410
Target Start/End: Original strand, 13214319 - 13214358
Alignment:
Q  371 tcatccatttcttcacttctgctgcacttgctttgctctt 410  Q
    |||||||| |||||||| ||||||||||||||||||||||    
T  13214319 tcatccatctcttcactgctgctgcacttgctttgctctt 13214358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 371 - 410
Target Start/End: Original strand, 19727653 - 19727692
Alignment:
Q  371 tcatccatttcttcacttctgctgcacttgctttgctctt 410  Q
    |||||||| |||||||| ||||||||||||||||||||||    
T  19727653 tcatccatctcttcactgctgctgcacttgctttgctctt 19727692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 235
Target Start/End: Complemental strand, 9987063 - 9986894
Alignment:
Q  66 tgcacaagaacactttaaatactagtcctgccctgaagaattcgagccacgatttccctagatcgtgtcacgat--gtgcaacgctccccaagt-tgacc 162  Q
    ||||||||||||||| ||||||||| ||| | ||||  || | | | ||||||||||  |||||||||||||||  ||||| |  |||| | || |||||    
T  9987063 tgcacaagaacactt-aaatactagccctccactgataaaattgtgtcacgatttcc--agatcgtgtcacgattggtgcatccgtcccaaggtatgacc 9986967  T
Q  163 agtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattt 235  Q
    ||||||||| |  || | ||||| |||||||||   ||||||| ||||||||||||| |||||| ||||||||    
T  9986966 agtccttattatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccaaaatcgtgtcacgattt 9986894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 295 - 331
Target Start/End: Complemental strand, 9986834 - 9986798
Alignment:
Q  295 cacgatttctctgttcttccaaaccacaaatttgaag 331  Q
    ||||||||| ||||||||||| |||||||||||||||    
T  9986834 cacgatttccctgttcttccagaccacaaatttgaag 9986798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 362 - 410
Target Start/End: Original strand, 13005479 - 13005527
Alignment:
Q  362 aaataacattcatccatttcttcacttctgctgcacttgctttgctctt 410  Q
    |||||||||||| | ||||||||||| |||||||||||| || ||||||    
T  13005479 aaataacattcaacaatttcttcactgctgctgcacttgtttagctctt 13005527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 295 - 323
Target Start/End: Original strand, 29652390 - 29652418
Alignment:
Q  295 cacgatttctctgttcttccaaaccacaa 323  Q
    |||||||||||||||||||||||||||||    
T  29652390 cacgatttctctgttcttccaaaccacaa 29652418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 236; Significance: 1e-130; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 45 - 344
Target Start/End: Original strand, 35745680 - 35745979
Alignment:
Q  45 tcttgaggttctctccaaaaatgcacaagaacactttaaatactagtcctgccctgaagaattcgagccacgatttccctagatcgtgtcacgatgtgca 144  Q
    |||| ||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| ||||    
T  35745680 tcttaaggttatctccaaaaaagcacaagaacactttaaatactagtcctgccctgaagaaatcgtgccacgatttccctagatcgtgtcacgatctgca 35745779  T
Q  145 acgctccccaagttgaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccag 244  Q
    ||| |||||| |||||||||||||||||| ||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||     
T  35745780 acggtccccaggttgaccagtccttatcatagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccaa 35745879  T
Q  245 caaacttggctcactgcctctccgatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaatattcaaca 344  Q
    |||||||||||||| || ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  35745880 caaacttggctcacggcatctccgatcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaattttcaaca 35745979  T

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Target: chr8; HSP #2
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 45 - 345
Target Start/End: Complemental strand, 39784623 - 39784324
Alignment:
Q  45 tcttgaggttctctccaaaaatgcacaagaacactttaaatactagtcctgccctgaagaattcgagccacgatttccctagatcgtgtcacgatgtgca 144  Q
    |||| ||||||||| |||||| ||||||||||||  || ||||||||| | |||||||||| ||| ||||||||||||||||||||||||||||| ||||    
T  39784623 tcttaaggttctcttcaaaaaagcacaagaacacaatatatactagtcttcccctgaagaaatcgtgccacgatttccctagatcgtgtcacgatctgca 39784524  T
Q  145 acgctccccaagttgaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccag 244  Q
    ||| |||||| ||||||||||||||||||| |||| ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| |||||    
T  39784523 acggtccccaggttgaccagtccttatcagtgatacttaaccaacaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcatccag 39784424  T
Q  245 caaacttggctcactgcctctccgatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaatattcaaca 344  Q
    |||||||||||||| ||  |||| |||||||||||||| | |||||| | ||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  39784423 caaacttggctcacggcacctccaatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat-ttcaaca 39784325  T

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Target: chr8; HSP #3
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 67 - 338
Target Start/End: Complemental strand, 10684015 - 10683744
Alignment:
Q  67 gcacaagaacactttaaatactagtcctgccctgaagaattcgagccacgatttccctagatcgtgtcacgatgtgcaacgctccccaagttgaccagtc 166  Q
    ||||||||||||||||||||||||||||| ||||| ||| ||| ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||    
T  10684015 gcacaagaacactttaaatactagtcctgtcctgaggaaatcgtgccacgatttccctagatcgtgtcacgatctgcaacggtccccaagttgaccagtc 10683916  T
Q  167 cttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcactgc-ctct 265  Q
    ||||||||||||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| || ||| |||||| | |||||| || |  |    
T  10683915 cttatcagagatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaac-tagctcacggcacctt 10683817  T
Q  266 ccgatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaatat 338  Q
       |||||||||||||  | |||||| | ||||||||||||||||||||| ||||||||||||||||||||||    
T  10683816 gaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 10683744  T

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Target: chr8; HSP #4
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 60 - 338
Target Start/End: Complemental strand, 25327947 - 25327669
Alignment:
Q  60 caaaaatgcacaagaacactttaaatactagtcctgccctgaagaattcgagccacgatttccctagatcgtgtcacgatgtgcaacgctccccaagttg 159  Q
    |||||| ||||||||||||  || ||||||||| | |||||||||| ||| ||||||||||||||||||||||||||||  |||||||  ||| | ||||    
T  25327947 caaaaaagcacaagaacacaatatatactagtcttcccctgaagaaatcgtgccacgatttccctagatcgtgtcacgagctgcaacggacccaaggttg 25327848  T
Q  160 accagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcact 259  Q
    || |||||||||||| |||| ||||| ||||||||||||||||||| ||||||||||||||||||||||| ||||| || ||| |||||| | ||||||     
T  25327847 acaagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccatgatttggcgtcctgcaaac-tagctcaca 25327749  T
Q  260 gcctc-tccgatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaatat 338  Q
    ||| | |   |||||| |||||   | |||||| | ||||||||||||||||||||| ||||||||||||||||||||||    
T  25327748 gccacttgaaatcgtgccacgaagccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 25327669  T

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Target: chr8; HSP #5
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 60 - 337
Target Start/End: Original strand, 6311652 - 6311929
Alignment:
Q  60 caaaaatgcacaagaacactttaaatactagtcctgccctgaagaattcgagccacgatttccctagatcgtgtcacgatgtgcaacgctccccaagttg 159  Q
    |||||| ||||||||||||  || ||||||||| | | |||||||| | | |||||||||||||   ||||||||||||| |||| |   ||| | ||||    
T  6311652 caaaaaagcacaagaacacaatatatactagtcttcctctgaagaaattgtgccacgatttcccacaatcgtgtcacgatttgcatctgacccaaggttg 6311751  T
Q  160 accagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcact 259  Q
    || ||||||||| || |||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| || ||| |||||| | ||||||     
T  6311752 acaagtccttattagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaac-tagctcacg 6311850  T
Q  260 gc-ctctccgatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaata 337  Q
    || |  |   |||||||||||||  | |||||| | || |||||||||||||||||| |||||||||||||||||||||    
T  6311851 gcaccttgaaatcgtgtcacgatgccaaaatcgtgtcatgatttctctgttcttccagaccacaaatttgaagccaata 6311929  T

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Target: chr8; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 158 - 338
Target Start/End: Original strand, 36979829 - 36980009
Alignment:
Q  158 tgaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctca 257  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||||| |||||||| |||||||||||||||||||| || ||| |||||| | |||||    
T  36979829 tgaccagtccttatcagagatacttaacgagcaagtttctgaatcgtgtcacgattttccaagatcgtgccacgatttggcgtcctgcaaac-tagctca 36979927  T
Q  258 ctgcctctc-cgatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaatat 338  Q
    | ||  |||   |||||||||||||  | |||||| | ||||||||||||||||||||| ||||||||||||||||||||||    
T  36979928 cggcacctcgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 36980009  T

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Target: chr8; HSP #7
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 67 - 338
Target Start/End: Complemental strand, 4759809 - 4759539
Alignment:
Q  67 gcacaagaacactttaaatactagtcctgccctgaagaattcgagccacgatttccctagatcgtgtcacgatgtgcaacgctccccaagt-tgaccagt 165  Q
    ||||||||||||  || ||||||||| | | |||||||| ||| | ||||||||||  ||||||||||||||| |||  |  | || | || ||||||||    
T  4759809 gcacaagaacacaatatatactagtcttcctctgaagaaatcgtgtcacgatttcc--agatcgtgtcacgatttgcgtccgttccaaggtatgaccagt 4759712  T
Q  166 ccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcactgcctct 265  Q
    ||||||||  |||| ||||| ||||||||||| ||||||| ||||||||||||||||||||||||||||| || ||| |||||| | |||||| ||  ||    
T  4759711 ccttatcaaggatacttaacgagcaagtttctaaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaac-tagctcacggcacct 4759613  T
Q  266 c-cgatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaatat 338  Q
    |   |||||||||||||  | |||||| | ||||||||||||||||||||| ||||||||||||||||||||||    
T  4759612 cgaaatcgtgtcacgatgtcaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 4759539  T

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Target: chr8; HSP #8
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 60 - 338
Target Start/End: Complemental strand, 18852909 - 18852632
Alignment:
Q  60 caaaaatgcacaagaacactttaaatactagtcctgccctgaagaattcgagccacgatttccctagatcgtgtcacgatgtgcaacgctccccaagt-t 158  Q
    |||||| ||||||||||||  || ||||||||| | | |||||| | ||| ||||||||||||  | ||||||||||||| |||  |   ||| | || |    
T  18852909 caaaaaagcacaagaacacaatatatactagtcttcctctgaagcaatcgtgccacgatttcc--aaatcgtgtcacgatctgcgtctgacccaaggtat 18852812  T
Q  159 gaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcac 258  Q
    |||||||||||||||| |||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| || ||| |||||| | ||||||    
T  18852811 gaccagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaac-tagctcac 18852713  T
Q  259 tgc-ctctccgatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaatat 338  Q
     || |  |   |||||||||||||  | ||||||   ||||||||||||||||||||| ||||||||||||||||||||||    
T  18852712 ggcaccttgaaatcgtgtcacgatgccaaaatcgtatcacgatttctctgttcttccagaccacaaatttgaagccaatat 18852632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 68 - 338
Target Start/End: Original strand, 30656008 - 30656277
Alignment:
Q  68 cacaagaacactttaaatactagtcctgccctgaagaattcgagccacgatttccctagatcgtgtcacgatgtgcaacgctccccaagtt-gaccagtc 166  Q
    |||||||||||  || ||||||||| | | |||||| | ||| ||||||||||||  ||||||||||||||| |||  |   ||| | ||| ||||||||    
T  30656008 cacaagaacacaatatatactagtcttcctctgaagcaatcgtgccacgatttcc--agatcgtgtcacgatttgcgtctgacccaaggtttgaccagtc 30656105  T
Q  167 cttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcactgc-ctct 265  Q
    |||||||  |||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| || ||| |||||| | |||||| || |  |    
T  30656106 cttatcaaggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaac-tagctcacggcacctt 30656204  T
Q  266 ccgatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaatat 338  Q
       |||||||||||||  | |||||| | ||||||||||||||||||||| ||||||||||||||||||||||    
T  30656205 gaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 30656277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 60 - 338
Target Start/End: Complemental strand, 7289711 - 7289432
Alignment:
Q  60 caaaaatgcacaagaacactttaaatactagtcctgccctgaagaattcgagccacgatttccctagatcgtgtcacgatgtgcaacgctccccaagttg 159  Q
    |||||| ||||||||||||  || ||||||||| | | |||||||| ||| ||||||||||||| ||||||||||||||| |||| |    || | || |    
T  7289711 caaaaaagcacaagaacacaatatatactagtcttcctctgaagaaatcgtgccacgatttcccaagatcgtgtcacgatttgcatctgatccaaggtag 7289612  T
Q  160 accagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctca-- 257  Q
    || |||||||||||| |||| ||||| ||||||||||||||||||| |||||||| ||||||||||| |||||||| || ||| |||||| | |||||      
T  7289611 acaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgattttccaagatcgtgtcacgatttggcgtcctgcaaac-tagctcatg 7289513  T
Q  258 -ctgcctctccgatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaatat 338  Q
     || ||| |   |||||||||||||  | |||||| | ||| ||||||||||||||||| ||||||||||||||| ||||||    
T  7289512 gctccct-tgaaatcgtgtcacgatgccaaaatcgtgtcactatttctctgttcttccagaccacaaatttgaagtcaatat 7289432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 158 - 338
Target Start/End: Complemental strand, 18870206 - 18870026
Alignment:
Q  158 tgaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctca 257  Q
    |||||||||||||| || |||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| || ||| |||||| | |||||    
T  18870206 tgaccagtccttattagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaac-tagctca 18870108  T
Q  258 ctgcctc-tccgatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaatat 338  Q
    |  | || |   |||||||||||||  | |||||| | ||||||||||||||||||||| ||||||||||||||||||||||    
T  18870107 cgacatcttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 18870026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 158 - 338
Target Start/End: Complemental strand, 33037472 - 33037292
Alignment:
Q  158 tgaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctca 257  Q
    ||||||||||||||||| |||| ||||  ||||||||||||||||||| |||||||||||||||||||| |||||||| || ||| |||||| | |||||    
T  33037472 tgaccagtccttatcagtgatacttaatgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgtcacgatttggcgtcctgcaaac-tagctca 33037374  T
Q  258 ctgcctctc-cgatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaatat 338  Q
    | ||  |||   |||||||||||||  | |||||| | ||||||||||||||||||||| ||||||||||||||||||||||    
T  33037373 cggcacctcgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 33037292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 60 - 250
Target Start/End: Complemental strand, 10688882 - 10688692
Alignment:
Q  60 caaaaatgcacaagaacactttaaatactagtcctgccctgaagaattcgagccacgatttccctagatcgtgtcacgatgtgcaacgctccccaagttg 159  Q
    ||||| |||||||||||||  || ||||||||| | | |||||||| | | |||||||||||||   ||||||||||||| |||| |   ||| | ||||    
T  10688882 caaaactgcacaagaacacaatatatactagtcttcctctgaagaaattgtgccacgatttcccacaatcgtgtcacgatttgcatctgacccaaggttg 10688783  T
Q  160 accagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaact 250  Q
    || ||||||||| || |||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| || ||| |||||||    
T  10688782 acaagtccttattagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaact 10688692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 60 - 335
Target Start/End: Complemental strand, 1261699 - 1261423
Alignment:
Q  60 caaaaatgcacaagaacactttaaatactagtcctgccctgaagaattcgagccacgatttccctagatcgtgtcacgatgtgcaacgc---tccccaag 156  Q
    |||||| |||||||||||||||||||||||| | | | ||||  || ||| | ||||||||||  ||||||||||||||| || ||||    |||| | |    
T  1261699 caaaaaagcacaagaacactttaaatactagccttcctctgataaaatcgtgtcacgatttcc--agatcgtgtcacgatttg-aacgtatgtcccaagg 1261603  T
Q  157 t-tgaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggct 255  Q
    | ||||||||||||||||  |||| ||||| |||||||||   ||||||| |||||||||||||||||||| |||||||| ||  || |||||| | |||    
T  1261602 tatgaccagtccttatcaaggatacttaacgagcaagtttgaaaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaac-tagct 1261504  T
Q  256 cactgcctctc-cgatcgtgtcacgattgccaaa-tcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaa 335  Q
    ||| || || |   |||||||||||| ||||||| ||| | | |||||||| ||||||||||||||||||||||||| ||||    
T  1261503 cacggcatcacgaaatcgtgtcacga-tgccaaattcgtgtcgcgatttctgtgttcttccaaaccacaaatttgaaaccaa 1261423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 159 - 336
Target Start/End: Complemental strand, 3439271 - 3439095
Alignment:
Q  159 gaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcac 258  Q
    |||||||||||||||  |||| ||||| ||||||||||   |||||| ||||||||||||| |||||| |||||||||||  || |||| || | |||||    
T  3439271 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaacctag-ctcac 3439174  T
Q  259 tgcctctccga--tcgtgtcacgattgcca-aatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaat 336  Q
     ||  | ||||  |||||||||||| |||| ||||| | ||||||||||||||||||||||||||||||||||||| ||||    
T  3439173 ggcacc-ccgaaatcgtgtcacgat-gccacaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagacaat 3439095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 269 - 346
Target Start/End: Original strand, 7412877 - 7412954
Alignment:
Q  269 atcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaatattcaacagt 346  Q
    |||||||||||||  | |||||| | ||||||||||||||||||||||||||||||||||||| |||  |||||||||    
T  7412877 atcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagtcaaatttcaacagt 7412954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 286 - 336
Target Start/End: Complemental strand, 5702009 - 5701959
Alignment:
Q  286 aaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaat 336  Q
    |||||| | ||||||||||||||||||||||||||||||||||||||||||    
T  5702009 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 5701959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 286 - 338
Target Start/End: Complemental strand, 10688675 - 10688623
Alignment:
Q  286 aaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaatat 338  Q
    |||||| | ||||||||||||||||||||| ||||||||||||||||||||||    
T  10688675 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 10688623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 286 - 344
Target Start/End: Original strand, 4456575 - 4456633
Alignment:
Q  286 aaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaatattcaaca 344  Q
    |||||| | |||||||||| |||||||||||||||||||||||||||||| || |||||    
T  4456575 aaatcgtgtcacgatttctttgttcttccaaaccacaaatttgaagccaaaatacaaca 4456633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 159 - 336
Target Start/End: Original strand, 42575724 - 42575902
Alignment:
Q  159 gaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgattt-cccaagatcgtgccacgattttgcttccagcaaacttggctca 257  Q
    |||||||||||||||  |||| ||||| |||||||||||  |||||| |||||||| ||||| |||||| ||||||||     || |||| | |  ||||    
T  42575724 gaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgacacgatttgcacccctgcaaccctaactca 42575823  T
Q  258 ctgcctctccgatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaat 336  Q
    | || ||    |||||||| ||||  | |||||| | ||||||||| ||||||||||||||||||||||||||| ||||    
T  42575824 cggcatccgaaatcgtgtcgcgatcccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaat 42575902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 19175282 - 19175233
Alignment:
Q  286 aaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaa 335  Q
    |||||| |||||||||| |||||||||||||||| |||||||||||||||    
T  19175282 aaatcgtgacacgatttttctgttcttccaaaccgcaaatttgaagccaa 19175233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 269 - 335
Target Start/End: Complemental strand, 2627393 - 2627327
Alignment:
Q  269 atcgtgtcacgattgccaaat-cgcgacacgatttctctgttcttccaaaccacaaatttgaagccaa 335  Q
    ||||||||||||| ||||||| || | ||||||||| ||||||||||| |||||||||||||||||||    
T  2627393 atcgtgtcacgat-gccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaa 2627327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 159 - 238
Target Start/End: Complemental strand, 25689725 - 25689646
Alignment:
Q  159 gaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgc 238  Q
    |||||||||||||||  |||| ||||| ||||||||||   ||||||  |||||||||||  ||||||||||||||||||    
T  25689725 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtgacgatttcccacaatcgtgccacgattttgc 25689646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 286 - 336
Target Start/End: Complemental strand, 15290200 - 15290150
Alignment:
Q  286 aaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaat 336  Q
    |||||| | ||||||||| ||||||||||||||||||||||||||| ||||    
T  15290200 aaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaat 15290150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 286 - 336
Target Start/End: Complemental strand, 15470569 - 15470519
Alignment:
Q  286 aaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaat 336  Q
    |||||| | ||||||||| ||||||||||||||||||||||||||| ||||    
T  15470569 aaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaat 15470519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 286 - 336
Target Start/End: Complemental strand, 25689618 - 25689568
Alignment:
Q  286 aaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaat 336  Q
    |||||| | ||||||||||||||||||||| ||||||||||||||| ||||    
T  25689618 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagacaat 25689568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 159 - 331
Target Start/End: Original strand, 26288332 - 26288504
Alignment:
Q  159 gaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcac 258  Q
    |||||||||||||||  || | ||||| |||||||||   ||| ||| |||||||||||||||| ||| |||||||| ||  || ||||||  | |||||    
T  26288332 gaccagtccttatcatggaaacttaacgagcaagtttgaaaattgtgtcacgatttcccaagattgtgtcacgatttggcaccctgcaaaccag-ctcac 26288430  T
Q  259 tgcctctccga-tcgtgtcacgattgccaaat-cgcgacacgatttctctgttcttccaaaccacaaatttgaag 331  Q
     || || |  | || ||||||||| ||||||| || | ||||||||||||||||||||| |||||||||||||||    
T  26288431 ggcatcacaaaatcatgtcacgat-gccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaag 26288504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 159 - 331
Target Start/End: Original strand, 26301589 - 26301761
Alignment:
Q  159 gaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcac 258  Q
    |||||||||||||||  || | ||||| |||||||||   ||| ||| |||||||||||||||| ||| |||||||| ||  || ||||||  | |||||    
T  26301589 gaccagtccttatcatggaaacttaacgagcaagtttgaaaattgtgtcacgatttcccaagattgtgtcacgatttggcaccctgcaaaccag-ctcac 26301687  T
Q  259 tgcctctccga-tcgtgtcacgattgccaaat-cgcgacacgatttctctgttcttccaaaccacaaatttgaag 331  Q
     || || |  | || ||||||||| ||||||| || | ||||||||||||||||||||| |||||||||||||||    
T  26301688 ggcatcacaaaatcatgtcacgat-gccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaag 26301761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 159 - 331
Target Start/End: Original strand, 26313583 - 26313755
Alignment:
Q  159 gaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcac 258  Q
    |||||||||||||||  || | ||||| |||||||||   ||| ||| |||||||||||||||| ||| |||||||| ||  || ||||||  | |||||    
T  26313583 gaccagtccttatcatggaaacttaacgagcaagtttgaaaattgtgtcacgatttcccaagattgtgtcacgatttggcaccctgcaaaccag-ctcac 26313681  T
Q  259 tgcctctccga-tcgtgtcacgattgccaaat-cgcgacacgatttctctgttcttccaaaccacaaatttgaag 331  Q
     || || |  | || ||||||||| ||||||| || | ||||||||||||||||||||| |||||||||||||||    
T  26313682 ggcatcacaaaatcatgtcacgat-gccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaag 26313755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 235
Target Start/End: Complemental strand, 15290327 - 15290251
Alignment:
Q  160 accagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacga-tttcccaagatcgtgccacgattt 235  Q
    ||||||||||||||  |||| ||||| |||||||||||  |||||| ||||| |||||||| |||||| ||||||||    
T  15290327 accagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacgattt 15290251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 235
Target Start/End: Complemental strand, 15470696 - 15470620
Alignment:
Q  160 accagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacga-tttcccaagatcgtgccacgattt 235  Q
    ||||||||||||||  |||| ||||| |||||||||||  |||||| ||||| |||||||| |||||| ||||||||    
T  15470696 accagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacgattt 15470620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 296 - 336
Target Start/End: Complemental strand, 23799139 - 23799099
Alignment:
Q  296 acgatttctctgttcttccaaaccacaaatttgaagccaat 336  Q
    ||||||||||||||||| ||||||||||||||||| |||||    
T  23799139 acgatttctctgttctttcaaaccacaaatttgaaaccaat 23799099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 269 - 331
Target Start/End: Complemental strand, 31042983 - 31042921
Alignment:
Q  269 atcgtgtcacgattgccaaat-cgcgacacgatttctctgttcttccaaaccacaaatttgaag 331  Q
    ||||||||||||| ||||||| || | |||||||||||| |||||||| |||||||||||||||    
T  31042983 atcgtgtcacgat-gccaaattcgtgtcacgatttctctattcttccagaccacaaatttgaag 31042921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 159 - 235
Target Start/End: Complemental strand, 2627503 - 2627427
Alignment:
Q  159 gaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattt 235  Q
    ||||| |||||||||  || | ||||| |||||||||   ||||||| ||||||||||||| |||||| ||||||||    
T  2627503 gaccaatccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccaaaatcgtgtcacgattt 2627427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 232; Significance: 1e-128; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 45 - 344
Target Start/End: Original strand, 19344711 - 19345010
Alignment:
Q  45 tcttgaggttctctccaaaaatgcacaagaacactttaaatactagtcctgccctgaagaattcgagccacgatttccctagatcgtgtcacgatgtgca 144  Q
    |||| ||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| ||| ||||    
T  19344711 tcttaaggttatctccaaaaaagcacaagaacactttaaatactagtcctgccctgaagaaatcgtgccacgatttccctagatcgtgtcatgatctgca 19344810  T
Q  145 acgctccccaagttgaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccag 244  Q
    ||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  19344811 acggtccccaggttgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccatgattttgcttccag 19344910  T
Q  245 caaacttggctcactgcctctccgatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaatattcaaca 344  Q
    |||||||||||||| || ||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  19344911 caaacttggctcacggcatctccgatcgtatcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaattttcaaca 19345010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 45 - 346
Target Start/End: Original strand, 19349569 - 19349870
Alignment:
Q  45 tcttgaggttctctccaaaaatgcacaagaacactttaaatactagtcctgccctgaagaattcgagccacgatttccctagatcgtgtcacgatgtgca 144  Q
    |||| ||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| ||||    
T  19349569 tcttaaggttatctccaaaaaagcacaagaacactttaaatactagtcctgccctgaagaaatcgtgccacgatttccctagatcgtgtcacgatctgca 19349668  T
Q  145 acgctccccaagttgaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccag 244  Q
    ||| ||| || |||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  19349669 acggtcctcaggttgaccagtccttatcagagatacttaaccaacaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccag 19349768  T
Q  245 caaacttggctcactgcctctccgatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaatattcaaca 344  Q
    |||||||||||||| || ||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| ||||| |||||||    
T  19349769 caaacttggctcacggcatctccgatcgtgtcacgattgccaaattgcgacacgattcctctgttcttccaaaccacaaatttgaaaccaattttcaaca 19349868  T
Q  345 gt 346  Q
    ||    
T  19349869 gt 19349870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 60 - 338
Target Start/End: Complemental strand, 39811760 - 39811482
Alignment:
Q  60 caaaaatgcacaagaacactttaaatactagtcctgccctgaagaattcgagccacgatttccctagatcgtgtcacgatgtgcaacgctccccaagttg 159  Q
    |||||| ||||||||||||  || ||||||||| | | |||||||| ||| ||||||||||||||||||||||||||||| |||||||  ||| | |  |    
T  39811760 caaaaaagcacaagaacacaatatatactagtcttcctctgaagaaatcgtgccacgatttccctagatcgtgtcacgatctgcaacggccccaaggcag 39811661  T
Q  160 accagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcact 259  Q
    || |||||||||||| |||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || ||| |||||||| ||| ||     
T  39811660 acaagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactt-gcttacg 39811562  T
Q  260 gcctc-tccgatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaatat 338  Q
    | | | |   |||||||||||||  | |||||| | ||||||||||||||||||||| ||||||||||||||||||||||    
T  39811561 gtcacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 39811482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 61 - 338
Target Start/End: Original strand, 32247091 - 32247347
Alignment:
Q  61 aaaaatgcacaagaacactttaaatactagtcctgccctgaagaattcgagccacgatttccctagatcgtgtcacgatgtgcaacgctccccaagttga 160  Q
    ||||| ||||||||||||  || ||||||||||| |||||||||| ||| ||||||||||||||||||||||||||||| ||||||| |||||| |||||    
T  32247091 aaaaaggcacaagaacacaatatatactagtcctcccctgaagaaatcgtgccacgatttccctagatcgtgtcacgatctgcaacggtccccaggttga 32247190  T
Q  161 ccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcactg 260  Q
    |||||| ||||||| |||| ||||| ||||||||||||||||||| |||||                     |||||| ||||||||||||||||||| |    
T  32247191 ccagtctttatcagtgatacttaacgagcaagtttctgaatcgtgccacga---------------------ttttgcatccagcaaacttggctcacgg 32247269  T
Q  261 cctctccgatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaatat 338  Q
    | ||||  |||||||||||||| | |||||| | ||||||||||||||||||||| ||||||||||||||||||||||    
T  32247270 catctcaaatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 32247347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 66 - 338
Target Start/End: Original strand, 14291849 - 14292120
Alignment:
Q  66 tgcacaagaacactttaaatactagtcctgccctgaagaattcgagccacgatttccctagatcgtgtcacgatgtgcaacgctccccaagt-tgaccag 164  Q
    |||||||||||||  || ||||||||| | | |||||||| ||| ||||||||||||  ||||||||||||||| |||      ||| | || |||||||    
T  14291849 tgcacaagaacacaatatatactagtcttcctctgaagaaatcgtgccacgatttcc--agatcgtgtcacgatttgcgtacaacccaaggtatgaccag 14291946  T
Q  165 tccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcactgcctc 264  Q
    |||||||||| | || ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| || ||| |||||| | |||||| ||  |    
T  14291947 tccttatcagtggtacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaac-tagctcacggcacc 14292045  T
Q  265 tc-cgatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaatat 338  Q
    ||  ||||||||||||||  | |||||| | ||||||||||||||||||||| ||||||||||||||||||||||    
T  14292046 tcgagatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 14292120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 57 - 338
Target Start/End: Complemental strand, 9296147 - 9295867
Alignment:
Q  57 ctccaaaaatgcacaagaacactttaaatactagtcctgccctgaagaattcgagccacgatttccctagatcgtgtcacgatgtgcaacgctccccaag 156  Q
    ||||||||| |||||||||||||||||||||||||| | | |||||| | ||| | |||||||| |  ||||||||||||||| |||  |   ||| | |    
T  9296147 ctccaaaaaagcacaagaacactttaaatactagtcttcctctgaagcaatcgtgtcacgattttc--agatcgtgtcacgatttgcgtccgacccaagg 9296050  T
Q  157 t-tgaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggct 255  Q
    | ||||||||||||||||  |||| ||||  ||||||||||||||||||| ||||||||||||||||||||||||||||| || ||| |||||| | |||    
T  9296049 tatgaccagtccttatcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcatcctgcaaac-tagct 9295951  T
Q  256 cactgc-ctctccgatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaatat 338  Q
    ||| || |  |   |||||||||||||  | |||||| | ||||||||||||||||||||| ||||||||||||||||||||||    
T  9295950 cacggcaccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 9295867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 66 - 338
Target Start/End: Complemental strand, 11098663 - 11098392
Alignment:
Q  66 tgcacaagaacactttaaatactagtcctgccctgaagaattcgagccacgatttccctagatcgtgtcacgatgtgcaacgctccccaag--ttgacca 163  Q
    |||||||||||||  || || |||||| | | |||||||| ||| ||||||||||||  ||||||||||||||| |||    |  ||||||  |||||||    
T  11098663 tgcacaagaacacaatatatgctagtcttcctctgaagaaatcgtgccacgatttcc--agatcgtgtcacgatttgcgta-caacccaaggtttgacca 11098567  T
Q  164 gtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcactgc-c 262  Q
    ||||||||||| |||| ||||| ||||||||||| ||||||| ||||||||||||||||||||||||||||| || ||| |||||| | |||||| || |    
T  11098566 gtccttatcagtgatacttaacgagcaagtttctaaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaac-tagctcacggcac 11098468  T
Q  263 tctccgatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaatat 338  Q
      |   |||||||||| ||  | |||||| | ||||||||||||||||||||| ||||||||||||||||||||||    
T  11098467 cttgaaatcgtgtcactatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 11098392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 159 - 336
Target Start/End: Original strand, 12647783 - 12647960
Alignment:
Q  159 gaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcac 258  Q
    |||||||||||||||  |||| ||||| ||||||||| || |||||| ||||||||||||  |||||||||||||||     || |||| | | ||||||    
T  12647783 gaccagtccttatcaaggatacttaacgagcaagtttatggatcgtgtcacgatttcccacaatcgtgccacgatttgcacccctgcaaccctagctcac 12647882  T
Q  259 tgcctctccgatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaat 336  Q
     || ||    |||||||||||||  | |||||| | ||||||||| ||||||||||| ||||||||||||||| ||||    
T  12647883 ggcatccgaaatcgtgtcacgatcccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat 12647960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 159 - 344
Target Start/End: Original strand, 25410081 - 25410266
Alignment:
Q  159 gaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcac 258  Q
    ||||| |||||||||  |||| ||||| |||||||||   ||||||| |||||||||||||||||||| |||||||| ||  || ||||||    |||||    
T  25410081 gaccattccttatcaaggatacttaacgagcaagtttgaaaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccat-ctcac 25410179  T
Q  259 tgcctctccga-tcgtgtcacgattgccaaa-tcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaatattcaaca 344  Q
     || || |  | ||||||||||| ||||||| ||| | ||||||||||||||||||||| ||||||||||||||||||| | ||||||    
T  25410180 ggcatcacaaaatcgtgtcacga-tgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaaaactcaaca 25410266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 286 - 343
Target Start/End: Complemental strand, 8389681 - 8389624
Alignment:
Q  286 aaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaatattcaac 343  Q
    |||||| | |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  8389681 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaatatacaac 8389624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 269 - 338
Target Start/End: Complemental strand, 44310545 - 44310476
Alignment:
Q  269 atcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaatat 338  Q
    |||||||||||||  | |||||| | ||||||||||||||||||||| ||||||||||||||||||||||    
T  44310545 atcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 44310476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 181 - 335
Target Start/End: Original strand, 3492214 - 3492368
Alignment:
Q  181 ttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcactgcctctc-cgatcgtgtcacg 279  Q
    ||||| |||||||||| |||||||| |||||||||||||||||||| |||||||| ||  || ||||||   |||||| || || |   |||||||||||    
T  3492214 ttaacgagcaagtttcagaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaac-cagctcacggcatcacaaaatcgtgtcacg 3492312  T
Q  280 attgccaaa-tcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaa 335  Q
    | ||||||| ||| | ||| |||||||||||||| || |||||||||||||||||||    
T  3492313 a-tgccaaattcgtgtcacaatttctctgttctttcagaccacaaatttgaagccaa 3492368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 159 - 331
Target Start/End: Original strand, 4484738 - 4484910
Alignment:
Q  159 gaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcac 258  Q
    ||||||||||||||| ||| | ||||| |||||||||   ||||||| ||||||| |  ||||||||| |||||||| ||  || ||||||| | |||||    
T  4484738 gaccagtccttatcatagaaacttaacgagcaagtttgcaaatcgtgtcacgattccttaagatcgtgtcacgatttggcaccctgcaaactag-ctcac 4484836  T
Q  259 tgcctc-tccgatcgtgtcacgattgccaaa-tcgcgacacgatttctctgttcttccaaaccacaaatttgaag 331  Q
     || || |   |||||||||||| ||||||| ||| | ||||||||||||||||||||| |||||||||||||||    
T  4484837 ggcatcatgaaatcgtgtcacga-tgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaag 4484910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 286 - 344
Target Start/End: Complemental strand, 10706783 - 10706725
Alignment:
Q  286 aaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaatattcaaca 344  Q
    |||||| | |||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  10706783 aaatcgtgtcacgatttctctgttcttccaaacaacaaatttgaagccaatatacaaca 10706725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 295 - 336
Target Start/End: Original strand, 20522797 - 20522838
Alignment:
Q  295 cacgatttctctgttcttccaaaccacaaatttgaagccaat 336  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  20522797 cacgatttctctgttcttccaaaccacaaatttgaagccaat 20522838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 295 - 336
Target Start/End: Complemental strand, 33528146 - 33528105
Alignment:
Q  295 cacgatttctctgttcttccaaaccacaaatttgaagccaat 336  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  33528146 cacgatttctctgttcttccaaaccacaaatttgaagccaat 33528105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 286 - 342
Target Start/End: Complemental strand, 36757475 - 36757419
Alignment:
Q  286 aaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaatattcaa 342  Q
    |||||| | |||||||| ||||||||||||||||||||||||||||||||| |||||    
T  36757475 aaatcgtgtcacgatttttctgttcttccaaaccacaaatttgaagccaattttcaa 36757419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 286 - 337
Target Start/End: Original strand, 21630511 - 21630562
Alignment:
Q  286 aaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaata 337  Q
    |||||| | |||||||||||||||||||||||| ||||||||||||||||||    
T  21630511 aaatcgtgtcacgatttctctgttcttccaaactacaaatttgaagccaata 21630562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 181 - 335
Target Start/End: Complemental strand, 30833084 - 30832930
Alignment:
Q  181 ttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcactgcctctccga-tcgtgtcacg 279  Q
    ||||| |||||||||   ||||||| |||||||||||||||||||| |||||||| ||  || ||||||  | ||||| || || |  | ||||||||||    
T  30833084 ttaacgagcaagtttgaaaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccag-ctcacggcatcacgaaatcgtgtcacg 30832986  T
Q  280 attgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaa 335  Q
    ||  | || ||  | ||||||||||||||||||||| |||||||||||||||||||    
T  30832985 atgtcaaattcatgtcacgatttctctgttcttccagaccacaaatttgaagccaa 30832930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 269 - 335
Target Start/End: Complemental strand, 32289223 - 32289157
Alignment:
Q  269 atcgtgtcacgattgccaaat-cgcgacacgatttctctgttcttccaaaccacaaatttgaagccaa 335  Q
    ||||||||||||| ||||||| || | ||||||||||||||||||||| |||||||||||||||||||    
T  32289223 atcgtgtcacgat-gccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 32289157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 286 - 337
Target Start/End: Original strand, 39483443 - 39483494
Alignment:
Q  286 aaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaata 337  Q
    |||||| | ||| |||||||||||||||||||||||||||||||||||||||    
T  39483443 aaatcgtgtcacaatttctctgttcttccaaaccacaaatttgaagccaata 39483494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 286 - 344
Target Start/End: Complemental strand, 23078002 - 23077944
Alignment:
Q  286 aaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaatattcaaca 344  Q
    |||||| | |||||||||||||||||||||||||| || |||||||||||||| |||||    
T  23078002 aaatcgtgtcacgatttctctgttcttccaaaccaaaattttgaagccaatatgcaaca 23077944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 286 - 344
Target Start/End: Complemental strand, 28258727 - 28258669
Alignment:
Q  286 aaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaatattcaaca 344  Q
    |||||| | ||||||||||||||| |||||||||||||||||||||||||  |||||||    
T  28258727 aaatcgtgtcacgatttctctgtttttccaaaccacaaatttgaagccaaatttcaaca 28258669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 269 - 335
Target Start/End: Original strand, 40739382 - 40739448
Alignment:
Q  269 atcgtgtcacgattgccaaa-tcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaa 335  Q
    |||||||||||| ||||||| ||| | |||||||| |||||||||||| |||||||||||||||||||    
T  40739382 atcgtgtcacga-tgccaaattcgtgtcacgatttgtctgttcttccagaccacaaatttgaagccaa 40739448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 298 - 344
Target Start/End: Original strand, 13569908 - 13569954
Alignment:
Q  298 gatttctctgttcttccaaaccacaaatttgaagccaatattcaaca 344  Q
    ||||| ||||||||| ||||||||||||||||||||||||| |||||    
T  13569908 gatttttctgttctttcaaaccacaaatttgaagccaatatacaaca 13569954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 269 - 309
Target Start/End: Complemental strand, 29867531 - 29867491
Alignment:
Q  269 atcgtgtcacgattgccaaatcgcgacacgatttctctgtt 309  Q
    ||||||||||| ||||||||||| | |||||||||||||||    
T  29867531 atcgtgtcacgcttgccaaatcgtgtcacgatttctctgtt 29867491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 226; Significance: 1e-124; HSPs: 67)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 34 - 335
Target Start/End: Complemental strand, 2672728 - 2672427
Alignment:
Q  34 tctcaaggttgtcttgaggttctctccaaaaatgcacaagaacactttaaatactagtcctgccctgaagaattcgagccacgatttccctagatcgtgt 133  Q
    ||||||||||||||| ||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  2672728 tctcaaggttgtcttaaggttctcttcaaaaaagcacaagaacactttaaatactagtcctgccctgaagaaatcgtgccacgatttccctagatcgtgt 2672629  T
Q  134 cacgatgtgcaacgctccccaagttgaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgat 233  Q
    |||||| ||||||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  2672628 cacgatctgcaacggtccccaggttgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtggcacgat 2672529  T
Q  234 tttgcttccagcaaacttggctcactgcctctccgatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagcc 333  Q
    ||||||||||||||||||||||| | || |||||||||||||||||||| | |||||| ||||||||| ||||||||||||| |||||||||||||||||    
T  2672528 tttgcttccagcaaacttggctcccggcatctccgatcgtgtcacgattacaaaatcgtgacacgattcctctgttcttccagaccacaaatttgaagcc 2672429  T
Q  334 aa 335  Q
    ||    
T  2672428 aa 2672427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 218; E-Value: 1e-119
Query Start/End: Original strand, 34 - 335
Target Start/End: Complemental strand, 2676884 - 2676583
Alignment:
Q  34 tctcaaggttgtcttgaggttctctccaaaaatgcacaagaacactttaaatactagtcctgccctgaagaattcgagccacgatttccctagatcgtgt 133  Q
    ||||||||||||||| ||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  2676884 tctcaaggttgtcttaaggttctcttcaaaaaagcacaagaacactttaaatactagtcctgccctgaagaaatcgtgccacgatttccctagatcgtgt 2676785  T
Q  134 cacgatgtgcaacgctccccaagttgaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgat 233  Q
    |||||| ||||||| |||||| |||||||||||||||||||||||  ||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  2676784 cacgatctgcaacggtccccaggttgaccagtccttatcagagattcttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtggcacgat 2676685  T
Q  234 tttgcttccagcaaacttggctcactgcctctccgatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagcc 333  Q
    ||||||||||||||||||||||| |  | |||||||||||||||||||| | |||||| ||||||||| ||||||||||||| |||||||||||||||||    
T  2676684 tttgcttccagcaaacttggctcccgacatctccgatcgtgtcacgattacaaaatcgtgacacgattcctctgttcttccagaccacaaatttgaagcc 2676585  T
Q  334 aa 335  Q
    ||    
T  2676584 aa 2676583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 67 - 336
Target Start/End: Original strand, 24968428 - 24968697
Alignment:
Q  67 gcacaagaacactttaaatactagtcctgccctgaagaattcgagccacgatttccctagatcgtgtcacgatgtgcaacgctccccaagttgaccagtc 166  Q
    |||||||||||||||||||||||||| |||||||||||| ||| |||||||||||||||||||||| |||||| ||||||| |||||| |||||||||||    
T  24968428 gcacaagaacactttaaatactagtcttgccctgaagaaatcgtgccacgatttccctagatcgtggcacgatttgcaacggtccccaggttgaccagtc 24968527  T
Q  167 cttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcactgcctctc 266  Q
    ||||||||||| | ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  24968528 cttatcagagaaacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcactgcctccc 24968627  T
Q  267 cgatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaat 336  Q
    ||||||||||||||||||||||||| ||||||||| || |||||||||||||||| ||||||||| ||||    
T  24968628 cgatcgtgtcacgattgccaaatcgtgacacgattcctttgttcttccaaaccactaatttgaagtcaat 24968697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 67 - 344
Target Start/End: Original strand, 32475795 - 32476072
Alignment:
Q  67 gcacaagaacactttaaatactagtcctgccctgaagaattcgagccacgatttccctagatcgtgtcacgatgtgcaacgctccccaagttgaccagtc 166  Q
    |||||||||||||||||||||||||||||||| |||||| ||| ||||||||||||||||||||||||||||| ||||||| |||||||| |||||||||    
T  32475795 gcacaagaacactttaaatactagtcctgcccagaagaaatcgtgccacgatttccctagatcgtgtcacgatatgcaacggtccccaagatgaccagtc 32475894  T
Q  167 cttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcactgcctctc 266  Q
    ||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| |||  |||||||||||||||||| |    
T  32475895 cttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgtcacgattttgctttcagagaacttggctcactgcctccc 32475994  T
Q  267 cgatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaatattcaaca 344  Q
     |||||||||||||| ||||||||| ||||||||| ||||||||| |||||||||||||||||||||||| |||||||    
T  32475995 tgatcgtgtcacgatggccaaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaatcttcaaca 32476072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 67 - 346
Target Start/End: Original strand, 32480653 - 32480932
Alignment:
Q  67 gcacaagaacactttaaatactagtcctgccctgaagaattcgagccacgatttccctagatcgtgtcacgatgtgcaacgctccccaagttgaccagtc 166  Q
    |||||||||||||||||||||||||||||||  |||||| ||| ||||||||||||||||||||||||||||| ||||||| |||||||| |||||||||    
T  32480653 gcacaagaacactttaaatactagtcctgcctagaagaaatcgtgccacgatttccctagatcgtgtcacgatatgcaacggtccccaagatgaccagtc 32480752  T
Q  167 cttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcactgcctctc 266  Q
    ||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| |||  |||||||||||||||||| |    
T  32480753 cttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgtcacgattttgctttcagagaacttggctcactgcctccc 32480852  T
Q  267 cgatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaatattcaacagt 346  Q
     |||||||||||||| ||||||||| ||||||||| ||||||||| |||||||||||||||||||||||| |||||||||    
T  32480853 tgatcgtgtcacgatggccaaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaatcttcaacagt 32480932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 67 - 336
Target Start/End: Original strand, 8512551 - 8512820
Alignment:
Q  67 gcacaagaacactttaaatactagtcctgccctgaagaattcgagccacgatttccctagatcgtgtcacgatgtgcaacgctccccaagttgaccagtc 166  Q
    ||||||||||||||||||||||||||||| ||||| ||| ||| ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||    
T  8512551 gcacaagaacactttaaatactagtcctgtcctgaggaaatcgtgccacgatttccctagatcgtgtcacgatctgcaacggtccccaagttgaccagtc 8512650  T
Q  167 cttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcactgcctctc 266  Q
    ||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |    
T  8512651 cttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttagctcactgcctccc 8512750  T
Q  267 cgatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaat 336  Q
     ||||||||||||| ||| |||||| ||||||||| ||||||||| ||||||||| ||||||||| ||||    
T  8512751 tgatcgtgtcacgactgcaaaatcgtgacacgattcctctgttctcccaaaccactaatttgaagtcaat 8512820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 67 - 336
Target Start/End: Original strand, 8517431 - 8517700
Alignment:
Q  67 gcacaagaacactttaaatactagtcctgccctgaagaattcgagccacgatttccctagatcgtgtcacgatgtgcaacgctccccaagttgaccagtc 166  Q
    ||||||||||||||||||||||||||||| ||||| ||| ||| ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||    
T  8517431 gcacaagaacactttaaatactagtcctgtcctgaggaaatcgtgccacgatttccctagatcgtgtcacgatctgcaacggtccccaagttgaccagtc 8517530  T
Q  167 cttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcactgcctctc 266  Q
    ||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |    
T  8517531 cttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttagctcactgcctccc 8517630  T
Q  267 cgatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaat 336  Q
     ||||||||||||| ||| |||||| ||||||||| ||||||||| | ||||||| ||||||||| ||||    
T  8517631 tgatcgtgtcacgactgcaaaatcgtgacacgattcctctgttctcctaaaccactaatttgaagtcaat 8517700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 170; E-Value: 4e-91
Query Start/End: Original strand, 34 - 338
Target Start/End: Original strand, 18656719 - 18657024
Alignment:
Q  34 tctcaaggttgtcttgaggttctctccaaaaatgcacaagaacactttaaatactagtcctgccctgaagaattcgagccacgatttccctagatcgtgt 133  Q
    ||||||||||||||| ||||| ||| |||||| ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  18656719 tctcaaggttgtcttaaggttgtcttcaaaaaagcacaagaacactttaaatactagtcctgccctgaagaaatcgtgccacgatttccctagatcgtgt 18656818  T
Q  134 cacgatgtgcaacgctccccaagttgaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgat 233  Q
    |||||| ||||||| |||||| ||||||||||||||||||| |||| ||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  18656819 cacgatctgcaacggtccccaggttgaccagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgtcacgat 18656918  T
Q  234 tttgcttccagcaaacttggctcactgcctctc-cgatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagc 332  Q
    || || ||| |||||||||  |||| ||  | |   |||||||||||||  | |||||| | || ||||||||||||||| || ||||||||||||||||    
T  18656919 ttggcgtcctgcaaacttgcttcacggcaccacgaaatcgtgtcacgatgccaaaatcgtgtcatgatttctctgttctttcagaccacaaatttgaagc 18657018  T
Q  333 caatat 338  Q
    ||||||    
T  18657019 caatat 18657024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 111 - 338
Target Start/End: Complemental strand, 22172893 - 22172667
Alignment:
Q  111 gccacgatttccctagatcgtgtcacgatgtgcaacgctccccaagttgaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacg 210  Q
    ||||||||||||| | ||||||||||||| |||||||   || | |||||||||||||||||||||||  ||||| ||||||||||||||||||| ||||    
T  22172893 gccacgatttcccaa-atcgtgtcacgatttgcaacggaaccaaggttgaccagtccttatcagagatccttaacgagcaagtttctgaatcgtgtcacg 22172795  T
Q  211 atttcccaagatcgtgccacgattttgcttccagcaaacttggctcactgcctctc-cgatcgtgtcacgattgccaaatcgcgacacgatttctctgtt 309  Q
    ||||||||||||||||||||||||| || ||| |||||| |||||||| ||  |||   |||||||||||||  | |||||| | |||||||||||||||    
T  22172794 atttcccaagatcgtgccacgatttggcgtcctgcaaac-tggctcacggcacctcgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgtt 22172696  T
Q  310 cttccaaaccacaaatttgaagccaatat 338  Q
    |||||| ||||||||||||||||||||||    
T  22172695 cttccagaccacaaatttgaagccaatat 22172667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 60 - 338
Target Start/End: Complemental strand, 28503602 - 28503324
Alignment:
Q  60 caaaaatgcacaagaacactttaaatactagtcctgccctgaagaattcgagccacgatttccctagatcgtgtcacgatgtgcaacgctccccaagttg 159  Q
    |||||| ||||||||||||  || ||||||||| | | |||||| | ||| ||||||||||||| ||||||||||||||| |||  |   ||| | ||||    
T  28503602 caaaaaagcacaagaacacaatatatactagtcttcctctgaagcaatcgtgccacgatttcccaagatcgtgtcacgatttgcgtctgacccaaggttg 28503503  T
Q  160 accagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcact 259  Q
    || |||||||||||| |||| ||||| ||||||||||||||| ||| ||||||||||||||||||||||||||||| || |||||||||| | ||||||     
T  28503502 acaagtccttatcagggatacttaacgagcaagtttctgaattgtgtcacgatttcccaagatcgtgccacgatttggcgtccagcaaac-tagctcacg 28503404  T
Q  260 gcctc-tccgatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaatat 338  Q
    ||| | |   |||||||||||||  | |||||| | |||||||||||||||||||||  |||||||||||||||||||||    
T  28503403 gccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaggccacaaatttgaagccaatat 28503324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 66 - 338
Target Start/End: Complemental strand, 40372532 - 40372261
Alignment:
Q  66 tgcacaagaacactttaaatactagtcctgccctgaagaattcgagccacgatttccctagatcgtgtcacgatgtgcaacgctccccaagt-tgaccag 164  Q
    |||||||||||||  || ||||||||| | | |||||||| ||| | ||||||||||  |||||||| |||||| |||  |  | |||| || |||||||    
T  40372532 tgcacaagaacacaatatatactagtcttcctctgaagaaatcgtgtcacgatttcc--agatcgtggcacgatttgcgtccgttcccaggtatgaccag 40372435  T
Q  165 tccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcactgcctc 264  Q
    |||||||||  |||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| || ||| |||||| | |||||| ||  |    
T  40372434 tccttatcaaggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaac-tagctcacggcacc 40372336  T
Q  265 tc-cgatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaatat 338  Q
    ||   |||||||||||||  | |||||| | ||||||||||||||||||||| ||||||||||||||||||||||    
T  40372335 tcgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 40372261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 60 - 338
Target Start/End: Complemental strand, 28501435 - 28501157
Alignment:
Q  60 caaaaatgcacaagaacactttaaatactagtcctgccctgaagaattcgagccacgatttccctagatcgtgtcacgatgtgcaacgctccccaagttg 159  Q
    |||||| ||||||| ||||  || ||||||||| | | |||||| | ||| ||||||||||||| ||||||||||| ||| |||  |   ||| | ||||    
T  28501435 caaaaaagcacaagtacacaatatatactagtcttcctctgaagcaatcgtgccacgatttcccaagatcgtgtcatgatttgcgtctgacccaaggttg 28501336  T
Q  160 accagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcact 259  Q
    || |||||||||||| |||| ||||| ||||||||||||||||||| |||||||| |||||||||||||||||||| |  ||| |||||| | ||||||     
T  28501335 acaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgattttccaagatcgtgccacgatttggtgtcctgcaaac-tagctcacg 28501237  T
Q  260 gcctc-tccgatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaatat 338  Q
    ||| | |   |||||||||||||  | |||||| | |||||||||||||||||||||  |||||||||||||||||||||    
T  28501236 gccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaggccacaaatttgaagccaatat 28501157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 158 - 336
Target Start/End: Original strand, 8477817 - 8477995
Alignment:
Q  158 tgaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctca 257  Q
    ||||||||||||||||  |||| ||||| ||||||||||| ||||||| ||||||||||||||||||||||||||||| || |||||||||| | |||||    
T  8477817 tgaccagtccttatcaaggatacttaacgagcaagtttctcaatcgtgtcacgatttcccaagatcgtgccacgatttggcatccagcaaac-tagctca 8477915  T
Q  258 ctgcctctc-cgatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaat 336  Q
    | ||  |||   |||||||||||||  | |||||| | ||| ||||||||||||||||| ||||||||||||||||||||    
T  8477916 cggcacctcgaaatcgtgtcacgatgccaaaatcgtgtcacaatttctctgttcttccagaccacaaatttgaagccaat 8477995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 158 - 338
Target Start/End: Original strand, 7167697 - 7167877
Alignment:
Q  158 tgaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctca 257  Q
    ||||||||||||||||| |||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| || ||| |||||| | |||||    
T  7167697 tgaccagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaac-tagctca 7167795  T
Q  258 ctgc-ctctccgatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaatat 338  Q
    | || |  |   || ||||||||||  | |||||| | ||||||||||||||||||||| | ||||||||||||||||||||    
T  7167796 cggcaccttgaaattgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaacacaaatttgaagccaatat 7167877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 158 - 235
Target Start/End: Complemental strand, 27352266 - 27352189
Alignment:
Q  158 tgaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattt 235  Q
    ||||||||||||||||| |||| ||||| ||||||||||||||||||| |||||||||||||||||||||||||||||    
T  27352266 tgaccagtccttatcagtgataattaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattt 27352189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 158 - 250
Target Start/End: Complemental strand, 8738708 - 8738616
Alignment:
Q  158 tgaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaact 250  Q
    ||||||||||||||||  |||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| || ||| |||||||    
T  8738708 tgaccagtccttatcaaggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttagcgtcctgcaaact 8738616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 158 - 250
Target Start/End: Complemental strand, 9090946 - 9090854
Alignment:
Q  158 tgaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaact 250  Q
    ||||||||||||||||  |||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| || ||| |||||||    
T  9090946 tgaccagtccttatcaaggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttagcgtcctgcaaact 9090854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 158 - 250
Target Start/End: Complemental strand, 2671250 - 2671158
Alignment:
Q  158 tgaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaact 250  Q
    ||||||||||||||||  |||| ||||| ||||||||||| ||||||| ||||||||||||||||||||||||||||| || ||| |||||||    
T  2671250 tgaccagtccttatcaaggatacttaacgagcaagtttctaaatcgtgtcacgatttcccaagatcgtgccacgatttggcatcctgcaaact 2671158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 159 - 336
Target Start/End: Complemental strand, 54634894 - 54634717
Alignment:
Q  159 gaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcac 258  Q
    |||||||||||||||  |||| ||||| ||||||||||   |||||| ||||||||||||  ||||||||||||||||||  || || ||||| ||||||    
T  54634894 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgccacgattttgcaccctgc-aacttagctcac 54634796  T
Q  259 tgcctctccg--atcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaat 336  Q
     | | | |||  |||||||||| ||  | |||||| | ||||||||| ||||||||||| ||||||||||||||| ||||    
T  54634795 -ggcaccccgaaatcgtgtcacaatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat 54634717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 159 - 336
Target Start/End: Original strand, 4598922 - 4599100
Alignment:
Q  159 gaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttccca-agatcgtgccacgattttgcttccagcaaacttggctca 257  Q
    |||||||||||||||  |||| ||||| |||||||||||  |||||| |||||||||||| | |||||||||||||||     || |||| | | |||||    
T  4598922 gaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgatttcccagaaatcgtgccacgatttgcacccctgcaaccctagctca 4599021  T
Q  258 ctgcctctccgatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaat 336  Q
    | || ||    |||||||| ||||  | |||||| | ||||||||| ||||||||||||||||||||||||||| ||||    
T  4599022 cggcatccgaaatcgtgtcgcgatcccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaat 4599100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 159 - 336
Target Start/End: Original strand, 4601143 - 4601321
Alignment:
Q  159 gaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttccca-agatcgtgccacgattttgcttccagcaaacttggctca 257  Q
    |||||||||||||||  |||| ||||| |||||||||||  |||||| |||||||||||| | |||||||||||||||     || |||| | | |||||    
T  4601143 gaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgatttcccagaaatcgtgccacgatttgcacccctgcaaccctagctca 4601242  T
Q  258 ctgcctctccgatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaat 336  Q
    | || ||    |||||||| ||||  | |||||| | ||||||||| ||||||||||||||||||||||||||| ||||    
T  4601243 cggcatccgaaatcgtgtcgcgatcccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaat 4601321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 286 - 344
Target Start/End: Original strand, 36029659 - 36029717
Alignment:
Q  286 aaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaatattcaaca 344  Q
    |||||| | |||||||||||||||||||||||||||||||||||||||||||| |||||    
T  36029659 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaatatacaaca 36029717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 286 - 338
Target Start/End: Complemental strand, 30709316 - 30709264
Alignment:
Q  286 aaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaatat 338  Q
    |||||| | ||||||||||||||||||||||||||||||||||||||||||||    
T  30709316 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaatat 30709264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 286 - 345
Target Start/End: Original strand, 16264896 - 16264955
Alignment:
Q  286 aaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaatattcaacag 345  Q
    |||||| | ||||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  16264896 aaatcgtgtcacgatttcgctgttcttccaaaccacaaatttgaagccaatatacaacag 16264955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 286 - 336
Target Start/End: Original strand, 21711768 - 21711818
Alignment:
Q  286 aaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaat 336  Q
    |||||| | ||||||||||||||||||||||||||||||||||||||||||    
T  21711768 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 21711818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 286 - 344
Target Start/End: Complemental strand, 27974491 - 27974433
Alignment:
Q  286 aaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaatattcaaca 344  Q
    |||||| | |||||||||||||||||||||||||||||||||||||||||  |||||||    
T  27974491 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatttcaaca 27974433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 269 - 335
Target Start/End: Original strand, 37726224 - 37726290
Alignment:
Q  269 atcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaa 335  Q
    |||||||||||||  | || ||| | |||||||||||||||||||||||||||||||||||||||||    
T  37726224 atcgtgtcacgatatcaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 37726290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 286 - 344
Target Start/End: Complemental strand, 39032075 - 39032017
Alignment:
Q  286 aaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaatattcaaca 344  Q
    |||||| | |||||||||||||||||||||||| ||||||||||||||||| |||||||    
T  39032075 aaatcgtgtcacgatttctctgttcttccaaacaacaaatttgaagccaattttcaaca 39032017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 295 - 336
Target Start/End: Complemental strand, 1730957 - 1730916
Alignment:
Q  295 cacgatttctctgttcttccaaaccacaaatttgaagccaat 336  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  1730957 cacgatttctctgttcttccaaaccacaaatttgaagccaat 1730916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 159 - 336
Target Start/End: Complemental strand, 6716269 - 6716092
Alignment:
Q  159 gaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcac 258  Q
    |||||||||||||||  |||| ||||| ||||||||||   |||||| ||||||||||||  |||||| |||||||||||  || || ||| | ||||||    
T  6716269 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgacacgattttgcaccctgc-aacctagctcac 6716171  T
Q  259 tgcctctccg--atcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaat 336  Q
     | | | |||  |||||||||||||  | |||||| | ||||||||| ||||||||||| ||||||||||| ||| ||||    
T  6716170 -ggcaccccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttcaagacaat 6716092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 295 - 338
Target Start/End: Complemental strand, 8738590 - 8738547
Alignment:
Q  295 cacgatttctctgttcttccaaaccacaaatttgaagccaatat 338  Q
    ||||||||||||||||||||| ||||||||||||||||||||||    
T  8738590 cacgatttctctgttcttccagaccacaaatttgaagccaatat 8738547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 295 - 338
Target Start/End: Complemental strand, 9090828 - 9090785
Alignment:
Q  295 cacgatttctctgttcttccaaaccacaaatttgaagccaatat 338  Q
    ||||||||||||||||||||| ||||||||||||||||||||||    
T  9090828 cacgatttctctgttcttccagaccacaaatttgaagccaatat 9090785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 269 - 335
Target Start/End: Original strand, 23200654 - 23200720
Alignment:
Q  269 atcgtgtcacgattgccaaa-tcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaa 335  Q
    |||||||||||| ||||||| ||| | ||||||||||||||||||||| |||||||||||||||||||    
T  23200654 atcgtgtcacga-tgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 23200720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 269 - 335
Target Start/End: Complemental strand, 26928155 - 26928089
Alignment:
Q  269 atcgtgtcacgattgccaaat-cgcgacacgatttctctgttcttccaaaccacaaatttgaagccaa 335  Q
    ||||||||||||| ||||||| || | ||||||||||||||||||||| |||||||||||||||||||    
T  26928155 atcgtgtcacgat-gccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 26928089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 269 - 335
Target Start/End: Complemental strand, 37408111 - 37408045
Alignment:
Q  269 atcgtgtcacgattgcca-aatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaa 335  Q
    ||||||||||||| |||| ||||| | |||||||||| ||||||||||||||||||||||||||||||    
T  37408111 atcgtgtcacgat-gccacaatcgtgtcacgatttctttgttcttccaaaccacaaatttgaagccaa 37408045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 159 - 336
Target Start/End: Complemental strand, 10208963 - 10208785
Alignment:
Q  159 gaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacga-tttcccaagatcgtgccacgattttgcttccagcaaacttggctca 257  Q
    |||||||||||||||  |||| ||||| |||||||||||  |||||| ||||| |||||||| |||||||||||||||     || |||| | |  ||||    
T  10208963 gaccagtccttatcaaggatatttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgccacgatttgcacccctgcaaccctaactca 10208864  T
Q  258 ctgcctctccgatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaat 336  Q
    | || ||    |||| ||||||||  | |||||| | || |||||| ||||||||||||||||||||||||||| ||||    
T  10208863 cggcatccgaaatcgcgtcacgataccaaaatcgtgtcatgatttccctgttcttccaaaccacaaatttgaagacaat 10208785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 269 - 335
Target Start/End: Original strand, 23198455 - 23198521
Alignment:
Q  269 atcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaa 335  Q
    |||||||||||||  | || ||| | ||||||||||||||||||||| |||||||||||||||||||    
T  23198455 atcgtgtcacgatgtcaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 23198521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 286 - 344
Target Start/End: Original strand, 27027273 - 27027331
Alignment:
Q  286 aaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaatattcaaca 344  Q
    |||||| | ||||||||||||||||||||||||||||||||||||| | || |||||||    
T  27027273 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagtctattttcaaca 27027331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 286 - 344
Target Start/End: Original strand, 27038608 - 27038666
Alignment:
Q  286 aaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaatattcaaca 344  Q
    |||||| | ||||||||||||||| |||||||||||||| ||||||||||| |||||||    
T  27038608 aaatcgtgtcacgatttctctgtttttccaaaccacaaacttgaagccaattttcaaca 27038666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 159 - 331
Target Start/End: Complemental strand, 10055990 - 10055817
Alignment:
Q  159 gaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgattt-cccaagatcgtgccacgattttgcttccagcaaacttggctca 257  Q
    |||||||||||||||  |||| ||||| |||||||||||  |||||| |||||||| ||||| |||||| ||||||||     || |||| | |  ||||    
T  10055990 gaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacgatttgcacccctgcaaccctaactca 10055891  T
Q  258 ctgcctctccgatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaag 331  Q
    | || ||    |||| ||||||||  | |||||| | ||||||||| |||||||||||||||||||||||||||    
T  10055890 cggcatccgaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaag 10055817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 159 - 331
Target Start/End: Complemental strand, 10058212 - 10058039
Alignment:
Q  159 gaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgattt-cccaagatcgtgccacgattttgcttccagcaaacttggctca 257  Q
    |||||||||||||||  |||| ||||| |||||||||||  |||||| |||||||| ||||| |||||| ||||||||     || |||| | |  ||||    
T  10058212 gaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacgatttgcacccctgcaaccctaactca 10058113  T
Q  258 ctgcctctccgatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaag 331  Q
    | || ||    |||| ||||||||  | |||||| | ||||||||| |||||||||||||||||||||||||||    
T  10058112 cggcatccgaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaag 10058039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 159 - 331
Target Start/End: Complemental strand, 10060434 - 10060261
Alignment:
Q  159 gaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgattt-cccaagatcgtgccacgattttgcttccagcaaacttggctca 257  Q
    |||||||||||||||  |||| ||||| |||||||||||  |||||| |||||||| ||||| |||||| ||||||||     || |||| | |  ||||    
T  10060434 gaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacgatttgcacccctgcaaccctaactca 10060335  T
Q  258 ctgcctctccgatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaag 331  Q
    | || ||    |||| ||||||||  | |||||| | ||||||||| |||||||||||||||||||||||||||    
T  10060334 cggcatccgaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaag 10060261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 159 - 331
Target Start/End: Complemental strand, 10062656 - 10062483
Alignment:
Q  159 gaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgattt-cccaagatcgtgccacgattttgcttccagcaaacttggctca 257  Q
    |||||||||||||||  |||| ||||| |||||||||||  |||||| |||||||| ||||| |||||| ||||||||     || |||| | |  ||||    
T  10062656 gaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacgatttgcacccctgcaaccctaactca 10062557  T
Q  258 ctgcctctccgatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaag 331  Q
    | || ||    |||| ||||||||  | |||||| | ||||||||| |||||||||||||||||||||||||||    
T  10062556 cggcatccgaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaag 10062483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 159 - 331
Target Start/End: Complemental strand, 10064878 - 10064705
Alignment:
Q  159 gaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgattt-cccaagatcgtgccacgattttgcttccagcaaacttggctca 257  Q
    |||||||||||||||  |||| ||||| |||||||||||  |||||| |||||||| ||||| |||||| ||||||||     || |||| | |  ||||    
T  10064878 gaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacgatttgcacccctgcaaccctaactca 10064779  T
Q  258 ctgcctctccgatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaag 331  Q
    | || ||    |||| ||||||||  | |||||| | ||||||||| |||||||||||||||||||||||||||    
T  10064778 cggcatccgaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaag 10064705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 159 - 331
Target Start/End: Complemental strand, 10067100 - 10066927
Alignment:
Q  159 gaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgattt-cccaagatcgtgccacgattttgcttccagcaaacttggctca 257  Q
    |||||||||||||||  |||| ||||| |||||||||||  |||||| |||||||| ||||| |||||| ||||||||     || |||| | |  ||||    
T  10067100 gaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacgatttgcacccctgcaaccctaactca 10067001  T
Q  258 ctgcctctccgatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaag 331  Q
    | || ||    |||| ||||||||  | |||||| | ||||||||| |||||||||||||||||||||||||||    
T  10067000 cggcatccgaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaag 10066927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 295 - 336
Target Start/End: Complemental strand, 40592293 - 40592252
Alignment:
Q  295 cacgatttctctgttcttccaaaccacaaatttgaagccaat 336  Q
    ||||||||||| ||||||||||||||||||||||||||||||    
T  40592293 cacgatttctccgttcttccaaaccacaaatttgaagccaat 40592252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 286 - 331
Target Start/End: Complemental strand, 40734132 - 40734087
Alignment:
Q  286 aaatcgcgacacgatttctctgttcttccaaaccacaaatttgaag 331  Q
    |||||| | |||||||||||||||||||||||||||||||||||||    
T  40734132 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 40734087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 159 - 235
Target Start/End: Complemental strand, 25637197 - 25637121
Alignment:
Q  159 gaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattt 235  Q
    |||||||||||||||  |||| ||||| ||||||||||   |||||| ||||||||||||  |||||||||||||||    
T  25637197 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgccacgattt 25637121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 286 - 338
Target Start/End: Original strand, 35926057 - 35926108
Alignment:
Q  286 aaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaatat 338  Q
    |||||| | ||||||||||||||||||||||||| ||||||||||||||||||    
T  35926057 aaatcgtgtcacgatttctctgttcttccaaacc-caaatttgaagccaatat 35926108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 269 - 336
Target Start/End: Complemental strand, 3617108 - 3617041
Alignment:
Q  269 atcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaat 336  Q
    |||||||||||||  | |||||| | ||||||||| ||||||||||| ||||||||||||||| ||||    
T  3617108 atcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat 3617041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 159 - 238
Target Start/End: Complemental strand, 6718453 - 6718374
Alignment:
Q  159 gaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgc 238  Q
    |||||||||||||||  |||| ||||| ||||||||||   |||||| ||||||||||||  |||||| |||||||||||    
T  6718453 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgacacgattttgc 6718374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 295 - 338
Target Start/End: Complemental strand, 16498685 - 16498642
Alignment:
Q  295 cacgatttctctgttcttccaaaccacaaatttgaagccaatat 338  Q
    |||||||||||||||  |||||||||||||||||||||||||||    
T  16498685 cacgatttctctgtttctccaaaccacaaatttgaagccaatat 16498642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 295 - 337
Target Start/End: Complemental strand, 24694697 - 24694654
Alignment:
Q  295 cacgatttctctgttcttccaaa-ccacaaatttgaagccaata 337  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  24694697 cacgatttctctgttcttccaaaaccacaaatttgaagccaata 24694654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 286 - 337
Target Start/End: Original strand, 48438782 - 48438833
Alignment:
Q  286 aaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaata 337  Q
    |||||| | |||||||||||||||||| |||||||||||||| |||||||||    
T  48438782 aaatcgtgtcacgatttctctgttcttacaaaccacaaatttaaagccaata 48438833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 181 - 335
Target Start/End: Original strand, 1306441 - 1306595
Alignment:
Q  181 ttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcactgcctctccga--tcgtgtcac 278  Q
    ||||| |||||||||  |||||||| |||||||||||||||||||| |||||||| ||  || ||||||  | ||||| | | |  |||  |||||||||    
T  1306441 ttaacgagcaagtttgagaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccag-ctcac-gacaccacgaaatcgtgtcac 1306538  T
Q  279 gattgccaaat-cgcgacacgatttctctgttcttccaaaccacaaatttgaagccaa 335  Q
    ||| ||||||| |  | ||||||||||||||||||||| |||| ||||||||||||||    
T  1306539 gat-gccaaattcatgtcacgatttctctgttcttccagaccataaatttgaagccaa 1306595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 159 - 336
Target Start/End: Complemental strand, 10211163 - 10210985
Alignment:
Q  159 gaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacga-tttcccaagatcgtgccacgattttgcttccagcaaacttggctca 257  Q
    |||||||||||||||  |||| ||||| |||||||||||  |||||| || || |||||||| |||||||||||||||     || |||| | |  ||||    
T  10211163 gaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcatgattttcccaaaatcgtgccacgatttgcacccctgcaaccctaactca 10211064  T
Q  258 ctgcctctccgatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaat 336  Q
    | || ||    |||| ||||||||  | |||||| | ||||||||| ||||||||||||||||||||||| ||| ||||    
T  10211063 cggcatcctaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttaaagacaat 10210985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 295 - 337
Target Start/End: Complemental strand, 47923368 - 47923326
Alignment:
Q  295 cacgatttctctgttcttccaaaccacaaatttgaagccaata 337  Q
    ||||||||||||||| || ||||||||||||||||||||||||    
T  47923368 cacgatttctctgttttttcaaaccacaaatttgaagccaata 47923326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 32143870 - 32143919
Alignment:
Q  286 aaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaa 335  Q
    |||||| | |||||||||||||||||| || |||||||||||||||||||    
T  32143870 aaatcgtgtcacgatttctctgttctttcagaccacaaatttgaagccaa 32143919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 330
Target Start/End: Complemental strand, 27986015 - 27985971
Alignment:
Q  286 aaatcgcgacacgatttctctgttcttccaaaccacaaatttgaa 330  Q
    |||||| | ||||||||||||||| ||||||||||||||||||||    
T  27986015 aaatcgtgtcacgatttctctgttattccaaaccacaaatttgaa 27985971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 269 - 335
Target Start/End: Original strand, 7782637 - 7782703
Alignment:
Q  269 atcgtgtcacgattgccaaa-tcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaa 335  Q
    |||||||||||| ||||||| ||| | ||||||||| ||||||||| | |||||||||||||||||||    
T  7782637 atcgtgtcacga-tgccaaattcgtgtcacgatttccctgttcttctagaccacaaatttgaagccaa 7782703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 269 - 335
Target Start/End: Complemental strand, 33386212 - 33386146
Alignment:
Q  269 atcgtgtcacgattgccaaat-cgcgacacgatttctctgttcttccaaaccacaaatttgaagccaa 335  Q
    ||||||||||||| ||||||| || | |||||||||||||||||| |  |||||||||||||||||||    
T  33386212 atcgtgtcacgat-gccaaattcgtgtcacgatttctctgttctttcggaccacaaatttgaagccaa 33386146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 286 - 336
Target Start/End: Complemental strand, 6718345 - 6718295
Alignment:
Q  286 aaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaat 336  Q
    |||||| | ||||||||| ||||||||||| ||||||||||||||| ||||    
T  6718345 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat 6718295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 269 - 307
Target Start/End: Original strand, 9634818 - 9634856
Alignment:
Q  269 atcgtgtcacgattgccaaatcgcgacacgatttctctg 307  Q
    ||||||||||||||||||||||| | |||||||||||||    
T  9634818 atcgtgtcacgattgccaaatcgtgtcacgatttctctg 9634856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 286 - 336
Target Start/End: Complemental strand, 45282642 - 45282592
Alignment:
Q  286 aaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaat 336  Q
    |||||| | ||||||||| ||||||||||| ||||||||||||||| ||||    
T  45282642 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat 45282592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 269 - 338
Target Start/End: Complemental strand, 27352155 - 27352086
Alignment:
Q  269 atcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaatat 338  Q
    |||||||||||||  | |||||| | |||||||| |||||||||| | ||||||||||| |||| |||||    
T  27352155 atcgtgtcacgatgccaaaatcgtgtcacgatttttctgttcttcgagaccacaaatttaaagctaatat 27352086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 286 - 331
Target Start/End: Complemental strand, 40735063 - 40735018
Alignment:
Q  286 aaatcgcgacacgatttctctgttcttccaaaccacaaatttgaag 331  Q
    |||||| | |||||||| ||||||| ||||||||||||||||||||    
T  40735063 aaatcgtgtcacgatttatctgttcatccaaaccacaaatttgaag 40735018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 269 - 336
Target Start/End: Complemental strand, 25637087 - 25637020
Alignment:
Q  269 atcgtgtcacgattgcca-aatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaat 336  Q
    ||||||||||||| |||| ||||| | ||||||||| ||||||||||| ||||||||||| ||| ||||    
T  25637087 atcgtgtcacgat-gccacaatcgtgtcacgatttccctgttcttccagaccacaaatttaaagacaat 25637020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197 (Bit Score: 219; Significance: 1e-120; HSPs: 2)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 50 - 344
Target Start/End: Complemental strand, 18957 - 18663
Alignment:
Q  50 aggttctctccaaaaatgcacaagaacactttaaatactagtcctgccctgaagaattcgagccacgatttccctagatcgtgtcacgatgtgcaacgct 149  Q
    ||||| ||| |||||| |||||||||||||||||||| |||||||||||||||||| ||| |||||||||||| |||||||||||||||| ||||||| |    
T  18957 aggttgtcttcaaaaaagcacaagaacactttaaatattagtcctgccctgaagaaatcgtgccacgatttccttagatcgtgtcacgatttgcaacggt 18858  T
Q  150 ccccaagttgaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaac 249  Q
    ||||| | ||||||||| |||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  18857 ccccaggatgaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtggcacgattttgcttccagcaaac 18758  T
Q  250 ttggctcactgcctctccgatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaatattcaaca 344  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| |||||||    
T  18757 ttagctcactgcctctccgatcgtgtcacgattgccaaatcgcgacacgattcctctgttctcccaaaccacaaatttgaagccaattttcaaca 18663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197; HSP #2
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 67 - 336
Target Start/End: Complemental strand, 14060 - 13791
Alignment:
Q  67 gcacaagaacactttaaatactagtcctgccctgaagaattcgagccacgatttccctagatcgtgtcacgatgtgcaacgctccccaagttgaccagtc 166  Q
    ||||||||||||||||||||||||||||| ||||| ||| ||| ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||    
T  14060 gcacaagaacactttaaatactagtcctgtcctgaggaaatcgtgccacgatttccctagatcgtgtcacgatctgcaacggtccccaagttgaccagtc 13961  T
Q  167 cttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcactgcctctc 266  Q
    ||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |    
T  13960 cttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttagctcactgcctccc 13861  T
Q  267 cgatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaat 336  Q
     ||||||||||||| ||| |||||| ||||||||| ||||||||| ||||||||| ||||||||| ||||    
T  13860 tgatcgtgtcacgactgcaaaatcgtgacacgattcctctgttctcccaaaccactaatttgaagtcaat 13791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 34 - 336
Target Start/End: Complemental strand, 2048 - 1746
Alignment:
Q  34 tctcaaggttgtcttgaggttctctccaaaaatgcacaagaacactttaaatactagtcctgccctgaagaattcgagccacgatttccctagatcgtgt 133  Q
    ||||||||||||||| |||||  || |||| | |||||||||||||||| |||||||||||||||||||||| ||| | |||||||||||||||||||||    
T  2048 tctcaaggttgtcttaaggttaccttcaaataagcacaagaacactttatatactagtcctgccctgaagaaatcgtgtcacgatttccctagatcgtgt 1949  T
Q  134 cacgatgtgcaacgctccccaagttgaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgat 233  Q
    |||||| ||||||| |||| | |||||||||||||||||||||| | ||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  1948 cacgatctgcaacggtcccaaggttgaccagtccttatcagagaaacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgat 1849  T
Q  234 tttgcttccagcaaacttggctcactgcctctccgatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagcc 333  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| ||||||||| |    
T  1848 tttgcttccagcaaacttggctcactgcctccccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttcttccaaaccactaatttgaagtc 1749  T
Q  334 aat 336  Q
    |||    
T  1748 aat 1746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 34 - 336
Target Start/End: Complemental strand, 148753 - 148451
Alignment:
Q  34 tctcaaggttgtcttgaggttctctccaaaaatgcacaagaacactttaaatactagtcctgccctgaagaattcgagccacgatttccctagatcgtgt 133  Q
    ||||||||||||||| |||||  || |||| | |||||||||||||||| |||||||||||||||||||||| ||| | |||||||||||||||||||||    
T  148753 tctcaaggttgtcttaaggttaccttcaaataagcacaagaacactttatatactagtcctgccctgaagaaatcgtgtcacgatttccctagatcgtgt 148654  T
Q  134 cacgatgtgcaacgctccccaagttgaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgat 233  Q
    |||||| ||||||| |||| | |||||||||||||||||||||| | ||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  148653 cacgatctgcaacggtcccaaggttgaccagtccttatcagagaaacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgat 148554  T
Q  234 tttgcttccagcaaacttggctcactgcctctccgatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagcc 333  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| ||||||||| |    
T  148553 tttgcttccagcaaacttggctcactgcctccccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttcttccaaaccactaatttgaagtc 148454  T
Q  334 aat 336  Q
    |||    
T  148453 aat 148451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 198; Significance: 1e-108; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 67 - 336
Target Start/End: Complemental strand, 24265953 - 24265684
Alignment:
Q  67 gcacaagaacactttaaatactagtcctgccctgaagaattcgagccacgatttccctagatcgtgtcacgatgtgcaacgctccccaagttgaccagtc 166  Q
    ||||||||||||||||||||||||||||| ||||| ||| ||| ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||    
T  24265953 gcacaagaacactttaaatactagtcctgtcctgaggaaatcgtgccacgatttccctagatcgtgtcacgatctgcaacggtccccaagttgaccagtc 24265854  T
Q  167 cttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcactgcctctc 266  Q
    ||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |    
T  24265853 cttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttagctcactgcctccc 24265754  T
Q  267 cgatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaat 336  Q
     ||||||||||||| ||| |||||| ||||||||| ||||||||| ||||||||| ||||||||| ||||    
T  24265753 tgatcgtgtcacgactgcaaaatcgtgacacgattcctctgttctcccaaaccactaatttgaagtcaat 24265684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 67 - 336
Target Start/End: Original strand, 16880384 - 16880653
Alignment:
Q  67 gcacaagaacactttaaatactagtcctgccctgaagaattcgagccacgatttccctagatcgtgtcacgatgtgcaacgctccccaagttgaccagtc 166  Q
    |||||||||||||||||||||||||||||||| |||||| ||| ||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||    
T  16880384 gcacaagaacactttaaatactagtcctgcccagaagaaatcgtgccacgatttccctagatcgtgtcacgatctgcaacggtccccaggttgaccagtc 16880483  T
Q  167 cttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcactgcctctc 266  Q
    ||||||||||| | ||||||||||||||||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||| ||||||||||||| |    
T  16880484 cttatcagagaaacttaaccagcaagtttctgaatcgtgtcacaatttcccaagatcgtgacacgattttgcttccagcaaactaggctcactgcctccc 16880583  T
Q  267 cgatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaat 336  Q
     |||||||||||||| || |||||| ||||||||| ||||| ||||||||||||| ||||||||| ||||    
T  16880584 tgatcgtgtcacgatggcaaaatcgtgacacgattcctctgctcttccaaaccactaatttgaagtcaat 16880653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 67 - 336
Target Start/End: Original strand, 16885239 - 16885508
Alignment:
Q  67 gcacaagaacactttaaatactagtcctgccctgaagaattcgagccacgatttccctagatcgtgtcacgatgtgcaacgctccccaagttgaccagtc 166  Q
    |||||||||||||||||||||||||||||||| |||||| ||| ||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||    
T  16885239 gcacaagaacactttaaatactagtcctgcccagaagaaatcgtgccacgatttccctagatcgtgtcacgatctgcaacggtccccaggttgaccagtc 16885338  T
Q  167 cttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcactgcctctc 266  Q
    ||||||||||| | ||||||||||||||||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||| ||||||||||||| |    
T  16885339 cttatcagagaaacttaaccagcaagtttctgaatcgtgtcacaatttcccaagatcgtgacacgattttgcttccagcaaactaggctcactgcctccc 16885438  T
Q  267 cgatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaat 336  Q
     |||||||||||||| || |||||| ||||||||| ||||| ||||||||||||| ||||||||| ||||    
T  16885439 tgatcgtgtcacgatggcaaaatcgtgacacgattcctctgctcttccaaaccactaatttgaagtcaat 16885508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 67 - 336
Target Start/End: Complemental strand, 24261097 - 24260828
Alignment:
Q  67 gcacaagaacactttaaatactagtcctgccctgaagaattcgagccacgatttccctagatcgtgtcacgatgtgcaacgctccccaagttgaccagtc 166  Q
    ||||||||||||||||||||||||||||| ||||| ||| ||| ||||||||||||||||||||||||||||| | ||||| ||| ||||||||||||||    
T  24261097 gcacaagaacactttaaatactagtcctgtcctgatgaaatcgtgccacgatttccctagatcgtgtcacgattttcaacggtcctcaagttgaccagtc 24260998  T
Q  167 cttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcactgcctctc 266  Q
    ||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| |||   ||||||||||||||||| |    
T  24260997 cttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgtcacgattttgctttcagattacttggctcactgcctccc 24260898  T
Q  267 cgatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaat 336  Q
     |||||||||||||| ||||||||| ||||||||| ||||||||| ||||||||||||||||||||||||    
T  24260897 tgatcgtgtcacgatggccaaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaat 24260828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 148; E-Value: 6e-78
Query Start/End: Original strand, 60 - 335
Target Start/End: Complemental strand, 21812022 - 21811747
Alignment:
Q  60 caaaaatgcacaagaacactttaaatactagtcctgccctgaagaattcgagccacgatttccctagatcgtgtcacgatgtgcaacgctccccaagttg 159  Q
    |||||| ||||||||||||  || ||||||||||||||||||  || ||| ||||||||||||| |||||||| ||| || ||||||| || ||| ||||    
T  21812022 caaaaaagcacaagaacacaatatatactagtcctgccctgagtaaatcgtgccacgatttcccaagatcgtgacacaatctgcaacggtctccaggttg 21811923  T
Q  160 accagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcact 259  Q
    |||||||||||||||||||| ||||| |||||||||||| |||||| ||||||||||||||||||||||||||||||||  || |||||| | ||||||     
T  21811922 accagtccttatcagagatacttaactagcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacattgctcacg 21811823  T
Q  260 gcctctccgatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaa 335  Q
    || |||| |||||||||||||| || |||||| ||||||||| ||||||||||||| |||||||||||||||||||    
T  21811822 gcatctcagatcgtgtcacgatggcaaaatcgtgacacgattcctctgttcttccagaccacaaatttgaagccaa 21811747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 60 - 338
Target Start/End: Complemental strand, 24024100 - 24023824
Alignment:
Q  60 caaaaatgcacaagaacactttaaatactagtcctgccctgaagaattcgagccacgatttccctagatcgtgtcacgatgtgcaacgctccccaagttg 159  Q
    |||||| ||||||||||||| ||  |||||||| | |||||||||| ||| ||||||||||||||||||||||||||||| ||||||| |||||| ||||    
T  24024100 caaaaaagcacaagaacactata--tactagtcttcccctgaagaaatcgtgccacgatttccctagatcgtgtcacgatctgcaacggtccccaggttg 24024003  T
Q  160 accagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcact 259  Q
    ||||||||||||||| |||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| || ||| |||||| | |||| ||    
T  24024002 accagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaac-tagctctct 24023904  T
Q  260 gcctc-tccgatcgtgtcacgattgcca-aatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaatat 338  Q
    ||| | |   |||||| ||||| ||||| ||||| | ||||||||||||||||||||| |||||||||||||||| |||||    
T  24023903 gccacttgaaatcgtgccacga-tgccacaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagctaatat 24023824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 60 - 336
Target Start/End: Complemental strand, 31109354 - 31109077
Alignment:
Q  60 caaaaatgcacaagaacactttaaatactagtcctgccctgaagaattcgagccacgatttccctagatcgtgtcacgatgtgcaacgctccccaagttg 159  Q
    |||||| ||||||||||||  || ||||||||| | | |||||||| ||| ||||||||||||||||||||||||||||| |||||||  ||| | |  |    
T  31109354 caaaaaagcacaagaacacaatatatactagtcttcctctgaagaaatcgtgccacgatttccctagatcgtgtcacgatctgcaacggccccaaggcag 31109255  T
Q  160 accagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcact 259  Q
    || ||||||||||||  ||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || ||| |||||||| ||| ||     
T  31109254 acaagtccttatcagttatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaacttagcttaca 31109155  T
Q  260 gcctc-tccgatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaat 336  Q
    | | | |   |||||| ||||||  | |||||| | ||||||||||||||||||||||||||||||||||||||||||    
T  31109154 ggcacttgaaatcgtgccacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 31109077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 60 - 338
Target Start/End: Original strand, 4873438 - 4873716
Alignment:
Q  60 caaaaatgcacaagaacactttaaatactagtcctgccctgaagaattcgagccacgatttccctagatcgtgtcacgatgtgcaacgctccccaagttg 159  Q
    |||||| ||||||||||||  || ||||||||| | | |||||||| ||| ||||||||||||||||||||||||||||| |||||||  ||| | |  |    
T  4873438 caaaaaagcacaagaacacaatatatactagtcttcctctgaagaaatcgtgccacgatttccctagatcgtgtcacgatttgcaacggacccaaggaag 4873537  T
Q  160 accagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcact 259  Q
    || |||||||||||| |||| ||||| ||||||||||||||| ||| ||||||||||||||||||||||||||||| || ||| |||||| |  || ||     
T  4873538 acaagtccttatcagtgatacttaacgagcaagtttctgaattgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaac-tatcttacg 4873636  T
Q  260 gcctc-tccgatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaatat 338  Q
    ||| | |   |||||||||||||  | |||||| | ||||||||||||||||||||| ||||||||||||||||||||||    
T  4873637 gccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 4873716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 84 - 338
Target Start/End: Original strand, 12406598 - 12406852
Alignment:
Q  84 atactagtcctgccctgaagaattcgagccacgatttccctagatcgtgtcacgatgtgcaacgctccccaagttgaccagtccttatcagagatagtta 183  Q
    ||||||||| | | |||||||| ||| ||||||||||||| | ||||||||||||| |||||||  ||| | || ||| |||||||||||| |||| |||    
T  12406598 atactagtcttcctctgaagaaatcgtgccacgatttccccaaatcgtgtcacgatttgcaacggacccaaggtagacaagtccttatcagtgatactta 12406697  T
Q  184 accagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcactgcctc-tccgatcgtgtcacgatt 282  Q
    || ||||||||||||||||||| ||||||||||||||||||||||||||||| || ||  |||||| | |||||| ||| | |   |||||||||||||     
T  12406698 acgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcttgcaaac-tagctcacggccacttgaaatcgtgtcacgatg 12406796  T
Q  283 gccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaatat 338  Q
     | |||||| | ||||||||||||||||||||| ||||||||||||||||||||||    
T  12406797 ccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 12406852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 158 - 338
Target Start/End: Original strand, 2058420 - 2058599
Alignment:
Q  158 tgaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctca 257  Q
    ||||||||||||||||  |||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| || ||| |||||| | |||||    
T  2058420 tgaccagtccttatcaaggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaac-tagctca 2058518  T
Q  258 ctgcctctccgatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaatat 338  Q
    | ||  |||  |||||||||||||  | |||||| | ||||||||||||||||||||| ||||||||||||||||||||||    
T  2058519 cggcacctcaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 2058599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 158 - 338
Target Start/End: Original strand, 21640238 - 21640418
Alignment:
Q  158 tgaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctca 257  Q
    ||||||||||||||||| |||| ||||  ||||||||||||||||||| |||||||||||||||||||| |||||||| || ||| |||||| | |||||    
T  21640238 tgaccagtccttatcagtgatacttaatgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgtcacgatttggcgtcctgcaaac-tagctca 21640336  T
Q  258 ctgcctctc-cgatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaatat 338  Q
    | ||  |||   |||||||||||||  | |||||| | ||||||||||||||||||||| ||||||||||||||||||||||    
T  21640337 cggcacctcgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 21640418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 157 - 338
Target Start/End: Complemental strand, 20357214 - 20357033
Alignment:
Q  157 ttgaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctc 256  Q
    |||||| ||||||||||  |||| ||||| |||||||||||||||| || ||||||||||||||||||||||||||||| || ||| |||||| | ||||    
T  20357214 ttgaccggtccttatcaaggatacttaacgagcaagtttctgaatcatgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaac-tagctc 20357116  T
Q  257 actgc-ctctccgatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaatat 338  Q
    || || |  |   |||||||||||||  | |||||| | ||||||||||||||||||||| ||||||||||||||||||||||    
T  20357115 acggcaccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 20357033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 61 - 223
Target Start/End: Original strand, 12397223 - 12397385
Alignment:
Q  61 aaaaatgcacaagaacactttaaatactagtcctgccctgaagaattcgagccacgatttccctagatcgtgtcacgatgtgcaacgctccccaagttga 160  Q
    ||||| ||||||||||||  || ||||||||  | | |||||||| ||| ||||||||||||| | ||||||||||||| |||||||  ||| | || ||    
T  12397223 aaaaaggcacaagaacacaatatatactagtattcctctgaagaaatcgtgccacgatttccccaaatcgtgtcacgatttgcaacggacccaaggtaga 12397322  T
Q  161 ccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatc 223  Q
    | |||||||||||| |||| ||||| ||||||||||||||||||| |||||||||||||||||    
T  12397323 caagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatc 12397385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 159 - 336
Target Start/End: Original strand, 18392596 - 18392773
Alignment:
Q  159 gaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcac 258  Q
    |||||||||||||||  |||| ||||| ||||||||||   |||||| |||||||| || | |||||| ||||| |||||  || |||| | | ||||||    
T  18392596 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgaatttgcaccctgcaaccctagctcac 18392695  T
Q  259 tgcctctccgatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaat 336  Q
     ||  |||| |||||||||||||| | |||||| | ||||||||| ||||||||||||||||||||||||||| ||||    
T  18392696 ggcacctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccaaaccacaaatttgaagacaat 18392773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 158 - 331
Target Start/End: Complemental strand, 24789612 - 24789439
Alignment:
Q  158 tgaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctca 257  Q
    ||||||||||||||||  |||| ||||| ||||||||||  ||||||| ||||||||||||||||||||||||||||| ||  || |||||| | |||||    
T  24789612 tgaccagtccttatcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgccacgatttggcaccctgcaaac-tagctca 24789514  T
Q  258 ctgcctctc-cgatcgtgtcacgattgccaaa-tcgcgacacgatttctctgttcttccaaaccacaaatttgaag 331  Q
    | ||  | |   |||||||||||| ||||||| ||| | ||||||||| ||||||||||| |||||||||||||||    
T  24789513 cggcaccacgaaatcgtgtcacga-tgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaag 24789439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 159 - 336
Target Start/End: Original strand, 6592737 - 6592914
Alignment:
Q  159 gaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcac 258  Q
    |||||||||||||||  |||| ||||| |||||||||||| |||||| |||||||| || | |||||||||||||||     || |||| | | ||||||    
T  6592737 gaccagtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgattttcccaaatcgtgccacgatttgcacccctgcaaccctagctcac 6592836  T
Q  259 tgcctctccgatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaat 336  Q
     || ||    |||||||||||||  | |||||| | ||||||||| ||||||||||| ||||||||||||||| ||||    
T  6592837 ggcatccgaaatcgtgtcacgatcccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat 6592914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 159 - 336
Target Start/End: Complemental strand, 20343684 - 20343507
Alignment:
Q  159 gaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcac 258  Q
    |||||||||||||||  |||| ||||| ||||||||||   |||||| ||||||||||||  |||||| ||||||||||| ||| |||| || | |||||    
T  20343684 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgacacgattttgcatccggcaacctag-ctcac 20343586  T
Q  259 tgcctctccga--tcgtgtcacgattgcca-aatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaat 336  Q
     ||  | ||||  |||||||||||| |||| ||||||| ||||||||| ||||||||||| ||||||||||||||| ||||    
T  20343585 ggcacc-ccgaaatcgtgtcacgat-gccacaatcgcgtcacgatttccctgttcttccagaccacaaatttgaagacaat 20343507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 158 - 335
Target Start/End: Original strand, 21646457 - 21646634
Alignment:
Q  158 tgaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctca 257  Q
    |||||||| |||||||  |||| ||||| |||||||||   ||||||| |||||||| ||||||||||| |||||||| ||  || ||||||  | ||||    
T  21646457 tgaccagttcttatcaaggatacttaacgagcaagtttgaaaatcgtgtcacgattttccaagatcgtgtcacgatttggcaccctgcaaaccag-ctca 21646555  T
Q  258 ctgcctctccga-tcgtgtcacgattgccaaatc-gcgacacgatttctctgttcttccaaaccacaaatttgaagccaa 335  Q
    | || || |  | |||||||||||| |||||||  | | |||||||||||||||||||||||||||||||||||||||||    
T  21646556 cggcatcacgaaatcgtgtcacgat-gccaaatttgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 21646634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 269 - 344
Target Start/End: Original strand, 21983792 - 21983867
Alignment:
Q  269 atcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaatattcaaca 344  Q
    |||||||||||||    |||||| | |||||||||||||||||||||||||||||||||||||||||| |||||||    
T  21983792 atcgtgtcacgatgatgaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaattttcaaca 21983867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 159 - 336
Target Start/End: Original strand, 6594953 - 6595130
Alignment:
Q  159 gaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcac 258  Q
    |||||||||||||||  |||| ||||| |||||||||||| |||||| |||||||| || | |||||||||||||||     || |||| | | ||||||    
T  6594953 gaccagtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgattttcccaaatcgtgccacgatttgcacccctgcaaccctagctcac 6595052  T
Q  259 tgcctctccgatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaat 336  Q
     || ||    |||||||||||||  | |||||| | ||||||||| ||||| ||||| ||||||||||||||| ||||    
T  6595053 ggcatccgaaatcgtgtcacgatcccaaaatcgtgtcacgatttccctgtttttccagaccacaaatttgaagacaat 6595130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 159 - 336
Target Start/End: Original strand, 32060704 - 32060881
Alignment:
Q  159 gaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcac 258  Q
    |||||||||||||||  |||| ||||| |||||||||||  |||||| |||||||| || | |||||||||||||||     || |||| | | ||||||    
T  32060704 gaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaatcgtgccacgatttgcacccctgcaaccctagctcac 32060803  T
Q  259 tgcctctccgatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaat 336  Q
     || ||    |||||||||||||  | |||||| | ||||||||| ||||||||||| ||||||||||||||| ||||    
T  32060804 ggcatccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat 32060881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 269 - 345
Target Start/End: Original strand, 47264192 - 47264268
Alignment:
Q  269 atcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaatattcaacag 345  Q
    |||||||||||||  | |||||| | |||||||||||| ||||||||||||||||||||||||||||  ||||||||    
T  47264192 atcgtgtcacgatgccaaaatcgtgtcacgatttctctattcttccaaaccacaaatttgaagccaaatttcaacag 47264268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 286 - 344
Target Start/End: Original strand, 79955 - 80013
Alignment:
Q  286 aaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaatattcaaca 344  Q
    |||||| | ||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  79955 aaatcgtgtcacgatttctctgttcttccaaatcacaaatttgaagccaatatacaaca 80013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 159 - 335
Target Start/End: Complemental strand, 39731118 - 39730942
Alignment:
Q  159 gaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcac 258  Q
    |||||||||||||||  || | ||||| |||||||||   ||||||| ||||||| | |||||||||| |||||||| ||  || ||||||  | |||||    
T  39731118 gaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgattcctcaagatcgtgtcacgatttggcaccctgcaaaccag-ctcac 39731020  T
Q  259 tgcctctccga-tcgtgtcacgattgccaaat-cgcgacacgatttctctgttcttccaaaccacaaatttgaagccaa 335  Q
     || || |  | |||||||||||| ||||||| || | ||||||||||||||||||||| |||||||||||||||||||    
T  39731019 ggcatcacaaaatcgtgtcacgat-gccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 39730942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 159 - 335
Target Start/End: Complemental strand, 48408583 - 48408407
Alignment:
Q  159 gaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcac 258  Q
    ||||||||||||||  ||| | ||||| |||||||||   ||||||| ||||||||| |||||||||| |||||||| ||  || ||||||  | |||||    
T  48408583 gaccagtccttatcctagaaacttaacgagcaagtttgcaaatcgtgtcacgatttctcaagatcgtgtcacgatttggcaccctgcaaaccag-ctcac 48408485  T
Q  259 tgcctctccga-tcgtgtcacgattgccaaat-cgcgacacgatttctctgttcttccaaaccacaaatttgaagccaa 335  Q
     || || |  | |||||||||||| ||||||| || | |||||||||||||||||| || |||||||||||||||||||    
T  48408484 ggcatcacaaaatcgtgtcacgat-gccaaattcgtgtcacgatttctctgttctttcagaccacaaatttgaagccaa 48408407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 269 - 338
Target Start/End: Original strand, 12397418 - 12397487
Alignment:
Q  269 atcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaatat 338  Q
    |||||||||||||  | |||||| | | ||||||||||||||||||| ||||||||||||||||||||||    
T  12397418 atcgtgtcacgataccaaaatcgtgtcgcgatttctctgttcttccagaccacaaatttgaagccaatat 12397487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 295 - 344
Target Start/End: Original strand, 21989482 - 21989531
Alignment:
Q  295 cacgatttctctgttcttccaaaccacaaatttgaagccaatattcaaca 344  Q
    |||||||||||||||||||||||||||||||||||||||||  |||||||    
T  21989482 cacgatttctctgttcttccaaaccacaaatttgaagccaactttcaaca 21989531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 160 - 235
Target Start/End: Complemental strand, 1533087 - 1533012
Alignment:
Q  160 accagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattt 235  Q
    ||||||||||||||  |||| ||||| || |||||||  ||||||| |||||||||||||||||||| ||||||||    
T  1533087 accagtccttatcaaggatacttaacgagtaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgattt 1533012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 269 - 344
Target Start/End: Original strand, 2479885 - 2479960
Alignment:
Q  269 atcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaatattcaaca 344  Q
    |||||||||||||  | |||||| | ||| |||||||||||||| ||||||||||||||||||||||  |||||||    
T  2479885 atcgtgtcacgatgccaaaatcgtgtcacaatttctctgttcttacaaaccacaaatttgaagccaaatttcaaca 2479960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 159 - 332
Target Start/End: Original strand, 43504536 - 43504709
Alignment:
Q  159 gaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcac 258  Q
    |||||||||||||||  || | ||||| |||||||||   ||||||| |||||||||||| ||||||| |||||||| ||  || ||||||   ||||||    
T  43504536 gaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacgatcgtgtcacgatttggcaccctgcaaac-cagctcac 43504634  T
Q  259 tgcctctc-cgatcgtgtcacgattgccaaa-tcgcgacacgatttctctgttcttccaaaccacaaatttgaagc 332  Q
     || || |   |||||||||||| ||||||| ||| | ||||||||| ||||||||||| ||||||||||||||||    
T  43504635 ggcatcacgaaatcgtgtcacga-tgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagc 43504709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 269 - 344
Target Start/End: Complemental strand, 44847694 - 44847619
Alignment:
Q  269 atcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaatattcaaca 344  Q
    |||||||||||||  | |||||| | ||||||||||||||||||  |||||||||||||||||||||  |||||||    
T  44847694 atcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttttaaaccacaaatttgaagccaaatttcaaca 44847619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 270 - 335
Target Start/End: Complemental strand, 1532958 - 1532893
Alignment:
Q  270 tcgtgtcacgattgccaaat-cgcgacacgatttctctgttcttccaaaccacaaatttgaagccaa 335  Q
    |||||||||||| ||||||| || | ||||||||||||||||||||| |||||||||||||||||||    
T  1532958 tcgtgtcacgat-gccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 1532893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 159 - 335
Target Start/End: Original strand, 18414090 - 18414266
Alignment:
Q  159 gaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcac 258  Q
    |||||||||||||||  || | ||||| |||||||||  ||||||||  ||||||||||||||||||| |||||||| ||  || ||||||   ||||||    
T  18414090 gaccagtccttatcatggaaacttaacaagcaagtttgagaatcgtgttacgatttcccaagatcgtgtcacgatttggcgccctgcaaac-cagctcac 18414188  T
Q  259 tgcctctc-cgatcgtgtcacgattgccaaa-tcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaa 335  Q
     ||  | |   |||||| ||||| ||||||| ||| | ||||||||||||||||||||| |||| ||||||||||||||    
T  18414189 ggcaccacaaaatcgtgccacga-tgccaaattcgtgtcacgatttctctgttcttccagaccataaatttgaagccaa 18414266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 269 - 336
Target Start/End: Original strand, 1562513 - 1562580
Alignment:
Q  269 atcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaat 336  Q
    |||||||||||||  | |||||| | ||||||||| ||||||||||| ||||||||||||||| ||||    
T  1562513 atcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat 1562580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 159 - 335
Target Start/End: Original strand, 18409214 - 18409390
Alignment:
Q  159 gaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcac 258  Q
    |||||||||||||||  || | ||||| |||||||||  |||||||| ||||||||| |||||||||| || ||||| ||  || ||||||   ||||||    
T  18409214 gaccagtccttatcatggaaacttaacaagcaagtttgagaatcgtgtcacgatttctcaagatcgtgtcatgatttggcaccctgcaaac-cagctcac 18409312  T
Q  259 tgcctctc-cgatcgtgtcacgattgccaaa-tcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaa 335  Q
     ||  | |   |||||||||||| ||||||| ||| |  |||||||||||||||||||| | |||||||||||||||||    
T  18409313 ggcaccacaaaatcgtgtcacga-tgccaaattcgtgttacgatttctctgttcttccagaacacaaatttgaagccaa 18409390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 159 - 235
Target Start/End: Original strand, 1562403 - 1562479
Alignment:
Q  159 gaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattt 235  Q
    |||||||||||||||  |||| ||||| ||||||||||   |||||| |||||||| |||| |||||| ||||||||    
T  1562403 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttaccaaaatcgtgacacgattt 1562479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 286 - 336
Target Start/End: Complemental strand, 46515860 - 46515809
Alignment:
Q  286 aaatcgcgacacgatttctctgttcttcc-aaaccacaaatttgaagccaat 336  Q
    |||||| | |||||||||||||||||||| |||||| |||||||||||||||    
T  46515860 aaatcgtgtcacgatttctctgttcttccaaaaccataaatttgaagccaat 46515809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 295 - 336
Target Start/End: Original strand, 18390514 - 18390555
Alignment:
Q  295 cacgatttctctgttcttccaaaccacaaatttgaagccaat 336  Q
    ||||||||| ||||||||| ||||||||||||||||| ||||    
T  18390514 cacgatttccctgttcttctaaaccacaaatttgaagacaat 18390555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 159 - 235
Target Start/End: Original strand, 25767361 - 25767437
Alignment:
Q  159 gaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattt 235  Q
    |||| |||||||||  ||| | ||||| |||||||||   ||||||| ||||||||||||| |||||| ||||||||    
T  25767361 gacctgtccttatcctagaaacttaacgagcaagtttgaaaatcgtgtcacgatttcccaaaatcgtgtcacgattt 25767437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 286 - 330
Target Start/End: Original strand, 49092238 - 49092282
Alignment:
Q  286 aaatcgcgacacgatttctctgttcttccaaaccacaaatttgaa 330  Q
    |||||| | ||| |||||||||||||||||||| |||||||||||    
T  49092238 aaatcgtgtcacaatttctctgttcttccaaactacaaatttgaa 49092282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 191; Significance: 1e-103; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 67 - 337
Target Start/End: Complemental strand, 176726 - 176456
Alignment:
Q  67 gcacaagaacactttaaatactagtcctgccctgaagaattcgagccacgatttccctagatcgtgtcacgatgtgcaacgctccccaagttgaccagtc 166  Q
    ||||||||||||||||||||||||||||| ||||| ||| ||| ||||||||||||||||||||||||||||| |||||||  ||| |||||||||||||    
T  176726 gcacaagaacactttaaatactagtcctgtcctgaggaaatcgtgccacgatttccctagatcgtgtcacgatctgcaacggacccaaagttgaccagtc 176627  T
Q  167 cttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcactgcctctc 266  Q
    ||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |    
T  176626 cttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttagctcactgcctccc 176527  T
Q  267 cgatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaata 337  Q
     ||||||||||||| ||| |||||| ||||||||| ||||||||| ||||||||| ||||||||| |||||    
T  176526 tgatcgtgtcacgactgcaaaatcgtgacacgattcctctgttctcccaaaccactaatttgaagtcaata 176456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464 (Bit Score: 176; Significance: 1e-94; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 45 - 336
Target Start/End: Original strand, 647 - 938
Alignment:
Q  45 tcttgaggttctctccaaaaatgcacaagaacactttaaatactagtcctgccctgaagaattcgagccacgatttccctagatcgtgtcacgatgtgca 144  Q
    |||| ||||| ||| |||||| ||||||||||||  || |||| |||||| |||||||||| ||| | ||||||||||||||||||||||||||| ||||    
T  647 tcttaaggttgtcttcaaaaaagcacaagaacacaatatataccagtcctcccctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgca 746  T
Q  145 acgctccccaagttgaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccag 244  Q
    |||   || |||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||    
T  747 acggaaccaaagttgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcatccag 846  T
Q  245 caaacttggctcactgcctctccgatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaat 336  Q
    |||||||||||||| ||  |||| |||||||||||||| | |||||| | ||||||||||||||||||||| ||||||||||||||||||||    
T  847 caaacttggctcacggcacctccaatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccataccacaaatttgaagccaat 938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 172; Significance: 3e-92; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 45 - 336
Target Start/End: Original strand, 18856011 - 18856302
Alignment:
Q  45 tcttgaggttctctccaaaaatgcacaagaacactttaaatactagtcctgccctgaagaattcgagccacgatttccctagatcgtgtcacgatgtgca 144  Q
    |||| ||||| ||| |||||| ||||||||||||  || ||||||||| | |||||||||| ||| ||||||||||||||||||| ||||||||| ||||    
T  18856011 tcttaaggttgtcttcaaaaaagcacaagaacacaatatatactagtcttcccctgaagaaatcgtgccacgatttccctagatcatgtcacgatctgca 18856110  T
Q  145 acgctccccaagttgaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccag 244  Q
    ||| | |||| ||||||||||||||||||| |||| ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| |||||    
T  18856111 acggttcccaggttgaccagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcttgccacgattttgcatccag 18856210  T
Q  245 caaacttggctcactgcctctccgatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaat 336  Q
    |||||||||||||| ||  |||| |||||||||||||| | |||||| | ||||||||||||||||||||| ||||||||||||||||||||    
T  18856211 caaacttggctcacggcacctccaatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 18856302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 45 - 336
Target Start/End: Complemental strand, 45347615 - 45347324
Alignment:
Q  45 tcttgaggttctctccaaaaatgcacaagaacactttaaatactagtcctgccctgaagaattcgagccacgatttccctagatcgtgtcacgatgtgca 144  Q
    |||| ||||| ||| |||||| ||||||||||||  || ||||||||  | |||||||||| ||| ||||||||||||||||||||||||||||| ||||    
T  45347615 tcttaaggttgtcttcaaaaaagcacaagaacacaatatatactagttttcccctgaagaaatcgtgccacgatttccctagatcgtgtcacgatctgca 45347516  T
Q  145 acgctccccaagttgaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccag 244  Q
    ||| | |||| ||||||||||||||||||| |||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||    
T  45347515 acggttcccaggttgaccagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcatccag 45347416  T
Q  245 caaacttggctcactgcctctccgatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaat 336  Q
    |||||||||||||| || ||||  |||||||||||||| | |||||| | |||||||||| |||||||||| ||||||||||||||||||||    
T  45347415 caaacttggctcacggcatctctaatcgtgtcacgattccaaaatcgtgtcacgatttctttgttcttccagaccacaaatttgaagccaat 45347324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 45 - 280
Target Start/End: Complemental strand, 45357096 - 45356861
Alignment:
Q  45 tcttgaggttctctccaaaaatgcacaagaacactttaaatactagtcctgccctgaagaattcgagccacgatttccctagatcgtgtcacgatgtgca 144  Q
    |||| ||||| ||| |||||| ||||||||||||  || ||||||||||| ||| |||||| ||| | ||||||||||||||||||||||||||| ||||    
T  45357096 tcttaaggttgtcttcaaaaaagcacaagaacacaatatatactagtcctccccagaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgca 45356997  T
Q  145 acgctccccaagttgaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccag 244  Q
    ||| | |||| ||||||||||||||||||| |||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||    
T  45356996 acggttcccaggttgaccagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcatccag 45356897  T
Q  245 caaacttggctcactgcctctccgatcgtgtcacga 280  Q
    |||||||||||||| || ||||  ||||||||||||    
T  45356896 caaacttggctcacggcatctcaaatcgtgtcacga 45356861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 68 - 338
Target Start/End: Original strand, 5732971 - 5733242
Alignment:
Q  68 cacaagaacactttaaatactagtcctgccctgaagaattcgagccacgatttccctagatcgtgtcacgatgtgcaacgctccccaagttgaccagtcc 167  Q
    |||||||||||  || ||||||||||| |||||||||| ||| ||||||||||||||||||||||||||||| ||||||| |||||| ||||||||||||    
T  5732971 cacaagaacacaatatatactagtcctcccctgaagaaatcgtgccacgatttccctagatcgtgtcacgatctgcaacggtccccaggttgaccagtcc 5733070  T
Q  168 ttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcactgcctctc- 266  Q
    ||||||| |||| ||||||||||||||||||||||||| |||||||||||||||||||| |||||||| || ||| |||||||||  |||| ||  | |     
T  5733071 ttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgtcacgatttggcgtcctgcaaacttgcttcacggcaccacg 5733170  T
Q  267 cgatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaatat 338  Q
      |||||||||||||  | |||||| | || ||||||||||||||| || ||||||||||||||||||||||    
T  5733171 aaatcgtgtcacgatgccaaaatcgtgtcatgatttctctgttctttcagaccacaaatttgaagccaatat 5733242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 60 - 338
Target Start/End: Complemental strand, 9228969 - 9228691
Alignment:
Q  60 caaaaatgcacaagaacactttaaatactagtcctgccctgaagaattcgagccacgatttccctagatcgtgtcacgatgtgcaacgctccccaagttg 159  Q
    |||||| ||||||||||||  || ||||||||| | | |||||||| ||| ||||||||||||||||||||||||||||| |||||||  ||| | || |    
T  9228969 caaaaaagcacaagaacacaatatatactagtcttcctctgaagaaatcgtgccacgatttccctagatcgtgtcacgatctgcaacggacccaaggtag 9228870  T
Q  160 accagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcact 259  Q
    || |||||||||||| |||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| || ||| ||||||   ||||||     
T  9228869 acaagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaac-gagctcacg 9228771  T
Q  260 gcctc-tccgatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaatat 338  Q
    ||| | |   |||||||||||||  | |||||| | ||||||||||||||||||||| ||||||||||||||||||||||    
T  9228770 gccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 9228691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 60 - 338
Target Start/End: Complemental strand, 56141795 - 56141516
Alignment:
Q  60 caaaaatgcacaagaacactttaaatactagtcctgccctgaagaattcgagccacgatttccctagatcgtgtcacgatgtgcaacgctccccaagttg 159  Q
    |||||| ||||||||||||  || ||||||||| | | |||||||| ||| ||||||||||||| ||||||||||||||| |||| |   ||| | || |    
T  56141795 caaaaaagcacaagaacacaatatatactagtcttcctctgaagaaatcgtgccacgatttcccaagatcgtgtcacgatttgcatctgacccaaggtag 56141696  T
Q  160 accagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgatttt-gcttccagcaaacttggctcac 258  Q
    ||||||||||||||| |||| ||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| || ||| |||||| | ||||||    
T  56141695 accagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttggcgtcctgcaaac-tagctcac 56141597  T
Q  259 tgcctctcc-gatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaatat 338  Q
      || ||||  |||||||||||||  | |||||| | ||||||||||||||||||||| ||||||||||||||||||||||    
T  56141596 gacccctccaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 56141516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 60 - 338
Target Start/End: Complemental strand, 9224182 - 9223904
Alignment:
Q  60 caaaaatgcacaagaacactttaaatactagtcctgccctgaagaattcgagccacgatttccctagatcgtgtcacgatgtgcaacgctccccaagttg 159  Q
    |||||| ||| ||||||||  || ||||||||| | | |||||||| | | ||||||||||||||||||||||||||||| |||||||  ||| | || |    
T  9224182 caaaaaagcagaagaacacaatatatactagtcttcctctgaagaaattgtgccacgatttccctagatcgtgtcacgatctgcaacggacccaaggtag 9224083  T
Q  160 accagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcact 259  Q
    || |||||||||||| |||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| || ||| |||||| | ||||||     
T  9224082 acaagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaac-tagctcacg 9223984  T
Q  260 gcctc-tccgatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaatat 338  Q
    ||| | |   |||||||||||||  | |||||| | ||||||||||||||||||||| ||||||||||||||||||||||    
T  9223983 gccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 9223904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 50 - 338
Target Start/End: Original strand, 3814313 - 3814600
Alignment:
Q  50 aggttctctccaaaaatgcacaagaacactttaaatactagtcctgccctgaagaattcgagccacgatttccctagatcgtgtcacgatgtgcaacgct 149  Q
    ||||| ||| |||||| ||||||||||||  || ||||||||| | |||||||||| ||| | ||||||||||||||||| ||||||||| ||||||| |    
T  3814313 aggttgtcttcaaaaaagcacaagaacacaatatatactagtcttcccctgaagaaatcgtgtcacgatttccctagatcttgtcacgatctgcaacggt 3814412  T
Q  150 ccccaagttgaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaac 249  Q
     | || ||||||||||||||||||| |||| ||||||||||||||||||||||||| ||||||||||||| |||||| |||||||| || ||  ||||||    
T  3814413 tctcaggttgaccagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaa-atcgtgacacgatttggcgtcttgcaaac 3814511  T
Q  250 ttggctcactgcctc-tccgatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaatat 338  Q
    || ||| || | | | |   |||||||||||||  | |||||| | ||||||||||||||||||||| ||||||||||||||||||||||    
T  3814512 tt-gcttacggtcacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 3814600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 60 - 250
Target Start/End: Complemental strand, 18712538 - 18712348
Alignment:
Q  60 caaaaatgcacaagaacactttaaatactagtcctgccctgaagaattcgagccacgatttccctagatcgtgtcacgatgtgcaacgctccccaagttg 159  Q
    |||||| ||||||||||||  || ||||||||| | |||||||||| ||| |||||||||| ||||||| |||||||||| | |||||  ||| | ||||    
T  18712538 caaaaaagcacaagaacacaatatatactagtcttcccctgaagaaatcgtgccacgattttcctagattgtgtcacgatcttcaacggacccaaggttg 18712439  T
Q  160 accagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaact 250  Q
    || |||||||||||| |||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| || ||| |||||||    
T  18712438 acaagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaact 18712348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 66 - 338
Target Start/End: Original strand, 24742301 - 24742572
Alignment:
Q  66 tgcacaagaacactttaaatactagtcctgccctgaagaattcgagccacgatttccctagatcgtgtcacgatgtgcaacgctccccaagt-tgaccag 164  Q
    |||||||||||||  || ||||||||| | | |||||||| ||| | ||||||||||  |||||||| |||||| |||  |  | |||| || |||||||    
T  24742301 tgcacaagaacacaatatatactagtcttcctctgaagaaatcgtgtcacgatttcc--agatcgtggcacgatttgcgtccgttcccaggtatgaccag 24742398  T
Q  165 tccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcactgcctc 264  Q
    |||||||||  |||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| || ||| |||||| | |||||| ||  |    
T  24742399 tccttatcaaggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaac-tagctcacggcacc 24742497  T
Q  265 tc-cgatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaatat 338  Q
    ||   |||||||||||||  | |||||| | ||||||||||||||||||||| ||||||||||||||||||||||    
T  24742498 tcgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 24742572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 61 - 338
Target Start/End: Original strand, 51520769 - 51521045
Alignment:
Q  61 aaaaatgcacaagaacactttaaatactagtcctgccctgaagaattcgagccacgatttccctagatcgtgtcacgatgtgcaacgctccccaagttga 160  Q
    ||||| ||||||||||||  || ||||||| | | | |||||| | | | ||||||||||||| | ||||||||||||| |||  |   ||| | || ||    
T  51520769 aaaaaagcacaagaacacaatatatactagccttcctctgaagcaattgtgccacgatttcccaa-atcgtgtcacgatttgcgtctgacccaaggtaga 51520867  T
Q  161 ccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcactg 260  Q
     ||||||||||||| |||| ||||| ||||||||||||||||||| || |||||||||||||||||||||||||| || ||| |||||| | |||||| |    
T  51520868 tcagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcatgatttcccaagatcgtgccacgatttggcgtcctgcaaac-tagctcacgg 51520966  T
Q  261 cctc-tccgatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaatat 338  Q
    || | |   |||||||||||||  | |||||| | ||||||||||||||||||||| ||||||||||||||||||||||    
T  51520967 ccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 51521045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 225 - 336
Target Start/End: Original strand, 18860403 - 18860514
Alignment:
Q  225 tgccacgattttgcttccagcaaacttggctcactgcctctccgatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaa 324  Q
    |||||||||||||| ||||||||||||||||||| ||  |||| |||||||||||||| | |||||| | ||||||||||||||||||||| ||||||||    
T  18860403 tgccacgattttgcatccagcaaacttggctcacggcacctccaatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccagaccacaaa 18860502  T
Q  325 tttgaagccaat 336  Q
    ||||||||||||    
T  18860503 tttgaagccaat 18860514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 158 - 250
Target Start/End: Original strand, 29761073 - 29761165
Alignment:
Q  158 tgaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaact 250  Q
    ||||||||||||||||  |||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| || ||| |||||||    
T  29761073 tgaccagtccttatcaaggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaact 29761165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 159 - 331
Target Start/End: Complemental strand, 7122451 - 7122279
Alignment:
Q  159 gaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcac 258  Q
    |||||||||||||||  |||| ||||| |||||||||||| |||||| ||||||||||||  |||||||||||||||     || |||| | | ||||||    
T  7122451 gaccagtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgatttcccacaatcgtgccacgatttgcacccctgcaaccctagctcac 7122352  T
Q  259 tgcctctccgatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaag 331  Q
     || ||    |||||||||||||  | |||||| | ||||||||| ||||||||||| |||||||||||||||    
T  7122351 ggcatccgaaatcgtgtcacgatcccaaaatcgtgtcacgatttccctgttcttccacaccacaaatttgaag 7122279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 159 - 331
Target Start/End: Complemental strand, 7124673 - 7124501
Alignment:
Q  159 gaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcac 258  Q
    |||||||||||||||  |||| ||||| |||||||||||| |||||| ||||||||||||  |||||||||||||||     || |||| | | ||||||    
T  7124673 gaccagtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgatttcccacaatcgtgccacgatttgcacccctgcaaccctagctcac 7124574  T
Q  259 tgcctctccgatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaag 331  Q
     || ||    |||||||||||||  | |||||| | ||||||||| ||||||||||| |||||||||||||||    
T  7124573 ggcatccgaaatcgtgtcacgatcccaaaatcgtgtcacgatttccctgttcttccacaccacaaatttgaag 7124501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 159 - 336
Target Start/End: Complemental strand, 8393166 - 8392989
Alignment:
Q  159 gaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcac 258  Q
    |||||||||||||||  |||| ||||| |||||||||||| |||||| |||||||| || | |||||||||||||||     || |||| | | ||||||    
T  8393166 gaccagtccttatcacggatacttaacgagcaagtttctggatcgtgtcacgattttcccaaatcgtgccacgatttgcacccctgcaaccctagctcac 8393067  T
Q  259 tgcctctccgatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaat 336  Q
     || ||    |||||||||||||  | |||||| | ||||||||| ||||||||||| ||||||||||||||| ||||    
T  8393066 ggcatccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat 8392989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 280 - 344
Target Start/End: Original strand, 5143803 - 5143867
Alignment:
Q  280 attgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaatattcaaca 344  Q
    ||||| |||||| | |||||||||||||||||||||||||||||||||||||||||| |||||||    
T  5143803 attgcaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaattttcaaca 5143867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 286 - 344
Target Start/End: Complemental strand, 16628403 - 16628345
Alignment:
Q  286 aaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaatattcaaca 344  Q
    |||||| | |||||||||||||||||||||||||||||||||||||||||||| |||||    
T  16628403 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaatatacaaca 16628345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 159 - 335
Target Start/End: Complemental strand, 28468162 - 28467986
Alignment:
Q  159 gaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcac 258  Q
    ||||||||||||||| ||| | ||||| |||||||||   ||||||| |||||||| ||||||||||| |||||||| ||  || ||||||  | |||||    
T  28468162 gaccagtccttatcatagaaacttaacgagcaagtttgaaaatcgtgtcacgattttccaagatcgtgtcacgatttggcaccctgcaaaccag-ctcac 28468064  T
Q  259 tgcctctccga-tcgtgtcacgattgccaaat-cgcgacacgatttctctgttcttccaaaccacaaatttgaagccaa 335  Q
     || || |  | |||||| ||||| ||||||| || | ||||||||||||||||||||| |||||||||||||||||||    
T  28468063 ggcatcacaaaatcgtgttacgat-gccaaattcgtgtcacgatttctctgttcttccataccacaaatttgaagccaa 28467986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 286 - 344
Target Start/End: Complemental strand, 38151968 - 38151910
Alignment:
Q  286 aaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaatattcaaca 344  Q
    |||||| | |||||||||||||||||||||||||||||||||||||||||||| |||||    
T  38151968 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaatatacaaca 38151910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 295 - 344
Target Start/End: Original strand, 3778124 - 3778173
Alignment:
Q  295 cacgatttctctgttcttccaaaccacaaatttgaagccaatattcaaca 344  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||    
T  3778124 cacgatttctctgttcttccaaaccacaaatttgaagccaatatacaaca 3778173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 286 - 342
Target Start/End: Complemental strand, 8689094 - 8689038
Alignment:
Q  286 aaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaatattcaa 342  Q
    |||||| | |||||||||||||||||||||||||||||||||||||||||| |||||    
T  8689094 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaattttcaa 8689038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 286 - 344
Target Start/End: Original strand, 5148244 - 5148302
Alignment:
Q  286 aaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaatattcaaca 344  Q
    |||||| | |||||||||||| ||||||||||||||||||||||||||||| |||||||    
T  5148244 aaatcgtgtcacgatttctctattcttccaaaccacaaatttgaagccaattttcaaca 5148302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 286 - 344
Target Start/End: Complemental strand, 16622824 - 16622766
Alignment:
Q  286 aaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaatattcaaca 344  Q
    |||||| | ||||||||||||||||||||||||||||||||| |||||||||| |||||    
T  16622824 aaatcgtgtcacgatttctctgttcttccaaaccacaaattttaagccaatatacaaca 16622766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 295 - 336
Target Start/End: Complemental strand, 5268740 - 5268699
Alignment:
Q  295 cacgatttctctgttcttccaaaccacaaatttgaagccaat 336  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  5268740 cacgatttctctgttcttccaaaccacaaatttgaagccaat 5268699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 159 - 336
Target Start/End: Complemental strand, 8395375 - 8395198
Alignment:
Q  159 gaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcac 258  Q
    |||||||||||||||  |||| ||||| |||||||||||| || ||| |||||||| || | ||||||| |||||||     || |||| | | ||||||    
T  8395375 gaccagtccttatcacggatacttaacgagcaagtttctggattgtgtcacgattttcccaaatcgtgctacgatttgcacccctgcaaccctagctcac 8395276  T
Q  259 tgcctctccgatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaat 336  Q
     || ||    |||||||||||||  | |||||| | ||||||||| ||||||||||| ||||||||||||||| ||||    
T  8395275 ggcatccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat 8395198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 295 - 346
Target Start/End: Complemental strand, 5396213 - 5396162
Alignment:
Q  295 cacgatttctctgttcttccaaaccacaaatttgaagccaatattcaacagt 346  Q
    |||||||||||||||||| ||||||||||||||||||| ||| |||||||||    
T  5396213 cacgatttctctgttctttcaaaccacaaatttgaagctaattttcaacagt 5396162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 286 - 337
Target Start/End: Original strand, 10047932 - 10047983
Alignment:
Q  286 aaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaata 337  Q
    |||||| | |||||||| ||||||||||||||||||||||||||||||||||    
T  10047932 aaatcgtgtcacgatttatctgttcttccaaaccacaaatttgaagccaata 10047983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 269 - 335
Target Start/End: Original strand, 13992804 - 13992870
Alignment:
Q  269 atcgtgtcacgattgccaaa-tcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaa 335  Q
    |||||||||||| ||||||| ||| | ||||||||||||||||||||| |||||||||||||||||||    
T  13992804 atcgtgtcacga-tgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 13992870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 286 - 336
Target Start/End: Complemental strand, 6742946 - 6742896
Alignment:
Q  286 aaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaat 336  Q
    |||||| | |||||||||||||||||||||||||| |||||||||||||||    
T  6742946 aaatcgtgtcacgatttctctgttcttccaaaccataaatttgaagccaat 6742896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 286 - 338
Target Start/End: Original strand, 29761182 - 29761234
Alignment:
Q  286 aaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaatat 338  Q
    |||||| | ||||||||||||||||||||| |||||||||||||||| |||||    
T  29761182 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagcaaatat 29761234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 159 - 331
Target Start/End: Original strand, 31495717 - 31495889
Alignment:
Q  159 gaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcac 258  Q
    |||||||||||||||  || | ||||| |||||||||   ||||||| ||||||||||||  |||||| |||||||| ||  || ||||||  | |||||    
T  31495717 gaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcacgatttggcaccctgcaaaccag-ctcac 31495815  T
Q  259 tgcctctccga-tcgtgtcacgattgccaaa-tcgcgacacgatttctctgttcttccaaaccacaaatttgaag 331  Q
     || || |  | ||||||||||| ||||||| ||| | ||||||||| ||||||||||| |||||||||||||||    
T  31495816 ggcatcacgaaatcgtgtcacga-tgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaag 31495889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 286 - 336
Target Start/End: Original strand, 54867745 - 54867795
Alignment:
Q  286 aaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaat 336  Q
    |||||| | ||||| |||||| |||||||||||||||||||||||||||||    
T  54867745 aaatcgtgtcacgacttctctattcttccaaaccacaaatttgaagccaat 54867795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 337
Target Start/End: Original strand, 9194164 - 9194216
Alignment:
Q  286 aaatcgcgacacgatttctctgttcttccaaa-ccacaaatttgaagccaata 337  Q
    |||||| | ||| ||||||||||||||||||| ||||||||||||||||||||    
T  9194164 aaatcgtgtcacaatttctctgttcttccaaaaccacaaatttgaagccaata 9194216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 269 - 336
Target Start/End: Complemental strand, 5135723 - 5135656
Alignment:
Q  269 atcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaat 336  Q
    |||| ||||||||  | |||||| | ||||||||| |||||||||||| |||||||||||||| ||||    
T  5135723 atcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaagccacaaatttgaagacaat 5135656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 269 - 336
Target Start/End: Complemental strand, 5137949 - 5137882
Alignment:
Q  269 atcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaat 336  Q
    |||| ||||||||  | |||||| | ||||||||| |||||||||||| |||||||||||||| ||||    
T  5137949 atcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaagccacaaatttgaagacaat 5137882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 269 - 335
Target Start/End: Complemental strand, 31985202 - 31985136
Alignment:
Q  269 atcgtgtcacgattgccaaat-cgcgacacgatttctctgttcttccaaaccacaaatttgaagccaa 335  Q
    ||||||||||||| ||||||| || | |||||||||||||||||| || | |||||||||||||||||    
T  31985202 atcgtgtcacgat-gccaaattcgtgtcacgatttctctgttctttcagatcacaaatttgaagccaa 31985136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 286 - 332
Target Start/End: Complemental strand, 36314761 - 36314715
Alignment:
Q  286 aaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagc 332  Q
    |||||| | |||||||||||| |||||| ||||||||||||||||||    
T  36314761 aaatcgtgtcacgatttctctattcttcgaaaccacaaatttgaagc 36314715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 286 - 332
Target Start/End: Complemental strand, 36328970 - 36328924
Alignment:
Q  286 aaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagc 332  Q
    |||||| | |||||||||||| |||||| ||||||||||||||||||    
T  36328970 aaatcgtgtcacgatttctctattcttcgaaaccacaaatttgaagc 36328924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 159 - 235
Target Start/End: Complemental strand, 5135834 - 5135757
Alignment:
Q  159 gaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacga-tttcccaagatcgtgccacgattt 235  Q
    |||| ||||||||||  |||| ||||| |||||||||||  |||||| ||||| |||||||| |||||| ||||||||    
T  5135834 gaccggtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgacacgattt 5135757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 159 - 235
Target Start/End: Complemental strand, 5138060 - 5137983
Alignment:
Q  159 gaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacga-tttcccaagatcgtgccacgattt 235  Q
    |||| ||||||||||  |||| ||||| |||||||||||  |||||| ||||| |||||||| |||||| ||||||||    
T  5138060 gaccggtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgacacgattt 5137983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 158 - 235
Target Start/End: Original strand, 13992693 - 13992770
Alignment:
Q  158 tgaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattt 235  Q
    ||||||||||||||||   | | ||||| |||||||||   ||||||| ||||||||||||| |||||| ||||||||    
T  13992693 tgaccagtccttatcatgaaaacttaacgagcaagtttgaaaatcgtgtcacgatttcccaaaatcgtgtcacgattt 13992770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355 (Bit Score: 115; Significance: 3e-58; HSPs: 1)
Name: scaffold0355
Description:

Target: scaffold0355; HSP #1
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 61 - 338
Target Start/End: Complemental strand, 3619 - 3342
Alignment:
Q  61 aaaaatgcacaagaacactttaaatactagtcctgccctgaagaattcgagccacgatttccctagatcgtgtcacgatgtgcaacgctccccaagttga 160  Q
    ||||| ||||||||| ||  || ||||||||| | |||||||||| ||| | |||||||| |||||||||||||||||| ||||||| |||||| |||||    
T  3619 aaaaaagcacaagaatacaatatatactagtcttcccctgaagaaatcgtgtcacgattttcctagatcgtgtcacgatctgcaacggtccccaggttga 3520  T
Q  161 ccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcactg 260  Q
    | |||||||||||  |||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| || |||  ||||| | |||||| |    
T  3519 ctagtccttatcattgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtccttcaaac-tagctcacgg 3421  T
Q  261 cctc-tccgatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaatat 338  Q
    || | |   |||||||||||||  | |||||| | |||||||||||| |||||||| ||||||||||||||||||||||    
T  3420 ccacttgaaatcgtgtcacgatgtcaaaatcgtgtcacgatttctcttttcttccagaccacaaatttgaagccaatat 3342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135 (Bit Score: 96; Significance: 6e-47; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 60 - 338
Target Start/End: Complemental strand, 34837 - 34559
Alignment:
Q  60 caaaaatgcacaagaacactttaaatactagtcctgccctgaagaattcgagccacgatttccctagatcgtgtcacgatgtgcaacgctccccaagttg 159  Q
    |||||| ||| ||||||||  || ||||||||| | | |||||||| | | ||||||||||||||||||||||||||||| |||||||  ||| | || |    
T  34837 caaaaaagcaaaagaacacaatatatactagtcttcctctgaagaaatagtgccacgatttccctagatcgtgtcacgatctgcaacggacccaaggtag 34738  T
Q  160 accagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcact 259  Q
    || |||||||||||| |||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| || ||  ||||||    || ||     
T  34737 acaagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcatgcaaac-aaactaacg 34639  T
Q  260 gcctc-tccgatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaatat 338  Q
    ||| | |   || ||||||||||  | |||||| | ||||||||||||||||||||| ||||||||||||||||||||||    
T  34638 gccacttgaaatagtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 34559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0665 (Bit Score: 59; Significance: 8e-25; HSPs: 2)
Name: scaffold0665
Description:

Target: scaffold0665; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 156 - 250
Target Start/End: Original strand, 8105 - 8199
Alignment:
Q  156 gttgaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaact 250  Q
    |||||| |||||||||||| |||| ||||| ||||||||||||||||||| |||||||| |||||||||||||||||||| || ||| |||||||    
T  8105 gttgacaagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgattttccaagatcgtgccacgatttggcgtcctgcaaact 8199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0665; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 286 - 338
Target Start/End: Original strand, 8216 - 8268
Alignment:
Q  286 aaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaatat 338  Q
    |||||| | ||||||||||||||||||||| ||||||||||||||||||||||    
T  8216 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 8268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0674 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 159 - 336
Target Start/End: Original strand, 4126 - 4303
Alignment:
Q  159 gaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcac 258  Q
    |||||||||||||||  |||| ||||| |||||||||||| |||||| ||||||||||||  |||||||||||||||     || |||| | | ||||||    
T  4126 gaccagtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgatttcccacaatcgtgccacgatttgcacccctgcaaccctagctcac 4225  T
Q  259 tgcctctccgatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaat 336  Q
     ||  ||   |||||||||||||| | |||||| | ||||||||| ||||||||||| ||||||||||||||| ||||    
T  4226 ggcacctaaaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaat 4303  T

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Target: scaffold0286 (Bit Score: 51; Significance: 5e-20; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 159 - 335
Target Start/End: Complemental strand, 22124 - 21948
Alignment:
Q  159 gaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcac 258  Q
    |||| ||||||||||| |||| ||||| |||||||||   ||||||| |||||||||||||||||||| |||||||| || ||| |||||| | ||||||    
T  22124 gacctgtccttatcagtgatacttaacgagcaagttttacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcgtcctgcaaac-tagctcac 22026  T
Q  259 tgcctctc-cgatcgtgtcacgattgccaaa-tcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaa 335  Q
     ||  |||   |||||||||||| ||||||| ||  | | ||||||||||||||||||| |||||||||||||| ||||    
T  22025 ggcacctcgaaatcgtgtcacga-tgccaaattcatgtcccgatttctctgttcttccagaccacaaatttgaaaccaa 21948  T

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Target: scaffold0565 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 159 - 336
Target Start/End: Original strand, 3001 - 3178
Alignment:
Q  159 gaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcac 258  Q
    |||||||||||||||   ||| ||||| |||||||||||| |||||| ||||||||||||  |||||||||||||||     || |||| | | ||||||    
T  3001 gaccagtccttatcaagaatacttaacgagcaagtttctggatcgtgtcacgatttcccacaatcgtgccacgatttgcacccctgcaaccctagctcac 3100  T
Q  259 tgcctctccgatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaat 336  Q
     || ||    |||||||||||||  | |||||| | ||||||||| ||||||||||| ||||||||||||||| ||||    
T  3101 ggcatccgaaatcgtgtcacgatcccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat 3178  T

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Target: scaffold1455 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold1455
Description:

Target: scaffold1455; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 269 - 336
Target Start/End: Complemental strand, 1783 - 1716
Alignment:
Q  269 atcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaat 336  Q
    |||||||||||||| | |||||| | ||||||||||||||||||||| ||||||||||||||||||||    
T  1783 atcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 1716  T

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Target: scaffold0188 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 159 - 335
Target Start/End: Complemental strand, 17616 - 17440
Alignment:
Q  159 gaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcac 258  Q
    ||||| |||||||||  |||| ||||| |||||||||   |||| || |||||||||||||||||||| |||||||| ||  || ||||||  | |||||    
T  17616 gaccaatccttatcaaggatacttaacgagcaagtttgaaaatcatgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccag-ctcac 17518  T
Q  259 tgcctctccga-tcgtgtcacgattgccaaat-cgcgacacgatttctctgttcttccaaaccacaaatttgaagccaa 335  Q
     || || |  | |||||||||||| ||||||| || | ||||||||||||||||||||| |||||||||||||||||||    
T  17517 ggcatcacgaaatcgtgtcacgat-gccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 17440  T

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Target: scaffold0137 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 159 - 336
Target Start/End: Complemental strand, 6044 - 5866
Alignment:
Q  159 gaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttc-ccaagatcgtgccacgattttgcttccagcaaacttggctca 257  Q
    |||||||||||||||  |||| ||||| ||||||||||   |||||| ||||||||  |||  |||||| ||||| |||||  || |||| | | |||||    
T  6044 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttgccacaatcgtgacacgaatttgcaccctgcaaccctagctca 5945  T
Q  258 ctgcctctccgatcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaat 336  Q
    | ||  |||| |||||||||||| | | |||||| | ||||||||| ||||||||||| ||||||||||||||| ||||    
T  5944 cggcacctccaatcgtgtcacgactccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaat 5866  T

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Target: scaffold0087 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 2)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 298 - 344
Target Start/End: Complemental strand, 36370 - 36324
Alignment:
Q  298 gatttctctgttcttccaaaccacaaatttgaagccaatattcaaca 344  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||    
T  36370 gatttctctgttcttccaaaccacaaatttgaagccaattttcaaca 36324  T

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Target: scaffold0087; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 269 - 335
Target Start/End: Complemental strand, 43509 - 43443
Alignment:
Q  269 atcgtgtcacgattgcca-aatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaa 335  Q
    ||||||||||||| |||| ||||| | |||||||||||| ||||||||||||| ||||||||||||||    
T  43509 atcgtgtcacgat-gccacaatcgtgtcacgatttctctattcttccaaaccataaatttgaagccaa 43443  T

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Target: scaffold0006 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 4)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 286 - 336
Target Start/End: Original strand, 6252 - 6302
Alignment:
Q  286 aaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaat 336  Q
    |||||| | ||||||||||||||||||||||||||||||||||||||||||    
T  6252 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 6302  T

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Target: scaffold0006; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 298 - 336
Target Start/End: Original strand, 3072 - 3110
Alignment:
Q  298 gatttctctgttcttccaaaccacaaatttgaagccaat 336  Q
    |||||||||||||||||||||||||||||||||||||||    
T  3072 gatttctctgttcttccaaaccacaaatttgaagccaat 3110  T

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Target: scaffold0006; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 295 - 331
Target Start/End: Complemental strand, 132801 - 132765
Alignment:
Q  295 cacgatttctctgttcttccaaaccacaaatttgaag 331  Q
    |||||||||||||||||||||||||||||||||||||    
T  132801 cacgatttctctgttcttccaaaccacaaatttgaag 132765  T

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Target: scaffold0006; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 295 - 338
Target Start/End: Original strand, 149610 - 149653
Alignment:
Q  295 cacgatttctctgttcttccaaaccacaaatttgaagccaatat 338  Q
    |||||||||||||||  |||||||||||||||||||||||||||    
T  149610 cacgatttctctgtttctccaaaccacaaatttgaagccaatat 149653  T

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Target: scaffold0098 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 295 - 335
Target Start/End: Original strand, 45755 - 45795
Alignment:
Q  295 cacgatttctctgttcttccaaaccacaaatttgaagccaa 335  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  45755 cacgatttctctgttcttccaaaccacaaatttgaagccaa 45795  T

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Target: scaffold0491 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 269 - 335
Target Start/End: Original strand, 9233 - 9299
Alignment:
Q  269 atcgtgtcacgattgccaaa-tcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaa 335  Q
    |||||||||||| ||||||| ||| | ||||||||||||||||||||| |||||||||||||||||||    
T  9233 atcgtgtcacga-tgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 9299  T

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Target: scaffold0491; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 159 - 335
Target Start/End: Original strand, 11569 - 11744
Alignment:
Q  159 gaccagtccttatcagagatagttaaccagcaagtttctgaatcgtgacacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcac 258  Q
    |||||||||||||||  || | ||||| |||||||||   ||||||| ||||||||||||| |||||| |||||||| ||  || ||||||  | |||||    
T  11569 gaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccaa-atcgtgtcacgatttggcaccctgcaaaccag-ctcac 11666  T
Q  259 tgcctc-tccgatcgtgtcacgattgccaaa-tcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaa 335  Q
     || || |   |||||||||||| ||||||| ||| | ||||||||||||||||||||| ||||||| |||||||||||    
T  11667 ggcatcatgaaatcgtgtcacga-tgccaaattcgtgtcacgatttctctgttcttccagaccacaattttgaagccaa 11744  T

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Target: scaffold0510 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0510
Description:

Target: scaffold0510; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 269 - 344
Target Start/End: Complemental strand, 1158 - 1083
Alignment:
Q  269 atcgtgtcacgattgccaaatcgcgacacgatttctctgttcttccaaaccacaaatttgaagccaatattcaaca 344  Q
    |||||||||||||  | |||||| | |||||||| ||||||||| |||||||||||||||||| |||  |||||||    
T  1158 atcgtgtcacgatgccaaaatcgtgtcacgatttttctgttctttcaaaccacaaatttgaaggcaaatttcaaca 1083  T

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Target: scaffold0140 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 269 - 335
Target Start/End: Complemental strand, 7986 - 7920
Alignment:
Q  269 atcgtgtcacgattgccaaat-cgcgacacgatttctctgttcttccaaaccacaaatttgaagccaa 335  Q
    ||||||||||||| ||||||| || | |||||||||||||||||| || |||||||||||||||||||    
T  7986 atcgtgtcacgat-gccaaattcgtgtcacgatttctctgttctttcagaccacaaatttgaagccaa 7920  T

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Target: scaffold0036 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 286 - 344
Target Start/End: Original strand, 86153 - 86212
Alignment:
Q  286 aaatcgcgacacgatttctctgttcttccaaaccac-aaatttgaagccaatattcaaca 344  Q
    |||||| | |||||||||||| |||||||||||||| ||||||||||||||||| |||||    
T  86153 aaatcgtgtcacgatttctctattcttccaaaccacaaaatttgaagccaatatacaaca 86212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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