View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15949_low_1 (Length: 380)

Name: NF15949_low_1
Description: NF15949
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15949_low_1
NF15949_low_1
[»] scaffold0290 (2 HSPs)
scaffold0290 (15-364)||(8404-8753)
scaffold0290 (266-364)||(9471-9569)
[»] chr6 (30 HSPs)
chr6 (15-364)||(34083083-34083431)
chr6 (265-364)||(22299895-22299994)
chr6 (128-364)||(18773679-18773915)
chr6 (266-364)||(9927631-9927728)
chr6 (266-364)||(31738388-31738486)
chr6 (266-364)||(33802010-33802108)
chr6 (272-364)||(8411111-8411203)
chr6 (265-364)||(8412308-8412407)
chr6 (218-364)||(27438815-27438961)
chr6 (251-364)||(31740250-31740363)
chr6 (260-364)||(33807714-33807818)
chr6 (282-364)||(5311304-5311386)
chr6 (266-357)||(18139480-18139571)
chr6 (273-363)||(293640-293730)
chr6 (266-364)||(27440168-27440266)
chr6 (287-364)||(34084148-34084223)
chr6 (266-349)||(14328767-14328850)
chr6 (266-349)||(14421777-14421860)
chr6 (268-364)||(19368513-19368609)
chr6 (272-355)||(19367751-19367834)
chr6 (186-277)||(29675589-29675680)
chr6 (314-364)||(8447246-8447296)
chr6 (314-364)||(8456050-8456100)
chr6 (260-297)||(9928568-9928605)
chr6 (312-349)||(13173077-13173114)
chr6 (314-355)||(28225458-28225499)
chr6 (268-364)||(2138632-2138728)
chr6 (308-364)||(17916504-17916560)
chr6 (308-364)||(21749701-21749757)
chr6 (314-354)||(25138834-25138874)
[»] chr2 (57 HSPs)
chr2 (15-254)||(23178577-23178816)
chr2 (15-254)||(23589834-23590073)
chr2 (206-364)||(23178815-23178973)
chr2 (206-364)||(23590072-23590230)
chr2 (61-364)||(6706951-6707258)
chr2 (219-324)||(40174711-40174815)
chr2 (141-364)||(37867781-37868004)
chr2 (266-362)||(12852913-12853009)
chr2 (251-364)||(21012058-21012171)
chr2 (266-364)||(23177698-23177797)
chr2 (266-364)||(23588955-23589054)
chr2 (265-349)||(15650481-15650565)
chr2 (265-364)||(2581828-2581927)
chr2 (222-349)||(3533575-3533702)
chr2 (270-364)||(4829490-4829584)
chr2 (141-364)||(10368253-10368476)
chr2 (265-364)||(2583538-2583637)
chr2 (265-364)||(42028950-42029049)
chr2 (210-364)||(12958441-12958595)
chr2 (266-353)||(14509245-14509332)
chr2 (126-289)||(14716047-14716211)
chr2 (207-289)||(26205981-26206063)
chr2 (197-289)||(4830599-4830691)
chr2 (308-364)||(35799537-35799593)
chr2 (265-364)||(6209057-6209155)
chr2 (273-364)||(7036991-7037082)
chr2 (266-349)||(7490188-7490271)
chr2 (233-292)||(8538584-8538643)
chr2 (126-172)||(40174616-40174662)
chr2 (186-239)||(12854042-12854095)
chr2 (223-364)||(7038290-7038423)
chr2 (312-364)||(22900219-22900271)
chr2 (61-104)||(12853906-12853949)
chr2 (302-364)||(12854133-12854195)
chr2 (199-349)||(42596600-42596750)
chr2 (268-364)||(2305565-2305661)
chr2 (320-364)||(4701534-4701578)
chr2 (308-364)||(42368343-42368399)
chr2 (265-340)||(1624968-1625043)
chr2 (312-355)||(4630123-4630166)
chr2 (314-365)||(21541085-21541136)
chr2 (269-364)||(29424608-29424703)
chr2 (321-364)||(30202931-30202974)
chr2 (218-280)||(4513698-4513760)
chr2 (314-364)||(17179292-17179342)
chr2 (314-364)||(21545110-21545160)
chr2 (314-364)||(22653068-22653118)
chr2 (314-364)||(33836794-33836844)
chr2 (314-364)||(38801239-38801289)
chr2 (314-364)||(41795993-41796043)
chr2 (265-363)||(42246617-42246715)
chr2 (266-339)||(8537062-8537135)
chr2 (266-339)||(15850652-15850725)
chr2 (314-362)||(2306702-2306750)
chr2 (194-270)||(2717699-2717775)
chr2 (312-364)||(3255917-3255969)
chr2 (308-364)||(43015564-43015620)
[»] chr7 (66 HSPs)
chr7 (69-364)||(14206698-14206999)
chr7 (69-364)||(14215388-14215689)
chr7 (128-364)||(13446514-13446749)
chr7 (126-356)||(43931719-43931949)
chr7 (197-364)||(14107857-14108024)
chr7 (197-364)||(14417814-14417981)
chr7 (265-364)||(19279604-19279703)
chr7 (251-364)||(4858322-4858435)
chr7 (224-364)||(24873548-24873688)
chr7 (265-364)||(43936132-43936231)
chr7 (266-364)||(4857226-4857324)
chr7 (219-355)||(25532179-25532314)
chr7 (213-356)||(25153691-25153834)
chr7 (266-364)||(38406043-38406141)
chr7 (198-364)||(41515022-41515187)
chr7 (266-364)||(43930344-43930442)
chr7 (251-364)||(40926497-40926610)
chr7 (264-364)||(43006410-43006510)
chr7 (265-364)||(22746312-22746411)
chr7 (265-364)||(43935210-43935309)
chr7 (266-365)||(46458706-46458805)
chr7 (266-364)||(25154929-25155027)
chr7 (198-364)||(28326315-28326480)
chr7 (266-364)||(40930443-40930541)
chr7 (283-364)||(45719640-45719721)
chr7 (218-349)||(10257333-10257462)
chr7 (265-357)||(22061787-22061879)
chr7 (272-364)||(46674933-46675025)
chr7 (265-364)||(43007641-43007740)
chr7 (271-364)||(19278378-19278471)
chr7 (223-364)||(45721716-45721857)
chr7 (272-364)||(22744771-22744863)
chr7 (272-363)||(35127836-35127927)
chr7 (272-363)||(36702949-36703040)
chr7 (265-364)||(46673515-46673613)
chr7 (265-364)||(47163178-47163277)
chr7 (226-364)||(18802342-18802480)
chr7 (302-364)||(33459572-33459634)
chr7 (314-364)||(38408315-38408365)
chr7 (302-364)||(46457095-46457157)
chr7 (264-349)||(22060503-22060588)
chr7 (275-364)||(36702802-36702891)
chr7 (266-357)||(26406157-26406248)
chr7 (266-349)||(27899207-27899290)
chr7 (302-364)||(17288249-17288311)
chr7 (306-364)||(18801240-18801298)
chr7 (280-349)||(10256163-10256232)
chr7 (265-357)||(7146812-7146903)
chr7 (265-357)||(7148050-7148142)
chr7 (268-364)||(30222671-30222767)
chr7 (268-364)||(33458335-33458430)
chr7 (293-364)||(28325097-28325168)
chr7 (272-355)||(41126273-41126356)
chr7 (314-364)||(1904061-1904111)
chr7 (306-364)||(1970838-1970896)
chr7 (314-356)||(14109110-14109152)
chr7 (314-356)||(14419067-14419109)
chr7 (314-364)||(21171527-21171577)
chr7 (308-362)||(28648317-28648371)
chr7 (314-364)||(30224017-30224067)
chr7 (314-364)||(41616649-41616699)
chr7 (231-289)||(43111528-43111586)
chr7 (314-355)||(1903864-1903905)
chr7 (268-349)||(36673831-36673912)
chr7 (308-364)||(41516379-41516435)
chr7 (308-364)||(47809621-47809677)
[»] chr1 (60 HSPs)
chr1 (61-364)||(26054922-26055231)
chr1 (186-361)||(9592266-9592441)
chr1 (202-364)||(49139826-49139988)
chr1 (265-364)||(13641282-13641381)
chr1 (225-349)||(36511283-36511407)
chr1 (265-364)||(47411009-47411108)
chr1 (265-364)||(25787156-25787255)
chr1 (266-364)||(26056140-26056238)
chr1 (272-356)||(52181304-52181388)
chr1 (265-364)||(25785993-25786092)
chr1 (265-364)||(47136679-47136778)
chr1 (266-364)||(14071196-14071294)
chr1 (271-364)||(3979311-3979404)
chr1 (220-364)||(50679768-50679912)
chr1 (266-364)||(13930668-13930766)
chr1 (266-364)||(21277019-21277117)
chr1 (219-364)||(13929320-13929465)
chr1 (268-355)||(14390292-14390379)
chr1 (265-364)||(16217465-16217564)
chr1 (265-344)||(16218470-16218549)
chr1 (266-349)||(19466198-19466281)
chr1 (266-364)||(9633800-9633898)
chr1 (195-349)||(14171190-14171344)
chr1 (266-364)||(49141489-49141587)
chr1 (266-356)||(52742969-52743059)
chr1 (251-356)||(47560172-47560277)
chr1 (218-287)||(51217720-51217789)
chr1 (272-364)||(3978069-3978161)
chr1 (266-349)||(14169659-14169742)
chr1 (225-356)||(19464633-19464764)
chr1 (266-349)||(36509851-36509934)
chr1 (265-364)||(47411440-47411539)
chr1 (314-364)||(44977246-44977296)
chr1 (225-290)||(9210073-9210138)
chr1 (266-339)||(51726837-51726910)
chr1 (320-364)||(33793804-33793848)
chr1 (187-287)||(34654254-34654354)
chr1 (272-364)||(48467286-48467377)
chr1 (268-364)||(48935105-48935201)
chr1 (194-349)||(14765016-14765170)
chr1 (223-349)||(40110602-40110728)
chr1 (314-364)||(44979460-44979510)
chr1 (15-60)||(30397493-30397538)
chr1 (263-364)||(52741513-52741614)
chr1 (268-364)||(2237973-2238069)
chr1 (268-364)||(34531688-34531784)
chr1 (308-364)||(47512119-47512175)
chr1 (321-364)||(34653460-34653503)
chr1 (266-349)||(40811235-40811318)
chr1 (314-364)||(2236838-2236888)
chr1 (220-286)||(33941420-33941486)
chr1 (314-364)||(35683080-35683130)
chr1 (314-364)||(48934266-48934316)
chr1 (126-172)||(49140021-49140067)
chr1 (266-319)||(14764299-14764352)
chr1 (308-349)||(32823576-32823617)
chr1 (268-349)||(35684198-35684278)
chr1 (308-356)||(2971732-2971780)
chr1 (308-364)||(27114844-27114900)
chr1 (308-364)||(32824169-32824225)
[»] chr8 (64 HSPs)
chr8 (126-364)||(37274912-37275150)
chr8 (197-364)||(36939957-36940124)
chr8 (141-364)||(29739511-29739734)
chr8 (260-364)||(24068355-24068459)
chr8 (211-339)||(34616179-34616312)
chr8 (219-364)||(35945383-35945528)
chr8 (269-364)||(16363808-16363903)
chr8 (270-364)||(36070203-36070297)
chr8 (207-347)||(13514799-13514939)
chr8 (207-347)||(13604332-13604472)
chr8 (272-364)||(31625383-31625475)
chr8 (209-364)||(19914842-19914997)
chr8 (266-364)||(35943932-35944031)
chr8 (266-364)||(117073-117171)
chr8 (266-364)||(7486102-7486200)
chr8 (266-356)||(13367043-13367133)
chr8 (266-364)||(36756089-36756187)
chr8 (266-364)||(44606164-44606262)
chr8 (272-364)||(31623931-31624023)
chr8 (276-364)||(38591010-38591098)
chr8 (219-292)||(8397204-8397277)
chr8 (220-289)||(16362519-16362588)
chr8 (265-364)||(3237443-3237541)
chr8 (265-364)||(27750613-27750712)
chr8 (266-357)||(39546670-39546761)
chr8 (265-364)||(41867908-41868007)
chr8 (266-364)||(37276236-37276334)
chr8 (302-364)||(37324717-37324779)
chr8 (302-364)||(43386731-43386793)
chr8 (231-364)||(38010-38142)
chr8 (273-362)||(38589847-38589936)
chr8 (265-349)||(43277913-43277997)
chr8 (265-356)||(1570198-1570289)
chr8 (265-364)||(41866919-41867018)
chr8 (314-364)||(10053785-10053835)
chr8 (266-364)||(19913517-19913615)
chr8 (314-364)||(21267189-21267239)
chr8 (282-364)||(24069455-24069537)
chr8 (302-364)||(37323373-37323435)
chr8 (282-364)||(37472428-37472510)
chr8 (197-291)||(40251280-40251374)
chr8 (266-339)||(20308655-20308728)
chr8 (266-339)||(21095288-21095361)
chr8 (303-364)||(39515224-39515285)
chr8 (266-349)||(8095386-8095469)
chr8 (265-364)||(43275775-43275874)
chr8 (314-356)||(10052137-10052179)
chr8 (306-364)||(12281812-12281870)
chr8 (303-349)||(36757260-36757306)
chr8 (207-289)||(39323887-39323969)
chr8 (303-364)||(14820218-14820279)
chr8 (135-289)||(44102049-44102202)
chr8 (126-173)||(34616350-34616397)
chr8 (314-364)||(7561824-7561874)
chr8 (314-364)||(14433647-14433697)
chr8 (138-172)||(35945302-35945336)
chr8 (266-355)||(39196-39285)
chr8 (266-319)||(36938751-36938804)
chr8 (199-292)||(38790179-38790272)
chr8 (272-364)||(4807391-4807483)
chr8 (276-349)||(6843795-6843870)
chr8 (324-364)||(7487438-7487478)
chr8 (269-357)||(36071374-36071462)
chr8 (126-154)||(39324028-39324056)
[»] chr3 (67 HSPs)
chr3 (61-364)||(11220441-11220749)
chr3 (126-356)||(25585686-25585916)
chr3 (126-357)||(32980304-32980536)
chr3 (219-364)||(8372562-8372707)
chr3 (211-346)||(43345362-43345497)
chr3 (267-364)||(19622030-19622127)
chr3 (265-364)||(51825613-51825712)
chr3 (266-364)||(8371245-8371343)
chr3 (266-364)||(11219455-11219553)
chr3 (272-364)||(47808105-47808197)
chr3 (218-364)||(53809438-53809584)
chr3 (207-364)||(17345336-17345492)
chr3 (265-362)||(42632733-42632830)
chr3 (271-364)||(54653964-54654057)
chr3 (272-364)||(41386155-41386247)
chr3 (265-364)||(29536739-29536838)
chr3 (265-364)||(41387425-41387524)
chr3 (266-357)||(47765471-47765561)
chr3 (266-364)||(26798899-26798997)
chr3 (223-349)||(48252973-48253099)
chr3 (302-364)||(51401380-51401442)
chr3 (266-364)||(53808343-53808441)
chr3 (209-364)||(19252938-19253093)
chr3 (273-364)||(43101919-43102010)
chr3 (265-364)||(47855330-47855429)
chr3 (266-364)||(25583139-25583237)
chr3 (270-364)||(42633883-42633977)
chr3 (200-292)||(7921570-7921662)
chr3 (306-364)||(10987686-10987744)
chr3 (198-364)||(47766876-47767041)
chr3 (266-364)||(51400240-51400338)
chr3 (251-364)||(19622897-19623010)
chr3 (265-349)||(2124069-2124153)
chr3 (265-364)||(7820415-7820514)
chr3 (266-349)||(23559859-23559942)
chr3 (273-364)||(49122002-49122093)
chr3 (265-364)||(49334329-49334428)
chr3 (266-356)||(12062377-12062467)
chr3 (266-364)||(17350095-17350193)
chr3 (194-280)||(26797428-26797514)
chr3 (218-324)||(35173212-35173318)
chr3 (314-364)||(39133042-39133092)
chr3 (270-364)||(47806843-47806936)
chr3 (312-364)||(2225063-2225115)
chr3 (284-364)||(13077962-13078042)
chr3 (266-356)||(35174375-35174465)
chr3 (266-356)||(49333016-49333106)
chr3 (268-349)||(53049032-53049113)
chr3 (272-364)||(32974222-32974314)
chr3 (265-349)||(43103288-43103372)
chr3 (272-364)||(53047922-53048014)
chr3 (285-364)||(10986677-10986756)
chr3 (314-364)||(5416223-5416273)
chr3 (314-364)||(5417089-5417139)
chr3 (314-364)||(32973164-32973214)
chr3 (314-364)||(39288480-39288530)
chr3 (314-364)||(48035365-48035415)
chr3 (314-364)||(52293564-52293614)
chr3 (314-364)||(52705349-52705399)
chr3 (314-364)||(53342741-53342791)
chr3 (314-355)||(19579254-19579295)
chr3 (314-355)||(55443591-55443632)
chr3 (223-279)||(7271541-7271597)
chr3 (312-364)||(7583495-7583547)
chr3 (265-297)||(47854579-47854611)
chr3 (308-364)||(51214201-51214257)
chr3 (308-364)||(54109657-54109713)
[»] chr4 (77 HSPs)
chr4 (126-364)||(44304831-44305070)
chr4 (219-364)||(21104256-21104401)
chr4 (198-364)||(46795951-46796117)
chr4 (218-349)||(6139037-6139168)
chr4 (219-364)||(11113767-11113912)
chr4 (264-364)||(33377355-33377455)
chr4 (265-363)||(5688629-5688727)
chr4 (225-347)||(34439612-34439734)
chr4 (266-364)||(35787821-35787919)
chr4 (223-364)||(28103436-28103577)
chr4 (223-364)||(31711117-31711258)
chr4 (219-356)||(52658944-52659081)
chr4 (265-364)||(37559023-37559122)
chr4 (272-364)||(37560298-37560390)
chr4 (265-364)||(33376243-33376342)
chr4 (282-364)||(10403304-10403386)
chr4 (126-292)||(43895471-43895636)
chr4 (213-357)||(27408795-27408939)
chr4 (265-364)||(1273425-1273523)
chr4 (266-357)||(6616204-6616295)
chr4 (266-357)||(11114973-11115064)
chr4 (194-349)||(38417593-38417748)
chr4 (218-349)||(50531701-50531832)
chr4 (266-364)||(86828-86926)
chr4 (266-364)||(30683020-30683118)
chr4 (266-356)||(38370315-38370405)
chr4 (251-364)||(15787480-15787593)
chr4 (219-364)||(39590966-39591111)
chr4 (272-348)||(5687216-5687292)
chr4 (265-364)||(3217601-3217700)
chr4 (265-364)||(26788547-26788646)
chr4 (265-364)||(29686281-29686380)
chr4 (198-349)||(38553969-38554120)
chr4 (266-357)||(47668590-47668681)
chr4 (265-364)||(55953844-55953943)
chr4 (266-364)||(11094551-11094649)
chr4 (198-364)||(47667204-47667369)
chr4 (272-364)||(10403416-10403507)
chr4 (308-364)||(43894130-43894186)
chr4 (266-345)||(34438450-34438529)
chr4 (266-357)||(39592282-39592373)
chr4 (265-364)||(40146615-40146714)
chr4 (265-356)||(44128326-44128417)
chr4 (266-364)||(15446663-15446761)
chr4 (223-365)||(29665524-29665665)
chr4 (262-364)||(56297668-56297770)
chr4 (223-340)||(307755-307872)
chr4 (223-292)||(43418130-43418199)
chr4 (251-364)||(52981128-52981241)
chr4 (308-364)||(15786977-15787033)
chr4 (240-364)||(35789557-35789681)
chr4 (314-357)||(96722-96765)
chr4 (301-364)||(26376354-26376417)
chr4 (218-357)||(38371750-38371889)
chr4 (301-364)||(40143679-40143742)
chr4 (282-364)||(55952850-55952932)
chr4 (218-287)||(2292252-2292321)
chr4 (266-339)||(17319092-17319165)
chr4 (268-364)||(526714-526810)
chr4 (266-326)||(6140353-6140413)
chr4 (312-364)||(15445461-15445513)
chr4 (268-364)||(29833397-29833493)
chr4 (198-349)||(3528230-3528381)
chr4 (194-253)||(20827442-20827501)
chr4 (285-364)||(29663668-29663746)
chr4 (266-349)||(50530543-50530626)
chr4 (314-364)||(306602-306652)
chr4 (314-364)||(12396915-12396965)
chr4 (314-364)||(26428681-26428731)
chr4 (314-364)||(28370682-28370732)
chr4 (266-324)||(38419010-38419068)
chr4 (266-364)||(38555269-38555367)
chr4 (314-364)||(39135551-39135601)
chr4 (314-364)||(46794865-46794915)
chr4 (282-364)||(56000312-56000394)
chr4 (314-355)||(2310823-2310864)
chr4 (308-364)||(26202421-26202477)
[»] scaffold0051 (2 HSPs)
scaffold0051 (126-364)||(22153-22385)
scaffold0051 (302-364)||(39930-39992)
[»] chr5 (60 HSPs)
chr5 (211-364)||(5384284-5384437)
chr5 (219-364)||(1273114-1273259)
chr5 (219-364)||(12936048-12936193)
chr5 (219-364)||(19524008-19524152)
chr5 (220-364)||(18695594-18695738)
chr5 (218-349)||(15857563-15857694)
chr5 (219-356)||(22812332-22812470)
chr5 (219-364)||(12950206-12950351)
chr5 (219-364)||(19827086-19827231)
chr5 (223-349)||(5975796-5975922)
chr5 (266-364)||(40058043-40058141)
chr5 (283-364)||(27894033-27894114)
chr5 (231-357)||(224548-224674)
chr5 (266-364)||(5382967-5383065)
chr5 (282-364)||(18678001-18678083)
chr5 (266-364)||(19525281-19525379)
chr5 (266-356)||(42510147-42510237)
chr5 (218-355)||(38473500-38473637)
chr5 (265-364)||(15613530-15613629)
chr5 (194-286)||(8188121-8188213)
chr5 (268-364)||(15614955-15615051)
chr5 (272-364)||(26403332-26403424)
chr5 (265-364)||(10085837-10085936)
chr5 (225-356)||(42511618-42511749)
chr5 (218-319)||(32735424-32735525)
chr5 (272-364)||(1663212-1663304)
chr5 (273-364)||(12933776-12933867)
chr5 (273-364)||(42979473-42979564)
chr5 (282-364)||(326369-326451)
chr5 (314-364)||(6629756-6629806)
chr5 (302-364)||(21387662-21387724)
chr5 (266-356)||(32734165-32734254)
chr5 (220-364)||(21389090-21389232)
chr5 (272-356)||(8762399-8762483)
chr5 (223-279)||(10978226-10978282)
chr5 (266-349)||(12830931-12831014)
chr5 (266-349)||(12862911-12862994)
chr5 (273-364)||(12947937-12948028)
chr5 (266-349)||(18693738-18693821)
chr5 (265-364)||(40059320-40059419)
chr5 (265-364)||(42980701-42980800)
chr5 (314-364)||(19050774-19050824)
chr5 (314-364)||(41905200-41905250)
chr5 (199-292)||(14212117-14212210)
chr5 (266-319)||(22819510-22819563)
chr5 (268-364)||(4566976-4567072)
chr5 (272-364)||(4567973-4568065)
chr5 (272-319)||(10084668-10084715)
chr5 (126-173)||(15857481-15857528)
chr5 (314-364)||(641921-641971)
chr5 (306-364)||(7345423-7345481)
chr5 (314-364)||(15154108-15154158)
chr5 (314-364)||(22650669-22650719)
chr5 (314-364)||(32411989-32412039)
chr5 (272-349)||(15509235-15509312)
chr5 (272-349)||(26404209-26404286)
chr5 (125-173)||(1273305-1273353)
chr5 (316-364)||(1273383-1273431)
chr5 (136-172)||(22812249-22812285)
chr5 (308-364)||(37371218-37371274)
[»] scaffold0046 (2 HSPs)
scaffold0046 (126-364)||(24669-24906)
scaffold0046 (302-364)||(23431-23493)
[»] scaffold1974 (1 HSPs)
scaffold1974 (266-364)||(621-719)
[»] scaffold1878 (1 HSPs)
scaffold1878 (266-364)||(555-653)
[»] scaffold2127 (1 HSPs)
scaffold2127 (265-364)||(507-606)
[»] scaffold0013 (2 HSPs)
scaffold0013 (213-356)||(96193-96336)
scaffold0013 (314-364)||(96856-96906)
[»] scaffold0178 (1 HSPs)
scaffold0178 (265-364)||(2257-2356)
[»] scaffold0024 (1 HSPs)
scaffold0024 (265-364)||(72978-73077)
[»] scaffold0003 (2 HSPs)
scaffold0003 (218-364)||(48401-48547)
scaffold0003 (266-364)||(47095-47193)
[»] scaffold0084 (2 HSPs)
scaffold0084 (126-292)||(11803-11968)
scaffold0084 (302-364)||(13233-13295)
[»] scaffold0007 (1 HSPs)
scaffold0007 (272-364)||(145868-145960)
[»] scaffold0369 (1 HSPs)
scaffold0369 (269-364)||(12935-13030)
[»] scaffold0098 (1 HSPs)
scaffold0098 (219-349)||(42292-42422)
[»] scaffold0025 (2 HSPs)
scaffold0025 (222-362)||(54618-54758)
scaffold0025 (302-364)||(56729-56791)
[»] scaffold0045 (1 HSPs)
scaffold0045 (272-364)||(77180-77272)
[»] scaffold0177 (1 HSPs)
scaffold0177 (268-364)||(1780-1876)
[»] scaffold0038 (1 HSPs)
scaffold0038 (314-355)||(25956-25997)
[»] scaffold0155 (1 HSPs)
scaffold0155 (313-349)||(5209-5245)


Alignment Details
Target: scaffold0290 (Bit Score: 297; Significance: 1e-167; HSPs: 2)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 297; E-Value: 1e-167
Query Start/End: Original strand, 15 - 364
Target Start/End: Complemental strand, 8753 - 8404
Alignment:
Q  15 atgaaggcaaagaagagggatgaagatggtaataatgatggaaatgtatgcccatttgtaatgttggtttaattatttaataaaatgttccttttataaa 114  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8753 atgaaggcaaagaagagggatgaagatggtaataacgatggaaatgtatgcccatttgtaatgttggtttaattatttaataaaatgttccttttataaa 8654  T
Q  115 aataaaatccttgaattttgtatgaatatgaagaagtggtggacggaataagatgaagagagggnnnnnnnttatgtggtgatggttcactattgtatat 214  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||       |||||||||||||||||||||||||||||    
T  8653 aataaaatccttgaattttgtatgaatatgaagaagtggtggaaggaataagatgaagagagggaaaaaaattatgtggtgatggttcactattgtatat 8554  T
Q  215 aacagacctgcaatcgaatggttgaaattatatcagaaatgttacacattaaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgag 314  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||||||| |    
T  8553 aacggacctgcaatcgaatggttgaaattatatcagaaatgttacacattaaaaaactaacggagatgaccgaaatagtaaatgactgaagatttatggg 8454  T
Q  315 accaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  8453 accaatttgagacagtttatagttaggggagcaaagtgaaaaccaaaaat 8404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290; HSP #2
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 266 - 364
Target Start/End: Original strand, 9471 - 9569
Alignment:
Q  266 aaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    ||||||||||||||||||||||||| ||||||  | ||||||||||| ||| || |||||||| |||||||||||||||||||||||| ||| ||||||    
T  9471 aaaaactaacggagatgaccaaaatggtaaacggcagaagatttatgggactaaattgagacactttatagttaggggaccaaagtgataacaaaaaat 9569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 249; Significance: 1e-138; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 15 - 364
Target Start/End: Complemental strand, 34083431 - 34083083
Alignment:
Q  15 atgaaggcaaagaagagggatgaagatggtaataatgatggaaatgtatgcccatttgtaatgttggtttaattatttaataaaatgttccttttataaa 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34083431 atgaaggcaaagaagagggatgaagatggtaataatgatggaaatgtatgcccatttgtaatgttggtttaattatttaataaaatgttccttttataaa 34083332  T
Q  115 aataaaatccttgaattttgtatgaatatgaagaagtggtggacggaataagatgaagagagggnnnnnnnttatgtggtgatggttcactattgtatat 214  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||       |||||||||||||||||||||||||||||    
T  34083331 aataaaatccttgaattttgtatgaatatgaagaagtggtgtacggaagaagatgaagagaggg-aaaaaattatgtggtgatggttcactattgtatat 34083233  T
Q  215 aacagacctgcaatcgaatggttgaaattatatcagaaatgttacacattaaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgag 314  Q
    ||  |||||||||||||||||||||||||||||||||||||||||||||| | |||||||| || | || ||||||||||||| |||||| |||||||||    
T  34083232 aatggacctgcaatcgaatggttgaaattatatcagaaatgttacacatt-agaaactaacagaaaggatcaaaatagtaaacgactgaaaatttatgag 34083134  T
Q  315 a-ccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    | | |||||||||||||||||| ||||| ||||||||||||||| ||||||    
T  34083133 atcaaatttgagacagtttataattaggagaccaaagtgaaaactaaaaat 34083083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 265 - 364
Target Start/End: Original strand, 22299895 - 22299994
Alignment:
Q  265 aaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||||| ||||||||||||||||||||||||||  | ||||||||||| |||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  22299895 aaaaaaataacggagatgaccaaaatagtaaacggcagaagatttatgggaccaaattgagacactttatagttaggggaccaaagtgaaaaccaaaaat 22299994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 128 - 364
Target Start/End: Complemental strand, 18773915 - 18773679
Alignment:
Q  128 aattttgtatgaatatgaagaagtggtggacggaataagatgaagagagggnnnnnnnttatgtggtgatggttcactattgtatataacagacctgcaa 227  Q
    ||||||||||||||||||||||||| |||| |||| |||||||||| ||||        |  ||| || ||||||| | ||||||| || |||| |||||    
T  18773915 aattttgtatgaatatgaagaagtgatggaaggaagaagatgaagaaagggaaaaaaacttggtgttggtggttcattgttgtatacaatagacatgcaa 18773816  T
Q  228 tcgaatggttgaaattatatcagaaatgttacacattaaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagac 327  Q
    |||||||||| |||| |||||| |||  | | |||||||||||||||| |||| |||||||| ||  ||||   || ||  || | |||||| |||||||    
T  18773815 tcgaatggttaaaatcatatcaaaaacatcagacattaaaaaactaacagagaggaccaaaaaaggtaacacgagaggacataagggaccaaattgagac 18773716  T
Q  328 agtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    | |||||| ||||||||||||| ||||| ||||||||    
T  18773715 attttataattaggggaccaaaatgaaatccaaaaat 18773679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 266 - 364
Target Start/End: Complemental strand, 9927728 - 9927631
Alignment:
Q  266 aaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    ||||| |||||||||||||||||||||||||| | ||||| |||||| |||||| |||||||| |||||||||||||||||||| | ||||| ||||||    
T  9927728 aaaaattaacggagatgaccaaaatagtaaacgattgaag-tttatgggaccaaattgagacactttatagttaggggaccaaactaaaaacaaaaaat 9927631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 266 - 364
Target Start/End: Complemental strand, 31738486 - 31738388
Alignment:
Q  266 aaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    ||||||||||||||| ||||||||| ||||||  | ||||| ||||| |||||| |||| ||| |||||||||||||||||||| ||||||||||||||    
T  31738486 aaaaactaacggagaggaccaaaatggtaaaccgcagaagacttatgggaccaaattgaaacactttatagttaggggaccaaattgaaaaccaaaaat 31738388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 266 - 364
Target Start/End: Original strand, 33802010 - 33802108
Alignment:
Q  266 aaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    ||||||||||||||| |||||| |  |||||| || ||||||||||| || ||| || ||||| |||||||||||||||||||||||||||||||||||    
T  33802010 aaaaactaacggagaggaccaatacggtaaactacagaagatttatgggatcaaattaagacactttatagttaggggaccaaagtgaaaaccaaaaat 33802108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 272 - 364
Target Start/End: Complemental strand, 8411203 - 8411111
Alignment:
Q  272 taacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    ||||||||| ||||||||||||||||  |  ||||||||| ||||||| |||||||| |||||||||||||||| ||| ||||||||||||||    
T  8411203 taacggagaggaccaaaatagtaaacggcataagatttataagaccaaattgagacactttatagttaggggactaaattgaaaaccaaaaat 8411111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 265 - 364
Target Start/End: Original strand, 8412308 - 8412407
Alignment:
Q  265 aaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||| ||||||||||| ||||||||||||||||  |  |||||||||| |||||| |||||||| |||||||||||||||| ||| ||||||| ||||||    
T  8412308 aaaatactaacggagaggaccaaaatagtaaacggcacaagatttatgggaccaaattgagacactttatagttaggggactaaattgaaaacaaaaaat 8412407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 218 - 364
Target Start/End: Complemental strand, 27438961 - 27438815
Alignment:
Q  218 agacctgcaatcgaatggttgaaattatatcagaaatgttacacattaaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagacc 317  Q
    |||||||||||| | ||||| |||||||||||  |||  || |  |||||||| |||||||||||||||||| |||||||  | ||| ||||||| || |    
T  27438961 agacctgcaatcaagtggttaaaattatatcaagaataatatattttaaaaaattaacggagatgaccaaaagagtaaacggcagaatatttatgggatc 27438862  T
Q  318 aatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    || |||||||| ||||||||||  |||||||| ||||| ||||||||    
T  27438861 aaattgagacactttatagttaaaggaccaaaatgaaatccaaaaat 27438815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 251 - 364
Target Start/End: Original strand, 31740250 - 31740363
Alignment:
Q  251 aaatgttacacattaaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaag 350  Q
    |||| ||| |||||||||||| |||||| | ||||||||| ||||||  |  |||||||||| |||||| |||||||| |||||||||| |||||||||     
T  31740250 aaatattagacattaaaaaacaaacggataggaccaaaatggtaaacggcataagatttatgggaccaaattgagacactttatagttaagggaccaaat 31740349  T
Q  351 tgaaaaccaaaaat 364  Q
    ||||||| ||||||    
T  31740350 tgaaaacaaaaaat 31740363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 260 - 364
Target Start/End: Complemental strand, 33807818 - 33807714
Alignment:
Q  260 acattaaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaacca 359  Q
    ||||||||||| ||||||||| ||||||||  ||||||  | ||| |||||||  | ||| |||||||| |||||||||| |||||||||||||||||||    
T  33807818 acattaaaaaattaacggagaggaccaaaacggtaaacggcagaaaatttatggcatcaaattgagacactttatagttaagggaccaaagtgaaaacca 33807719  T
Q  360 aaaat 364  Q
    |||||    
T  33807718 aaaat 33807714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 282 - 364
Target Start/End: Complemental strand, 5311386 - 5311304
Alignment:
Q  282 gaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||||||||||||||| ||  |||||||||  |||||| |||||||| |||||||||||||||| ||| ||||||||||||||    
T  5311386 gaccaaaatagtaaacgacataagatttataggaccaaattgagacactttatagttaggggactaaattgaaaaccaaaaat 5311304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 266 - 357
Target Start/End: Original strand, 18139480 - 18139571
Alignment:
Q  266 aaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaac 357  Q
    ||||||||| ||||| |||||||| | |||||  | |||||| || | ||||||||||||||| ||||||||||| ||| ||||||||||||    
T  18139480 aaaaactaatggagaggaccaaaacaataaacggcagaagatataagggaccaatttgagacactttatagttagaggatcaaagtgaaaac 18139571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 273 - 363
Target Start/End: Original strand, 293640 - 293730
Alignment:
Q  273 aacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaa 363  Q
    |||||||| ||||||||| |||||| || ||||| |||||||||||| |||| ||| |||||| ||||| || |||| ||||||| |||||    
T  293640 aacggagaggaccaaaatggtaaacgacagaagacttatgagaccaaattgaaacactttataattaggagatcaaattgaaaacaaaaaa 293730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 266 - 364
Target Start/End: Original strand, 27440168 - 27440266
Alignment:
Q  266 aaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    ||||| ||||||||| ||||||||||||||||    ||||||||||| |||||| |||||||| |||| ||||| |||| |||| |||||  |||||||    
T  27440168 aaaaattaacggagaggaccaaaatagtaaacggaagaagatttatgggaccaaattgagacaatttaaagttaagggatcaaaatgaaattcaaaaat 27440266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 287 - 364
Target Start/End: Original strand, 34084148 - 34084223
Alignment:
Q  287 aaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||| |||||| || |||||||||||||||||| |||||||| |||||| |||  |||||||||||||||||| ||||    
T  34084148 aaatggtaaacgacagaagatttatgagaccaaattgagacactttatattta--ggaccaaagtgaaaaccagaaat 34084223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 266 - 349
Target Start/End: Original strand, 14328767 - 14328850
Alignment:
Q  266 aaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaa 349  Q
    ||||| ||||||||| |||||||||||||||| ||  |||| |||||||||||| || ||||| || ||||||| |||| ||||    
T  14328767 aaaaagtaacggagaggaccaaaatagtaaacgacaaaagaattatgagaccaaattaagacacttaatagttaagggatcaaa 14328850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 266 - 349
Target Start/End: Original strand, 14421777 - 14421860
Alignment:
Q  266 aaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaa 349  Q
    ||||| ||||||||| |||||||||||||||| ||  |||| |||||||||||| || ||||| || ||||||| |||| ||||    
T  14421777 aaaaagtaacggagaggaccaaaatagtaaacgacaaaagaattatgagaccaaattaagacacttaatagttaagggatcaaa 14421860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 268 - 364
Target Start/End: Original strand, 19368513 - 19368609
Alignment:
Q  268 aaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    ||||||||||||| ||| |||| ||  ||| || |||||  || |||||||| |||||||| ||||||||||| |||||||| ||||| || |||||    
T  19368513 aaactaacggagaggactaaaagaggtaacgacagaagacataagagaccaaattgagacactttatagttagaggaccaaaatgaaatccgaaaat 19368609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 272 - 355
Target Start/End: Complemental strand, 19367834 - 19367751
Alignment:
Q  272 taacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaa 355  Q
    ||||||| |||||||||| ||  ||||||  ||||  || | |||||| |||||||| |||||||||||||||||||| |||||    
T  19367834 taacggatatgaccaaaaaaggtaacaacaaaagacataagggaccaaattgagacactttatagttaggggaccaaaatgaaa 19367751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 186 - 277
Target Start/End: Complemental strand, 29675680 - 29675589
Alignment:
Q  186 ttatgtggtgatggttcactattgtatataacagacctgcaatcgaatggttgaaattatatcagaaatgttacacattaaaaaactaacgg 277  Q
    ||||||||||||||| |||||||  ||| ||  ||||||||||| | ||||| |||| | |||| | || ||| ||||||||||||||||||    
T  29675680 ttatgtggtgatggtgcactattagatacaatggacctgcaatccagtggttaaaatcacatcatacatattatacattaaaaaactaacgg 29675589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 314 - 364
Target Start/End: Complemental strand, 8447296 - 8447246
Alignment:
Q  314 gaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||||| |||||||| |||||||||||||||||||| ||||| || |||||    
T  8447296 gaccaaattgagacactttatagttaggggaccaaaatgaaatccgaaaat 8447246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 314 - 364
Target Start/End: Complemental strand, 8456100 - 8456050
Alignment:
Q  314 gaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||||| |||||||| |||||||||||||||||||| ||||| || |||||    
T  8456100 gaccaaattgagacactttatagttaggggaccaaaatgaaatccgaaaat 8456050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 260 - 297
Target Start/End: Original strand, 9928568 - 9928605
Alignment:
Q  260 acattaaaaaactaacggagatgaccaaaatagtaaac 297  Q
    |||||||| |||||| ||||||||||||||||||||||    
T  9928568 acattaaataactaatggagatgaccaaaatagtaaac 9928605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 312 - 349
Target Start/End: Complemental strand, 13173114 - 13173077
Alignment:
Q  312 gagaccaatttgagacagtttatagttaggggaccaaa 349  Q
    |||||||| |||||||| ||||||||||||||||||||    
T  13173114 gagaccaaattgagacactttatagttaggggaccaaa 13173077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 314 - 355
Target Start/End: Complemental strand, 28225499 - 28225458
Alignment:
Q  314 gaccaatttgagacagtttatagttaggggaccaaagtgaaa 355  Q
    |||||| |||||||| |||||||||||||||||||| |||||    
T  28225499 gaccaaattgagacactttatagttaggggaccaaaatgaaa 28225458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 268 - 364
Target Start/End: Original strand, 2138632 - 2138728
Alignment:
Q  268 aaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||||||| |||| |||||||| ||  ||| || |||||  || | ||| || |||||||| |||||||||||||||||||| | ||| ||||||||    
T  2138632 aaactaacagagaggaccaaaagaggtaacgacagaagacataagggactaaattgagacactttatagttaggggaccaaaataaaatccaaaaat 2138728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 364
Target Start/End: Original strand, 17916504 - 17916560
Alignment:
Q  308 ttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    ||||| |||||| ||||||||||||| ||||| ||||||||| |||||  |||||||    
T  17916504 ttatgtgaccaaattgagacagtttaaagttaagggaccaaaatgaaattcaaaaat 17916560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 364
Target Start/End: Complemental strand, 21749757 - 21749701
Alignment:
Q  308 ttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||||||||||| ||||||| ||||| ||||| ||||||||| |||||  |||||||    
T  21749757 ttatgagaccaaattgagacggtttaaagttaagggaccaaaatgaaattcaaaaat 21749701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 314 - 354
Target Start/End: Complemental strand, 25138874 - 25138834
Alignment:
Q  314 gaccaatttgagacagtttatagttaggggaccaaagtgaa 354  Q
    |||||||||||||||||||| | ||||||||||||| ||||    
T  25138874 gaccaatttgagacagtttaaaattaggggaccaaattgaa 25138834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 195; Significance: 1e-106; HSPs: 57)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 15 - 254
Target Start/End: Original strand, 23178577 - 23178816
Alignment:
Q  15 atgaaggcaaagaagagggatgaagatggtaataatgatggaaatgtatgcccatttgtaatgttggtttaattatttaataaaatgttccttttataaa 114  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  23178577 atgaaggcaaagaagagggatgaagattgtaataatgatggaaatgtatgcccatttgtaatgttggtttaattatttaataaaatgtttcttttataaa 23178676  T
Q  115 aataaaatccttgaattttgtatgaatatgaagaagtggtggacggaataagatgaagagagggnnnnnnnttatgtggtgatggttcactattgtatat 214  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||       ||| ||||||||||||||||||| |||||    
T  23178677 aataaaatccttgaattttgtatgaatatgaagaagtggtggaaggaataagatgaagagagggaaaaaaattaagtggtgatggttcactattctatat 23178776  T
Q  215 aacagacctgcaatcgaatggttgaaattatatcagaaat 254  Q
    ||| ||||||||||||||||||||||||||||||||||||    
T  23178777 aacggacctgcaatcgaatggttgaaattatatcagaaat 23178816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 15 - 254
Target Start/End: Original strand, 23589834 - 23590073
Alignment:
Q  15 atgaaggcaaagaagagggatgaagatggtaataatgatggaaatgtatgcccatttgtaatgttggtttaattatttaataaaatgttccttttataaa 114  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  23589834 atgaaggcaaagaagagggatgaagattgtaataatgatggaaatgtatgcccatttgtaatgttggtttaattatttaataaaatgtttcttttataaa 23589933  T
Q  115 aataaaatccttgaattttgtatgaatatgaagaagtggtggacggaataagatgaagagagggnnnnnnnttatgtggtgatggttcactattgtatat 214  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||       ||| ||||||||||||||||||| |||||    
T  23589934 aataaaatccttgaattttgtatgaatatgaagaagtggtggaaggaataagatgaagagagggaaaaaaattaagtggtgatggttcactattctatat 23590033  T
Q  215 aacagacctgcaatcgaatggttgaaattatatcagaaat 254  Q
    ||| ||||||||||||||||||||||||||||||||||||    
T  23590034 aacggacctgcaatcgaatggttgaaattatatcagaaat 23590073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 206 - 364
Target Start/End: Original strand, 23178815 - 23178973
Alignment:
Q  206 attgtatataacagacctgcaatcgaatggttgaaattatatcagaaatgttacacattaaaaaactaacggagatgaccaaaatagtaaacaactgaag 305  Q
    |||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||    
T  23178815 attgtatataacggatctgcaatcgaatggttgaaattatatcagaaatgttacacattaaaaaactaacggagatgaccaaaataataaacgactgaag 23178914  T
Q  306 atttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    ||||||| ||||||||| | |||||||||||||||||||||||||||||||| ||||||    
T  23178915 atttatgggaccaatttaaaacagtttatagttaggggaccaaagtgaaaactaaaaat 23178973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 206 - 364
Target Start/End: Original strand, 23590072 - 23590230
Alignment:
Q  206 attgtatataacagacctgcaatcgaatggttgaaattatatcagaaatgttacacattaaaaaactaacggagatgaccaaaatagtaaacaactgaag 305  Q
    |||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||    
T  23590072 attgtatataacggatctgcaatcgaatggttgaaattatatcagaaatgttacacattaaaaaactaacggagatgaccaaaataataaacgactgaag 23590171  T
Q  306 atttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    ||||||| ||||||||| | |||||||||||||||||||||||||||||||| ||||||    
T  23590172 atttatgggaccaatttaaaacagtttatagttaggggaccaaagtgaaaactaaaaat 23590230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 61 - 364
Target Start/End: Complemental strand, 6707258 - 6706951
Alignment:
Q  61 tatgcccatttgtaatgttggtttaattatttaataaaatgttccttttataaaa----ataaaa----tccttgaattttgtatgaatatgaagaagtg 152  Q
    |||| |||||||||||||||||| |||| ||||||||||||||| ||||||||||    ||||||    |||||||||||||||||||||||| |||| |    
T  6707258 tatgtccatttgtaatgttggtt-aattctttaataaaatgttctttttataaaataaaataaaaatgttccttgaattttgtatgaatatga-gaaggg 6707161  T
Q  153 gtggacggaataagatgaagagagggnnnnnnnttatgtggtgatggttcactattgtatataacagacctgcaatcgaatggttgaaattatatcagaa 252  Q
    |||||  ||| |||||||||| ||||       ||||||||||||||||||| ||||||| |||  ||||||||||| ||||||||||||||||||| ||    
T  6707160 gtggaaagaagaagatgaaga-aggggaaaaaattatgtggtgatggttcac-attgtatttaatggacctgcaatctaatggttgaaattatatcataa 6707063  T
Q  253 atgttacacattaaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtg 352  Q
    || ||  ||||||||||||||||||||  ||||||||||||||||    |||||||||||  ||||| |||||||| |||||||||||||||||||| ||    
T  6707062 atatttgacattaaaaaactaacggaggggaccaaaatagtaaacggaagaagatttatggaaccaaattgagacactttatagttaggggaccaaaatg 6706963  T
Q  353 aaaaccaaaaat 364  Q
    ||| ||||||||    
T  6706962 aaatccaaaaat 6706951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 219 - 324
Target Start/End: Original strand, 40174711 - 40174815
Alignment:
Q  219 gacctgcaatcgaatggttgaaattatatcagaaatgttacacattaaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagacca 318  Q
    |||||||||||||||||||||||| |||| | |||| ||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  40174711 gacctgcaatcgaatggttgaaatcatataaaaaatatta-acattaaaaaactaacggagatgaccaaaatagtaaacaacagaagatttatgggacca 40174809  T
Q  319 atttga 324  Q
    | ||||    
T  40174810 aattga 40174815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 141 - 364
Target Start/End: Complemental strand, 37868004 - 37867781
Alignment:
Q  141 tatgaagaagtggtggacggaataagatgaagagagggnnnnnnnttatgtggtgatggttcactattgtatataacagacctgcaatcgaatggttgaa 240  Q
    ||||||||||||||||| |||| |||||||||| |||        ||| ||| || ||||||| | | |||||||| |||||| |||||||| ||| |||    
T  37868004 tatgaagaagtggtggaaggaagaagatgaagaaaggaaaaaaaattaggtgttggtggttcaatgtggtatataatagacctacaatcgaacggtcgaa 37867905  T
Q  241 attatatcagaaatgttacacattaaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttag 340  Q
    |  |||||| |||| ||| |||||||||||| ||| || |||||||||||  ||||| |  ||| |||| || |||||| |||||||| |||||||||||    
T  37867904 aacatatcaaaaatattaaacattaaaaaacaaacagacatgaccaaaatgataaacgaaagaaaatttgtgggaccaaattgagacactttatagttag 37867805  T
Q  341 gggaccaaagtgaaaaccaaaaat 364  Q
    |||| |||| ||||||||||||||    
T  37867804 gggatcaaattgaaaaccaaaaat 37867781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 266 - 362
Target Start/End: Complemental strand, 12853009 - 12852913
Alignment:
Q  266 aaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaa 362  Q
    |||| ||||||||||||||||||||||||||| |  ||||||||||| |||||| |||||||| |||||||||||||||||||| ||||| ||||||    
T  12853009 aaaatctaacggagatgaccaaaatagtaaacgatagaagatttatgggaccaaattgagacactttatagttaggggaccaaaatgaaatccaaaa 12852913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 251 - 364
Target Start/End: Original strand, 21012058 - 21012171
Alignment:
Q  251 aaatgttacacattaaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaag 350  Q
    |||| ||| ||||| |||||||||||||||||||||||||||||||| || ||||||||  | |||||| |||| ||| ||||||||||||||| ||||     
T  21012058 aaatattatacattcaaaaactaacggagatgaccaaaatagtaaacgacggaagatttgagggaccaaattgaaacactttatagttaggggatcaaaa 21012157  T
Q  351 tgaaaaccaaaaat 364  Q
    ||||||| ||||||    
T  21012158 tgaaaacaaaaaat 21012171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 266 - 364
Target Start/End: Complemental strand, 23177797 - 23177698
Alignment:
Q  266 aaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagtta-ggggaccaaagtgaaaaccaaaaat 364  Q
    ||||||||||||||| ||||||||| ||||||  | ||||||||||| |||||| |||||||| |||||||||| |||||||||| ||||||||||||||    
T  23177797 aaaaactaacggagaggaccaaaatggtaaacggcagaagatttatgggaccaaattgagacactttatagttagggggaccaaaatgaaaaccaaaaat 23177698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 266 - 364
Target Start/End: Complemental strand, 23589054 - 23588955
Alignment:
Q  266 aaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagtta-ggggaccaaagtgaaaaccaaaaat 364  Q
    ||||||||||||||| ||||||||| ||||||  | ||||||||||| |||||| |||||||| |||||||||| |||||||||| ||||||||||||||    
T  23589054 aaaaactaacggagaggaccaaaatggtaaacggcagaagatttatgggaccaaattgagacactttatagttagggggaccaaaatgaaaaccaaaaat 23588955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 265 - 349
Target Start/End: Complemental strand, 15650565 - 15650481
Alignment:
Q  265 aaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaa 349  Q
    |||| |||||||||||||||||||||||||||| ||  |||||||| || ||||| |||||||| ||||||||||||||||||||    
T  15650565 aaaatactaacggagatgaccaaaatagtaaacgacataagatttaagataccaaattgagacactttatagttaggggaccaaa 15650481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 265 - 364
Target Start/End: Complemental strand, 2581927 - 2581828
Alignment:
Q  265 aaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||| ||||||||||| |||||| |||||||||  |  |||||||||| |||||| |||||||| ||||||||||||||| |||| ||||||||||||||    
T  2581927 aaaatactaacggagaggaccaagatagtaaacggcgtaagatttatgggaccaaattgagacactttatagttaggggatcaaattgaaaaccaaaaat 2581828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 222 - 349
Target Start/End: Original strand, 3533575 - 3533702
Alignment:
Q  222 ctgcaatcgaatggttgaaattatatcagaaatgttacacattaaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatt 321  Q
    |||||||| || ||||||||| |||||| |||  ||| ||||||||| ||||||||| |||| | ||||||||||| ||  ||||||||||||||||| |    
T  3533575 ctgcaatcaaacggttgaaatcatatcaaaaaacttaaacattaaaatactaacggaaatgatcgaaatagtaaacgacaaaagatttatgagaccaaat 3533674  T
Q  322 tgagacagtttatagttaggggaccaaa 349  Q
    ||| ||| || ||||||| |||||||||    
T  3533675 tgacacacttaatagttaagggaccaaa 3533702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 270 - 364
Target Start/End: Complemental strand, 4829584 - 4829490
Alignment:
Q  270 actaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||||| |||| |||||||||||||||| ||  ||||||||||||| ||| |||||||| |||||||||| ||||| ||||||||||| ||||||    
T  4829584 actaacagagaggaccaaaatagtaaacgacataagatttatgagatcaaattgagacattttatagttaagggactaaagtgaaaacgaaaaat 4829490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 141 - 364
Target Start/End: Original strand, 10368253 - 10368476
Alignment:
Q  141 tatgaagaagtggtggacggaataagatgaagagagggnnnnnnnttatgtggtgatggttcactattgtatataacagacctgcaatcgaatggttgaa 240  Q
    ||||||| ||||||||| |||| |||||||||| |||        ||| ||| || ||||||| | | ||||||||  ||| |||||||||| ||| |||    
T  10368253 tatgaagcagtggtggaaggaagaagatgaagaaaggaaaaaaaattaggtgttggtggttcagtgtggtatataatggacatgcaatcgaacggtcgaa 10368352  T
Q  241 attatatcagaaatgttacacattaaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttag 340  Q
    |  |||||| |||| ||| | |||||||||| |||||| |||||||||||  |||||    ||| ||||||| || ||| |||||||| |||||||||||    
T  10368353 aacatatcaaaaatattaaatattaaaaaacaaacggacatgaccaaaatgataaacggaagaaaatttatgggatcaaattgagacactttatagttag 10368452  T
Q  341 gggaccaaagtgaaaaccaaaaat 364  Q
    |||| |||| |||||| |||||||    
T  10368453 gggatcaaattgaaaatcaaaaat 10368476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 265 - 364
Target Start/End: Original strand, 2583538 - 2583637
Alignment:
Q  265 aaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||| |||||| |||| |||||| ||||||||||    ||||||||||||||||| |||||||| |||||||||||||||| ||| | ||||||||||||    
T  2583538 aaaatactaacagagaggaccaagatagtaaacagtgtaagatttatgagaccaaattgagacactttatagttaggggacaaaattaaaaaccaaaaat 2583637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 265 - 364
Target Start/End: Original strand, 42028950 - 42029049
Alignment:
Q  265 aaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||| ||||||||||| |||||||||||||| | || ||||| ||||| |||||| | |||||| |||||||||||  ||||||| ||||||||||||||    
T  42028950 aaaatactaacggagaagaccaaaatagtaagcgacagaagaattatgggaccaaatcgagacactttatagttagatgaccaaaatgaaaaccaaaaat 42029049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 210 - 364
Target Start/End: Complemental strand, 12958595 - 12958441
Alignment:
Q  210 tatataacagacctgcaatcgaatggttgaaattatatcagaaatgttacacattaaaaaactaacggagatgaccaaaatagtaaacaactgaagattt 309  Q
    |||||||  |||||||||||||| | | ||||  |||| | |||| ||| |||||||||||| |||||| |||||||||||  ||||     ||| ||||    
T  12958595 tatataatggacctgcaatcgaacgatcgaaaacatataaaaaatattaaacattaaaaaacaaacggaaatgaccaaaatgataaatggaagaaaattt 12958496  T
Q  310 atgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    ||| |||||| |||||||| ||||||||||||||| |||| | ||||||||||||    
T  12958495 atgggaccaaattgagacactttatagttaggggatcaaattaaaaaccaaaaat 12958441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 266 - 353
Target Start/End: Complemental strand, 14509332 - 14509245
Alignment:
Q  266 aaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtga 353  Q
    ||||| ||||||||| |||||||||||||||| || ||||||||||| |||| | || | ||| |||||||||| |||||||||||||    
T  14509332 aaaaattaacggagaggaccaaaatagtaaacgacagaagatttatgggaccgaattaaaacactttatagttaagggaccaaagtga 14509245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 126 - 289
Target Start/End: Original strand, 14716047 - 14716211
Alignment:
Q  126 tgaattttgtatgaatatgaagaagtggtggacggaataagatgaagagaggg-nnnnnnnttatgtggtgatggttcactattgtatataacagacctg 224  Q
    ||||||||||||||| |||||||| ||||||| |||| |||||||||| ||||        ||| ||| || ||||||| | |||||||||| |||| ||    
T  14716047 tgaattttgtatgaacatgaagaaatggtggaaggaaaaagatgaagaaagggaaaaaaaattaggtgttggtggttcattgttgtatataatagacatg 14716146  T
Q  225 caatcgaatggttgaaattatatcagaaatgttacacattaaaaaactaacggagatgaccaaaa 289  Q
    ||||||||||  |||||| | |||| | || ||| | ||||||||||||| ||||| ||||||||    
T  14716147 caatcgaatgactgaaatcaaatcaaagatattagatattaaaaaactaatggagaggaccaaaa 14716211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 207 - 289
Target Start/End: Original strand, 26205981 - 26206063
Alignment:
Q  207 ttgtatataacagacctgcaatcgaatggttgaaattatatcagaaatgttacacattaaaaaactaacggagatgaccaaaa 289  Q
    ||||||| || |||| |||||||||||||||||||||||||   |||| |||  |||||||||||||||||||| ||||||||    
T  26205981 ttgtatacaatagacatgcaatcgaatggttgaaattatatataaaatattagtcattaaaaaactaacggagaggaccaaaa 26206063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 197 - 289
Target Start/End: Original strand, 4830599 - 4830691
Alignment:
Q  197 tggttcactattgtatataacagacctgcaatcgaatggttgaaattatatcagaaatgttacacattaaaaaactaacggagatgaccaaaa 289  Q
    ||||||| | ||||||| ||  ||||| |||||||||||||||||| |||||| |||| ||| ||||| ||||||||||||||| ||| ||||    
T  4830599 tggttcaatgttgtatacaatggacctacaatcgaatggttgaaatcatatcaaaaatattagacattcaaaaactaacggagaggactaaaa 4830691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 308 - 364
Target Start/End: Complemental strand, 35799593 - 35799537
Alignment:
Q  308 ttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||||||||||| |||||||| |||||||||||||||| ||| ||||||||||||||    
T  35799593 ttatgagaccaaattgagacactttatagttaggggactaaattgaaaaccaaaaat 35799537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 265 - 364
Target Start/End: Original strand, 6209057 - 6209155
Alignment:
Q  265 aaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||||||||||| ||| |||||||||||||||| ||  |||| ||||| |||||| || ||||| |||||||||||  ||||||| ||||| ||||||||    
T  6209057 aaaaaactaacgaagaagaccaaaatagtaaacgaca-aagaattatgggaccaaattaagacactttatagttagatgaccaaaatgaaatccaaaaat 6209155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 273 - 364
Target Start/End: Complemental strand, 7037082 - 7036991
Alignment:
Q  273 aacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||||| ||||||||||| ||||||  | ||||| ||||| |||||| |||| ||| |||||||||| ||||| ||||||||| ||||||||    
T  7037082 aacggaaatgaccaaaatggtaaacggcagaagacttatgggaccaaattgaaacactttatagttaagggactaaagtgaaatccaaaaat 7036991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 266 - 349
Target Start/End: Original strand, 7490188 - 7490271
Alignment:
Q  266 aaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaa 349  Q
    ||||||||||||| | ||||||||||||||||||   |||||||||| |||||| |||||||| |||||| |||  ||||||||    
T  7490188 aaaaactaacggataagaccaaaatagtaaacaataaaagatttatgggaccaaattgagacattttataattaaaggaccaaa 7490271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 233 - 292
Target Start/End: Original strand, 8538584 - 8538643
Alignment:
Q  233 tggttgaaattatatcagaaatgttacacattaaaaaactaacggagatgaccaaaatag 292  Q
    ||||||||||||||||| |||| |||  |||||||||| |||||||||||||||||||||    
T  8538584 tggttgaaattatatcaaaaatattagtcattaaaaaattaacggagatgaccaaaatag 8538643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 126 - 172
Target Start/End: Original strand, 40174616 - 40174662
Alignment:
Q  126 tgaattttgtatgaatatgaagaagtggtggacggaataagatgaag 172  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||||    
T  40174616 tgaatttggtatgaatatgaagaagtggtggaaggaataagatgaag 40174662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 186 - 239
Target Start/End: Original strand, 12854042 - 12854095
Alignment:
Q  186 ttatgtggtgatggttcactattgtatataacagacctgcaatcgaatggttga 239  Q
    ||||||||||||||||| |||||||||||||  ||||||||||| |||||||||    
T  12854042 ttatgtggtgatggttcgctattgtatataatggacctgcaatctaatggttga 12854095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 223 - 364
Target Start/End: Original strand, 7038290 - 7038423
Alignment:
Q  223 tgcaatcgaatggttgaaattatatcagaaatgttacacattaaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaattt 322  Q
    |||||||||||||||||||  |||||| ||||  || |||||||||||| |||||| | ||||||||  ||||||          ||||| |||||| ||    
T  7038290 tgcaatcgaatggttgaaacaatatcaaaaatagtaaacattaaaaaacaaacggaaaggaccaaaaaggtaaac--------ggttatgggaccaaatt 7038381  T
Q  323 gagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||||| |||||||||| ||||||||| ||||| ||||||||    
T  7038382 gagacactttatagttaagggaccaaaatgaaatccaaaaat 7038423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 312 - 364
Target Start/End: Complemental strand, 22900271 - 22900219
Alignment:
Q  312 gagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||||||| ||||||||||||| ||||||||||||||| ||||| ||||||||    
T  22900271 gagaccaaattgagacagtttaaagttaggggaccaaattgaaatccaaaaat 22900219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 61 - 104
Target Start/End: Original strand, 12853906 - 12853949
Alignment:
Q  61 tatgcccatttgtaatgttggtttaattatttaataaaatgttc 104  Q
    |||| ||||||||||||||||||||||| |||||||||||||||    
T  12853906 tatgtccatttgtaatgttggtttaattctttaataaaatgttc 12853949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 302 - 364
Target Start/End: Original strand, 12854133 - 12854195
Alignment:
Q  302 gaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    ||||||||||| |||||| |||||||| |||||||||| ||||||||| ||||| | ||||||    
T  12854133 gaagatttatgggaccaaattgagacactttatagttaagggaccaaaatgaaatctaaaaat 12854195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 349
Target Start/End: Complemental strand, 42596750 - 42596600
Alignment:
Q  199 gttcactattgtatataacagacctgcaatcgaatggttgaaattatatcagaaatgttacacattaaaaaactaacggagatgaccaaaatagtaaaca 298  Q
    |||||||||| |||| ||  || ||||||||| ||||||||| ||||||||  | | ||| ||||||||||||||||| ||||||  ||||||   ||||    
T  42596750 gttcactattatatacaatggatctgcaatcggatggttgaagttatatcaacattattagacattaaaaaactaacgaagatgattaaaatatgtaaca 42596651  T
Q  299 actgaagatttatgagaccaatttgagacagtttatagttaggggaccaaa 349  Q
    ||  || || ||   |||||| |||||||  || |||||||||||||||||    
T  42596650 acgtaatatatagaggaccaaattgagacgtttaatagttaggggaccaaa 42596600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 268 - 364
Target Start/End: Complemental strand, 2305661 - 2305565
Alignment:
Q  268 aaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    ||||||||||||| |||||||| ||  |||  | |||||  || | |||||| |||||||| ||||||||||||||| |||| ||||| ||||||||    
T  2305661 aaactaacggagaggaccaaaagaggtaacggcagaagacataagggaccaaattgagacactttatagttaggggatcaaaatgaaatccaaaaat 2305565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 320 - 364
Target Start/End: Original strand, 4701534 - 4701578
Alignment:
Q  320 tttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    ||||||||| ||||||||||||||| ||||||||||| |||||||    
T  4701534 tttgagacactttatagttaggggatcaaagtgaaaatcaaaaat 4701578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 364
Target Start/End: Original strand, 42368343 - 42368399
Alignment:
Q  308 ttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    ||||| |||||| | |||||| |||||||||||||||||||| ||||| ||||||||    
T  42368343 ttatgggaccaaatcgagacactttatagttaggggaccaaaatgaaatccaaaaat 42368399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 265 - 340
Target Start/End: Original strand, 1624968 - 1625043
Alignment:
Q  265 aaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttag 340  Q
    |||||| ||||||||| |||||||||||||||   |  |||||||||  |||||| |||||||| |||||||||||    
T  1624968 aaaaaattaacggagaagaccaaaatagtaaatggcataagatttataggaccaaattgagacactttatagttag 1625043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 312 - 355
Target Start/End: Original strand, 4630123 - 4630166
Alignment:
Q  312 gagaccaatttgagacagtttatagttaggggaccaaagtgaaa 355  Q
    |||||||| |||||||| |||||||||||||||||||| |||||    
T  4630123 gagaccaaattgagacactttatagttaggggaccaaaatgaaa 4630166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 314 - 365
Target Start/End: Complemental strand, 21541136 - 21541085
Alignment:
Q  314 gaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaatt 365  Q
    ||||||||||||||| |||| ||||| ||||||||| ||||| |||||||||    
T  21541136 gaccaatttgagacaatttaaagttaagggaccaaaatgaaatccaaaaatt 21541085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 269 - 364
Target Start/End: Original strand, 29424608 - 29424703
Alignment:
Q  269 aactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    ||||||| |||| |||||||| | |||||  | ||| ||| | | |||||| |||| ||| ||||||||||||||||||| || ||||||||||||    
T  29424608 aactaacagagaggaccaaaacaataaacggcagaatattcaagggaccaaattgaaacactttatagttaggggaccaatgtaaaaaccaaaaat 29424703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 321 - 364
Target Start/End: Original strand, 30202931 - 30202974
Alignment:
Q  321 ttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    ||||||||||||| ||||||||||||||| ||||| ||||||||    
T  30202931 ttgagacagtttaaagttaggggaccaaattgaaatccaaaaat 30202974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 218 - 280
Target Start/End: Original strand, 4513698 - 4513760
Alignment:
Q  218 agacctgcaatcgaatggttgaaattatatcagaaatgttacacattaaaaaactaacggaga 280  Q
    |||| ||||||| ||||||||||||||||||| |||| |||   | |||||||||||||||||    
T  4513698 agacatgcaatcaaatggttgaaattatatcaaaaatattatttaataaaaaactaacggaga 4513760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 314 - 364
Target Start/End: Original strand, 17179292 - 17179342
Alignment:
Q  314 gaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||||| ||||||||||||| ||||||||||||||| |||||  |||||||    
T  17179292 gaccaaattgagacagtttaaagttaggggaccaaattgaaattcaaaaat 17179342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 314 - 364
Target Start/End: Original strand, 21545110 - 21545160
Alignment:
Q  314 gaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    ||||||||||||||| |||| ||||| ||||||||| ||||| ||||||||    
T  21545110 gaccaatttgagacaatttaaagttaagggaccaaaatgaaatccaaaaat 21545160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 314 - 364
Target Start/End: Original strand, 22653068 - 22653118
Alignment:
Q  314 gaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||||| ||||||||||||| ||||||||||||| | ||||| ||||||||    
T  22653068 gaccaaattgagacagtttaaagttaggggaccatattgaaatccaaaaat 22653118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 314 - 364
Target Start/End: Complemental strand, 33836844 - 33836794
Alignment:
Q  314 gaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||||| |||||||| |||||||||||||||||||| ||||| || |||||    
T  33836844 gaccaaattgagacactttatagttaggggaccaaaatgaaatccgaaaat 33836794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 314 - 364
Target Start/End: Original strand, 38801239 - 38801289
Alignment:
Q  314 gaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    ||||||||||||||| |||| ||||||||||||||| |||||  |||||||    
T  38801239 gaccaatttgagacaatttaaagttaggggaccaaattgaaatgcaaaaat 38801289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 314 - 364
Target Start/End: Original strand, 41795993 - 41796043
Alignment:
Q  314 gaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||||| |||||||| ||||||||||||||| |||| |||||| |||||||    
T  41795993 gaccaaattgagacactttatagttaggggatcaaaatgaaaatcaaaaat 41796043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 363
Target Start/End: Complemental strand, 42246715 - 42246617
Alignment:
Q  265 aaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaa 363  Q
    |||||||||||| | | ||||||||||||||||     |||| ||||| || ||| |||| ||| |||||| |||||||| |||| |||||||||||||    
T  42246715 aaaaaactaacgaaaaggaccaaaatagtaaacggtaaaagagttatgggatcaaattgaaacactttataattaggggatcaaaatgaaaaccaaaaa 42246617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 266 - 339
Target Start/End: Complemental strand, 8537135 - 8537062
Alignment:
Q  266 aaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagtta 339  Q
    |||||||||||||||||||||||||||  ||| || ||| |  || | ||||||||||||||| ||| ||||||    
T  8537135 aaaaactaacggagatgaccaaaatagataacgacagaatacataagggaccaatttgagacattttttagtta 8537062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 266 - 339
Target Start/End: Original strand, 15850652 - 15850725
Alignment:
Q  266 aaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagtta 339  Q
    ||||||||||| ||  |||||||||||  |||| | ||||| |||||||||||| |||| ||| ||||||||||    
T  15850652 aaaaactaacgaagtggaccaaaataggtaacagcagaagagttatgagaccaaattgaaacattttatagtta 15850725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 314 - 362
Target Start/End: Original strand, 2306702 - 2306750
Alignment:
Q  314 gaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaa 362  Q
    |||||| |||||||| |||| ||||||||||||||| ||||| ||||||    
T  2306702 gaccaaattgagacactttacagttaggggaccaaaatgaaatccaaaa 2306750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 270
Target Start/End: Original strand, 2717699 - 2717775
Alignment:
Q  194 tgatggttcactattgtatataacagacctgcaatcgaatggttgaaattatatcagaaatgttacacattaaaaaa 270  Q
    ||||||||||| |||  ||||||  ||| ||||||| ||||||| |||| | ||||||||| ||| |||||||||||    
T  2717699 tgatggttcaccatttgatataatggacgtgcaatcaaatggttaaaatcagatcagaaatattaaacattaaaaaa 2717775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 312 - 364
Target Start/End: Original strand, 3255917 - 3255969
Alignment:
Q  312 gagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||||||| |||| ||| |||||||||||||||||||| ||||| || |||||    
T  3255917 gagaccaaattgaaacactttatagttaggggaccaaaatgaaatccgaaaat 3255969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 364
Target Start/End: Complemental strand, 43015620 - 43015564
Alignment:
Q  308 ttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    ||||| |||||| ||||||||||||| ||||| ||||||||| |||||  |||||||    
T  43015620 ttatgggaccaaattgagacagtttaaagttaagggaccaaaatgaaattcaaaaat 43015564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 171; Significance: 1e-91; HSPs: 66)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 69 - 364
Target Start/End: Complemental strand, 14206999 - 14206698
Alignment:
Q  69 tttgtaatgttggtttaattatttaataaaatgttccttttataaaaataaaa------tccttgaattttgtatgaatatgaagaagtggtggacggaa 162  Q
    |||||||||||||||||||| |||||||||||||||||||||| || | ||||      |||||||||||||||||||||| ||||||||||||| ||||    
T  14206999 tttgtaatgttggtttaattctttaataaaatgttccttttatcaacaaaaaaaaatgttccttgaattttgtatgaatatcaagaagtggtggaaggaa 14206900  T
Q  163 taagatgaagagagggnnnnnnn-ttatgtggtgatggttcactattgtatataacagacctgcaatcgaatggttgaaattatatcagaaatgttacac 261  Q
     |||||||||||||||        |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||     
T  14206899 gaagatgaagagagggaaggaaaattatgtggtgatggttcactattgtatataatggacctgcaatcgaatggttgaaattatatcagaaatgttaca- 14206801  T
Q  262 attaaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaa 361  Q
    |||||||||||||||||||||| ||||||||||||| || ||||||||||  |||||| |||| ||| |||||||||||| |||||||||||||||||||    
T  14206800 attaaaaaactaacggagatgagcaaaatagtaaacgacagaagatttataggaccaaattgaaacattttatagttaggcgaccaaagtgaaaaccaaa 14206701  T
Q  362 aat 364  Q
    |||    
T  14206700 aat 14206698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 69 - 364
Target Start/End: Complemental strand, 14215689 - 14215388
Alignment:
Q  69 tttgtaatgttggtttaattatttaataaaatgttccttttataaaaataaaa------tccttgaattttgtatgaatatgaagaagtggtggacggaa 162  Q
    |||||||||||||||||||| |||||||||||||||||||||| || | ||||      |||||||||||||||||||||| ||||||||||||| ||||    
T  14215689 tttgtaatgttggtttaattctttaataaaatgttccttttatcaacaaaaaaaaatgttccttgaattttgtatgaatatcaagaagtggtggaaggaa 14215590  T
Q  163 taagatgaagagagggnnnnnnn-ttatgtggtgatggttcactattgtatataacagacctgcaatcgaatggttgaaattatatcagaaatgttacac 261  Q
     |||||||||||||||        |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||     
T  14215589 gaagatgaagagagggaaggaaaattatgtggtgatggttcactattgtatataatggacctgcaatcgaatggttgaaattatatcagaaatgttaca- 14215491  T
Q  262 attaaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaa 361  Q
    |||||||||||||||||||||| ||||||||||||| || ||||||||||  |||||| |||| ||| |||||||||||| |||||||||||||||||||    
T  14215490 attaaaaaactaacggagatgagcaaaatagtaaacgacagaagatttataggaccaaattgaaacattttatagttaggcgaccaaagtgaaaaccaaa 14215391  T
Q  362 aat 364  Q
    |||    
T  14215390 aat 14215388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 128 - 364
Target Start/End: Original strand, 13446514 - 13446749
Alignment:
Q  128 aattttgtatgaatatgaagaagtggtggacggaataagatgaagagagggnnnnnnnttatgtggtgatggttcactattgtatataacagacctgcaa 227  Q
    |||||||||||||||||| ||||||||||| |||  ||||||||||||||        |||||||||||||||||||| |||||||||   ||| |||||    
T  13446514 aattttgtatgaatatgatgaagtggtggaaggatgaagatgaagagagg-aaaaaaattatgtggtgatggttcactgttgtatatattggacatgcaa 13446612  T
Q  228 tcgaatggttgaaattatatcagaaatgttacacattaaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagac 327  Q
    ||||||||||||||| |||| |||||||||||||||||||||||||||||||| |||||| ||| |||||  | ||||||||||| |||||| |||||||    
T  13446613 tcgaatggttgaaatcatatgagaaatgttacacattaaaaaactaacggagaggaccaatataataaacggcagaagatttatgggaccaaattgagac 13446712  T
Q  328 agtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    | | |||||||   | |||||||||||||||||||||    
T  13446713 actatatagttgaagaaccaaagtgaaaaccaaaaat 13446749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 126 - 356
Target Start/End: Original strand, 43931719 - 43931949
Alignment:
Q  126 tgaattttgtatgaatatgaagaagtggtggacggaataagatgaagagagggnnnnnnnttatgtggtgatggttcactattgtatataacagacct-g 224  Q
    |||||| |||||||| |||||||||||||||| |||| |||||||||||||||       ||||||||||||||||||||||||| |||||  || || |    
T  43931719 tgaattatgtatgaacatgaagaagtggtggaaggaagaagatgaagagagggaaaaaa-ttatgtggtgatggttcactattgtgtataatggatcttg 43931817  T
Q  225 caatcgaatggttgaaattatatcagaaatgttacacattaaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttga 324  Q
    |||||||||| || |||| || ||| |||||||| ||||||||||||||||||||  |||||||||||||||  || |||| |||||| |||||| ||||    
T  43931818 caatcgaatgattcaaatcatttcaaaaatgttagacattaaaaaactaacggaggggaccaaaatagtaaatgacagaaggtttatgggaccaaattga 43931917  T
Q  325 gacagtttatagttaggggaccaaagtgaaaa 356  Q
     ||  || |||||||| |||||| ||||||||    
T  43931918 tacgtttaatagttagaggaccagagtgaaaa 43931949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 197 - 364
Target Start/End: Complemental strand, 14108024 - 14107857
Alignment:
Q  197 tggttcactattgtatataacagacctgcaatcgaatggttgaaattatatcagaaatgttacacattaaaaaactaacggagatgaccaaaatagtaaa 296  Q
    ||||||||| | |||||| |  ||||||||||| || ||||  |||||||| | |||| ||| |||| |||||||||||||||| ||||||||  || ||    
T  14108024 tggttcactgtagtatattatggacctgcaatcaaacggttataattatattaaaaatattagacatcaaaaaactaacggagaggaccaaaacggtgaa 14107925  T
Q  297 caactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    | || |||||| || | ||||| ||||||||| |||||||||| ||||||||| ||||||||||||||    
T  14107924 cgacagaagatataagggaccactttgagacactttatagttaagggaccaaaatgaaaaccaaaaat 14107857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 197 - 364
Target Start/End: Complemental strand, 14417981 - 14417814
Alignment:
Q  197 tggttcactattgtatataacagacctgcaatcgaatggttgaaattatatcagaaatgttacacattaaaaaactaacggagatgaccaaaatagtaaa 296  Q
    ||||||||| | |||||| |  ||||||||||| || ||||  |||||||| | |||| ||| |||| |||||||||||||||| ||||||||  || ||    
T  14417981 tggttcactgtagtatattatggacctgcaatcaaacggttataattatattaaaaatattagacatcaaaaaactaacggagaggaccaaaacggtgaa 14417882  T
Q  297 caactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    | || |||||| || | ||||| ||||||||| |||||||||| ||||||||| ||||||||||||||    
T  14417881 cgacagaagatataagggaccactttgagacactttatagttaagggaccaaaatgaaaaccaaaaat 14417814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 265 - 364
Target Start/End: Original strand, 19279604 - 19279703
Alignment:
Q  265 aaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||| ||||||||| | |||||||||||||||| ||  || ||||||| |||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  19279604 aaaatactaacggaaaggaccaaaatagtaaacgacaaaaaatttatgggaccaaattgagacactttatagttaggggaccaaagtgaaaaccaaaaat 19279703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 251 - 364
Target Start/End: Original strand, 4858322 - 4858435
Alignment:
Q  251 aaatgttacacattaaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaag 350  Q
    |||| ||| |||| ||||||||||  |||| ||  ||||||||||||||| ||||||||||| |||||| |||||||| ||||||||||||||| |||||    
T  4858322 aaatattagacatcaaaaaactaatagagaggattaaaatagtaaacaacagaagatttatgggaccaaattgagacattttatagttaggggatcaaag 4858421  T
Q  351 tgaaaaccaaaaat 364  Q
    ||||||| ||||||    
T  4858422 tgaaaactaaaaat 4858435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 224 - 364
Target Start/End: Original strand, 24873548 - 24873688
Alignment:
Q  224 gcaatcgaatggttgaaattatatcagaaatgttacacattaaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttg 323  Q
    |||||| |||||||||||  |||||| ||||  || |||||||||||| |||||| ||||||||||| ||||||  | ||||| ||||| |||||| |||    
T  24873548 gcaatcaaatggttgaaacaatatcaaaaatagtaaacattaaaaaacaaacggaaatgaccaaaatggtaaacggcagaagacttatgggaccaaattg 24873647  T
Q  324 agacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    ||||| ||||||||||||| | |||| ||||||| ||||||    
T  24873648 agacactttatagttagggcatcaaaatgaaaacaaaaaat 24873688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 265 - 364
Target Start/End: Original strand, 43936132 - 43936231
Alignment:
Q  265 aaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||||||||||||||| |||||||||||||||| || ||||| |||||||||||| || ||| | ||||||||||| |||||||| ||||| ||||||||    
T  43936132 aaaaaactaacggagaggaccaaaatagtaaacgacagaagaattatgagaccaaattaagaaactttatagttagaggaccaaaatgaaatccaaaaat 43936231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 266 - 364
Target Start/End: Complemental strand, 4857324 - 4857226
Alignment:
Q  266 aaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    ||||||||||||||| ||| |||| |||||||  | |||||||| || |||||| | |||||| |||||||||||||||||||||||||||||||||||    
T  4857324 aaaaactaacggagaggactaaaacagtaaacggcagaagatttgtgggaccaaatcgagacattttatagttaggggaccaaagtgaaaaccaaaaat 4857226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 219 - 355
Target Start/End: Complemental strand, 25532314 - 25532179
Alignment:
Q  219 gacctgcaatcgaatggttgaaattatatcagaaatgttacacattaaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagacca 318  Q
    |||||||||||||||||||||||| |||||| |||| ||| ||||||||||||||||| |   || | |||||||||||  |  |||||||||||||| |    
T  25532314 gacctgcaatcgaatggttgaaatcatatcaaaaatattaaacattaaaaaactaacgaaagaga-ctaaatagtaaactgcaaaagatttatgagacta 25532216  T
Q  319 atttgagacagtttatagttaggggaccaaagtgaaa 355  Q
    | | || ||| |||||||||||||||||||| |||||    
T  25532215 aatcgaaacactttatagttaggggaccaaattgaaa 25532179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 213 - 356
Target Start/End: Complemental strand, 25153834 - 25153691
Alignment:
Q  213 ataacagacctgcaatcgaatggttgaaattatatcagaaatgttacacattaaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatg 312  Q
    |||| ||||||||||||||| ||| ||||  |||||| |||| ||| | ||||||||||  ||||| | ||||||||  ||||||    |||||||||||    
T  25153834 ataatagacctgcaatcgaacggtcgaaaacatatcaaaaatattagatattaaaaaacacacggacaagaccaaaacggtaaacggaagaagatttatg 25153735  T
Q  313 agaccaatttgagacagtttatagttaggggaccaaagtgaaaa 356  Q
     |||||| |||||||| |||||||||||||||||||| ||||||    
T  25153734 ggaccaaattgagacactttatagttaggggaccaaattgaaaa 25153691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 266 - 364
Target Start/End: Complemental strand, 38406141 - 38406043
Alignment:
Q  266 aaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    ||||| ||||||| | |||||||| |||||||  | |||||||||||  |||| ||||||||| |||||||||||||||||||| ||||||||||||||    
T  38406141 aaaaattaacggaaaggaccaaaacagtaaacgtcagaagatttatggaaccagtttgagacactttatagttaggggaccaaaatgaaaaccaaaaat 38406043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 198 - 364
Target Start/End: Complemental strand, 41515187 - 41515022
Alignment:
Q  198 ggttcactattgtatataacagacctgcaatcgaatggttgaaattatatcagaaatgttacacattaaaaaactaacggagatgaccaaaatagtaaac 297  Q
    |||||||||||  ||||||  ||| ||||||| ||||||| |||| |||| | |||  ||| ||||||||||| |||||||||  |||| ||||||||||    
T  41515187 ggttcactattaaatataatggacatgcaatcaaatggttaaaatcatataaaaaactttagacattaaaaaattaacggagagaaccacaatagtaaac 41515088  T
Q  298 aactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |  |||||| ||||| |||||| |||| ||| |||||||||| || |||||| | ||||||||||||    
T  41515087 atatgaagacttatgggaccaaattgaaacactttatagtta-ggaaccaaaattaaaaccaaaaat 41515022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 266 - 364
Target Start/End: Complemental strand, 43930442 - 43930344
Alignment:
Q  266 aaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    ||||| |||| |||| |||||||||||||||| || ||||||||||  |||||| |||||||  || |||||||||||||||||||||||| |||||||    
T  43930442 aaaaattaacagagaggaccaaaatagtaaacgacagaagatttataggaccaaattgagacgtttaatagttaggggaccaaagtgaaaatcaaaaat 43930344  T

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Target: chr7; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 251 - 364
Target Start/End: Original strand, 40926497 - 40926610
Alignment:
Q  251 aaatgttacacattaaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaag 350  Q
    |||| ||| ||||||||||  ||||||||| ||||||||  ||||||    ||| ||||||  |||||| |||||||| |||||||||||||||||||||    
T  40926497 aaatattagacattaaaaagttaacggagaggaccaaaacggtaaacggtagaaaatttataggaccaaattgagacactttatagttaggggaccaaag 40926596  T
Q  351 tgaaaaccaaaaat 364  Q
    ||||||||||||||    
T  40926597 tgaaaaccaaaaat 40926610  T

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Target: chr7; HSP #18
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 264 - 364
Target Start/End: Complemental strand, 43006510 - 43006410
Alignment:
Q  264 taaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaa 363  Q
    ||||| ||||||||||||||||||||||| ||||  |  |||| ||| | |||||| |||||||| || ||||||||||||||||| |||||||||||||    
T  43006510 taaaatactaacggagatgaccaaaatagcaaacggcataagacttaggggaccaaattgagacacttaatagttaggggaccaaattgaaaaccaaaaa 43006411  T
Q  364 t 364  Q
    |    
T  43006410 t 43006410  T

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Target: chr7; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 265 - 364
Target Start/End: Original strand, 22746312 - 22746411
Alignment:
Q  265 aaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||| ||||||||||| || |||||||||||||  |  |||||||||| |||||| |||||||| |||||||||||||||| ||| ||||||| ||||||    
T  22746312 aaaatactaacggagaggatcaaaatagtaaacggcacaagatttatgggaccaaattgagacactttatagttaggggactaaattgaaaacaaaaaat 22746411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 265 - 364
Target Start/End: Complemental strand, 43935309 - 43935210
Alignment:
Q  265 aaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||||||||| || || ||  ||||||||||||  | |||||||||||||||||| |||||||| ||||||||||| |||||||| ||||| ||||||||    
T  43935309 aaaaaactaatggggaggatgaaaatagtaaacggcagaagatttatgagaccaaattgagacactttatagttagaggaccaaaatgaaatccaaaaat 43935210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 266 - 365
Target Start/End: Original strand, 46458706 - 46458805
Alignment:
Q  266 aaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaatt 365  Q
    |||||| |||||||| ||||||||| ||||||    ||||||||||| |||||| |||||||| |||||||||| ||||||||| |||||| ||||||||    
T  46458706 aaaaacaaacggagaggaccaaaatggtaaacggaagaagatttatgggaccaaattgagacactttatagttaagggaccaaattgaaaatcaaaaatt 46458805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 266 - 364
Target Start/End: Original strand, 25154929 - 25155027
Alignment:
Q  266 aaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||||| ||||||||||||||||||  ||||||   ||||||||||||||  || |||||||| |||||||||| |||| |||| ||||||||||||||    
T  25154929 aaaaacaaacggagatgaccaaaatgataaacagaagaagatttatgagattaaattgagacactttatagttaagggatcaaattgaaaaccaaaaat 25155027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 198 - 364
Target Start/End: Original strand, 28326315 - 28326480
Alignment:
Q  198 ggttcactattgtatataacagacctgcaatcgaatggttgaaattatatcagaaatgttacacattaaaaaactaacggagatgaccaaaatagtaaac 297  Q
    |||||||||||  ||||||  ||| ||||||| ||||||| |||| |||| | |||  ||| ||||||||||||||||||||| ||||| ||||||||||    
T  28326315 ggttcactattaaatataatggacatgcaatcaaatggttaaaatcatattaaaaaatttagacattaaaaaactaacggagaggaccacaatagtaaac 28326414  T
Q  298 aactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
        ||||| ||||   ||||| |||||||| |||||||| ||| ||||||| | ||||||||||||    
T  28326415 ggaggaagacttatagaaccaaattgagacactttatagtcaggagaccaaaat-aaaaccaaaaat 28326480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 266 - 364
Target Start/End: Complemental strand, 40930541 - 40930443
Alignment:
Q  266 aaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||||||||  |||| ||| ||||  ||||||| |  |||||||||| |||||| |||| ||| |||||||||||||||||||||||||||||||||||    
T  40930541 aaaaactaatagagaggactaaaacggtaaacatcaaaagatttatgggaccaaattgaaacactttatagttaggggaccaaagtgaaaaccaaaaat 40930443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 283 - 364
Target Start/End: Complemental strand, 45719721 - 45719640
Alignment:
Q  283 accaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||||||| ||||||||| ||||| |||||||||||| || ||||| ||||||||||||||| |||| |||||| |||||||    
T  45719721 accaaaatggtaaacaacagaagagttatgagaccaaatttagacactttatagttaggggatcaaactgaaaatcaaaaat 45719640  T

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Target: chr7; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 218 - 349
Target Start/End: Original strand, 10257333 - 10257462
Alignment:
Q  218 agacctgcaatcgaatggttgaaattatatcagaaatgttacacattaaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagacc 317  Q
    |||||||||||| || |||||||||||||| | |||| ||| |||||| || |||||| || ||||| |||||||||||| ||  |||| ||||| ||||    
T  10257333 agacctgcaatcaaacggttgaaattatataaaaaatattagacattagaatactaacagaaatgactaaaatagtaaacgac--aagagttatgggacc 10257430  T
Q  318 aatttgagacagtttatagttaggggaccaaa 349  Q
    || |||||||| || ||||||| |||| ||||    
T  10257431 aaattgagacacttaatagttaagggatcaaa 10257462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 265 - 357
Target Start/End: Original strand, 22061787 - 22061879
Alignment:
Q  265 aaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaac 357  Q
    |||| ||||||||||| ||| ||||||||||||  |  |||||||||| |||||| |||||||  |||||||||||||||||||| |||||||    
T  22061787 aaaatactaacggagaagactaaaatagtaaacggcataagatttatgggaccaaattgagacgttttatagttaggggaccaaattgaaaac 22061879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 272 - 364
Target Start/End: Original strand, 46674933 - 46675025
Alignment:
Q  272 taacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    ||||||||| ||||||||||||||||  |  |||||||||| |||||| | |||||| |||||||||| |||| |||| ||||||||||||||    
T  46674933 taacggagaggaccaaaatagtaaacggcaaaagatttatgggaccaaatcgagacactttatagttaagggatcaaattgaaaaccaaaaat 46675025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 265 - 364
Target Start/End: Original strand, 43007641 - 43007740
Alignment:
Q  265 aaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||| |||||||||||  || |||||||||||| ||  |||| ||||| |||||| |||||||| ||||||||||| |||||||| |||||| |||||||    
T  43007641 aaaatactaacggagagaactaaaatagtaaacgacataagacttatgggaccaaattgagacactttatagttagaggaccaaattgaaaatcaaaaat 43007740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 271 - 364
Target Start/End: Complemental strand, 19278471 - 19278378
Alignment:
Q  271 ctaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||||| ||| ||||||||||||||||  | ||||| ||||| |||||| |||||||| |||||| ||| ||||||||| ||||| ||||||||    
T  19278471 ctaacgaagaggaccaaaatagtaaacggcagaagaattatgggaccaaattgagacactttataattaagggaccaaaatgaaatccaaaaat 19278378  T

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Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 223 - 364
Target Start/End: Original strand, 45721716 - 45721857
Alignment:
Q  223 tgcaatcgaatggttgaaattatatcagaaatgttacacattaaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaattt 322  Q
    ||||||| ||||||| |||| | || | |||  ||| ||||||||||||||||||||| || || | ||||||||    ||| | |||||  ||||| ||    
T  45721716 tgcaatcaaatggttaaaatcacataaaaaaatttagacattaaaaaactaacggagaggatcacattagtaaacggaggaaaacttatggaaccaaatt 45721815  T
Q  323 gagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||||| |||||||||||||||||||| ||||||| ||||||    
T  45721816 gagacactttatagttaggggaccaaaatgaaaactaaaaat 45721857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 272 - 364
Target Start/End: Complemental strand, 22744863 - 22744771
Alignment:
Q  272 taacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    ||||||||| ||||||||||||||||  |  |||||||||  |||||| |||| ||| |||||||||||||||| ||| |||||| |||||||    
T  22744863 taacggagaagaccaaaatagtaaacggcataagatttataggaccaaattgaaacactttatagttaggggactaaattgaaaatcaaaaat 22744771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 272 - 363
Target Start/End: Complemental strand, 35127927 - 35127836
Alignment:
Q  272 taacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaa 363  Q
    ||||| ||||||||||||||||||||  |  |||||||||| ||| || |||||||| ||||||||||| | |||||| | |||||||||||    
T  35127927 taacgaagatgaccaaaatagtaaacggcataagatttatgggacaaaattgagacattttatagttagagaaccaaatttaaaaccaaaaa 35127836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 272 - 363
Target Start/End: Original strand, 36702949 - 36703040
Alignment:
Q  272 taacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaa 363  Q
    ||||||| | ||||||||||||||||  | ||| ||||||| |||||| ||||||||||||| | ||||||||| ||| ||||| |||||||    
T  36702949 taacggaaaggaccaaaatagtaaacggcagaatatttatgggaccaaattgagacagtttaaatttaggggactaaaatgaaatccaaaaa 36703040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 265 - 364
Target Start/End: Complemental strand, 46673613 - 46673515
Alignment:
Q  265 aaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||| ||||| ||||| |||||| |||||||||   | |||||||||| |||||| |||| ||| ||||| |||||||||||||| ||||||||||||||    
T  46673613 aaaatactaatggagaggaccaacatagtaaacgcat-aagatttatgggaccaaattgaaacactttattgttaggggaccaaattgaaaaccaaaaat 46673515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 265 - 364
Target Start/End: Complemental strand, 47163277 - 47163178
Alignment:
Q  265 aaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||||||||||||||| ||||||||||||||||     |||||||||| |||||| || || || ||||||||||| |||||||| | ||| ||||||||    
T  47163277 aaaaaactaacggagaggaccaaaatagtaaacggaaaaagatttatgggaccaaattaaggcactttatagttagaggaccaaaataaaatccaaaaat 47163178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 226 - 364
Target Start/End: Original strand, 18802342 - 18802480
Alignment:
Q  226 aatcgaatggttgaaattatatcagaaatgttacacattaaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgag 325  Q
    ||||||||||||  ||| |||| | ||||  || |||| |||||||| |||| ||| || |||||||| ||| |  ||| ||||||| ||| || |||||    
T  18802342 aatcgaatggttataatcatattaaaaatactagacatcaaaaaactgacggcgataactaaaatagtgaacgatagaaaatttatgggactaaattgag 18802441  T
Q  326 acagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    ||| ||||||||||||||| |||| ||||||| ||||||    
T  18802442 acactttatagttaggggatcaaaatgaaaacaaaaaat 18802480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 302 - 364
Target Start/End: Original strand, 33459572 - 33459634
Alignment:
Q  302 gaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    ||||| ||||| |||||| |||||||| ||||||||||| |||||||| ||||||||||||||    
T  33459572 gaagacttatgggaccaaattgagacactttatagttagaggaccaaaatgaaaaccaaaaat 33459634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 314 - 364
Target Start/End: Original strand, 38408315 - 38408365
Alignment:
Q  314 gaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    ||||||||||||||| ||||||||||| ||||||||||||||| |||||||    
T  38408315 gaccaatttgagacactttatagttagaggaccaaagtgaaaatcaaaaat 38408365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 302 - 364
Target Start/End: Complemental strand, 46457157 - 46457095
Alignment:
Q  302 gaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    ||||||||||| |||||| |||||||| |||||||||| |||| |||| ||||||||||||||    
T  46457157 gaagatttatgggaccaaattgagacactttatagttaagggatcaaattgaaaaccaaaaat 46457095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 264 - 349
Target Start/End: Complemental strand, 22060588 - 22060503
Alignment:
Q  264 taaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaa 349  Q
    ||||| ||||||||||||||||||||||||||||  |  |||| || ||  ||||| |||||||| ||||||||||| ||||||||    
T  22060588 taaaatactaacggagatgaccaaaatagtaaacggcataagacttgtggaaccaaattgagacactttatagttagaggaccaaa 22060503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 275 - 364
Target Start/End: Complemental strand, 36702891 - 36702802
Alignment:
Q  275 cggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||| |||| |||||||||||||  | ||| ||||||| |||||| ||||||||||||| ||||| ||||||||| ||||| | ||||||    
T  36702891 cggaaatgatcaaaatagtaaacggcagaatatttatgggaccaaattgagacagtttaaagttaagggaccaaaatgaaatctaaaaat 36702802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 266 - 357
Target Start/End: Complemental strand, 26406248 - 26406157
Alignment:
Q  266 aaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaac 357  Q
    ||||| |||||||||||||||||||  |||||  | ||||| |||||||| ||| |||||||| ||||| |||| |||| |||| |||||||    
T  26406248 aaaaaataacggagatgaccaaaatgttaaacggcagaagagttatgagatcaaattgagacactttatcgttatgggatcaaattgaaaac 26406157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 266 - 349
Target Start/End: Original strand, 27899207 - 27899290
Alignment:
Q  266 aaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaa 349  Q
    ||||||||||||| | |||||||||||||||| ||  |||||||||| || ||| |||||| | ||||||||||  ||||||||    
T  27899207 aaaaactaacggataagaccaaaatagtaaacgacaaaagatttatgggatcaaattgagatattttatagttaaaggaccaaa 27899290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 302 - 364
Target Start/End: Original strand, 17288249 - 17288311
Alignment:
Q  302 gaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    ||||| ||||| |||||| |||||||| |||||||||||||||||||| | ||||| ||||||    
T  17288249 gaagacttatgggaccaaattgagacactttatagttaggggaccaaaattaaaacaaaaaat 17288311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 306 - 364
Target Start/End: Complemental strand, 18801298 - 18801240
Alignment:
Q  306 atttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    ||||||| |||||| |||||||| |||||||||||||||||||| |||||  |||||||    
T  18801298 atttatgggaccaaattgagacactttatagttaggggaccaaaatgaaattcaaaaat 18801240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 280 - 349
Target Start/End: Complemental strand, 10256232 - 10256163
Alignment:
Q  280 atgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaa 349  Q
    |||||||||||| ||||| |  ||||| ||||||||||| ||||||||| || ||||||| |||||||||    
T  10256232 atgaccaaaatactaaacgatagaagagttatgagaccattttgagacacttaatagttaagggaccaaa 10256163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 357
Target Start/End: Complemental strand, 7146903 - 7146812
Alignment:
Q  265 aaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaac 357  Q
    |||| ||||| ||||| |||||||| ||||||  ||  |||||||| | |||||| |||| ||| |||||||||||||||||||| |||||||    
T  7146903 aaaatactaatggagaggaccaaaacagtaaatgacataagatttaag-gaccaaattgaaacactttatagttaggggaccaaattgaaaac 7146812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 357
Target Start/End: Original strand, 7148050 - 7148142
Alignment:
Q  265 aaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaac 357  Q
    |||| |||||||||||  ||||||| ||||||| ||  |||||||| | |||||| |||| ||| |||||||||||  ||||||| |||||||    
T  7148050 aaaatactaacggagagaaccaaaacagtaaacgacataagatttaagggaccaaattgaaacactttatagttagatgaccaaattgaaaac 7148142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 268 - 364
Target Start/End: Complemental strand, 30222767 - 30222671
Alignment:
Q  268 aaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    ||||||||||||| |||||||| ||  ||| || |||||  || | |||||| |||||| | |||||| ||||||||||||| ||||| ||||||||    
T  30222767 aaactaacggagaggaccaaaagaggtaacgacagaagacataagggaccaaattgagatactttataattaggggaccaaaatgaaatccaaaaat 30222671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 268 - 364
Target Start/End: Complemental strand, 33458430 - 33458335
Alignment:
Q  268 aaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    ||||||||||||| ||||| | ||||||||    ||||| ||||| ||| |||| |||||| ||||||||||  |||||||| ||||||||||||||    
T  33458430 aaactaacggagaggaccacattagtaaacggaagaagacttatgggactaatt-gagacactttatagttaaaggaccaaaatgaaaaccaaaaat 33458335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 293 - 364
Target Start/End: Complemental strand, 28325168 - 28325097
Alignment:
Q  293 taaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    ||||||| |||| | ||||| |||||| |||||| | |||| ||||||||||||||| | ||||||||||||    
T  28325168 taaacaaatgaatacttatgggaccaaattgagatactttaaagttaggggaccaaaattaaaaccaaaaat 28325097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 272 - 355
Target Start/End: Complemental strand, 41126356 - 41126273
Alignment:
Q  272 taacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaa 355  Q
    ||||||||| |||||||| ||  ||| || |||||  || | |||||| |||||||| |||||||||||||||||||| |||||    
T  41126356 taacggagaggaccaaaagaggtaacgacagaagacataagggaccaaattgagacactttatagttaggggaccaaaatgaaa 41126273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 314 - 364
Target Start/End: Original strand, 1904061 - 1904111
Alignment:
Q  314 gaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||||| ||||||||||||| ||||||| ||||||| ||||| ||||||||    
T  1904061 gaccaaattgagacagtttaaagttaggagaccaaattgaaatccaaaaat 1904111  T

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Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 306 - 364
Target Start/End: Complemental strand, 1970896 - 1970838
Alignment:
Q  306 atttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    ||||||| |||||| |||| ||| |||||||||| || |||||||| ||||||||||||    
T  1970896 atttatgggaccaaattgaaacactttatagttaaggaaccaaagtaaaaaccaaaaat 1970838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 314 - 356
Target Start/End: Original strand, 14109110 - 14109152
Alignment:
Q  314 gaccaatttgagacagtttatagttaggggaccaaagtgaaaa 356  Q
    ||||| ||||||||| |||||||||| ||||||||||||||||    
T  14109110 gaccagtttgagacattttatagttaagggaccaaagtgaaaa 14109152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 314 - 356
Target Start/End: Original strand, 14419067 - 14419109
Alignment:
Q  314 gaccaatttgagacagtttatagttaggggaccaaagtgaaaa 356  Q
    ||||| ||||||||| |||||||||| ||||||||||||||||    
T  14419067 gaccagtttgagacattttatagttaagggaccaaagtgaaaa 14419109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 314 - 364
Target Start/End: Original strand, 21171527 - 21171577
Alignment:
Q  314 gaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||||| |||||||| |||| ||||||||||||||| ||||| ||||||||    
T  21171527 gaccaaattgagacaatttaaagttaggggaccaaattgaaatccaaaaat 21171577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 308 - 362
Target Start/End: Complemental strand, 28648371 - 28648317
Alignment:
Q  308 ttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaa 362  Q
    |||||||||||| || |||||||||| |||||||||| |||| ||||| ||||||    
T  28648371 ttatgagaccaaattaagacagtttaaagttaggggatcaaattgaaatccaaaa 28648317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 314 - 364
Target Start/End: Original strand, 30224017 - 30224067
Alignment:
Q  314 gaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||||| |||||||| |||||||||||||||||||| ||||| || |||||    
T  30224017 gaccaaattgagacaatttatagttaggggaccaaaatgaaatccgaaaat 30224067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 314 - 364
Target Start/End: Complemental strand, 41616699 - 41616649
Alignment:
Q  314 gaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||||| |||||||| |||||||||||||||||||| ||||| || |||||    
T  41616699 gaccaaattgagacactttatagttaggggaccaaaatgaaatccgaaaat 41616649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 231 - 289
Target Start/End: Complemental strand, 43111586 - 43111528
Alignment:
Q  231 aatggttgaaattatatcagaaatgttacacattaaaaaactaacggagatgaccaaaa 289  Q
    ||||||||||||||||||| |||| |||  || ||| ||||||||||||||||| ||||    
T  43111586 aatggttgaaattatatcaaaaatattagtcaataataaactaacggagatgacaaaaa 43111528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 314 - 355
Target Start/End: Complemental strand, 1903905 - 1903864
Alignment:
Q  314 gaccaatttgagacagtttatagttaggggaccaaagtgaaa 355  Q
    |||||| ||||||||||||| ||||||||||||||| |||||    
T  1903905 gaccaaattgagacagtttaaagttaggggaccaaattgaaa 1903864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 349
Target Start/End: Original strand, 36673831 - 36673912
Alignment:
Q  268 aaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaa 349  Q
    |||||||| |||| |||||||| ||  ||| || |||||  || | |||||| |||||||| ||||||||||||||||||||    
T  36673831 aaactaactgagaggaccaaaagaggtaacgacagaagacataagggaccaaattgagacattttatagttaggggaccaaa 36673912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 364
Target Start/End: Original strand, 41516379 - 41516435
Alignment:
Q  308 ttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    ||||| |||||| || ||||| |||||||||||||||||||| | ||||| ||||||    
T  41516379 ttatgggaccaaattaagacactttatagttaggggaccaaaattaaaacaaaaaat 41516435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 364
Target Start/End: Original strand, 47809621 - 47809677
Alignment:
Q  308 ttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    ||||| |||||| ||||||||||||| ||||| ||||||||| |||||  |||||||    
T  47809621 ttatgggaccaaattgagacagtttaaagttaagggaccaaaatgaaattcaaaaat 47809677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 140; Significance: 3e-73; HSPs: 60)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 61 - 364
Target Start/End: Complemental strand, 26055231 - 26054922
Alignment:
Q  61 tatgcccatttgtaatgttggtttaattatttaataaaatgttccttttataaaa----ataaaa----tccttgaattttgtatgaatatgaagaagtg 152  Q
    |||| ||||||||||||||||||||||| ||||||||||| ||| ||||||||||    ||||||    |||||||||||||||||||||||| |||| |    
T  26055231 tatgtccatttgtaatgttggtttaattctttaataaaatattctttttataaaataaaataaaaatgttccttgaattttgtatgaatatga-gaaggg 26055133  T
Q  153 gtggacggaataagatgaagagagggnnnnnnnttatgtggtgatggttcactattgtatataacagacctgcaatcgaatggttgaaattatatcagaa 252  Q
    ||||| |||| |||||||||| ||||       ||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||| ||    
T  26055132 gtggaaggaagaagatgaagaaagggaaaaaa-ttatgtggtgatggttcactattgtatataatagacctgcaatctaatggttgaaattatatcataa 26055034  T
Q  253 atgttacacattaaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtg 352  Q
    || ||  ||||||||||||||||| ||  |||||||||||||||| || |||||||||||  ||||| |||| ||| |||||||||||||||||||| ||    
T  26055033 atatttgacattaaaaaactaacgaaggagaccaaaatagtaaacgacagaagatttatggaaccaaattgaaacactttatagttaggggaccaaaatg 26054934  T
Q  353 aaaaccaaaaat 364  Q
    ||| ||||||||    
T  26054933 aaatccaaaaat 26054922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 186 - 361
Target Start/End: Complemental strand, 9592441 - 9592266
Alignment:
Q  186 ttatgtggtgatggttcactattgtatataacagacctgcaatcgaatggttgaaattatatcagaaatgttacacattaaaaaactaacggagatgacc 285  Q
    ||||||||||||||||||| ||||||||| |   ||||||||||||||| ||||||| ||||||||||||||| ||||||||||| ||||||| |||| |    
T  9592441 ttatgtggtgatggttcaccattgtatatgatgaacctgcaatcgaatgattgaaatcatatcagaaatgttagacattaaaaaattaacggaaatgatc 9592342  T
Q  286 aaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaa 361  Q
    |||||||||||| ||  |||||||||| || ||| |||| ||| ||||||||||||||||||||||||||| ||||    
T  9592341 aaaatagtaaacgacaaaagatttatgggatcaaattgaaacactttatagttaggggaccaaagtgaaaatcaaa 9592266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 202 - 364
Target Start/End: Complemental strand, 49139988 - 49139826
Alignment:
Q  202 cactattgtatataacagacctgcaatcgaatggttgaaattatatcagaaatgttacacattaaaaaactaacggagatgaccaaaatagtaaacaact 301  Q
    |||||||  ||||||  ||||| ||||| |||| ||||||| ||||   |||| ||| |||||||||||||||||||||| |||||||||||||||  |     
T  49139988 cactattaaatataatggaccttcaatcaaatgattgaaataatatataaaatattaaacattaaaaaactaacggagattaccaaaatagtaaactgcg 49139889  T
Q  302 gaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||||||||||||||||| |||||||| |||||||||| |||||||||  |||||||||||||    
T  49139888 gaagatttatgagaccaaattgagacactttatagttatgggaccaaaacgaaaaccaaaaat 49139826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 265 - 364
Target Start/End: Complemental strand, 13641381 - 13641282
Alignment:
Q  265 aaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||||| ||||||||||||||||||||||||||  | ||||||||||| |||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  13641381 aaaaaaataacggagatgaccaaaatagtaaacggcagaagatttatgggaccaaattgagacactttatagttaggggaccaaagtgaaaaccaaaaat 13641282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 225 - 349
Target Start/End: Original strand, 36511283 - 36511407
Alignment:
Q  225 caatcgaatggttgaaattatatcagaaatgttacacattaaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttga 324  Q
    ||||| ||||| |||||| ||||  ||||| ||| |||||| ||||||||||||||||||||||||||||||| || ||||||||||| |||||| ||||    
T  36511283 caatctaatggctgaaatcatatttgaaatattatacattagaaaactaacggagatgaccaaaatagtaaacgacagaagatttatgggaccaaattga 36511382  T
Q  325 gacagtttatagttaggggaccaaa 349  Q
    |||| |||||||||| |||||||||    
T  36511383 gacactttatagttaagggaccaaa 36511407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 265 - 364
Target Start/End: Complemental strand, 47411108 - 47411009
Alignment:
Q  265 aaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||| |||||||||||||||||||||||||||| ||  ||||||||||||||||| |||||||| ||||||||||||||| |||| |||||| |||||||    
T  47411108 aaaatactaacggagatgaccaaaatagtaaacgacataagatttatgagaccaaattgagacactttatagttaggggatcaaattgaaaatcaaaaat 47411009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 265 - 364
Target Start/End: Original strand, 25787156 - 25787255
Alignment:
Q  265 aaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||| ||||||||||| |||||||||||||||   |  ||||||||||||||||| |||||||| |||||||||||||||||||| ||||||||||||||    
T  25787156 aaaatactaacggagaggaccaaaatagtaaatggcataagatttatgagaccaaattgagacactttatagttaggggaccaaattgaaaaccaaaaat 25787255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 266 - 364
Target Start/End: Original strand, 26056140 - 26056238
Alignment:
Q  266 aaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||| |||||||||| |||||||||||||||| ||  |||||||||| |||||| |||||||| |||||||||||||||||||| ||||| ||||||||    
T  26056140 aaaatctaacggagaggaccaaaatagtaaacgacaaaagatttatgggaccaaattgagacactttatagttaggggaccaaaatgaaatccaaaaat 26056238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 272 - 356
Target Start/End: Original strand, 52181304 - 52181388
Alignment:
Q  272 taacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaa 356  Q
    |||||||||||||||||||||||||||||  |||||||||||||| || |||||||| ||||||||||| |||||||| ||||||    
T  52181304 taacggagatgaccaaaatagtaaacaacataagatttatgagactaaattgagacactttatagttagaggaccaaattgaaaa 52181388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 265 - 364
Target Start/End: Complemental strand, 25786092 - 25785993
Alignment:
Q  265 aaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||| |||||| |||| |||||||||| ||||| ||  |||||||||| |||||| |||||||| |||||||||||||||||||| ||||||||||||||    
T  25786092 aaaatactaacagagaggaccaaaataataaacgacataagatttatgggaccaaattgagacactttatagttaggggaccaaattgaaaaccaaaaat 25785993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 265 - 364
Target Start/End: Original strand, 47136679 - 47136778
Alignment:
Q  265 aaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||| ||||||||||| ||||||||||||||||  |  ||||||||||| ||||| |||||||| ||||||||||||||||| || ||||||||||||||    
T  47136679 aaaatactaacggagaggaccaaaatagtaaacggcataagatttatgacaccaaattgagacactttatagttaggggacctaattgaaaaccaaaaat 47136778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 266 - 364
Target Start/End: Original strand, 14071196 - 14071294
Alignment:
Q  266 aaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||||| |||||| | ||||||||| |||||| || ||||| ||||| |||||| |||||||| ||||||||||| |||||||| ||||||||||||||    
T  14071196 aaaaacaaacggaaaggaccaaaatggtaaacgacagaagacttatgggaccaaattgagacactttatagttagaggaccaaattgaaaaccaaaaat 14071294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 271 - 364
Target Start/End: Original strand, 3979311 - 3979404
Alignment:
Q  271 ctaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||||||||| ||||||||||||||||  | ||||| ||||| |||||| |||||||| |||||||||| ||||||||| ||||| ||||||||    
T  3979311 ctaacggagaggaccaaaatagtaaacggcagaagaattatgggaccaaattgagacactttatagttaagggaccaaaatgaaatccaaaaat 3979404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 220 - 364
Target Start/End: Original strand, 50679768 - 50679912
Alignment:
Q  220 acctgcaatcgaatggttgaaattatatcagaaatgttacacattaaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaa 319  Q
    |||| ||||| || ||||||||  |||||| |||  ||| ||||||||||||||||||||| ||||| | ||||||||    ||||| ||||| ||||||    
T  50679768 acctacaatcaaacggttgaaaacatatcaaaaaatttagacattaaaaaactaacggagaggaccatattagtaaacggaggaagacttatgggaccaa 50679867  T
Q  320 tttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
     |||||||| |||||||||| ||||||||| | ||||| ||||||    
T  50679868 attgagacactttatagttaagggaccaaaataaaaactaaaaat 50679912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 266 - 364
Target Start/End: Original strand, 13930668 - 13930766
Alignment:
Q  266 aaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||||| |||||| | ||||||||| |||||| ||  |||| ||||| |||||| |||||||| ||||||||||| |||||||| ||||||||||||||    
T  13930668 aaaaacaaacggaaaggaccaaaatggtaaacgacataagacttatgggaccaaattgagacactttatagttagaggaccaaattgaaaaccaaaaat 13930766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 266 - 364
Target Start/End: Complemental strand, 21277117 - 21277019
Alignment:
Q  266 aaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    ||||||||| ||||| || |||||||||||||  | ||||||||||| |||||| |||||| | ||||||||||||  |||||| ||||||||||||||    
T  21277117 aaaaactaatggagaggatcaaaatagtaaacggcagaagatttatgggaccaaattgagatactttatagttaggcaaccaaattgaaaaccaaaaat 21277019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 219 - 364
Target Start/End: Complemental strand, 13929465 - 13929320
Alignment:
Q  219 gacctgcaatcgaatggttgaaattatatcagaaatgttacacattaaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagacca 318  Q
    ||||||| ||||||||||  |||  |||||| |||| ||| |||||||||||  |||||| | |||||| ||  |||||    ||||||||| | |||||    
T  13929465 gacctgccatcgaatggtcaaaacaatatcaaaaatattagacattaaaaaataaacggacaggaccaagatgataaacggaagaagatttacgggacca 13929366  T
Q  319 atttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    | |||||||| |||||||||| ||||||||| ||||||||||||||    
T  13929365 aattgagacactttatagttaagggaccaaattgaaaaccaaaaat 13929320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 268 - 355
Target Start/End: Complemental strand, 14390379 - 14390292
Alignment:
Q  268 aaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaa 355  Q
    ||||||||||||| ||||||||| |||||| |  |||||||||||  ||||| |||||||| ||||||||||| |||||||| |||||    
T  14390379 aaactaacggagaggaccaaaatggtaaacgaaagaagatttatggaaccaaattgagacattttatagttagaggaccaaaatgaaa 14390292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 265 - 364
Target Start/End: Complemental strand, 16217564 - 16217465
Alignment:
Q  265 aaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||| |||||||||||||||||||||||||||  ||  |||||||||  |||||| |||||||| |||||||||||  || |||| | ||||||||||||    
T  16217564 aaaatactaacggagatgaccaaaatagtaaatgacataagatttataggaccaaattgagacactttatagttagatgatcaaattaaaaaccaaaaat 16217465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 265 - 344
Target Start/End: Original strand, 16218470 - 16218549
Alignment:
Q  265 aaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttagggga 344  Q
    |||| |||||||||||||||||||||| ||||| ||  |||||||||| |||||| |||||| | |||||||||||||||    
T  16218470 aaaatactaacggagatgaccaaaatattaaacgacataagatttatgggaccaaattgagatactttatagttagggga 16218549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 266 - 349
Target Start/End: Original strand, 19466198 - 19466281
Alignment:
Q  266 aaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaa 349  Q
    |||||||||||||||  |||| |||||||||| || ||||||||||| |||||| |||||||| ||||||||||  ||||||||    
T  19466198 aaaaactaacggagagaaccacaatagtaaacgacagaagatttatgggaccaaattgagacactttatagttaaaggaccaaa 19466281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 266 - 364
Target Start/End: Complemental strand, 9633898 - 9633800
Alignment:
Q  266 aaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    ||||||||||||||| || |||||  ||||||   |||||||||||   ||||| |||||||| |||||||||| ||||||||| ||||||||||||||    
T  9633898 aaaaactaacggagaggatcaaaactgtaaacggttgaagatttatataaccaaattgagacactttatagttaagggaccaaaatgaaaaccaaaaat 9633800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 195 - 349
Target Start/End: Original strand, 14171190 - 14171344
Alignment:
Q  195 gatggttcactattgtatataacagacctgcaatcgaatggttgaaattatatcagaaatgttacacattaaaaaactaacggagatgaccaaaatagta 294  Q
    ||||||||||| || ||||| | |||||||||||| | ||||| |||| ||||||  |||  || ||||||||||| ||| ||| |||| ||||||||||    
T  14171190 gatggttcactcttatatattatagacctgcaatcaagtggttaaaataatatcaagaataatatacattaaaaaattaaaggaaatgatcaaaatagta 14171289  T
Q  295 aacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaa 349  Q
    ||  || || |||||||| |||||| |||| ||| |||||| ||| |||| ||||    
T  14171290 aatgacagatgatttatgggaccaaattgaaacattttataattaagggatcaaa 14171344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 266 - 364
Target Start/End: Original strand, 49141489 - 49141587
Alignment:
Q  266 aaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    ||||||||||||||||||| ||||| ||||||  | ||| | ||||| ||||||||||| ||| || ||||||| |||| | |||||||||||||||||    
T  49141489 aaaaactaacggagatgactaaaatggtaaacggcagaaaaattatgggaccaatttgaaacacttaatagttaagggatcgaagtgaaaaccaaaaat 49141587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 266 - 356
Target Start/End: Original strand, 52742969 - 52743059
Alignment:
Q  266 aaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaa 356  Q
    ||||||||||||||| ||||| || ||||||| ||  || |  || | ||||||||||||||| |||||||||||||||||||||||||||    
T  52742969 aaaaactaacggagaggaccataacagtaaacgacataaaacctaagggaccaatttgagacactttatagttaggggaccaaagtgaaaa 52743059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 251 - 356
Target Start/End: Complemental strand, 47560277 - 47560172
Alignment:
Q  251 aaatgttacacattaaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaag 350  Q
    |||| ||| |||| |||||| |||||||||||||||||| |||||||  | ||| |||||   || ||| |||| ||| |||||||||||||||||||||    
T  47560277 aaatattatacatcaaaaaattaacggagatgaccaaaacagtaaacggcagaatatttaaaggatcaaattgaaacactttatagttaggggaccaaag 47560178  T
Q  351 tgaaaa 356  Q
    ||||||    
T  47560177 tgaaaa 47560172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 218 - 287
Target Start/End: Complemental strand, 51217789 - 51217720
Alignment:
Q  218 agacctgcaatcgaatggttgaaattatatcagaaatgttacacattaaaaaactaacggagatgaccaa 287  Q
    |||| ||||||| ||||||||||||||||||| |||| |||  |||||||||||||||||||| ||||||    
T  51217789 agacatgcaatctaatggttgaaattatatcaaaaatattagtcattaaaaaactaacggagaggaccaa 51217720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 272 - 364
Target Start/End: Complemental strand, 3978161 - 3978069
Alignment:
Q  272 taacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    ||||||||| |||||||||||||||| || ||||| ||||| || ||| |||||||| ||||||||||  |||||||| |||||  |||||||    
T  3978161 taacggagaggaccaaaatagtaaacgacagaagaattatgggatcaaattgagacactttatagttaaaggaccaaaatgaaattcaaaaat 3978069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 266 - 349
Target Start/End: Complemental strand, 14169742 - 14169659
Alignment:
Q  266 aaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaa 349  Q
    |||||||||| || | |||||||||||||||| ||  |||||||||| |||||| |||||||| ||||||||||  ||||||||    
T  14169742 aaaaactaacagataagaccaaaatagtaaacgacaaaagatttatgggaccaaattgagacattttatagttaaaggaccaaa 14169659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 225 - 356
Target Start/End: Complemental strand, 19464764 - 19464633
Alignment:
Q  225 caatcgaatggttgaaattatatcagaaatgttacacattaaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttga 324  Q
    ||||| ||||| |||||| ||||  ||||| ||| |||||   ||||||| ||||||||||||||||||||||  | |||||||| ||  ||||| ||||    
T  19464764 caatctaatggctgaaatcatatttgaaatattatacattctcaaactaatggagatgaccaaaatagtaaacggcagaagatttgtggaaccaaattga 19464665  T
Q  325 gacagtttatagttaggggaccaaagtgaaaa 356  Q
     ||| |||||| ||| ||||||||| ||||||    
T  19464664 aacactttataattaagggaccaaactgaaaa 19464633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 266 - 349
Target Start/End: Complemental strand, 36509934 - 36509851
Alignment:
Q  266 aaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaa 349  Q
    |||||||||||||||  |||||||||||||||  | |||||||||||  ||||| |||| ||| |||||||||| |||||||||    
T  36509934 aaaaactaacggagagaaccaaaatagtaaacggcagaagatttatggaaccaaattgaaacactttatagttaagggaccaaa 36509851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 265 - 364
Target Start/End: Original strand, 47411440 - 47411539
Alignment:
Q  265 aaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||| |||||||||||  | |||||||||||||  |  |||||||||| |||||| |||||||| ||||||||||||| ||||||  ||||||| |||||    
T  47411440 aaaatactaacggagagaatcaaaatagtaaacggcataagatttatgggaccaaattgagacactttatagttagggaaccaaatggaaaaccgaaaat 47411539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 314 - 364
Target Start/End: Complemental strand, 44977296 - 44977246
Alignment:
Q  314 gaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    ||||| ||| ||||| |||||||||||||||||||||||||||||||||||    
T  44977296 gaccagtttaagacactttatagttaggggaccaaagtgaaaaccaaaaat 44977246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 225 - 290
Target Start/End: Original strand, 9210073 - 9210138
Alignment:
Q  225 caatcgaatggttgaaattatatcagaaatgttacacattaaaaaactaacggagatgaccaaaat 290  Q
    ||||| |||||||||||||||||||  ||| | | |||||||||||||||||| ||||||||||||    
T  9210073 caatcaaatggttgaaattatatcaagaatataagacattaaaaaactaacggcgatgaccaaaat 9210138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 266 - 339
Target Start/End: Original strand, 51726837 - 51726910
Alignment:
Q  266 aaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagtta 339  Q
    |||||||||||| || ||| |||||||||||| || |||||||||||  ||||| |||||||| ||||||||||    
T  51726837 aaaaactaacggtgaggactaaaatagtaaacgacagaagatttatggaaccaaattgagacactttatagtta 51726910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 320 - 364
Target Start/End: Complemental strand, 33793848 - 33793804
Alignment:
Q  320 tttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    ||||||||| |||||| ||||||||||||||||||||||||||||    
T  33793848 tttgagacactttataattaggggaccaaagtgaaaaccaaaaat 33793804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 187 - 287
Target Start/End: Original strand, 34654254 - 34654354
Alignment:
Q  187 tatgtggtgatggttcactattgtatataacagacctgcaatcgaatggttgaaattatatcagaaatgttacacattaaaaaactaacggagatgacca 286  Q
    |||||| || ||||||| | ||||||| ||  |||||||||||||||||||||||| |||| | |||| |||  |||| ||||| ||||||||| |||||    
T  34654254 tatgtgttgttggttcattgttgtatacaatggacctgcaatcgaatggttgaaatcatattaaaaatattagtcatttaaaaattaacggagaggacca 34654353  T
Q  287 a 287  Q
    |    
T  34654354 a 34654354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 272 - 364
Target Start/End: Complemental strand, 48467377 - 48467286
Alignment:
Q  272 taacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||||||||||||||||| |||||  |  | |||||||| |||||||| |||| ||| ||||||||||||| |||||| ||||||| ||||||    
T  48467377 taacggagatgaccaaaacagtaatgacat-aagatttaagagaccaaattgaaacactttatagttagggaaccaaattgaaaacaaaaaat 48467286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 268 - 364
Target Start/End: Original strand, 48935105 - 48935201
Alignment:
Q  268 aaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||||||||||||||||||||| ||  |||  | |||||  || | |||||| |||||||| |||||||||||||||||||| ||||| || |||||    
T  48935105 aaactaacggagatgaccaaaagaggtaacggcagaagacataagggaccaaattgagacactttatagttaggggaccaaaatgaaatccgaaaat 48935201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 194 - 349
Target Start/End: Original strand, 14765016 - 14765170
Alignment:
Q  194 tgatggttcactattgtatataacagacctgcaatcgaatggttgaaattatatcagaaatgttacacattaaaaaactaacggagatgaccaaaatagt 293  Q
    |||||| ||| | ||||||| ||  ||||||||||| || ||||||||| |||||| |||   || ||||| ||| ||||||||||| |||| |||||||    
T  14765016 tgatgggtcagtgttgtatacaatggacctgcaatcaaaaggttgaaatcatatcaaaaaacctaaacatt-aaatactaacggagaggaccgaaatagt 14765114  T
Q  294 aaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaa 349  Q
    ||||  |  || ||||||| |||||| |||| ||| || ||||||| |||||||||    
T  14765115 aaactgcaaaaaatttatgggaccaaattgacacacttaatagttaagggaccaaa 14765170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 223 - 349
Target Start/End: Original strand, 40110602 - 40110728
Alignment:
Q  223 tgcaatcgaatggttgaaattatatcagaaatgttacacattaaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaattt 322  Q
    ||||||| ||||||| |||| ||||||  ||| ||| |||||||||||||||| |||| ||||| | || ||||||   ||||| ||||| |||||| ||    
T  40110602 tgcaatcaaatggttaaaatcatatcaataattttatacattaaaaaactaacagagaggaccacattaataaacagaggaagacttatgggaccaaatt 40110701  T
Q  323 gagacagtttatagttaggggaccaaa 349  Q
    || ||| || ||||||| |||| ||||    
T  40110702 gacacacttaatagttaagggatcaaa 40110728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 314 - 364
Target Start/End: Complemental strand, 44979510 - 44979460
Alignment:
Q  314 gaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    ||||||||||||||| |||||||||| | ||||||||||||||| ||||||    
T  44979510 gaccaatttgagacactttatagttaagagaccaaagtgaaaacaaaaaat 44979460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 15 - 60
Target Start/End: Complemental strand, 30397538 - 30397493
Alignment:
Q  15 atgaaggcaaagaagagggatgaagatggtaataatgatggaaatg 60  Q
    |||||||| ||||||||||| || ||||||||||||||||||||||    
T  30397538 atgaaggcgaagaagagggacgaggatggtaataatgatggaaatg 30397493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 263 - 364
Target Start/End: Complemental strand, 52741614 - 52741513
Alignment:
Q  263 ttaaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaa 362  Q
    |||||||||||| ||||| |||||||| | ||||  || |||||  || | || |||||||||||| ||||||||||| |||||||| | ||||| ||||    
T  52741614 ttaaaaaactaatggagaggaccaaaacaataaatgacagaagacataagggatcaatttgagacactttatagttagaggaccaaaataaaaacgaaaa 52741515  T
Q  363 at 364  Q
    ||    
T  52741514 at 52741513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 268 - 364
Target Start/End: Original strand, 2237973 - 2238069
Alignment:
Q  268 aaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    ||||||||||||| |||||||| ||  ||| || |||||  || | |||||| |||||||| |||||||||| ||||||||| ||||| || |||||    
T  2237973 aaactaacggagaggaccaaaagaggtaacgacagaagacataagggaccaaattgagacactttatagttatgggaccaaaatgaaatccgaaaat 2238069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 268 - 364
Target Start/End: Complemental strand, 34531784 - 34531688
Alignment:
Q  268 aaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    ||||| ||||||| |||||||| ||  ||| || |||||  || |||||||| |||||||| ||||||||||| |||||||| ||||| || |||||    
T  34531784 aaacttacggagaggaccaaaagagataacgacagaagacataagagaccaaattgagacattttatagttagaggaccaaaatgaaatccgaaaat 34531688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 364
Target Start/End: Original strand, 47512119 - 47512175
Alignment:
Q  308 ttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||||||||||| ||||||||||||| ||||| ||||||||| |||||  |||||||    
T  47512119 ttatgagaccaaattgagacagtttaaagttaagggaccaaaatgaaattcaaaaat 47512175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 321 - 364
Target Start/End: Complemental strand, 34653503 - 34653460
Alignment:
Q  321 ttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||||||| |||||||||| |||||||||||||||||| |||||    
T  34653503 ttgagacactttatagttaagggaccaaagtgaaaaccgaaaat 34653460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 266 - 349
Target Start/End: Complemental strand, 40811318 - 40811235
Alignment:
Q  266 aaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaa 349  Q
    |||||||||||||||||||||||||| |||||  |  |||| ||||| || ||| |||||||| || ||||||| |||| ||||    
T  40811318 aaaaactaacggagatgaccaaaataataaacggcaaaagagttatgggatcaaattgagacatttaatagttaagggatcaaa 40811235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 314 - 364
Target Start/End: Complemental strand, 2236888 - 2236838
Alignment:
Q  314 gaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||||| |||||||| |||||||||||||||||||| ||||| || |||||    
T  2236888 gaccaaattgagacactttatagttaggggaccaaaatgaaatccgaaaat 2236838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 286
Target Start/End: Complemental strand, 33941486 - 33941420
Alignment:
Q  220 acctgcaatcgaatggttgaaattatatcagaaatgttacacattaaaaaactaacggagatgacca 286  Q
    |||||||||| || |||| |||| |||| | |||||||| |||||||||||||||| |||| |||||    
T  33941486 acctgcaatcaaacggttaaaatcatattaaaaatgttagacattaaaaaactaacagagaggacca 33941420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 314 - 364
Target Start/End: Complemental strand, 35683130 - 35683080
Alignment:
Q  314 gaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||||| |||||||| |||||||||||||||||||| ||||| || |||||    
T  35683130 gaccaaattgagacactttatagttaggggaccaaaatgaaatccgaaaat 35683080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 314 - 364
Target Start/End: Complemental strand, 48934316 - 48934266
Alignment:
Q  314 gaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||||| |||||||| |||||||||||||||||||| ||||| || |||||    
T  48934316 gaccaaattgagacactttatagttaggggaccaaaatgaaatccgaaaat 48934266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 126 - 172
Target Start/End: Complemental strand, 49140067 - 49140021
Alignment:
Q  126 tgaattttgtatgaatatgaagaagtggtggacggaataagatgaag 172  Q
    |||||||  ||||||||||||||||||||||| |||| |||||||||    
T  49140067 tgaatttgatatgaatatgaagaagtggtggaaggaagaagatgaag 49140021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 266 - 319
Target Start/End: Complemental strand, 14764352 - 14764299
Alignment:
Q  266 aaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaa 319  Q
    |||||||||| |||||||| |||| ||||||| || ||||| ||||||||||||    
T  14764352 aaaaactaacagagatgactaaaacagtaaacgacagaagacttatgagaccaa 14764299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 308 - 349
Target Start/End: Original strand, 32823576 - 32823617
Alignment:
Q  308 ttatgagaccaatttgagacagtttatagttaggggaccaaa 349  Q
    ||||| |||||| ||||||||||||| |||||||||||||||    
T  32823576 ttatgggaccaaattgagacagtttaaagttaggggaccaaa 32823617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 349
Target Start/End: Original strand, 35684198 - 35684278
Alignment:
Q  268 aaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaa 349  Q
    ||||||||||||| |||||||| ||  ||| || |||||  || | |||||| |||||||| ||||||||||||||||||||    
T  35684198 aaactaacggagaggaccaaaagaggtaacgacagaagacataagggaccaaattgagaca-tttatagttaggggaccaaa 35684278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 356
Target Start/End: Complemental strand, 2971780 - 2971732
Alignment:
Q  308 ttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaa 356  Q
    ||||| |||||| |||||||| ||||||||||| |||| ||||||||||    
T  2971780 ttatgggaccaaattgagacactttatagttagaggactaaagtgaaaa 2971732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 364
Target Start/End: Original strand, 27114844 - 27114900
Alignment:
Q  308 ttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||||||||||| ||||||| ||||| ||||| ||||||||| |||||  |||||||    
T  27114844 ttatgagaccaaattgagacggtttaaagttaagggaccaaaatgaaattcaaaaat 27114900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 364
Target Start/End: Original strand, 32824169 - 32824225
Alignment:
Q  308 ttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||||||||||| ||||||| ||||| ||||| ||||||||| |||||  |||||||    
T  32824169 ttatgagaccaaattgagacggtttaaagttaagggaccaaaatgaaattcaaaaat 32824225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 138; Significance: 5e-72; HSPs: 64)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 126 - 364
Target Start/End: Complemental strand, 37275150 - 37274912
Alignment:
Q  126 tgaattttgtatgaatatgaagaagtggtggacggaataagatgaagagagggnnnnnnnttatgtggtgatggttcactattgtatataacagacctgc 225  Q
    |||||||||||||||||||||||||||||||| |||| |||||||||||||||       |||||||||||||||||||| |||||||||   ||| |||    
T  37275150 tgaattttgtatgaatatgaagaagtggtggaaggaagaagatgaagagagggaaaaaaattatgtggtgatggttcactgttgtatatattggacatgc 37275051  T
Q  226 aatcgaatggttgaaattatatcagaaatgttacacattaaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgag 325  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| ||||||||||||||||  | ||||||||||| || ||| |||||    
T  37275050 aatcgaatggttgaaatcatatcagaaatgttatacattaaaaaactaacggagaggaccaaaatagtaaacggcagaagatttatgggaacaaattgag 37274951  T
Q  326 acagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    ||| ||||||||||| |||||||| ||||| ||||||||    
T  37274950 acactttatagttagaggaccaaaatgaaatccaaaaat 37274912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 197 - 364
Target Start/End: Original strand, 36939957 - 36940124
Alignment:
Q  197 tggttcactattgtatataacagacctgcaatcgaatggttgaaattatatcagaaatgttacacattaaaaaactaacggagatgaccaaaatagtaaa 296  Q
    |||||||||||| |||| ||  |||||||||||||||||||||||  |||||| || | ||| | ||||||||| |||||||||||||||||||||||||    
T  36939957 tggttcactattatatacaatggacctgcaatcgaatggttgaaaccatatcaaaattattagatattaaaaaattaacggagatgaccaaaatagtaaa 36940056  T
Q  297 caactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |  | |||||||||||| ||||| |||| ||| ||||||||||||||| |||||||||||||||||||    
T  36940057 cggcagaagatttatgataccaaattgaaacactttatagttaggggatcaaagtgaaaaccaaaaat 36940124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 141 - 364
Target Start/End: Original strand, 29739511 - 29739734
Alignment:
Q  141 tatgaagaagtggtggacggaataagatgaagagagggnnnnnnnttatgtggtgatggttcactattgtatataacagacctgcaatcgaatggttgaa 240  Q
    ||||||||||||||||| |||| |||||||||| |||        ||| ||| || ||||||| | | ||||||||  ||||| |||||||| ||| |||    
T  29739511 tatgaagaagtggtggaaggaagaagatgaagaaaggaaaaaaaattaggtgttggtggttcagtgtggtatataatggacctacaatcgaacggtcgaa 29739610  T
Q  241 attatatcagaaatgttacacattaaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttag 340  Q
    |  |||||| |||| ||| |||||||||||| |||||| ||||||||||| ||||||    ||| ||||||| |||||| |||||||| |||||||||||    
T  29739611 aacatatcaaaaatattaaacattaaaaaacaaacggacatgaccaaaatggtaaacggaagaaaatttatgggaccaaattgagacactttatagttag 29739710  T
Q  341 gggaccaaagtgaaaaccaaaaat 364  Q
    |||| |||| ||||||||||||||    
T  29739711 gggatcaaattgaaaaccaaaaat 29739734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 260 - 364
Target Start/End: Complemental strand, 24068459 - 24068355
Alignment:
Q  260 acattaaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaacca 359  Q
    ||||||||||||||||||||| ||||||| ||||||||    ||||| ||||| |||||| |||||||| |||||||||||||||||||| |||||||||    
T  24068459 acattaaaaaactaacggagaggaccaaattagtaaacggaggaagacttatgggaccaaattgagacactttatagttaggggaccaaaatgaaaacca 24068360  T
Q  360 aaaat 364  Q
    |||||    
T  24068359 aaaat 24068355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 211 - 339
Target Start/End: Complemental strand, 34616312 - 34616179
Alignment:
Q  211 atataacagacctgcaatcgaatggttgaaattatatcagaaatgttacacattaaaaaactaacggagatgaccaaaatagtaaac-----aactgaag 305  Q
    |||||| ||||||||||||||||||||||||| |||| | |||| ||| ||||||||||||||||||| ||||||||||| ||||||     ||   |||    
T  34616312 atataatagacctgcaatcgaatggttgaaatcatattaaaaatattaaacattaaaaaactaacggaaatgaccaaaatggtaaacgacaaaagaaaag 34616213  T
Q  306 atttatgagaccaatttgagacagtttatagtta 339  Q
    ||||||| |||||| |||||||| ||||||||||    
T  34616212 atttatgggaccaaattgagacactttatagtta 34616179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 219 - 364
Target Start/End: Original strand, 35945383 - 35945528
Alignment:
Q  219 gacctgcaatcgaatggttgaaattatatcagaaatgttacacattaaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagacca 318  Q
    |||||||||||||||||||||||| | |||| |||| ||| |||||||||||||||   ||  ||||||||||||||||  | |||||| |||| |||||    
T  35945383 gacctgcaatcgaatggttgaaatcacatcaaaaatattaaacattaaaaaactaatccaggggaccaaaatagtaaactgcagaagatatatgggacca 35945482  T
Q  319 atttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |  ||||||| |||||||||| ||||| ||| ||||||| ||||||    
T  35945483 aagtgagacattttatagttaagggactaaaatgaaaacaaaaaat 35945528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 269 - 364
Target Start/End: Original strand, 16363808 - 16363903
Alignment:
Q  269 aactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||||||||||| ||||||||||||||||| | || |||||||| || ||| |||||| | ||||||||||| |||||||||||||||||||||||    
T  16363808 aactaacggagaggaccaaaatagtaaacagcagacgatttatgggatcaaattgagatactttatagttagaggaccaaagtgaaaaccaaaaat 16363903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 270 - 364
Target Start/End: Complemental strand, 36070297 - 36070203
Alignment:
Q  270 actaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||||||| || ||||||||||||||||  | ||||||||||| || ||| |||||||| |||||||||||||||||||| ||||||||||||||    
T  36070297 actaacggggaggaccaaaatagtaaacggcagaagatttatgggatcaaattgagacactttatagttaggggaccaaattgaaaaccaaaaat 36070203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 207 - 347
Target Start/End: Original strand, 13514799 - 13514939
Alignment:
Q  207 ttgtatataacagacctgcaatcgaatggttgaaattatatcagaaatgttacacattaaaaaactaacggagatgaccaaaatagtaaacaactgaaga 306  Q
    ||||||| || |||| ||||||||||||||| ||||||||||| |||  |||  ||||||||||||||||||||||||||||| ||  ||||   |||||    
T  13514799 ttgtatacaatagacatgcaatcgaatggtttaaattatatcaaaaacattagtcattaaaaaactaacggagatgaccaaaagaggtaacagaagaaga 13514898  T
Q  307 tttatgagaccaatttgagacagtttatagttaggggacca 347  Q
      || | ||||||||||||||  ||| ||||||||||||||    
T  13514899 cataagggaccaatttgagacgttttttagttaggggacca 13514939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 207 - 347
Target Start/End: Original strand, 13604332 - 13604472
Alignment:
Q  207 ttgtatataacagacctgcaatcgaatggttgaaattatatcagaaatgttacacattaaaaaactaacggagatgaccaaaatagtaaacaactgaaga 306  Q
    ||||||| || |||| ||||||||||||||| ||||||||||| |||  |||  ||||||||||||||||||||||||||||| ||  ||||   |||||    
T  13604332 ttgtatacaatagacatgcaatcgaatggtttaaattatatcaaaaacattagtcattaaaaaactaacggagatgaccaaaagaggtaacagaagaaga 13604431  T
Q  307 tttatgagaccaatttgagacagtttatagttaggggacca 347  Q
      || | ||||||||||||||  ||| ||||||||||||||    
T  13604432 cataagggaccaatttgagacgttttttagttaggggacca 13604472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 272 - 364
Target Start/End: Original strand, 31625383 - 31625475
Alignment:
Q  272 taacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    ||||||||| ||||||||||||||||  |  |||||||||| |||||| |||||||| |||||| ||||||||||||| ||||||||||||||    
T  31625383 taacggagaggaccaaaatagtaaacggcaaaagatttatgggaccaaattgagacactttataattaggggaccaaattgaaaaccaaaaat 31625475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 209 - 364
Target Start/End: Original strand, 19914842 - 19914997
Alignment:
Q  209 gtatataacagacctgcaatcgaatggttgaaattatatcagaaatgttacacattaaaaaactaacggagatgaccaaaatagtaaacaactgaagatt 308  Q
    ||||||||  ||||||||||| ||||||   ||| |||||| |||| ||| ||||||| |||| |||||| ||||||||||| ||||||    |||||||    
T  19914842 gtatataatggacctgcaatcaaatggtcacaataatatcaaaaatattagacattaataaacaaacggatatgaccaaaatggtaaacggtagaagatt 19914941  T
Q  309 tatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||| |  ||| |||||||| |||||||||| ||||||||| |||||||| |||||    
T  19914942 tatgggtacaaattgagacactttatagttaagggaccaaattgaaaacccaaaat 19914997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 266 - 364
Target Start/End: Complemental strand, 35944031 - 35943932
Alignment:
Q  266 aaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagaca-gtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    ||||||||||||||||||||||||||||||||  |  |||||||||| |||||| ||||||||  |||||| ||| ||||||||| ||||||||||||||    
T  35944031 aaaaactaacggagatgaccaaaatagtaaactgcataagatttatgggaccaaattgagacatttttataattaagggaccaaaatgaaaaccaaaaat 35943932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 266 - 364
Target Start/End: Complemental strand, 117171 - 117073
Alignment:
Q  266 aaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    ||||||||||||||| |||||||| | ||||| || ||||||||||| || ||| |||| ||| |||||| ||||||||||||| ||||||||||||||    
T  117171 aaaaactaacggagaggaccaaaacaataaacgacagaagatttatgggatcaaattgaaacattttataattaggggaccaaaatgaaaaccaaaaat 117073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 266 - 364
Target Start/End: Complemental strand, 7486200 - 7486102
Alignment:
Q  266 aaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    ||||||||||||||| ||||||||||||||||| |  |||||||||| |||||| ||||  || |||||||||| |||| |||| ||||||||||||||    
T  7486200 aaaaactaacggagaggaccaaaatagtaaacagcaaaagatttatgggaccaaattgaagcactttatagttaagggatcaaaatgaaaaccaaaaat 7486102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 266 - 356
Target Start/End: Original strand, 13367043 - 13367133
Alignment:
Q  266 aaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaa 356  Q
    ||||||||||||||| ||||||||||||||||  | ||||||||||| |||||| || | ||| |||||||||| ||||||||||||||||    
T  13367043 aaaaactaacggagaggaccaaaatagtaaacggcagaagatttatgggaccaaattaaaacactttatagttaagggaccaaagtgaaaa 13367133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 266 - 364
Target Start/End: Complemental strand, 36756187 - 36756089
Alignment:
Q  266 aaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||||||||||||||||||||||||||||||| ||  |||||||||| |||||  |||| ||| |||||||||| ||||||||| | ||||| ||||||    
T  36756187 aaaaactaacggagatgaccaaaatagtaaacgacataagatttatgtgaccagattgaaacactttatagttatgggaccaaattaaaaactaaaaat 36756089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 266 - 364
Target Start/End: Complemental strand, 44606262 - 44606164
Alignment:
Q  266 aaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    ||||||||| ||||| || ||||||| ||||||   ||||||||||| |||||| |||| ||| | |||||||||||||||||||||||||||||||||    
T  44606262 aaaaactaatggagaggatcaaaataataaacagaagaagatttatgggaccaaattgaaacactatatagttaggggaccaaagtgaaaaccaaaaat 44606164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 272 - 364
Target Start/End: Complemental strand, 31624023 - 31623931
Alignment:
Q  272 taacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    ||||||||| ||| |||||| ||||| ||  |||||||||| |||||| |||| ||| |||||||||||||||||||| ||||||||||||||    
T  31624023 taacggagaggactaaaataataaacgacataagatttatgggaccaaattgaaacactttatagttaggggaccaaattgaaaaccaaaaat 31623931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 276 - 364
Target Start/End: Original strand, 38591010 - 38591098
Alignment:
Q  276 ggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    ||||| ||||||||||||||||  |  |||||||||| |||||| |||||||| |||||||||||||||||||| |||||| |||||||    
T  38591010 ggagaggaccaaaatagtaaacggcataagatttatgggaccaaattgagacactttatagttaggggaccaaattgaaaatcaaaaat 38591098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 219 - 292
Target Start/End: Original strand, 8397204 - 8397277
Alignment:
Q  219 gacctgcaatcgaatggttgaaattatatcagaaatgttacacattaaaaaactaacggagatgaccaaaatag 292  Q
    ||||||||||| ||||||||||||||||||| |||| |||  ||||| ||||||||||||||||||||| ||||    
T  8397204 gacctgcaatcaaatggttgaaattatatcaaaaatattaatcattataaaactaacggagatgaccaagatag 8397277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 220 - 289
Target Start/End: Complemental strand, 16362588 - 16362519
Alignment:
Q  220 acctgcaatcgaatggttgaaattatatcagaaatgttacacattaaaaaactaacggagatgaccaaaa 289  Q
    ||||||||||||| ||||||||| |||||| |||| ||| ||||||||||||||||||||| ||||||||    
T  16362588 acctgcaatcgaacggttgaaatcatatcaaaaatattagacattaaaaaactaacggagaggaccaaaa 16362519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 265 - 364
Target Start/End: Complemental strand, 3237541 - 3237443
Alignment:
Q  265 aaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||| ||||||||| |||| |||||| ||||||  | ||| ||||||| |||||| ||||||||||||| ||||||||||||||| ||||| ||||||||    
T  3237541 aaaatactaacggaaatgatcaaaattgtaaacggcagaatatttatgggaccaaattgagacagtttaaagttaggggaccaaa-tgaaatccaaaaat 3237443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 265 - 364
Target Start/End: Original strand, 27750613 - 27750712
Alignment:
Q  265 aaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||| ||||||||||| ||||||||||||||||||   |||||||||| |||||| |||||| | |||||| |||  ||| |||| ||||||||||||||    
T  27750613 aaaatactaacggagaagaccaaaatagtaaacaatataagatttatgggaccaaattgagatactttataattaacggatcaaattgaaaaccaaaaat 27750712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 266 - 357
Target Start/End: Original strand, 39546670 - 39546761
Alignment:
Q  266 aaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaac 357  Q
    ||||||||||||||||||||||||  ||||||  |  || ||||||| |||||| |||||||| |||| |||||||| ||||||||||||||    
T  39546670 aaaaactaacggagatgaccaaaacggtaaacggcataatatttatgggaccaaattgagacactttaaagttagggaaccaaagtgaaaac 39546761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 265 - 364
Target Start/End: Original strand, 41867908 - 41868007
Alignment:
Q  265 aaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||| ||||||||||| ||| ||||||  ||||  |  || ||||||| |||||| |||||||| |||||||||||||||||||||||||||| ||||||    
T  41867908 aaaatactaacggagaggactaaaataaaaaacggcataaaatttatgggaccaaattgagacactttatagttaggggaccaaagtgaaaactaaaaat 41868007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 266 - 364
Target Start/End: Original strand, 37276236 - 37276334
Alignment:
Q  266 aaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||||||||| |||| |||||| ||| |||||  |  |||||||||| |||||| |||||||| |||||||||| |||| ||||||||||| |||||||    
T  37276236 aaaaactaacagagaggaccaatataataaacggcaaaagatttatgggaccaaattgagacactttatagttaagggatcaaagtgaaaatcaaaaat 37276334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 302 - 364
Target Start/End: Original strand, 37324717 - 37324779
Alignment:
Q  302 gaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||||||| ||||||||| |||||||| |||||||||||||||||||| | ||||||||||||    
T  37324717 gaagatttttgagaccaaattgagacattttatagttaggggaccaaattaaaaaccaaaaat 37324779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 302 - 364
Target Start/End: Original strand, 43386731 - 43386793
Alignment:
Q  302 gaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    ||||| ||||| |||||| |||||||| |||||||||||||||||||| ||||||||||||||    
T  43386731 gaagagttatgggaccaaattgagacattttatagttaggggaccaaactgaaaaccaaaaat 43386793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 231 - 364
Target Start/End: Complemental strand, 38142 - 38010
Alignment:
Q  231 aatggttgaaattatatcagaaatgttacacattaaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagt 330  Q
    ||||||| |||| |||||| |||  ||| |||||||||| |||||||||| ||||| ||||||||||    ||||| |||||||||||| || | ||| |    
T  38142 aatggttaaaatcatatcaaaaaatttagacattaaaaa-ctaacggagaggaccacaatagtaaacggaggaagacttatgagaccaaattcaaacact 38044  T
Q  331 ttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    ||||||||||||||| ||| | ||||| ||||||    
T  38043 ttatagttaggggactaaaattaaaacaaaaaat 38010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 273 - 362
Target Start/End: Complemental strand, 38589936 - 38589847
Alignment:
Q  273 aacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaa 362  Q
    |||| |||||| ||||||||||||| ||  |||||||||| |||||| ||||| || ||||||||||| |||||||| ||||||| ||||    
T  38589936 aacgaagatgatcaaaatagtaaacgacataagatttatgggaccaaattgagccactttatagttagaggaccaaattgaaaacaaaaa 38589847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 265 - 349
Target Start/End: Original strand, 43277913 - 43277997
Alignment:
Q  265 aaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaa 349  Q
    |||| ||| ||||| ||||||||||||||||||  |  |||||||| | |||||| |||||||| ||||||||||||||||||||    
T  43277913 aaaatactgacggacatgaccaaaatagtaaacggcataagatttacgggaccaaattgagacattttatagttaggggaccaaa 43277997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 265 - 356
Target Start/End: Original strand, 1570198 - 1570289
Alignment:
Q  265 aaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaa 356  Q
    |||| ||||||||||||||||||||||||||||  |  || |||||  ||||||| |||||||| |||||||||| | ||||||| ||||||    
T  1570198 aaaatactaacggagatgaccaaaatagtaaacggcataaaatttaatagaccaaattgagacactttatagttatgagaccaaattgaaaa 1570289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 265 - 364
Target Start/End: Complemental strand, 41867018 - 41866919
Alignment:
Q  265 aaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||| |||||| ||||||||||||||||||||   |  || ||||||| |||||| |||| ||| |||||||||| |||| ||||||||||| |||||||    
T  41867018 aaaatactaacagagatgaccaaaatagtaaatggcgtaaaatttatgggaccaaattgaaacactttatagttaagggatcaaagtgaaaatcaaaaat 41866919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 314 - 364
Target Start/End: Original strand, 10053785 - 10053835
Alignment:
Q  314 gaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||||| |||||||| |||||||||| ||||||||||||||||||||||||    
T  10053785 gaccaacttgagacactttatagttaagggaccaaagtgaaaaccaaaaat 10053835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 266 - 364
Target Start/End: Complemental strand, 19913615 - 19913517
Alignment:
Q  266 aaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    ||||||||||||||| |||||||||  |||||  | ||||| ||||| |||||| |||| ||| ||||||||||| |||||||| |||||  |||||||    
T  19913615 aaaaactaacggagaggaccaaaatgataaaccgcagaagacttatgggaccaaattgaaacactttatagttagaggaccaaattgaaattcaaaaat 19913517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 314 - 364
Target Start/End: Complemental strand, 21267239 - 21267189
Alignment:
Q  314 gaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||||| |||||||| ||||||||||| |||||||||||||||||||||||    
T  21267239 gaccaaattgagacactttatagttagaggaccaaagtgaaaaccaaaaat 21267189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 282 - 364
Target Start/End: Original strand, 24069455 - 24069537
Alignment:
Q  282 gaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    ||||||||| ||||||  | ||||| ||||| |||||| |||||||| |||||||||| |||| |||| ||||||||||||||    
T  24069455 gaccaaaatggtaaacggcagaagagttatgggaccaaattgagacactttatagttaagggatcaaaatgaaaaccaaaaat 24069537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 302 - 364
Target Start/End: Complemental strand, 37323435 - 37323373
Alignment:
Q  302 gaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    ||||||||||| || ||| |||||||| ||||||||||||| |||||| ||||||||||||||    
T  37323435 gaagatttatgggatcaaattgagacattttatagttagggaaccaaattgaaaaccaaaaat 37323373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 282 - 364
Target Start/End: Complemental strand, 37472510 - 37472428
Alignment:
Q  282 gaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    ||||||||| |||||| ||  |||| ||||| |||||| |||||||| ||||||||||| |||||||| | ||||||||||||    
T  37472510 gaccaaaatggtaaacgacaaaagacttatgggaccaaattgagacactttatagttagaggaccaaattaaaaaccaaaaat 37472428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 197 - 291
Target Start/End: Original strand, 40251280 - 40251374
Alignment:
Q  197 tggttcactattgtatataacagacctgcaatcgaatggttgaaattatatcagaaatgttacacattaaaaaactaacggagatgaccaaaata 291  Q
    ||||||| | ||||| | || ||||||||||| ||||||||||||| |||||| |||| ||| ||||||||||| |||  |||| ||||||||||    
T  40251280 tggttcagtgttgtacacaatagacctgcaattgaatggttgaaatcatatcaaaaatattagacattaaaaaattaattgagaggaccaaaata 40251374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 266 - 339
Target Start/End: Complemental strand, 20308728 - 20308655
Alignment:
Q  266 aaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagtta 339  Q
    ||||| ||| ||| |||||||||||||||||| || ||||| |||||||||||| |||||||| || |||||||    
T  20308728 aaaaattaatggaaatgaccaaaatagtaaacgacagaagagttatgagaccaaattgagacacttaatagtta 20308655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 266 - 339
Target Start/End: Complemental strand, 21095361 - 21095288
Alignment:
Q  266 aaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagtta 339  Q
    ||||| ||| ||| |||||||||||||||||| || ||||| |||||||||||| |||||||| || |||||||    
T  21095361 aaaaattaatggaaatgaccaaaatagtaaacgacagaagagttatgagaccaaattgagacacttaatagtta 21095288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 303 - 364
Target Start/End: Complemental strand, 39515285 - 39515224
Alignment:
Q  303 aagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||| |||||||||||| |||||||| |||||||| |||||| |||| ||||||||||||||    
T  39515285 aagagttatgagaccaaattgagacactttatagtcaggggatcaaaatgaaaaccaaaaat 39515224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 266 - 349
Target Start/End: Complemental strand, 8095469 - 8095386
Alignment:
Q  266 aaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaa 349  Q
    ||||||||||||| | |||||||||||||||| ||  |||| | ||| |||||| |||||||| || ||||||| |||||||||    
T  8095469 aaaaactaacggaaaggaccaaaatagtaaacgacaaaagagtaatgggaccaaattgagacacttaatagttaagggaccaaa 8095386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 265 - 364
Target Start/End: Complemental strand, 43275874 - 43275775
Alignment:
Q  265 aaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||| |||||||| || |||||||||| |||||  |  |||| ||||| ||| || |||||||| ||||||||||||| |||||| ||||||| ||||||    
T  43275874 aaaatactaacggtgaggaccaaaataataaacggcataagagttatgggactaaattgagacactttatagttagggaaccaaattgaaaacaaaaaat 43275775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 314 - 356
Target Start/End: Complemental strand, 10052179 - 10052137
Alignment:
Q  314 gaccaatttgagacagtttatagttaggggaccaaagtgaaaa 356  Q
    ||||||||||||||| |||||| ||||||||||||||||||||    
T  10052179 gaccaatttgagacactttataattaggggaccaaagtgaaaa 10052137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 306 - 364
Target Start/End: Original strand, 12281812 - 12281870
Alignment:
Q  306 atttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    ||||| ||||| || |||||||| |||||||||| |||||||||||||||| |||||||    
T  12281812 atttacgagacaaaattgagacaatttatagttacgggaccaaagtgaaaatcaaaaat 12281870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 303 - 349
Target Start/End: Original strand, 36757260 - 36757306
Alignment:
Q  303 aagatttatgagaccaatttgagacagtttatagttaggggaccaaa 349  Q
    ||||||||||||||||| |||||||  ||||||||||||||||||||    
T  36757260 aagatttatgagaccaaattgagacgttttatagttaggggaccaaa 36757306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 289
Target Start/End: Complemental strand, 39323969 - 39323887
Alignment:
Q  207 ttgtatataacagacctgcaatcgaatggttgaaattatatcagaaatgttacacattaaaaaactaacggagatgaccaaaa 289  Q
    ||||||| || |||| ||||||| ||||||| ||||||||||| |||| ||| |  || ||||||||||||||| ||||||||    
T  39323969 ttgtatacaatagacatgcaatctaatggttaaaattatatcaaaaatattagatcttgaaaaactaacggagaggaccaaaa 39323887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 303 - 364
Target Start/End: Complemental strand, 14820279 - 14820218
Alignment:
Q  303 aagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||||||||| ||| || |||||||| |||||||||||||||||||| | ||| ||||||||    
T  14820279 aagatttatgggactaaattgagacactttatagttaggggaccaaattaaaatccaaaaat 14820218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 135 - 289
Target Start/End: Complemental strand, 44102202 - 44102049
Alignment:
Q  135 tatgaatatgaagaagtggtggacggaataagatgaagagagggnnnnnnnttatgtggtgatggttcactattgtatataacagacctgcaatcgaatg 234  Q
    |||||||||||||||||| |||| | || |||||||||| ||||       ||| ||| || ||| ||| | ||||| | || |||| ||||||| ||||    
T  44102202 tatgaatatgaagaagtgatggaagaaagaagatgaagaaagggaaaaaa-ttaagtgttggtggctcattgttgtacacaatagacatgcaatccaatg 44102104  T
Q  235 gttgaaattatatcagaaatgttacacattaaaaaactaacggagatgaccaaaa 289  Q
    ||||| ||||||| | |||| |||  ||||||||||||||| |||| ||||||||    
T  44102103 gttgagattatataaaaaatattagtcattaaaaaactaacagagaggaccaaaa 44102049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 126 - 173
Target Start/End: Complemental strand, 34616397 - 34616350
Alignment:
Q  126 tgaattttgtatgaatatgaagaagtggtggacggaataagatgaaga 173  Q
    ||||||| ||||||||||||||||||||| || |||| ||||||||||    
T  34616397 tgaatttggtatgaatatgaagaagtggtagaaggaagaagatgaaga 34616350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 314 - 364
Target Start/End: Complemental strand, 7561874 - 7561824
Alignment:
Q  314 gaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    ||||||||||||||| |||| ||||| ||||||||| ||||| ||||||||    
T  7561874 gaccaatttgagacaatttaaagttaagggaccaaattgaaatccaaaaat 7561824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 314 - 364
Target Start/End: Complemental strand, 14433697 - 14433647
Alignment:
Q  314 gaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||||| ||||||||||||| ||||||||||||||| |||||  |||||||    
T  14433697 gaccaaattgagacagtttaaagttaggggaccaaattgaaattcaaaaat 14433647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 138 - 172
Target Start/End: Original strand, 35945302 - 35945336
Alignment:
Q  138 gaatatgaagaagtggtggacggaataagatgaag 172  Q
    |||||||||||||||||||| ||||||||||||||    
T  35945302 gaatatgaagaagtggtggaaggaataagatgaag 35945336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 266 - 355
Target Start/End: Original strand, 39196 - 39285
Alignment:
Q  266 aaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaa 355  Q
    |||||||||| |||| ||||||||| |  ||| |||| | | ||| | |||||| |||| |||||||| ||||||||||||||| |||||    
T  39196 aaaaactaaccgagaggaccaaaatgggtaacgactgtatacttaggggaccaaattgaaacagtttaaagttaggggaccaaattgaaa 39285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 266 - 319
Target Start/End: Complemental strand, 36938804 - 36938751
Alignment:
Q  266 aaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaa 319  Q
    ||||| |||| |||| ||||||||||||||||  | ||||||||||||||||||    
T  36938804 aaaaattaacagagaagaccaaaatagtaaacggcagaagatttatgagaccaa 36938751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 292
Target Start/End: Original strand, 38790179 - 38790272
Alignment:
Q  199 gttcactattgtatataacagacctgcaatcgaatggttgaaattatatcagaaatgttacacattaaaaaactaacggagatgaccaaaatag 292  Q
    |||||||||| |||| ||  || ||||||||| ||||||||| | ||||||  | | ||| ||||||||||| ||||||||||||  |||||||    
T  38790179 gttcactattatatacaatggatctgcaatcggatggttgaagtcatatcaacattattagacattaaaaaattaacggagatgattaaaatag 38790272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 364
Target Start/End: Complemental strand, 4807483 - 4807391
Alignment:
Q  272 taacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||||||||  ||||||||| |||||  |  |||||||||| |||||| |||| | |  ||||||||||||||||||| | |||| |||||||    
T  4807483 taacggagagaaccaaaataataaacggcgtaagatttatgggaccaaattgaaaaacgttatagttaggggaccaaattaaaaatcaaaaat 4807391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 276 - 349
Target Start/End: Complemental strand, 6843870 - 6843795
Alignment:
Q  276 ggagatgaccaaaatagtaaaca--actgaagatttatgagaccaatttgagacagtttatagttaggggaccaaa 349  Q
    |||||||||||||| ||  ||||  || |||||| || | |||||| |||||||| ||||||||||||||||||||    
T  6843870 ggagatgaccaaaagaggtaacacgacagaagatataggggaccaaattgagacactttatagttaggggaccaaa 6843795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 324 - 364
Target Start/End: Original strand, 7487438 - 7487478
Alignment:
Q  324 agacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    ||||| ||||||||||||||| |||||||||||| ||||||    
T  7487438 agacattttatagttaggggatcaaagtgaaaacgaaaaat 7487478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 269 - 357
Target Start/End: Original strand, 36071374 - 36071462
Alignment:
Q  269 aactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaac 357  Q
    ||||||| ||||||||||||||  |||||    ||||| ||||| ||||||||||| | | | |||||||| ||||||||| |||||||    
T  36071374 aactaacagagatgaccaaaatgataaacggtagaagagttatgggaccaatttgaaatactctatagttaagggaccaaattgaaaac 36071462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 126 - 154
Target Start/End: Complemental strand, 39324056 - 39324028
Alignment:
Q  126 tgaattttgtatgaatatgaagaagtggt 154  Q
    |||||||||||||||||||||||||||||    
T  39324056 tgaattttgtatgaatatgaagaagtggt 39324028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 131; Significance: 7e-68; HSPs: 67)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 61 - 364
Target Start/End: Original strand, 11220441 - 11220749
Alignment:
Q  61 tatgcccatttgtaatgttggtttaattatttaataaaatgttccttttataaaaataaaa-------tccttgaattttgtatgaatatgaagaagtgg 153  Q
    |||| ||||||||||||||||||||||| ||||||||||||||| ||||||||||  ||||       |||||||||||||||||||||||| |||| ||    
T  11220441 tatgtccatttgtaatgttggtttaattctttaataaaatgttctttttataaaataaaaaaaaatgttccttgaattttgtatgaatatga-gaagggg 11220539  T
Q  154 tggacggaataagatgaagagagggnnnnnnnttatgtggtgatggttcactattgtatataacagacctgcaatcgaatggttgaaattatatcagaaa 253  Q
    |||| |||| |||||||||| ||||       ||||||||||||||||||||| |||||||||  ||||||||||  ||||||||||||||||||| |||    
T  11220540 tggaaggaagaagatgaagaaagggaaaaaa-ttatgtggtgatggttcactactgtatataatggacctgcaatataatggttgaaattatatcataaa 11220638  T
Q  254 tgttacacattaaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtga 353  Q
    | ||  |||||||||||| |||||||  |||||||||||||||| || ||||||||||  |||||| |||||||| |||||||||||||||||||| |||    
T  11220639 tatttgacattaaaaaacaaacggaggggaccaaaatagtaaacgacagaagatttataggaccaaattgagacactttatagttaggggaccaaaatga 11220738  T
Q  354 aaaccaaaaat 364  Q
    ||  |||||||    
T  11220739 aattcaaaaat 11220749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 126 - 356
Target Start/End: Original strand, 25585686 - 25585916
Alignment:
Q  126 tgaattttgtatgaatatgaagaagtggtggac-ggaataagatgaagagagggnnnnnnnttatgtggtgatggttcactattgtatataacagacctg 224  Q
    |||||| |||||||| ||||||||||||||||  |||| |||||||||||||||       |||||||||||||||||||||||||||||||  || |||    
T  25585686 tgaattatgtatgaacatgaagaagtggtggaaaggaagaagatgaagagagggaaaaaa-ttatgtggtgatggttcactattgtatataatggatctg 25585784  T
Q  225 caatcgaatggttgaaattatatcagaaatgttacacattaaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttga 324  Q
    ||||||||||||| |||| ||||||||||||||| ||||||||||||||||||||||||| |||||||||||| || |||||||||||||||||| ||||    
T  25585785 caatcgaatggttcaaatcatatcagaaatgttagacattaaaaaactaacggagatgactaaaatagtaaacgacagaagatttatgagaccaaattga 25585884  T
Q  325 gacagtttatagttaggggaccaaagtgaaaa 356  Q
    |||  || |||||||| |||||| ||||||||    
T  25585885 gacgtttaatagttagaggaccagagtgaaaa 25585916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 126 - 357
Target Start/End: Original strand, 32980304 - 32980536
Alignment:
Q  126 tgaattttgtatgaatatgaagaagtggtggacggaataagatgaagagagggnnnnnnn-ttatgtggtgatggttcactattgtatataacagacctg 224  Q
    |||||||||||| || ||||| ||| |||||| |||| |||||||||||||||        |||||||||||||||||||||||||||||||  ||||||    
T  32980304 tgaattttgtataaacatgaaaaagcggtggaaggaaaaagatgaagagagggaaaaaaaattatgtggtgatggttcactattgtatataatggacctg 32980403  T
Q  225 caatcgaatggttgaaattatatcagaaatgttacacattaaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttga 324  Q
    |||||||||||||||||| |||||| |||||||| | ||||||||||||||||||||||||||||||||||||  | ||||||||||  |||||| ||||    
T  32980404 caatcgaatggttgaaatcatatcaaaaatgttagaaattaaaaaactaacggagatgaccaaaatagtaaacggcagaagatttataggaccaaattga 32980503  T
Q  325 gacagtttatagttaggggaccaaagtgaaaac 357  Q
    |||| ||| |||||||||||||||| |||||||    
T  32980504 gacactttgtagttaggggaccaaattgaaaac 32980536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 219 - 364
Target Start/End: Original strand, 8372562 - 8372707
Alignment:
Q  219 gacctgcaatcgaatggttgaaattatatcagaaatgttacacattaaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagacca 318  Q
    |||||||||||||||||||||||| |||||| |||| ||| |||||||||||||||||||| |||||||||||||||||   ||  |||||||| |||||    
T  8372562 gacctgcaatcgaatggttgaaatcatatcaaaaatattaaacattaaaaaactaacggaggtgaccaaaatagtaaactgttgtggatttatgggacca 8372661  T
Q  319 atttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    | |||||||| |||||||||||||||||||| ||||||||||||||    
T  8372662 aattgagacactttatagttaggggaccaaaatgaaaaccaaaaat 8372707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 211 - 346
Target Start/End: Complemental strand, 43345497 - 43345362
Alignment:
Q  211 atataacagacctgcaatcgaatggttgaaattatatcagaaatgttacacattaaaaaactaacggagatgaccaaaatagtaaacaactgaagattta 310  Q
    |||||| ||||||||||||||||||||| ||| |||||| |||| ||| |||||||||||||||||||||  |||||||| |||||| |  |||||||||    
T  43345497 atataatagacctgcaatcgaatggttggaatcatatcaaaaatattaaacattaaaaaactaacggagaaaaccaaaatggtaaacgagagaagattta 43345398  T
Q  311 tgagaccaatttgagacagtttatagttaggggacc 346  Q
    || |||||| |||| ||| |||||||||| ||||||    
T  43345397 tgggaccaaattgaaacattttatagttaagggacc 43345362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 267 - 364
Target Start/End: Complemental strand, 19622127 - 19622030
Alignment:
Q  267 aaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||||||||||||| |||||||  |||||| | | ||||||||||||||| || |||||||| |||||||||||||||||||||||||||||||||||    
T  19622127 aaaactaacggagaggaccaaaccagtaaatagcagaagatttatgagactaaattgagacactttatagttaggggaccaaagtgaaaaccaaaaat 19622030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 265 - 364
Target Start/End: Original strand, 51825613 - 51825712
Alignment:
Q  265 aaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||| ||||||||| |||||||||||||||||| || ||||||||||| |||||| |||| ||| |||||||||| ||||||||||||||| ||||||||    
T  51825613 aaaatactaacggatatgaccaaaatagtaaacgacagaagatttatgggaccaaattgaaacactttatagttaagggaccaaagtgaaatccaaaaat 51825712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 266 - 364
Target Start/End: Complemental strand, 8371343 - 8371245
Alignment:
Q  266 aaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    ||||||||||||||| ||||||||||||||||  | |||||||||||  ||||| |||||||| |||||||||||||||||||| ||||||| ||||||    
T  8371343 aaaaactaacggagaggaccaaaatagtaaactgcagaagatttatggaaccaaattgagacattttatagttaggggaccaaaatgaaaacaaaaaat 8371245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 266 - 364
Target Start/End: Complemental strand, 11219553 - 11219455
Alignment:
Q  266 aaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||| |||||||||||||||||||||||||||  | ||||| | |||||||||| |||||||| |||||||||||||||||||| ||||| ||||||||    
T  11219553 aaaatctaacggagatgaccaaaatagtaaacggcagaagactcatgagaccaaattgagacactttatagttaggggaccaaaatgaaatccaaaaat 11219455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 272 - 364
Target Start/End: Original strand, 47808105 - 47808197
Alignment:
Q  272 taacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    ||||||||| ||||||||||| |||| || |||||||||||||||||| |||||||| |||||||||| || |||||||||||| ||||||||    
T  47808105 taacggagaggaccaaaatagcaaacgacagaagatttatgagaccaaattgagacactttatagttaaggaaccaaagtgaaatccaaaaat 47808197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 218 - 364
Target Start/End: Original strand, 53809438 - 53809584
Alignment:
Q  218 agacctgcaatcgaatggttgaaattatatcagaaatgttacacattaaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagacc 317  Q
    |||| ||||||| ||||||| ||||||||||| |||  ||| ||||||||||||||||||||||||| | | ||||||||    ||| | |||||||||     
T  53809438 agacatgcaatcaaatggttaaaattatatcaaaaaatttagacattaaaaaactaacggagatgacaacattagtaaacggaggaaaacttatgagaca 53809537  T
Q  318 aatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    || |||||||  |||| ||||||||||||||| ||||||| ||||||    
T  53809538 aaattgagacgttttaaagttaggggaccaaaatgaaaacaaaaaat 53809584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 207 - 364
Target Start/End: Complemental strand, 17345492 - 17345336
Alignment:
Q  207 ttgtatataacagacctgcaatcgaatggttgaaattatatcagaaatgttacacattaaaaaactaacggagatgaccaaaatagtaaacaactgaaga 306  Q
    ||||||| || |||| ||||||||||||||| |||| |||| | |||| ||| ||||||||||||||||||||| |||||||| ||  ||||   |||||    
T  17345492 ttgtatacaatagacatgcaatcgaatggttcaaatcatattaaaaatattagacattaaaaaactaacggagaggaccaaaa-aggtaacagaagaaga 17345394  T
Q  307 tttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||| |  ||||| |||||| | ||| |||||||||||||||  ||||||||||||||    
T  17345393 tttaaggaaccaaattgagatactttttagttaggggaccaacctgaaaaccaaaaat 17345336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 265 - 362
Target Start/End: Complemental strand, 42632830 - 42632733
Alignment:
Q  265 aaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaa 362  Q
    |||| ||||||||||| ||| |||||||||||| ||  |||||||||| || ||| |||||||| |||||||||||||||||||| ||||||||||||    
T  42632830 aaaatactaacggagaggactaaaatagtaaacgacataagatttatgggatcaaattgagacactttatagttaggggaccaaattgaaaaccaaaa 42632733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 271 - 364
Target Start/End: Original strand, 54653964 - 54654057
Alignment:
Q  271 ctaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||||||||| |||||||||||||||| || ||||| ||||| |||||| |||||||| |||||||||| ||||||||| ||||| ||||||||    
T  54653964 ctaacggagaggaccaaaatagtaaacgacagaagaattatgggaccaaattgagacactttatagttaagggaccaaaatgaaatccaaaaat 54654057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 272 - 364
Target Start/End: Complemental strand, 41386247 - 41386155
Alignment:
Q  272 taacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    ||||||||| ||||||||||||||||  |  ||||||||||  ||||| |||||||| |||||||||||||||||||| ||||||||||||||    
T  41386247 taacggagaggaccaaaatagtaaacgtcgtaagatttatggaaccaaattgagacactttatagttaggggaccaaattgaaaaccaaaaat 41386155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 265 - 364
Target Start/End: Complemental strand, 29536838 - 29536739
Alignment:
Q  265 aaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    ||||| |||||||||| |||||||||||||||| |  ||||||||||| |||||| |||||||| ||||||||||| ||| |||| ||||| ||||||||    
T  29536838 aaaaagctaacggagaggaccaaaatagtaaacgaaagaagatttatgggaccaaattgagacactttatagttagaggatcaaaatgaaatccaaaaat 29536739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 265 - 364
Target Start/End: Original strand, 41387425 - 41387524
Alignment:
Q  265 aaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||| ||||||||||| ||||||||||||||||     ||| |||||| |||||| |||||||| |||||||||||||||||||| ||||||||||||||    
T  41387425 aaaatactaacggagaggaccaaaatagtaaacggtgtaaggtttatgggaccaaattgagacattttatagttaggggaccaaattgaaaaccaaaaat 41387524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 266 - 357
Target Start/End: Complemental strand, 47765561 - 47765471
Alignment:
Q  266 aaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaac 357  Q
    |||||||||||||||||||||||| | |||||||| |||||| || | || |||||||||||| |||||||||| |||||||||||||||||    
T  47765561 aaaaactaacggagatgaccaaaacaataaacaacggaagatataagggatcaatttgagacactttatagtta-gggaccaaagtgaaaac 47765471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 266 - 364
Target Start/End: Original strand, 26798899 - 26798997
Alignment:
Q  266 aaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    ||||||||||||||| ||||||||| ||||||    ||||| ||||| |||||| |||||||| |||||||||||||||||||| | ||||||||||||    
T  26798899 aaaaactaacggagaggaccaaaatggtaaacggaggaagaattatgggaccaaattgagacattttatagttaggggaccaaaataaaaaccaaaaat 26798997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 223 - 349
Target Start/End: Complemental strand, 48253099 - 48252973
Alignment:
Q  223 tgcaatcgaatggttgaaattatatcagaaatgttacacattaaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaattt 322  Q
    ||||||| ||||||| |||| | |||| |||  ||| ||||||||||||||||||||||||| | | ||||||||    ||||| ||||| |||||| ||    
T  48253099 tgcaatcaaatggttaaaatcacatcaaaaaatttagacattaaaaaactaacggagatgactacattagtaaacggaggaagacttatgggaccaaatt 48253000  T
Q  323 gagacagtttatagttaggggaccaaa 349  Q
    |||||| ||||||||||||||||||||    
T  48252999 gagacactttatagttaggggaccaaa 48252973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 302 - 364
Target Start/End: Original strand, 51401380 - 51401442
Alignment:
Q  302 gaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    ||||||||||| |||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  51401380 gaagatttatgggaccaaattgagacactttatagttaggggaccaaagtgaaaaccaaaaat 51401442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 266 - 364
Target Start/End: Complemental strand, 53808441 - 53808343
Alignment:
Q  266 aaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    ||||||||| |||||||||||||||||||||| ||  |||||||||| |||||  |||||||| |||||||||||| ||||||| | |||||| |||||    
T  53808441 aaaaactaatggagatgaccaaaatagtaaacgacataagatttatgggaccagattgagacactttatagttaggagaccaaattcaaaaccgaaaat 53808343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 209 - 364
Target Start/End: Original strand, 19252938 - 19253093
Alignment:
Q  209 gtatataacagacctgcaatcgaatggttgaaattatatcagaaatgttacacattaaaaaactaacggagatgaccaaaatagtaaacaactgaagatt 308  Q
    ||||||||  ||| ||||||| ||||||  |||  |||| | |||| ||| |||||||||||  |||||| | ||||||||| ||||||  | ||| |||    
T  19252938 gtatataatggacttgcaatcaaatggtcaaaacaatataaaaaatattagacattaaaaaataaacggacaggaccaaaatggtaaacggcagaatatt 19253037  T
Q  309 tatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||| || ||| |||||||| |||||| ||||||||||||| ||||||||||||||    
T  19253038 tatgggatcaaattgagacattttataattaggggaccaaattgaaaaccaaaaat 19253093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 273 - 364
Target Start/End: Complemental strand, 43102010 - 43101919
Alignment:
Q  273 aacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    ||||||||||| ||||||||||| | || ||||| ||||| |||||| |||||||| |||||| |||| |||||||| ||||||||||||||    
T  43102010 aacggagatgatcaaaatagtaagcgacagaagaattatgggaccaaattgagacactttataattagaggaccaaaatgaaaaccaaaaat 43101919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 265 - 364
Target Start/End: Original strand, 47855330 - 47855429
Alignment:
Q  265 aaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||||| ||||||||| ||||||||||||||||  | ||||||||||  |||||| |||||||| ||||||||||  |||||||| ||||| ||||||||    
T  47855330 aaaaaaataacggagaggaccaaaatagtaaacggcagaagatttataggaccaaattgagacactttatagttaacggaccaaaatgaaatccaaaaat 47855429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 266 - 364
Target Start/End: Complemental strand, 25583237 - 25583139
Alignment:
Q  266 aaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    ||||| |||| |||| ||||||||||||||||  | ||||| ||||| |||||| |||||||  || |||||||||||||||||||||||| |||||||    
T  25583237 aaaaattaacagagaggaccaaaatagtaaacggcagaagacttatgggaccaaattgagacgtttaatagttaggggaccaaagtgaaaatcaaaaat 25583139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 270 - 364
Target Start/End: Original strand, 42633883 - 42633977
Alignment:
Q  270 actaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||||| |||| |||||||||| ||||| ||  |||||||||| |||||| |||||||| | |||||||||||||||||| |||||| |||||||    
T  42633883 actaacagagaggaccaaaataataaacgacataagatttatgggaccaaattgagacactctatagttaggggaccaaattgaaaatcaaaaat 42633977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 200 - 292
Target Start/End: Original strand, 7921570 - 7921662
Alignment:
Q  200 ttcactattgtatataacagacctgcaatcgaatggttgaaattatatcagaaatgttacacattaaaaaactaacggagatgaccaaaatag 292  Q
    |||||| ||||||| |  |||||  |||||||||||||||||| |||||| |||| ||| ||||||||||||||||||||| || ||||||||    
T  7921570 ttcactgttgtatacagtagaccgacaatcgaatggttgaaatcatatcaaaaatattagacattaaaaaactaacggagaggatcaaaatag 7921662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 306 - 364
Target Start/End: Original strand, 10987686 - 10987744
Alignment:
Q  306 atttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    ||||||| |||||| |||||||| |||||||||||||||||||| ||||||||||||||    
T  10987686 atttatgggaccaaattgagacactttatagttaggggaccaaaatgaaaaccaaaaat 10987744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 198 - 364
Target Start/End: Original strand, 47766876 - 47767041
Alignment:
Q  198 ggttcactattgtatataacagacctgcaatcgaatggttgaaattatatcagaaatgttacacattaaaaaactaacggagatgaccaaaatagtaaac 297  Q
    |||||||||||  ||| ||  ||| ||||||| ||||||| |||| | || | |||  ||| ||||||||||||||||| ||| ||| | | ||||||||    
T  47766876 ggttcactattagatacaatggacatgcaatcaaatggttaaaatcacataaaaaaatttagacattaaaaaactaacgcagaggacgacattagtaaac 47766975  T
Q  298 aactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
        ||||| ||||| |||||| |||||||| |||||||||| ||||||||| ||||||||||||||    
T  47766976 ggaggaagacttatgggaccaaattgagacactttatagtta-gggaccaaaatgaaaaccaaaaat 47767041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 266 - 364
Target Start/End: Complemental strand, 51400338 - 51400240
Alignment:
Q  266 aaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||||| |||||| | ||||||||| ||| ||  ||||| ||||||| ||| || |||||||| ||||||||||||| | |||||||||||||||||||    
T  51400338 aaaaacaaacggaaaggaccaaaatggtatacggctgaaaatttatgggactaaattgagacactttatagttagggaatcaaagtgaaaaccaaaaat 51400240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 251 - 364
Target Start/End: Original strand, 19622897 - 19623010
Alignment:
Q  251 aaatgttacacattaaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaag 350  Q
    |||| ||| |||| |||||| |||| | ||||||||||||||  ||| || |||||  || | ||||| ||||||||| |||||||||||| ||||||||    
T  19622897 aaatattagacatcaaaaaattaactgcgatgaccaaaatagataacgacagaagacataagggaccagtttgagacactttatagttaggagaccaaag 19622996  T
Q  351 tgaaaaccaaaaat 364  Q
    ||||||| ||||||    
T  19622997 tgaaaacaaaaaat 19623010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 265 - 349
Target Start/End: Complemental strand, 2124153 - 2124069
Alignment:
Q  265 aaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaa 349  Q
    |||| ||||||||||||||||||||||||||||  |  |||||||||| |||||| || ||| | ||||||||||||| ||||||    
T  2124153 aaaatactaacggagatgaccaaaatagtaaacggcataagatttatgggaccaaattaagatattttatagttagggaaccaaa 2124069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 265 - 364
Target Start/End: Complemental strand, 7820514 - 7820415
Alignment:
Q  265 aaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||||||||||||||| |||||||| ||||||| ||  || ||||||| | |||| |||| ||| ||||||||||| |||||||| |||||  |||||||    
T  7820514 aaaaaactaacggagaggaccaaaacagtaaacgacataaaatttatgggtccaaattgaaacactttatagttagaggaccaaaatgaaattcaaaaat 7820415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 266 - 349
Target Start/End: Complemental strand, 23559942 - 23559859
Alignment:
Q  266 aaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaa 349  Q
    ||||||||||||||| |||||||||||||||| || ||||| ||||| || ||| |||||||| || ||| ||| |||||||||    
T  23559942 aaaaactaacggagaggaccaaaatagtaaacgacagaagaattatgggatcaaattgagacacttaataattaagggaccaaa 23559859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 273 - 364
Target Start/End: Original strand, 49122002 - 49122093
Alignment:
Q  273 aacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||||| | ||||||||| ||||||  | ||| | |||||||||||| |||||||| |||||||||| | ||||||| ||||||||||||||    
T  49122002 aacggaaaagaccaaaatggtaaacggcagaaaacttatgagaccaaattgagacactttatagttaagagaccaaaatgaaaaccaaaaat 49122093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 265 - 364
Target Start/End: Original strand, 49334329 - 49334428
Alignment:
Q  265 aaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    ||||||||||| ||||||| |||||||||||||    ||||||||||  |||||  |||||||| ||||||||||  |||||||| ||||||| ||||||    
T  49334329 aaaaaactaacagagatgatcaaaatagtaaacggtagaagatttatcggaccatattgagacaatttatagttaaaggaccaaaatgaaaacaaaaaat 49334428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 266 - 356
Target Start/End: Original strand, 12062377 - 12062467
Alignment:
Q  266 aaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaa 356  Q
    ||||||||| ||| ||||||||||||||||||| |  |||| | ||| |||||| |||||||| || ||||||| ||||||||| ||||||    
T  12062377 aaaaactaatggaaatgaccaaaatagtaaacagcaaaagagtaatgggaccaaattgagacacttaatagttaagggaccaaactgaaaa 12062467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 266 - 364
Target Start/End: Original strand, 17350095 - 17350193
Alignment:
Q  266 aaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    ||||||||||||||| |||||||| ||  ||||   |||||  || | |||||| |||||||| ||||||||||||||| |||| ||||||||||||||    
T  17350095 aaaaactaacggagaggaccaaaagaggtaacaggagaagacataagggaccaaattgagacactttatagttaggggaacaaattgaaaaccaaaaat 17350193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 194 - 280
Target Start/End: Complemental strand, 26797514 - 26797428
Alignment:
Q  194 tgatggttcactattgtatataacagacctgcaatcgaatggttgaaattatatcagaaatgttacacattaaaaaactaacggaga 280  Q
    ||||||| || | ||||||| ||  ||||||||||| ||||||||||||||||||| |||| |||  ||||| ||||||||||||||    
T  26797514 tgatggtccattgttgtatacaatggacctgcaatcaaatggttgaaattatatcaaaaatattaatcattagaaaactaacggaga 26797428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 218 - 324
Target Start/End: Complemental strand, 35173318 - 35173212
Alignment:
Q  218 agacctgcaatcgaatggttgaaattatatcagaaatgttacacattaaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagacc 317  Q
    |||||||||||| || |||||||||||||| | || | ||| |||||| || |||||  || |||||||||||||||||| ||  |||| ||||||||||    
T  35173318 agacctgcaatcaaacggttgaaattatataaaaattattagacattagaatactaatagaaatgaccaaaatagtaaacgacaaaagagttatgagacc 35173219  T
Q  318 aatttga 324  Q
    || ||||    
T  35173218 aaattga 35173212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 314 - 364
Target Start/End: Complemental strand, 39133092 - 39133042
Alignment:
Q  314 gaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||||| |||||||| |||||||||||||||||||| ||||||||||||||    
T  39133092 gaccaaattgagacactttatagttaggggaccaaattgaaaaccaaaaat 39133042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 270 - 364
Target Start/End: Complemental strand, 47806936 - 47806843
Alignment:
Q  270 actaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    ||||||||||| ||||||||| ||||||| | ||||||||||  || ||| |||||||| |||||| ||| ||||||||| ||||| ||||||||    
T  47806936 actaacggagaggaccaaaat-gtaaacagcagaagatttataggatcaaattgagacactttataattaagggaccaaaatgaaatccaaaaat 47806843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 312 - 364
Target Start/End: Original strand, 2225063 - 2225115
Alignment:
Q  312 gagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||||||| ||||||||||||| ||||||||||||||| ||||| ||||||||    
T  2225063 gagaccaaattgagacagtttaaagttaggggaccaaattgaaatccaaaaat 2225115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 284 - 364
Target Start/End: Original strand, 13077962 - 13078042
Alignment:
Q  284 ccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||||||||||||| ||  |||||||||| |||||| || ||||| |||||| |||| |||||||| |||||| |||||||    
T  13077962 ccaaaatagtaaacgacataagatttatgggaccaaattaagacattttatacttagaggaccaaattgaaaatcaaaaat 13078042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 266 - 356
Target Start/End: Original strand, 35174375 - 35174465
Alignment:
Q  266 aaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaa 356  Q
    ||||| |||| || |||||||||||||||||| |  ||||| ||||| ||||| ||||| ||| || ||||||| ||||||||| ||||||    
T  35174375 aaaaattaacagaaatgaccaaaatagtaaacgatagaagagttatgggaccattttgaaacacttaatagttaagggaccaaaatgaaaa 35174465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 266 - 356
Target Start/End: Complemental strand, 49333106 - 49333016
Alignment:
Q  266 aaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaa 356  Q
    |||||||||| |||||| ||| ||| ||||||||| | ||| |||||||||||| || ||||| |||||||| | | ||||||| ||||||    
T  49333106 aaaaactaaccgagatggccagaatggtaaacaacagtagagttatgagaccaagttaagacactttatagtcatgagaccaaactgaaaa 49333016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 268 - 349
Target Start/End: Original strand, 53049032 - 53049113
Alignment:
Q  268 aaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaa 349  Q
    ||||||||||||| |||||||| ||  ||| || |||||  || | |||||| |||||||| ||||||||||||||||||||    
T  53049032 aaactaacggagaggaccaaaagaggtaacgacagaagacataagggaccaaattgagacactttatagttaggggaccaaa 53049113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 272 - 364
Target Start/End: Original strand, 32974222 - 32974314
Alignment:
Q  272 taacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||||||||||||||||| ||  |||  | |||||  || | |||||| |||||||| |||||||||||||||||||| ||||| || |||||    
T  32974222 taacggagatgaccaaaagaggtaacggcagaagacataagggaccaaattgagacactttatagttaggggaccaaaatgaaatccgaaaat 32974314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 349
Target Start/End: Original strand, 43103288 - 43103372
Alignment:
Q  265 aaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaa 349  Q
    |||| ||||||||| | ||||||||||||||||  | ||| |||||||| ||||| |||||| | ||| ||||||||||| ||||    
T  43103288 aaaatactaacggaaaggaccaaaatagtaaacggcagaaaatttatgaaaccaaattgagatattttgtagttaggggatcaaa 43103372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 272 - 364
Target Start/End: Complemental strand, 53048014 - 53047922
Alignment:
Q  272 taacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    ||||||||| |||||||| ||  ||| || |||||  || | |||||| |||||||| |||||||||||||||||||| ||||| || |||||    
T  53048014 taacggagaggaccaaaagaggtaacgacagaagacataagggaccaaattgagacactttatagttaggggaccaaaatgaaatccgaaaat 53047922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 285 - 364
Target Start/End: Complemental strand, 10986756 - 10986677
Alignment:
Q  285 caaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||||||||||||  |  || ||||||  |||||| |||| ||| ||||||||||  |||||||||||||||||||||||    
T  10986756 caaaatagtaaacggcgtaaaatttataggaccaaattgaaacactttatagttaatggaccaaagtgaaaaccaaaaat 10986677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 314 - 364
Target Start/End: Complemental strand, 5416273 - 5416223
Alignment:
Q  314 gaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||||| |||||||| |||||||||||||||||||| ||||| || |||||    
T  5416273 gaccaaattgagacattttatagttaggggaccaaaatgaaatccgaaaat 5416223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 314 - 364
Target Start/End: Original strand, 5417089 - 5417139
Alignment:
Q  314 gaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    ||||||| ||||||| |||||||||||||||||||| ||||| || |||||    
T  5417089 gaccaatctgagacactttatagttaggggaccaaaatgaaatccgaaaat 5417139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 314 - 364
Target Start/End: Complemental strand, 32973214 - 32973164
Alignment:
Q  314 gaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||||| |||||||| |||||||||||||||||||| ||||| || |||||    
T  32973214 gaccaaattgagacactttatagttaggggaccaaaatgaaatccgaaaat 32973164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 314 - 364
Target Start/End: Original strand, 39288480 - 39288530
Alignment:
Q  314 gaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||||| |||||||| |||||||||||||||||||| ||||| || |||||    
T  39288480 gaccaaattgagacactttatagttaggggaccaaaatgaaatccgaaaat 39288530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 314 - 364
Target Start/End: Original strand, 48035365 - 48035415
Alignment:
Q  314 gaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||||| |||||||| |||||||||||||||||||| ||||| || |||||    
T  48035365 gaccaaattgagacactttatagttaggggaccaaaatgaaatccgaaaat 48035415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 314 - 364
Target Start/End: Original strand, 52293564 - 52293614
Alignment:
Q  314 gaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||||| |||||||| |||||||||||||||||||| ||||| || |||||    
T  52293564 gaccaaattgagacactttatagttaggggaccaaaatgaaatccgaaaat 52293614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 314 - 364
Target Start/End: Original strand, 52705349 - 52705399
Alignment:
Q  314 gaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||||| |||||||| |||||||||||||||||||| ||||| || |||||    
T  52705349 gaccaaattgagacactttatagttaggggaccaaaatgaaatccgaaaat 52705399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 314 - 364
Target Start/End: Complemental strand, 53342791 - 53342741
Alignment:
Q  314 gaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||||| |||||||| |||||||||||||||||||| ||||| || |||||    
T  53342791 gaccaaattgagacactttatagttaggggaccaaaatgaaatccgaaaat 53342741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 314 - 355
Target Start/End: Complemental strand, 19579295 - 19579254
Alignment:
Q  314 gaccaatttgagacagtttatagttaggggaccaaagtgaaa 355  Q
    |||||| |||||||| |||||||||||||||||||| |||||    
T  19579295 gaccaaattgagacattttatagttaggggaccaaaatgaaa 19579254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 314 - 355
Target Start/End: Original strand, 55443591 - 55443632
Alignment:
Q  314 gaccaatttgagacagtttatagttaggggaccaaagtgaaa 355  Q
    |||||| |||||||| |||||||||||||||||||| |||||    
T  55443591 gaccaaattgagacactttatagttaggggaccaaaatgaaa 55443632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 223 - 279
Target Start/End: Original strand, 7271541 - 7271597
Alignment:
Q  223 tgcaatcgaatggttgaaattatatcagaaatgttacacattaaaaaactaacggag 279  Q
    ||||||| ||||||| |||||| |||| |||  ||| ||||||||||||||||||||    
T  7271541 tgcaatcaaatggttaaaattaaatcaaaaagtttagacattaaaaaactaacggag 7271597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 312 - 364
Target Start/End: Complemental strand, 7583547 - 7583495
Alignment:
Q  312 gagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||||||| |||||||| ||||||||||| |||||||| ||||| || |||||    
T  7583547 gagaccaaattgagacactttatagttagtggaccaaaatgaaatccgaaaat 7583495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 265 - 297
Target Start/End: Complemental strand, 47854611 - 47854579
Alignment:
Q  265 aaaaaactaacggagatgaccaaaatagtaaac 297  Q
    |||||||||||||||| ||||||||||||||||    
T  47854611 aaaaaactaacggagaggaccaaaatagtaaac 47854579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 364
Target Start/End: Original strand, 51214201 - 51214257
Alignment:
Q  308 ttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    ||||| |||||| ||||||||||||| ||||| ||||||||| |||||  |||||||    
T  51214201 ttatgggaccaaattgagacagtttaaagttaagggaccaaaatgaaattcaaaaat 51214257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 364
Target Start/End: Original strand, 54109657 - 54109713
Alignment:
Q  308 ttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||||||||||| |||||||| |||| ||||| ||||||||| |||||  |||||||    
T  54109657 ttatgagaccaaattgagacaatttaaagttaagggaccaaaatgaaattcaaaaat 54109713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 119; Significance: 1e-60; HSPs: 77)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 126 - 364
Target Start/End: Original strand, 44304831 - 44305070
Alignment:
Q  126 tgaattttgtatgaatatgaagaagtggtggacggaataagatgaagagagggnnnnnnn-ttatgtggtgatggttcactattgtatataacagacctg 224  Q
    ||||||||||||||| ||||| ||| |||||| |||| |||||||||||||||        |||||||||||||||||||||||||||||||  |||||     
T  44304831 tgaattttgtatgaacatgaaaaagcggtggaaggaaaaagatgaagagagggagaaaaaattatgtggtgatggttcactattgtatataatggaccta 44304930  T
Q  225 caatcgaatggttgaaattatatcagaaatgttacacattaaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttga 324  Q
    ||||||||| |||||||| |||||||| |||||| | ||||||||| ||||||||||||||||||||||||||| | ||||||||||  |||||| ||||    
T  44304931 caatcgaattgttgaaatcatatcagagatgttaaaaattaaaaaattaacggagatgaccaaaatagtaaacagcggaagatttataggaccaaattga 44305030  T
Q  325 gacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||| ||| |||||||||||||||| ||||||| ||||||    
T  44305031 gacactttgtagttaggggaccaaattgaaaacaaaaaat 44305070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 219 - 364
Target Start/End: Original strand, 21104256 - 21104401
Alignment:
Q  219 gacctgcaatcgaatggttgaaattatatcagaaatgttacacattaaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagacca 318  Q
    |||||||||||||||||||||||  |||||| ||||  || |||||||||| | |||||| | ||||||||| |||||| || |||||  ||||||||||    
T  21104256 gacctgcaatcgaatggttgaaacaatatcaaaaatagtaaacattaaaaagcaaacggaaaggaccaaaatggtaaacgacagaagacatatgagacca 21104355  T
Q  319 atttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    | |||||||| |||||||||||||||||||| ||||||| ||||||    
T  21104356 aattgagacactttatagttaggggaccaaaatgaaaacaaaaaat 21104401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 198 - 364
Target Start/End: Original strand, 46795951 - 46796117
Alignment:
Q  198 ggttcactattgtatataacagacctgcaatcgaatggttgaaattatatcagaaatgttacacattaaaaaactaacggagatgaccaaaatagtaaac 297  Q
    |||||||||||  ||| ||  ||| ||||||| ||||||| |||| |||||| |||  ||| ||||||||||||||||||||| ||||| ||||||||||    
T  46795951 ggttcactattaaatacaatggacatgcaatcaaatggttaaaatcatatcaaaaaatttagacattaaaaaactaacggagaggaccacaatagtaaac 46796050  T
Q  298 aactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
        ||||| ||||| |||||| |||||||| |||||||||||||||||||| | ||||||||||||    
T  46796051 ggaggaagacttatgggaccaaattgagacactttatagttaggggaccaaaattaaaaccaaaaat 46796117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 218 - 349
Target Start/End: Complemental strand, 6139168 - 6139037
Alignment:
Q  218 agacctgcaatcgaatggttgaaattatatcagaaatgttacacattaaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagacc 317  Q
    |||||||||||| || |||||||||||||| | |||| ||| ||||||||| |||||| ||||||||||||||| ||||||||  |||| ||||||||||    
T  6139168 agacctgcaatcaaacggttgaaattatataaaaaatattagacattaaaatactaacagagatgaccaaaataataaacaacataagagttatgagacc 6139069  T
Q  318 aatttgagacagtttatagttaggggaccaaa 349  Q
    || |||||||| || ||| ||| |||||||||    
T  6139068 aaattgagacatttaataattaagggaccaaa 6139037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 219 - 364
Target Start/End: Complemental strand, 11113912 - 11113767
Alignment:
Q  219 gacctgcaatcgaatggttgaaattatatcagaaatgttacacattaaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagacca 318  Q
    |||||||||||||| ||||  |||||||| | |||| ||| ||||  ||||||||||||| ||||||||||| ||||||  | ||||| |||||||||||    
T  11113912 gacctgcaatcgaacggttataattatattaaaaatattagacatctaaaaactaacggaaatgaccaaaatggtaaacggcagaagagttatgagacca 11113813  T
Q  319 atttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    | |||||||| |||||||||| ||||| ||| |||||||| |||||    
T  11113812 aattgagacactttatagttaagggactaaaatgaaaaccgaaaat 11113767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 264 - 364
Target Start/End: Original strand, 33377355 - 33377455
Alignment:
Q  264 taaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaa 363  Q
    ||||| ||||||||||| ||||||||||||||||  | ||||||||||| |||||| |||||||| |||||||||||||||||||| |||||| ||||||    
T  33377355 taaaatactaacggagaggaccaaaatagtaaacggcagaagatttatgggaccaaattgagacactttatagttaggggaccaaattgaaaatcaaaaa 33377454  T
Q  364 t 364  Q
    |    
T  33377455 t 33377455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 265 - 363
Target Start/End: Original strand, 5688629 - 5688727
Alignment:
Q  265 aaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaa 363  Q
    |||| |||||||||||||||||||||||||||| ||  ||||||||||  ||||| |||||||| |||||||||||||||||||| ||||||| |||||    
T  5688629 aaaatactaacggagatgaccaaaatagtaaacgacataagatttatggaaccaaattgagacactttatagttaggggaccaaattgaaaactaaaaa 5688727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 225 - 347
Target Start/End: Original strand, 34439612 - 34439734
Alignment:
Q  225 caatcgaatggttgaaattatatcagaaatgttacacattaaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttga 324  Q
    ||||| ||||| |||||| ||||  ||||| ||| |||||| |||||||||||||||||||||||||||||||  | ||||||||||| |||||| ||||    
T  34439612 caatctaatggctgaaatcatatttgaaatattatacattagaaaactaacggagatgaccaaaatagtaaacggcagaagatttatgggaccaaattga 34439711  T
Q  325 gacagtttatagttaggggacca 347  Q
     ||| |||||||||| |||||||    
T  34439712 aacattttatagttaagggacca 34439734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 266 - 364
Target Start/End: Complemental strand, 35787919 - 35787821
Alignment:
Q  266 aaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    ||||||||||||||| ||||||||  |||||| || ||||||||||| |||||| |||| ||| ||||||||||| |||||||||||||||||||||||    
T  35787919 aaaaactaacggagaggaccaaaacggtaaacgacagaagatttatgggaccaaattgaaacattttatagttagaggaccaaagtgaaaaccaaaaat 35787821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 223 - 364
Target Start/End: Original strand, 28103436 - 28103577
Alignment:
Q  223 tgcaatcgaatggttgaaattatatcagaaatgttacacattaaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaattt 322  Q
    |||||||||||||||||||  |||||| ||||  || |||||||||||| |||||| | ||||||||| ||||||  | ||||  ||||| |||||| ||    
T  28103436 tgcaatcgaatggttgaaacaatatcaaaaatagtaaacattaaaaaacaaacggaaaggaccaaaatggtaaacggcagaagtcttatgggaccaaatt 28103535  T
Q  323 gagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||||| |||||||||| ||||||||| ||||| ||||||||    
T  28103536 gagacactttatagttaagggaccaaaatgaaatccaaaaat 28103577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 223 - 364
Target Start/End: Complemental strand, 31711258 - 31711117
Alignment:
Q  223 tgcaatcgaatggttgaaattatatcagaaatgttacacattaaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaattt 322  Q
    |||||||||||||||||||  |||||| ||||  || |||||||||||| |||||| | || |||||| |||||| ||  |||| |||||||||||| ||    
T  31711258 tgcaatcgaatggttgaaacaatatcaaaaatagtaaacattaaaaaacaaacggaaaggatcaaaatggtaaacgacataagacttatgagaccaaatt 31711159  T
Q  323 gagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||||| ||||||||||  |||||||| ||||| ||||||||    
T  31711158 gagacactttatagttaaaggaccaaaatgaaatccaaaaat 31711117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 219 - 356
Target Start/End: Complemental strand, 52659081 - 52658944
Alignment:
Q  219 gacctgcaatcgaatggttgaaattatatcagaaatgttacacattaaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagacca 318  Q
    |||||||||||||||||||||||  |||||| |||| ||  |||||||||||| |||||| ||||| ||| | ||||||  | ||||||||||   ||||    
T  52659081 gacctgcaatcgaatggttgaaacaatatcaaaaatatttaacattaaaaaacaaacggaaatgactaaactggtaaacggcagaagatttatagaacca 52658982  T
Q  319 atttgagacagtttatagttaggggaccaaagtgaaaa 356  Q
    | |||| ||| |||||||||||||||||||||||||||    
T  52658981 aattgaaacattttatagttaggggaccaaagtgaaaa 52658944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 265 - 364
Target Start/End: Complemental strand, 37559122 - 37559023
Alignment:
Q  265 aaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||| ||||||||||||||||||||||||||||     ||| |||||| |||||| |||||||| |||||||||||||||||||| ||||||||||||||    
T  37559122 aaaatactaacggagatgaccaaaatagtaaacggtgtaaggtttatgggaccaaattgagacattttatagttaggggaccaaattgaaaaccaaaaat 37559023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 272 - 364
Target Start/End: Original strand, 37560298 - 37560390
Alignment:
Q  272 taacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    ||||||||| |||||| |||||||||  |  |||||||||| |||||| |||||||| |||||||||||||||||||| ||||||||||||||    
T  37560298 taacggagaggaccaagatagtaaacgtcgtaagatttatgggaccaaattgagacactttatagttaggggaccaaattgaaaaccaaaaat 37560390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 265 - 364
Target Start/End: Complemental strand, 33376342 - 33376243
Alignment:
Q  265 aaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||||| ||||||||| ||| |||||||||||| || ||||||||||| |||||| |||||||| |||||| |||||| || ||| ||||||||||||||    
T  33376342 aaaaaattaacggagaggactaaaatagtaaacgacagaagatttatgggaccaaattgagacactttataattagggcactaaattgaaaaccaaaaat 33376243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 282 - 364
Target Start/End: Complemental strand, 10403386 - 10403304
Alignment:
Q  282 gaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||||||||||||||| ||  |||||||| |||||||| || ||||| |||||||||||||||||||||| ||||||||||||    
T  10403386 gaccaaaatagtaaacgacgtaagatttacgagaccaaattaagacactttatagttaggggaccaaagtaaaaaccaaaaat 10403304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 126 - 292
Target Start/End: Original strand, 43895471 - 43895636
Alignment:
Q  126 tgaattttgtatgaatatgaagaagtggtggacggaataagatgaagagagggnnnnnnnttatgtggtgatggttcactattgtatataacagacctgc 225  Q
    |||||||||||  ||||| ||||||||||||| |||| |||||| ||| ||||       ||  ||| |||||||||| | ||||||| || || | |||    
T  43895471 tgaattttgtaccaatatcaagaagtggtggaaggaagaagatggagaaagggtaaaaatttg-gtgttgatggttcattgttgtatacaatagtcatgc 43895569  T
Q  226 aatcgaatggttgaaattatatcagaaatgttacacattaaaaaactaacggagatgaccaaaatag 292  Q
    ||| |||||||| |||||| |||| |||| ||| ||||||||||| |||||||||||||||||||||    
T  43895570 aattgaatggttaaaattacatcaaaaatattagacattaaaaaattaacggagatgaccaaaatag 43895636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 213 - 357
Target Start/End: Complemental strand, 27408939 - 27408795
Alignment:
Q  213 ataacagacctgcaatcgaatggttgaaattatatcagaaatgttacacattaaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatg 312  Q
    |||| ||||||||||||||||||| ||||  |||| | |||| ||| | ||||||||||  |||||  |||||||||| ||||||    |||||||||||    
T  27408939 ataatagacctgcaatcgaatggtcgaaaacatattaaaaatattagatattaaaaaacacacggacgtgaccaaaatggtaaacggaagaagatttatg 27408840  T
Q  313 agaccaatttgagacagtttatagttaggggaccaaagtgaaaac 357  Q
     |||||| |||||||| |||||||||||  ||||||| |||||||    
T  27408839 ggaccaaattgagacactttatagttagatgaccaaattgaaaac 27408795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 265 - 364
Target Start/End: Original strand, 1273425 - 1273523
Alignment:
Q  265 aaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||| ||||||||||| ||||||||||| |||| ||  |||| ||||| |||||| |||||||| |||||||||||||||||||| | ||||||||||||    
T  1273425 aaaatactaacggagaggaccaaaatagcaaacgacataagacttatgggaccaaattgagacactttatagttaggggaccaaa-ttaaaaccaaaaat 1273523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 266 - 357
Target Start/End: Original strand, 6616204 - 6616295
Alignment:
Q  266 aaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaac 357  Q
    ||||||||| ||||| |||||||| | ||||| || ||| || || | ||||||||||||||| ||||||||||||||||||||||||||||    
T  6616204 aaaaactaaaggagaggaccaaaacaataaacgacagaatatataagggaccaatttgagacactttatagttaggggaccaaagtgaaaac 6616295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 266 - 357
Target Start/End: Original strand, 11114973 - 11115064
Alignment:
Q  266 aaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaac 357  Q
    ||||||||||||||| | ||||||| |||||| || ||||| ||||| |||||| |||||| | |||||||||||||||||||| |||||||    
T  11114973 aaaaactaacggagaggtccaaaatggtaaacgacagaagagttatgggaccaaattgagatactttatagttaggggaccaaaatgaaaac 11115064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 194 - 349
Target Start/End: Complemental strand, 38417748 - 38417593
Alignment:
Q  194 tgatggttcactattgtatataacagacctgcaatcgaatggttgaaattatatcagaaatgttacacattaaaaaactaacggagatgaccaaaatagt 293  Q
    |||||| ||| | ||||||| ||  ||||||||||| || ||||||||| |||| | |||   || ||||||||| ||||||||||| |||| |||||||    
T  38417748 tgatgggtcagtgttgtatacaatggacctgcaatcaaacggttgaaatcatattaaaaaatctaaacattaaaatactaacggagaggaccgaaatagt 38417649  T
Q  294 aaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaa 349  Q
    |||| ||  |||||||||| |||||| |||| ||| || ||||||| |||||||||    
T  38417648 aaacgacataagatttatgggaccaaattgacacacttaatagttaagggaccaaa 38417593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 218 - 349
Target Start/End: Original strand, 50531701 - 50531832
Alignment:
Q  218 agacctgcaatcgaatggttgaaattatatcagaaatgttacacattaaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagacc 317  Q
    |||||||||||| || |||||||||||||| | |||| ||| |||||| || |||||| || ||||| |||||||||||| ||  |||| ||||| ||||    
T  50531701 agacctgcaatcaaacggttgaaattatataaaaaatattagacattagaatactaacagaaatgactaaaatagtaaacgacaaaagagttatgggacc 50531800  T
Q  318 aatttgagacagtttatagttaggggaccaaa 349  Q
    || |||||||| || ||||||| |||| ||||    
T  50531801 aaattgagacacttaatagttaagggatcaaa 50531832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 266 - 364
Target Start/End: Complemental strand, 86926 - 86828
Alignment:
Q  266 aaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    ||||||||||||||| |||||||| |||||||  | ||| ||||||| |||||| ||||||   ||||||||||||| |||||||||||||| ||||||    
T  86926 aaaaactaacggagaagaccaaaacagtaaacggcagaatatttatgggaccaaattgagatgctttatagttagggaaccaaagtgaaaactaaaaat 86828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 266 - 364
Target Start/End: Original strand, 30683020 - 30683118
Alignment:
Q  266 aaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    ||||||||||||||| |||||||| | | |||  | ||||||||||| |||||| |||||||| |||||||||| ||||||||| |||||| |||||||    
T  30683020 aaaaactaacggagaagaccaaaagaattaacggccgaagatttatgggaccaaattgagacactttatagttaagggaccaaaatgaaaatcaaaaat 30683118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 266 - 356
Target Start/End: Complemental strand, 38370405 - 38370315
Alignment:
Q  266 aaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaa 356  Q
    ||||||||||||||||||||||||| |||||| || ||||| |||||||||||| |||| ||| ||||| |||||  ||||||| ||||||    
T  38370405 aaaaactaacggagatgaccaaaatggtaaacgacagaagagttatgagaccaaattgatacactttatcgttagatgaccaaattgaaaa 38370315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 251 - 364
Target Start/End: Original strand, 15787480 - 15787593
Alignment:
Q  251 aaatgttacacattaaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaag 350  Q
    |||| ||| ||||||||||| ||| ||||| ||||||||| ||||||  |  || | ||||| |||||| |||||||| ||||||||||||||||||||     
T  15787480 aaatattagacattaaaaaattaatggagaggaccaaaatggtaaacggcaaaaaagttatgggaccaaattgagacactttatagttaggggaccaaaa 15787579  T
Q  351 tgaaaaccaaaaat 364  Q
    ||||||| ||||||    
T  15787580 tgaaaacaaaaaat 15787593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 219 - 364
Target Start/End: Complemental strand, 39591111 - 39590966
Alignment:
Q  219 gacctgcaatcgaatggttgaaattatatcagaaatgttacacattaaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagacca 318  Q
    ||||||||||| || ||||  ||| |||| | |||| ||| |||| ||||||||||| | || ||| |||| ||||||| || || |   || | |||||    
T  39591111 gacctgcaatcaaacggttataatcatattaaaaatattagacataaaaaaactaactgcgaggactaaaacagtaaacgacagatggcataagggacca 39591012  T
Q  319 atttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
     ||||||||| |||||||||||||||||||||||||||||||||||    
T  39591011 gtttgagacactttatagttaggggaccaaagtgaaaaccaaaaat 39590966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 272 - 348
Target Start/End: Complemental strand, 5687292 - 5687216
Alignment:
Q  272 taacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaa 348  Q
    ||||||||||||||||||||||||||  |  |||||||||| |||||| |||||||| |||||||||| ||||||||    
T  5687292 taacggagatgaccaaaatagtaaacggcaaaagatttatgggaccaaattgagacactttatagttaagggaccaa 5687216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 265 - 364
Target Start/End: Original strand, 3217601 - 3217700
Alignment:
Q  265 aaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||| ||||||||| | ||||||||||||||||||| |||||||||||||| ||| || | ||| |||| |||||  ||||||||||||||  |||||||    
T  3217601 aaaatactaacggataggaccaaaatagtaaacaacagaagatttatgagatcaaattaaaacactttaaagttaaaggaccaaagtgaaattcaaaaat 3217700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 265 - 364
Target Start/End: Complemental strand, 26788646 - 26788547
Alignment:
Q  265 aaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||| ||||||||||| ||||||||||||||||  | ||||||||||| ||| || |||||| | |||||| |||  |||||||||||||||| ||||||    
T  26788646 aaaatactaacggagaggaccaaaatagtaaacggcagaagatttatgggacgaaattgagatattttatacttataggaccaaagtgaaaactaaaaat 26788547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 265 - 364
Target Start/End: Complemental strand, 29686380 - 29686281
Alignment:
Q  265 aaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||||| ||||||||| |||||||| ||  ||| ||  ||||  || | ||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  29686380 aaaaaattaacggagaggaccaaaagaggtaacgacataagacataagggaccaatttgagacaatttatagttaagggaccaaagtgaaaaccaaaaat 29686281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 198 - 349
Target Start/End: Complemental strand, 38554120 - 38553969
Alignment:
Q  198 ggttcactattgtatataacagacctgcaatcgaatggttgaaattatatcagaaatgttacacattaaaaaactaacggagatgaccaaaatagtaaac 297  Q
    |||||||||||  ||| ||  ||| ||| ||| ||||||| |||| |||||| |||  ||| ||||||||||||||| ||||||||| | | ||||||||    
T  38554120 ggttcactattaaatacaatggacgtgcgatcaaatggttaaaatcatatcaaaaaatttagacattaaaaaactaatggagatgactacattagtaaac 38554021  T
Q  298 aactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaa 349  Q
        ||||| |||||||||||| |||||||| |||||||||||  |||||||    
T  38554020 ggaggaagacttatgagaccaaattgagacactttatagttagaagaccaaa 38553969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 266 - 357
Target Start/End: Original strand, 47668590 - 47668681
Alignment:
Q  266 aaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaac 357  Q
    |||||||||| |||| |||||||| | |||||  | || ||| || | ||||||||||||||| ||||||||||||||||||||||||||||    
T  47668590 aaaaactaacagagaggaccaaaacaataaacggcagatgatataagggaccaatttgagacactttatagttaggggaccaaagtgaaaac 47668681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 265 - 364
Target Start/End: Original strand, 55953844 - 55953943
Alignment:
Q  265 aaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||| |||||||| || ||||||||||||||||  |  |||||||| | |||||| |||||||| |||||||||| ||||||||| |||||| |||||||    
T  55953844 aaaatactaacggggaggaccaaaatagtaaacggcataagatttacgggaccaaattgagacattttatagttatgggaccaaattgaaaatcaaaaat 55953943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 266 - 364
Target Start/End: Complemental strand, 11094649 - 11094551
Alignment:
Q  266 aaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    ||||||||||| ||| |||||||| |||||||  | ||| ||||||  |||||| || ||||| |||||||||||| ||||||||| ||||||||||||    
T  11094649 aaaaactaacgaagaggaccaaaacagtaaacggcagaaaatttataggaccaaattaagacactttatagttaggagaccaaagtaaaaaccaaaaat 11094551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 198 - 364
Target Start/End: Complemental strand, 47667369 - 47667204
Alignment:
Q  198 ggttcactattgtatataacagacctgcaatcgaatggttgaaattatatcagaaatgttacacattaaaaaactaacggagatgaccaaaatagtaaac 297  Q
    |||||||||||  ||| ||  ||| ||||||| ||||||| |||| | || | |||  ||| ||||||||||||||||| ||| ||||| | ||||||||    
T  47667369 ggttcactattagatacaatggacatgcaatcaaatggttaaaatcacataaaaaaatttagacattaaaaaactaacgcagaggaccatattagtaaac 47667270  T
Q  298 aactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
        ||||| |||||||||||| |||||||| |||||||||| | ||||||| | ||||||||||||    
T  47667269 ggaggaagacttatgagaccaaattgagacactttatagtta-gagaccaaaataaaaaccaaaaat 47667204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 272 - 364
Target Start/End: Original strand, 10403416 - 10403507
Alignment:
Q  272 taacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||| |||| |||| ||||| ||||| ||||||||||||||||||||| |||| ||| |||||||||| |  | |||||||||||||||||||    
T  10403416 taaccgagaggaccgaaataataaacgactgaagatttatgagaccaaattgatacactttatagtta-gaaatcaaagtgaaaaccaaaaat 10403507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 308 - 364
Target Start/End: Complemental strand, 43894186 - 43894130
Alignment:
Q  308 ttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    ||||| |||||| |||||||| |||||||||||||||||||| ||||||||||||||    
T  43894186 ttatgtgaccaaattgagacattttatagttaggggaccaaactgaaaaccaaaaat 43894130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 266 - 345
Target Start/End: Complemental strand, 34438529 - 34438450
Alignment:
Q  266 aaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggac 345  Q
    |||||||||| ||||  |||||||||||||||  | ||||||||||| |||||| |||||||| |||||||||| |||||    
T  34438529 aaaaactaacagagagaaccaaaatagtaaacggcagaagatttatgggaccaaattgagacactttatagttaagggac 34438450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 266 - 357
Target Start/End: Original strand, 39592282 - 39592373
Alignment:
Q  266 aaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaac 357  Q
    ||||| |||||||||  ||||||| ||||||| || |||||  ||   ||||||||||||||| |||||||||||||||| |||||||||||    
T  39592282 aaaaattaacggagagaaccaaaacagtaaacgacagaagacataatggaccaatttgagacactttatagttaggggactaaagtgaaaac 39592373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 265 - 364
Target Start/End: Original strand, 40146615 - 40146714
Alignment:
Q  265 aaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||||||||||||||||||||| | |||||| |    ||||| ||||| |||||| |||||||| ||||||||||  |||||||| | ||||||||||||    
T  40146615 aaaaaactaacggagatgaccacattagtaatcggaagaagacttatgggaccaaattgagacactttatagttaaaggaccaaaataaaaaccaaaaat 40146714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 265 - 356
Target Start/End: Original strand, 44128326 - 44128417
Alignment:
Q  265 aaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaa 356  Q
    |||| ||||||||||| ||||||||||||||||  |  ||||||||   ||| || |||||||| |||||||||||||||||||| ||||||    
T  44128326 aaaatactaacggagaggaccaaaatagtaaacggcataagatttaaaggactaaattgagacactttatagttaggggaccaaattgaaaa 44128417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 266 - 364
Target Start/End: Original strand, 15446663 - 15446761
Alignment:
Q  266 aaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    ||||||||||||||| ||||||||||||||||    ||| ||||||| |||||| |||| ||| |||||| ||||  ||||||| ||||| ||||||||    
T  15446663 aaaaactaacggagaggaccaaaatagtaaacggtagaaaatttatgggaccaaattgaaacactttataattagatgaccaaaatgaaatccaaaaat 15446761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 223 - 365
Target Start/End: Original strand, 29665524 - 29665665
Alignment:
Q  223 tgcaatcgaatggttgaaattatatcagaaatgttacacattaaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaattt 322  Q
    ||||||| ||||||| |||| | |||| |||  ||| ||||||||||| ||||||||||||| | | ||||||||    ||| | ||||| |||||| ||    
T  29665524 tgcaatcaaatggttaaaatcacatcaaaaaatttagacattaaaaaattaacggagatgactacattagtaaacggaggaaaacttatgggaccaaatt 29665623  T
Q  323 gagacagtttatagttaggggaccaaagtgaaaaccaaaaatt 365  Q
     ||||| ||||||||||||||| |||| ||||||| |||||||    
T  29665624 aagaca-tttatagttaggggatcaaaatgaaaacaaaaaatt 29665665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 262 - 364
Target Start/End: Original strand, 56297668 - 56297770
Alignment:
Q  262 attaaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaa 361  Q
    ||||||||||||||||||| ||||| | |||||||||  || | | |||||||||||| ||||||||||||| | ||| |||| |||| |||||  ||||    
T  56297668 attaaaaaactaacggagaggaccacattagtaaacagatgtatacttatgagaccaaattgagacagtttaaaattaagggatcaaaatgaaattcaaa 56297767  T
Q  362 aat 364  Q
    |||    
T  56297768 aat 56297770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 223 - 340
Target Start/End: Original strand, 307755 - 307872
Alignment:
Q  223 tgcaatcgaatggttgaaattatatcagaaatgttacacattaaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaattt 322  Q
    |||||||  |||||| |||| |||||| |||  ||| |||||||||||| |||||||||||||| |||||||||     ||||| ||||| || ||| ||    
T  307755 tgcaatcatatggttaaaatcatatcaaaaaatttaaacattaaaaaaccaacggagatgaccacaatagtaaatggaggaagacttatgggatcaaatt 307854  T
Q  323 gagacagtttatagttag 340  Q
    |||||| |||||||||||    
T  307855 gagacactttatagttag 307872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 223 - 292
Target Start/End: Complemental strand, 43418199 - 43418130
Alignment:
Q  223 tgcaatcgaatggttgaaattatatcagaaatgttacacattaaaaaactaacggagatgaccaaaatag 292  Q
    ||||||| |||||||||||| | |||| |||| ||| ||||||||| |||||||||||||||| ||||||    
T  43418199 tgcaatcaaatggttgaaatcaaatcaaaaatattagacattaaaatactaacggagatgaccgaaatag 43418130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 251 - 364
Target Start/End: Original strand, 52981128 - 52981241
Alignment:
Q  251 aaatgttacacattaaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaag 350  Q
    |||| ||| |||| ||||||||||| | || |||||||| |||||||||| |||||  || | ||||| ||||| ||| || |||||| ||||||||||     
T  52981128 aaatattagacataaaaaaactaactgcgaggaccaaaacagtaaacaacagaagacataagggaccagtttgaaacacttgatagtttggggaccaaaa 52981227  T
Q  351 tgaaaaccaaaaat 364  Q
    ||||||| ||||||    
T  52981228 tgaaaactaaaaat 52981241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 308 - 364
Target Start/End: Complemental strand, 15787033 - 15786977
Alignment:
Q  308 ttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    ||||| |||||| |||||||||||||||||||||||| |||| ||||||| ||||||    
T  15787033 ttatgggaccaaattgagacagtttatagttaggggaacaaaatgaaaacaaaaaat 15786977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 240 - 364
Target Start/End: Original strand, 35789557 - 35789681
Alignment:
Q  240 aattatatcagaaatgttacacattaaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagtta 339  Q
    |||||||| | |||| ||| |||| |||||| |||| | ||||||||||||||  ||| ||  || || || | || || ||||| ||| ||||||||||    
T  35789557 aattatattaaaaatattagacataaaaaaattaactgtgatgaccaaaatagataacgacaaaaaatataagggatcagtttgaaacactttatagtta 35789656  T
Q  340 ggggaccaaagtgaaaaccaaaaat 364  Q
     ||||||||||||||||||||||||    
T  35789657 cgggaccaaagtgaaaaccaaaaat 35789681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 314 - 357
Target Start/End: Original strand, 96722 - 96765
Alignment:
Q  314 gaccaatttgagacagtttatagttaggggaccaaagtgaaaac 357  Q
    ||||||||| ||||| ||||||||||||||||||||||||||||    
T  96722 gaccaatttaagacactttatagttaggggaccaaagtgaaaac 96765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 301 - 364
Target Start/End: Complemental strand, 26376417 - 26376354
Alignment:
Q  301 tgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||||| ||||| |||||| |||||||  ||||||||||||||| |||| ||||||||||||||    
T  26376417 tgaagacttatgggaccaaattgagacgttttatagttaggggatcaaaatgaaaaccaaaaat 26376354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 218 - 357
Target Start/End: Original strand, 38371750 - 38371889
Alignment:
Q  218 agacctgcaatcgaatggttgaaattatatcagaaatgttacacattaaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagacc 317  Q
    |||||||||||||||||||| ||||| ||||| || | ||| |||| ||||||||| | ||||| || |||||||  ||| ||  ||||  || | || |    
T  38371750 agacctgcaatcgaatggtttaaattgtatcaaaattattagacatcaaaaaactatcagagataactaaaataggtaacgacaaaagacataagggatc 38371849  T
Q  318 aatttgagacagtttatagttaggggaccaaagtgaaaac 357  Q
    ||||||||||  ||| ||||||||||| |||| |||||||    
T  38371850 aatttgagacgttttttagttaggggatcaaactgaaaac 38371889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 301 - 364
Target Start/End: Complemental strand, 40143742 - 40143679
Alignment:
Q  301 tgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||||| |||||||| ||| |||||||| |||||||||||||||| ||| ||||||| ||||||    
T  40143742 tgaagagttatgagagcaaattgagacactttatagttaggggactaaaatgaaaactaaaaat 40143679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 282 - 364
Target Start/End: Complemental strand, 55952932 - 55952850
Alignment:
Q  282 gaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||||||||| ||||| ||  |||| |||||||||||| |||| ||| |||||||||||||||| ||| | |||| |||||||    
T  55952932 gaccaaaataataaacgacataagagttatgagaccaaattgaaacactttatagttaggggactaaattaaaaatcaaaaat 55952850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 218 - 287
Target Start/End: Complemental strand, 2292321 - 2292252
Alignment:
Q  218 agacctgcaatcgaatggttgaaattatatcagaaatgttacacattaaaaaactaacggagatgaccaa 287  Q
    |||| |||||||  |||||||||||||||||| |||| |||  ||||||||||||||| |||| ||||||    
T  2292321 agacatgcaatctgatggttgaaattatatcaaaaatattagtcattaaaaaactaacagagaggaccaa 2292252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 266 - 339
Target Start/End: Complemental strand, 17319165 - 17319092
Alignment:
Q  266 aaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagtta 339  Q
    |||||||||||| || ||||||||||||||||  | |||||||||||  ||||| |||| ||| ||||||||||    
T  17319165 aaaaactaacggtgaagaccaaaatagtaaacgccagaagatttatggaaccaaattgaaacactttatagtta 17319092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 268 - 364
Target Start/End: Original strand, 526714 - 526810
Alignment:
Q  268 aaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    ||||||||||||| |||||||| ||  |||| | || ||  || | |||||| |||||||| |||||||||||||||||||| ||||| || |||||    
T  526714 aaactaacggagaggaccaaaagaggtaacatcagatgacataagggaccaagttgagacactttatagttaggggaccaaaatgaaatccgaaaat 526810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 266 - 326
Target Start/End: Original strand, 6140353 - 6140413
Alignment:
Q  266 aaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgaga 326  Q
    ||||||||||||| |||||||||||||||||| || ||||| |||||  ||||| ||||||    
T  6140353 aaaaactaacggaaatgaccaaaatagtaaacgacagaagagttatggaaccaaattgaga 6140413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 312 - 364
Target Start/End: Complemental strand, 15445513 - 15445461
Alignment:
Q  312 gagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||||||| |||||||| |||||| ||||||||||||| ||||| ||||||||    
T  15445513 gagaccaaattgagacactttataattaggggaccaaaatgaaatccaaaaat 15445461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 268 - 364
Target Start/End: Complemental strand, 29833493 - 29833397
Alignment:
Q  268 aaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    ||||||||||||| |||||||| ||  ||| ||  ||||| || | |||||| |||||||| |||||| ||||||||||||| ||||| || |||||    
T  29833493 aaactaacggagaggaccaaaagaggtaacgacaaaagatataagggaccaaattgagacattttataattaggggaccaaaatgaaatccgaaaat 29833397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 198 - 349
Target Start/End: Complemental strand, 3528381 - 3528230
Alignment:
Q  198 ggttcactattgtatataacagacctgcaatcgaatggttgaaattatatcagaaatgttacacattaaaaaactaacggagatgaccaaaatagtaaac 297  Q
    |||||||||||  ||| ||  ||| ||||||| ||||||| |||| | || | |||  ||| ||||||||||||||| ||||| ||| | | ||||||||    
T  3528381 ggttcactattagatacaatggacatgcaatcaaatggttaaaatcacataaaaaaaattagacattaaaaaactaatggagaggactacattagtaaac 3528282  T
Q  298 aactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaa 349  Q
    |   ||| | ||||| |||||| |||||||| |||||||||| || ||||||    
T  3528281 agaggaaaacttatgggaccaaattgagacactttatagttaaggaaccaaa 3528230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 194 - 253
Target Start/End: Original strand, 20827442 - 20827501
Alignment:
Q  194 tgatggttcactattgtatataacagacctgcaatcgaatggttgaaattatatcagaaa 253  Q
    |||||||||||||||| ||||||   || ||||||| ||||||| |||||||||||||||    
T  20827442 tgatggttcactattggatataatgaacttgcaatcaaatggttaaaattatatcagaaa 20827501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 285 - 364
Target Start/End: Complemental strand, 29663746 - 29663668
Alignment:
Q  285 caaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||||| ||||||  | ||||| ||||| |||||| |||||||| |||||||||| |||| |||| ||||||||||||||    
T  29663746 caaaatggtaaacggcagaagagttatgggaccaaattgagacaatttatagtta-gggatcaaaatgaaaaccaaaaat 29663668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 266 - 349
Target Start/End: Complemental strand, 50530626 - 50530543
Alignment:
Q  266 aaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaa 349  Q
    ||||| |||| || |||||||||||||||||| |  ||||| ||||| ||||| ||||||||| || |||||||  ||||||||    
T  50530626 aaaaattaacagaaatgaccaaaatagtaaacgatagaagagttatgggaccattttgagacacttaatagttaaaggaccaaa 50530543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 314 - 364
Target Start/End: Complemental strand, 306652 - 306602
Alignment:
Q  314 gaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||||| |||| |||||||| ||||||||||||||| ||||| ||||||||    
T  306652 gaccaaattgaaacagtttaaagttaggggaccaaattgaaatccaaaaat 306602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 314 - 364
Target Start/End: Original strand, 12396915 - 12396965
Alignment:
Q  314 gaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||||| |||||||| |||||||||||||||||||| ||||| || |||||    
T  12396915 gaccaaattgagacactttatagttaggggaccaaaatgaaatccgaaaat 12396965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 314 - 364
Target Start/End: Complemental strand, 26428731 - 26428681
Alignment:
Q  314 gaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||||| ||||||||||||| ||||||||||||||| |||||  |||||||    
T  26428731 gaccaaattgagacagtttaaagttaggggaccaaactgaaattcaaaaat 26428681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 314 - 364
Target Start/End: Original strand, 28370682 - 28370732
Alignment:
Q  314 gaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||||| ||||||||||||| |||||| |||||||| ||||| ||||||||    
T  28370682 gaccaaattgagacagtttaaagttagaggaccaaattgaaatccaaaaat 28370732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 266 - 324
Target Start/End: Original strand, 38419010 - 38419068
Alignment:
Q  266 aaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttga 324  Q
    ||||||||||||||||||| |||| |||||||  | ||||| |||||||||||| ||||    
T  38419010 aaaaactaacggagatgactaaaacagtaaacggcagaagacttatgagaccaaattga 38419068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 266 - 364
Target Start/End: Original strand, 38555269 - 38555367
Alignment:
Q  266 aaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    ||||||||||||| |||||||   ||||||||    ||||| || || |||||| || | ||| |||||||||||||||||||||| ||||| ||||||    
T  38555269 aaaaactaacggaaatgaccacgttagtaaacggaggaagacttctgtgaccaaattaatacactttatagttaggggaccaaagtaaaaactaaaaat 38555367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 314 - 364
Target Start/End: Original strand, 39135551 - 39135601
Alignment:
Q  314 gaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||||| ||||||||||||| ||||||||||| ||| ||||| ||||||||    
T  39135551 gaccaaattgagacagtttaaagttaggggactaaattgaaatccaaaaat 39135601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 314 - 364
Target Start/End: Complemental strand, 46794915 - 46794865
Alignment:
Q  314 gaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||||| |||| |||||||| ||||||||||||||| ||||| ||||||||    
T  46794915 gaccaaattgaaacagtttaaagttaggggaccaaattgaaatccaaaaat 46794865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 364
Target Start/End: Complemental strand, 56000394 - 56000312
Alignment:
Q  282 gaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    ||||||||| ||||||  | ||||| ||||  ||| || |||||||| ||||||||||||||| |||| |||||| |||||||    
T  56000394 gaccaaaatggtaaacggcagaagagttataggactaaattgagacactttatagttaggggatcaaaatgaaaatcaaaaat 56000312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 314 - 355
Target Start/End: Original strand, 2310823 - 2310864
Alignment:
Q  314 gaccaatttgagacagtttatagttaggggaccaaagtgaaa 355  Q
    |||||| |||||||| |||||||||||||||||||| |||||    
T  2310823 gaccaaattgagacattttatagttaggggaccaaaatgaaa 2310864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 364
Target Start/End: Original strand, 26202421 - 26202477
Alignment:
Q  308 ttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    ||||| |||||| ||||||||||||| ||||| ||||||||| |||||  |||||||    
T  26202421 ttatgggaccaaattgagacagtttaaagttaagggaccaaaatgaaattcaaaaat 26202477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 95; Significance: 2e-46; HSPs: 2)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 126 - 364
Target Start/End: Complemental strand, 22385 - 22153
Alignment:
Q  126 tgaattttgtatgaatatgaagaagtggtggacggaataagatgaagagagggnnnnnnnttatgtggtgatggttcactattgtatataacagacctgc 225  Q
    ||||||||||||||||||||||   ||||||| |||| |||||||||||||||       |||  ||||||||||||||| ||||||||||   |||||     
T  22385 tgaattttgtatgaatatgaag---tggtggaaggaagaagatgaagagagggaaaaaa-ttacatggtgatggttcactgttgtatataatgtacctgg 22290  T
Q  226 aatcgaatggttgaaattatatcagaaatgttacacattaaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgag 325  Q
    |||| |||||| ||||| ||||||||||||||| ||||||||||| |||||||||||||||||||||||||| || ||||||||||| || ||| |||||    
T  22289 aatc-aatggtggaaatcatatcagaaatgttagacattaaaaaattaacggagatgaccaaaatagtaaacgacagaagatttatgtgaacaaattgag 22191  T
Q  326 acagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    ||| |||||||||| | || ||||||||||| |||||||    
T  22190 acattttatagtta-gagatcaaagtgaaaatcaaaaat 22153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 302 - 364
Target Start/End: Original strand, 39930 - 39992
Alignment:
Q  302 gaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    ||||||||||| |||||| |||||||| |||||| ||||||||||||||||||| ||||||||    
T  39930 gaagatttatgggaccaaattgagacactttatacttaggggaccaaagtgaaatccaaaaat 39992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 86; Significance: 5e-41; HSPs: 60)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 211 - 364
Target Start/End: Original strand, 5384284 - 5384437
Alignment:
Q  211 atataacagacctgcaatcgaatggttgaaattatatcagaaatgttacacattaaaaaactaacggagatgaccaaaatagtaaacaactgaagattta 310  Q
    |||||| ||| || ||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||| ||||||||||||||||    |||||||||    
T  5384284 atataatagatctacaatcgaatggttgaaattatatcaaaaatattaaacattaaaaaactaacggagaggaccaaaatagtaaacggacgaagattta 5384383  T
Q  311 tgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    || |||||| |||||||| ||||||||||||||| |||| |||||| |||||||    
T  5384384 tgggaccaaattgagacactttatagttaggggatcaaattgaaaatcaaaaat 5384437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 219 - 364
Target Start/End: Complemental strand, 1273259 - 1273114
Alignment:
Q  219 gacctgcaatcgaatggttgaaattatatcagaaatgttacacattaaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagacca 318  Q
    |||||||||||||||||||||||| |||||| |||| ||| ||||||||||||||||||||  ||||||||| ||||||  | ||||||||||| |||||    
T  1273259 gacctgcaatcgaatggttgaaatcatatcaaaaatattaaacattaaaaaactaacggaggggaccaaaattgtaaactgcagaagatttatgggacca 1273160  T
Q  319 atttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    | |||||||| ||||||||||  |||||||| ||||||||||||||    
T  1273159 aattgagacattttatagttaaaggaccaaaatgaaaaccaaaaat 1273114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 219 - 364
Target Start/End: Original strand, 12936048 - 12936193
Alignment:
Q  219 gacctgcaatcgaatggttgaaattatatcagaaatgttacacattaaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagacca 318  Q
    |||| ||||||||||||||||||  |||| | ||||  || |||||||||||| |||||| ||||||||||| ||||||| |  |||| ||||  |||||    
T  12936048 gaccagcaatcgaatggttgaaacaatataaaaaatagtaaacattaaaaaacaaacggaaatgaccaaaatggtaaacagcataagacttattggacca 12936147  T
Q  319 atttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    | |||||||| |||||||||||||||||||| ||||||||||||||    
T  12936148 aattgagacactttatagttaggggaccaaaatgaaaaccaaaaat 12936193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 219 - 364
Target Start/End: Complemental strand, 19524152 - 19524008
Alignment:
Q  219 gacctgcaatcgaatggttgaaattatatcagaaatgttacacattaaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagacca 318  Q
    ||||||||||||||||||  |||  |||||| || | ||| |||||||||||| |||||| ||||||||||| |||||| || ||| |||||| ||||||    
T  19524152 gacctgcaatcgaatggtcaaaacaatatcaaaattattagacattaaaaaacaaacggacatgaccaaaatggtaaacgacagaaaatttat-agacca 19524054  T
Q  319 atttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    | |||||||| |||||||||| ||||||||| ||||||||||||||    
T  19524053 aattgagacactttatagttaagggaccaaattgaaaaccaaaaat 19524008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 220 - 364
Target Start/End: Original strand, 18695594 - 18695738
Alignment:
Q  220 acctgcaatcgaatggttgaaattatatcagaaatgttacacattaaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaa 319  Q
    |||||||||| || ||||||||  |||||| |||| ||| ||||||||||||||||||||||||||| | ||||||||   |||||| ||||| ||||||    
T  18695594 acctgcaatcaaacggttgaaaacatatcaaaaattttagacattaaaaaactaacggagatgaccatattagtaaacggatgaagacttatgggaccaa 18695693  T
Q  320 tttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
     |||||||| |||||||||| ||||  ||| ||||||||||||||    
T  18695694 attgagacactttatagttaagggaataaaatgaaaaccaaaaat 18695738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 218 - 349
Target Start/End: Original strand, 15857563 - 15857694
Alignment:
Q  218 agacctgcaatcgaatggttgaaattatatcagaaatgttacacattaaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagacc 317  Q
    |||| |||||| ||||||||| ||| |||||| |||| ||| ||||||||||||||||||||||||||||||| |||||| ||  |||||||||| || |    
T  15857563 agacttgcaattgaatggttggaatcatatcaaaaatattaaacattaaaaaactaacggagatgaccaaaatggtaaacgacataagatttatgggaac 15857662  T
Q  318 aatttgagacagtttatagttaggggaccaaa 349  Q
    || |||| ||| |||||||||| |||||||||    
T  15857663 aaattgaaacactttatagttaagggaccaaa 15857694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 219 - 356
Target Start/End: Original strand, 22812332 - 22812470
Alignment:
Q  219 gacctgcaatcgaatggttgaaattatatcagaaatgttacacattaaaa-aactaacggagatgaccaaaatagtaaacaactgaagatttatgagacc 317  Q
    |||||||||||||||||||||||| |||||| |||| ||| ||||||||| |||||||||||  ||||||||||||||||  | ||||||||||| || |    
T  22812332 gacctgcaatcgaatggttgaaatcatatcaaaaatattaaacattaaaaaaactaacggaggggaccaaaatagtaaactgcagaagatttatgggatc 22812431  T
Q  318 aatttgagacagtttatagttaggggaccaaagtgaaaa 356  Q
    ||  ||||||| |||||||||| ||||| ||| ||||||    
T  22812432 aaagtgagacattttatagttaagggactaaaatgaaaa 22812470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 219 - 364
Target Start/End: Original strand, 12950206 - 12950351
Alignment:
Q  219 gacctgcaatcgaatggttgaaattatatcagaaatgttacacattaaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagacca 318  Q
    |||| |||||| |||||||||||  |||| | ||||  || |||||||||||| |||||| ||||||||||| ||||||| |  |||| ||||  |||||    
T  12950206 gaccagcaatcaaatggttgaaacaatataaaaaatagtaaacattaaaaaacaaacggaaatgaccaaaatggtaaacatcataagacttattggacca 12950305  T
Q  319 atttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    | |||||||| |||||||||||||||||||| ||||||||| ||||    
T  12950306 aattgagacactttatagttaggggaccaaaatgaaaaccataaat 12950351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 219 - 364
Target Start/End: Original strand, 19827086 - 19827231
Alignment:
Q  219 gacctgcaatcgaatggttgaaattatatcagaaatgttacacattaaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagacca 318  Q
    ||||||||||| |||||| ||||  |||||| |||  ||| |||||||||||| ||||||  |||||||||| ||||||    ||||||||||| |||||    
T  19827086 gacctgcaatcaaatggtcgaaacaatatcaaaaaatttagacattaaaaaacaaacggatgtgaccaaaatggtaaacggaagaagatttatgggacca 19827185  T
Q  319 atttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    | |||||||| |||||| ||| ||||||||| ||||||||||||||    
T  19827186 aattgagacactttataattatgggaccaaattgaaaaccaaaaat 19827231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 223 - 349
Target Start/End: Complemental strand, 5975922 - 5975796
Alignment:
Q  223 tgcaatcgaatggttgaaattatatcagaaatgttacacattaaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaattt 322  Q
    ||||||| ||||||| |||| |||||| |||  ||| |||||||||||||||| ||||  |||| |||||||||||   ||||| |||||||||||| ||    
T  5975922 tgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaacagagagaaccacaatagtaaacagaggaagacttatgagaccaaatt 5975823  T
Q  323 gagacagtttatagttaggggaccaaa 349  Q
    |||||| |||||| |||||||||||||    
T  5975822 gagacactttataattaggggaccaaa 5975796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 266 - 364
Target Start/End: Complemental strand, 40058141 - 40058043
Alignment:
Q  266 aaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    ||||||||||||||||||||||||| ||||||  | ||||| ||||||||||||||||| ||| || ||||||| |||| |||| ||||||||||||||    
T  40058141 aaaaactaacggagatgaccaaaatggtaaacggcagaagagttatgagaccaatttgaaacacttaatagttaagggatcaaaatgaaaaccaaaaat 40058043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 283 - 364
Target Start/End: Original strand, 27894033 - 27894114
Alignment:
Q  283 accaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    ||||||||||||||| || ||| |||||||||||||| |||| ||| |||||||||||||||||||||||||||| ||||||    
T  27894033 accaaaatagtaaacgacggaaaatttatgagaccaaattgaaacactttatagttaggggaccaaagtgaaaacaaaaaat 27894114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 231 - 357
Target Start/End: Original strand, 224548 - 224674
Alignment:
Q  231 aatggttgaaattatatcagaaatgttacacattaaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagt 330  Q
    ||||||| || | |||||| |||  ||| ||||||||||||||||||||||||| | | |||||| |    ||||| |||||||||||| |||||||| |    
T  224548 aatggttaaagtcatatcaaaaaatttagacattaaaaaactaacggagatgactacattagtaatcggaggaagacttatgagaccaaattgagacact 224647  T
Q  331 ttatagttaggggaccaaagtgaaaac 357  Q
    ||||||||||||||||||| |||||||    
T  224648 ttatagttaggggaccaaaatgaaaac 224674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 266 - 364
Target Start/End: Complemental strand, 5383065 - 5382967
Alignment:
Q  266 aaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    ||||||||||||||| || ||||||||||||| ||  |||||||||| |||||| |||||||| |||||| ||||| |||||||  |||||||||||||    
T  5383065 aaaaactaacggagaggatcaaaatagtaaacgaccaaagatttatgggaccaaattgagacactttataattaggagaccaaatagaaaaccaaaaat 5382967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 282 - 364
Target Start/End: Complemental strand, 18678083 - 18678001
Alignment:
Q  282 gaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    ||||||||  |||||| || ||||||||||| |||||| |||||||| ||||||||||||||| |||||||||||||||||||    
T  18678083 gaccaaaacggtaaacgacagaagatttatgggaccaaattgagacactttatagttaggggatcaaagtgaaaaccaaaaat 18678001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 266 - 364
Target Start/End: Original strand, 19525281 - 19525379
Alignment:
Q  266 aaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||||| |||||||| ||||||||| ||||||  | ||||| ||||| |||||| | |||||| |||||||||||||||||||| ||||||||||||||    
T  19525281 aaaaacaaacggagaggaccaaaatggtaaacggcagaagacttatgtgaccaaatggagacactttatagttaggggaccaaattgaaaaccaaaaat 19525379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 266 - 356
Target Start/End: Complemental strand, 42510237 - 42510147
Alignment:
Q  266 aaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaa 356  Q
    |||||||||||||||  |||||||||||||||  | ||||||||||| |||||| |||||||| |||||||||| ||||||||| ||||||    
T  42510237 aaaaactaacggagagaaccaaaatagtaaacggcagaagatttatgggaccaaattgagacactttatagttaagggaccaaactgaaaa 42510147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 218 - 355
Target Start/End: Original strand, 38473500 - 38473637
Alignment:
Q  218 agacctgcaatcgaatggttgaaattatatcagaaatgttacacattaaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagacc 317  Q
    |||||||||||| | ||||| |||| ||||||  | |  || ||||||||||| ||||||| |||||||||||||||||| || ||||||||||| ||||    
T  38473500 agacctgcaatcaagtggttaaaatgatatcaagattaatatacattaaaaaattaacggaaatgaccaaaatagtaaacgacagaagatttatgggacc 38473599  T
Q  318 aatttgagacagtttatagttaggggaccaaagtgaaa 355  Q
    || || ||||| |||| ||||||  ||||||| |||||    
T  38473600 aaattaagacactttacagttagatgaccaaaatgaaa 38473637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 265 - 364
Target Start/End: Complemental strand, 15613629 - 15613530
Alignment:
Q  265 aaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||||| ||||||||| ||||||||||||||||    ||||||||||| |||||| |||||||| |||||||||||  ||||||| ||||| ||||||||    
T  15613629 aaaaaattaacggagaggaccaaaatagtaaacggaagaagatttatgggaccaaattgagacactttatagttagaagaccaaaatgaaatccaaaaat 15613530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 194 - 286
Target Start/End: Original strand, 8188121 - 8188213
Alignment:
Q  194 tgatggttcactattgtatataacagacctgcaatcgaatggttgaaattatatcagaaatgttacacattaaaaaactaacggagatgacca 286  Q
    ||||||||||| |||  ||||||  ||| ||||||| ||||||| |||| ||||||||||| ||| ||||||||||||||||||||| |||||    
T  8188121 tgatggttcaccattaaatataatggacatgcaatcaaatggttaaaatcatatcagaaattttagacattaaaaaactaacggagaggacca 8188213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 268 - 364
Target Start/End: Original strand, 15614955 - 15615051
Alignment:
Q  268 aaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||||||| |||| ||||||||||||||||  | ||| |||||||  ||||| |||||||| ||||||||||| |||||||| ||||| ||||||||    
T  15614955 aaactaacagagaggaccaaaatagtaaacggcagaaaatttatggaaccaaattgagacactttatagttagcggaccaaaatgaaatccaaaaat 15615051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 272 - 364
Target Start/End: Complemental strand, 26403424 - 26403332
Alignment:
Q  272 taacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||| |||| |||||||||||||||| ||  || |||||||||| ||| |||||||| |||||||||| ||||||||| |||||| |||||||    
T  26403424 taacagagaagaccaaaatagtaaacgacataaaatttatgagatcaaattgagacactttatagttaagggaccaaattgaaaatcaaaaat 26403332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 265 - 364
Target Start/End: Original strand, 10085837 - 10085936
Alignment:
Q  265 aaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||| ||||||||||| ||||||||||||||| | | ||||||||||| |||||| |||| ||| |||| ||||| | |||||||||||||  |||||||    
T  10085837 aaaatactaacggagaggaccaaaatagtaaatagcagaagatttatgggaccaaattgaaacactttaaagttaagagaccaaagtgaaattcaaaaat 10085936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 225 - 356
Target Start/End: Original strand, 42511618 - 42511749
Alignment:
Q  225 caatcgaatggttgaaattatatcagaaatgttacacattaaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttga 324  Q
    ||||| ||||| |||||| ||||  ||||| ||| |||||| ||||| |||||||||  ||||||||| ||||  | |||||||||||  | ||| ||||    
T  42511618 caatctaatggctgaaatcatatttgaaatattatacattagaaaaccaacggagatagccaaaataggaaacggcagaagatttatggaagcaaattga 42511717  T
Q  325 gacagtttatagttaggggaccaaagtgaaaa 356  Q
    |||| |||||||||| ||||||||| ||||||    
T  42511718 gacactttatagttaagggaccaaactgaaaa 42511749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 218 - 319
Target Start/End: Original strand, 32735424 - 32735525
Alignment:
Q  218 agacctgcaatcgaatggttgaaattatatcagaaatgttacacattaaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagacc 317  Q
    |||||||||||| ||  ||||||||||||| | |||| ||| ||||||||| |||||| ||||||||||||||| |||||  | ||||| ||||| ||||    
T  32735424 agacctgcaatcaaactgttgaaattatataaaaaatattagacattaaaatactaacagagatgaccaaaataataaacggcagaagagttatgggacc 32735523  T
Q  318 aa 319  Q
    ||    
T  32735524 aa 32735525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 272 - 364
Target Start/End: Complemental strand, 1663304 - 1663212
Alignment:
Q  272 taacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    ||||||||| ||||||||||||||||  | ||||||||||  |||||| || ||||| ||||||||||  ||| |||||||||| ||||||||    
T  1663304 taacggagaagaccaaaatagtaaacggcagaagatttataggaccaaattaagacactttatagttaatggatcaaagtgaaatccaaaaat 1663212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 273 - 364
Target Start/End: Complemental strand, 12933867 - 12933776
Alignment:
Q  273 aacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||||| | |||| |||| ||||||  | ||||| |||||||| ||| |||||||| ||||||||||||||| |||| ||||||||||||||    
T  12933867 aacggaaaggaccgaaatggtaaacggcagaagacttatgagatcaaattgagacactttatagttaggggatcaaaatgaaaaccaaaaat 12933776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 273 - 364
Target Start/End: Complemental strand, 42979564 - 42979473
Alignment:
Q  273 aacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||||||| ||||||||||||||||  | ||||| ||||  |||||| |||| ||| ||||||||||| |||||||| ||||| ||||||||    
T  42979564 aacggagaggaccaaaatagtaaacggcagaagaattattggaccaaattgaaacactttatagttagaggaccaaaatgaaatccaaaaat 42979473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 282 - 364
Target Start/End: Complemental strand, 326451 - 326369
Alignment:
Q  282 gaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||||||||  |||||||| |||||||||||  ||||| |||||||| |||||||||  |||| |||| ||||||||||||||    
T  326451 gaccaaaatgataaacaacagaagatttatgcaaccaaattgagacactttatagttgagggatcaaattgaaaaccaaaaat 326369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 314 - 364
Target Start/End: Complemental strand, 6629806 - 6629756
Alignment:
Q  314 gaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    ||||| ||||||||| |||||||||||||||||||||||||||||| ||||    
T  6629806 gaccagtttgagacactttatagttaggggaccaaagtgaaaaccacaaat 6629756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 302 - 364
Target Start/End: Complemental strand, 21387724 - 21387662
Alignment:
Q  302 gaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    ||||||||||| |||||| |||||||| |||||||||||||||||||| |||||  |||||||    
T  21387724 gaagatttatgggaccaaattgagacattttatagttaggggaccaaaatgaaattcaaaaat 21387662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 266 - 356
Target Start/End: Complemental strand, 32734254 - 32734165
Alignment:
Q  266 aaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaa 356  Q
    ||||||||||||| |||||||||||||||||| || ||||| ||||| |||||| || |||||  | ||||||| ||||||||| ||||||    
T  32734254 aaaaactaacggaaatgaccaaaatagtaaacgacagaagagttatgggaccaaattaagaca-ctaatagttaagggaccaaactgaaaa 32734165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 220 - 364
Target Start/End: Original strand, 21389090 - 21389232
Alignment:
Q  220 acctgcaatcgaatggttgaaattatatcagaaatgttacacattaaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaa 319  Q
    |||| ||||| || ||||||||  |||| | |||| ||| ||||||||||||||||||||| ||||| | ||||||||    ||||| ||||| ||||||    
T  21389090 acctacaatcaaacggttgaaaacatataaaaaattttagacattaaaaaactaacggagaggaccatattagtaaacggaggaagacttatgggaccaa 21389189  T
Q  320 tttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
     ||||||||   |||||||| ||||  ||| ||||||||||||||    
T  21389190 attgagaca--ctatagttaagggaaaaaaatgaaaaccaaaaat 21389232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 272 - 356
Target Start/End: Original strand, 8762399 - 8762483
Alignment:
Q  272 taacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaa 356  Q
    ||||||||| ||| |||||||||||| ||  || ||||||| |||||| |||||||| |||||||| | ||||||||| ||||||    
T  8762399 taacggagaggactaaaatagtaaacgacataaaatttatgtgaccaaattgagacattttatagtcatgggaccaaattgaaaa 8762483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 223 - 279
Target Start/End: Original strand, 10978226 - 10978282
Alignment:
Q  223 tgcaatcgaatggttgaaattatatcagaaatgttacacattaaaaaactaacggag 279  Q
    ||||||||||||||| ||||||||||| |||| ||| |||||||||| |||||||||    
T  10978226 tgcaatcgaatggttaaaattatatcaaaaatattaaacattaaaaatctaacggag 10978282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 266 - 349
Target Start/End: Original strand, 12830931 - 12831014
Alignment:
Q  266 aaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaa 349  Q
    ||||| ||||||||| ||||||||||||||||| | ||||| ||||  |||||| |||||||| || ||||||| |||| ||||    
T  12830931 aaaaattaacggagaggaccaaaatagtaaacagcagaagagttataggaccaaattgagacacttaatagttaagggatcaaa 12831014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 266 - 349
Target Start/End: Original strand, 12862911 - 12862994
Alignment:
Q  266 aaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaa 349  Q
    ||||| ||||||||| ||||||||||||||||| | ||||| ||||  |||||| |||||||| || ||||||| |||| ||||    
T  12862911 aaaaattaacggagaggaccaaaatagtaaacagcagaagagttataggaccaaattgagacacttaatagttaagggatcaaa 12862994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 273 - 364
Target Start/End: Complemental strand, 12948028 - 12947937
Alignment:
Q  273 aacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||||| | |||| |||| |||||| ||  |||| |||||||| ||| |||||||| ||||||||||||||| |||| |||||| |||||||    
T  12948028 aacggaaaggaccgaaatggtaaacgacataagacttatgagatcaaattgagacactttatagttaggggatcaaaatgaaaatcaaaaat 12947937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 266 - 349
Target Start/End: Complemental strand, 18693821 - 18693738
Alignment:
Q  266 aaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaa 349  Q
    |||||||||| |||| |||||||| ||  ||| || ||||||||||| |||||  |||||||| |||||||||| |||||||||    
T  18693821 aaaaactaacagagaggaccaaaagaggtaacgacagaagatttatgggaccagattgagacattttatagttaagggaccaaa 18693738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 265 - 364
Target Start/End: Original strand, 40059320 - 40059419
Alignment:
Q  265 aaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||||| |||||||||| ||||||||  |||||  | ||||| ||||  ||||||||| | ||| || |||||||||||| |||| ||||||||||||||    
T  40059320 aaaaaattaacggagatcaccaaaatgataaacggcagaagagttattggaccaatttaaaacacttaatagttaggggatcaaaatgaaaaccaaaaat 40059419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 265 - 364
Target Start/End: Original strand, 42980701 - 42980800
Alignment:
Q  265 aaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||||| ||||||| | ||||||||| |||||   | |||||| ||||||||||| |||||||| ||||||||||  |||||||| ||||| | ||||||    
T  42980701 aaaaaattaacggaaaggaccaaaatggtaaatggcagaagatatatgagaccaaattgagacactttatagttataggaccaaaatgaaatctaaaaat 42980800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 314 - 364
Target Start/End: Complemental strand, 19050824 - 19050774
Alignment:
Q  314 gaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||||| ||||||||||||| ||||||||||||||| ||||| ||||||||    
T  19050824 gaccaaattgagacagtttaaagttaggggaccaaattgaaatccaaaaat 19050774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 314 - 364
Target Start/End: Complemental strand, 41905250 - 41905200
Alignment:
Q  314 gaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    ||||| ||| ||||| |||||||||||||||||||| ||||||||||||||    
T  41905250 gaccagtttaagacattttatagttaggggaccaaaatgaaaaccaaaaat 41905200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 199 - 292
Target Start/End: Original strand, 14212117 - 14212210
Alignment:
Q  199 gttcactattgtatataacagacctgcaatcgaatggttgaaattatatcagaaatgttacacattaaaaaactaacggagatgaccaaaatag 292  Q
    ||||||| |||| |||||  |||||||||||||||||||||||||| || | |||| |||  |||||| ||| ||||| ||| ||| |||||||    
T  14212117 gttcactgttgtgtataatggacctgcaatcgaatggttgaaattacataaaaaatattagccattaagaaattaacgaagaggactaaaatag 14212210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 266 - 319
Target Start/End: Original strand, 22819510 - 22819563
Alignment:
Q  266 aaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaa 319  Q
    ||||||||||||||||||||||||||||||||  | ||||| ||||| ||||||    
T  22819510 aaaaactaacggagatgaccaaaatagtaaacggcagaagagttatgggaccaa 22819563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 268 - 364
Target Start/End: Complemental strand, 4567072 - 4566976
Alignment:
Q  268 aaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||||||| ||||||||||||| ||  ||| || |||||  || | |||||| |||||||| ||||||||||||||| |||| ||||| || |||||    
T  4567072 aaactaacagagatgaccaaaagaggtaacgacagaagacataagggaccaaattgagacactttatagttaggggatcaaaatgaaatccgaaaat 4566976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 272 - 364
Target Start/End: Original strand, 4567973 - 4568065
Alignment:
Q  272 taacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||||||||||||||||||||  ||   | |||||  || | |||||| |||||||| |||||||||||||||||||| ||||| || |||||    
T  4567973 taacggagatgaccaaaataggtaaaggcagaagacataagggaccaaattgagacactttatagttaggggaccaaaatgaaatccgaaaat 4568065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 272 - 319
Target Start/End: Complemental strand, 10084715 - 10084668
Alignment:
Q  272 taacggagatgaccaaaatagtaaacaactgaagatttatgagaccaa 319  Q
    ||||||||| |||||||||||||||| ||  |||||||||||||||||    
T  10084715 taacggagaggaccaaaatagtaaacgacaaaagatttatgagaccaa 10084668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 126 - 173
Target Start/End: Original strand, 15857481 - 15857528
Alignment:
Q  126 tgaattttgtatgaatatgaagaagtggtggacggaataagatgaaga 173  Q
    ||||||| ||||||||||||||||||||| || |||| ||||||||||    
T  15857481 tgaatttggtatgaatatgaagaagtggtagaaggaagaagatgaaga 15857528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 314 - 364
Target Start/End: Original strand, 641921 - 641971
Alignment:
Q  314 gaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||||| ||||||||||||| ||||||||||||||| ||||| | ||||||    
T  641921 gaccaaattgagacagtttaaagttaggggaccaaattgaaatctaaaaat 641971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 306 - 364
Target Start/End: Original strand, 7345423 - 7345481
Alignment:
Q  306 atttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    ||||||| |||||| |||||||| ||||||||||| |||||||| |||||  |||||||    
T  7345423 atttatgggaccaaattgagacactttatagttagaggaccaaaatgaaattcaaaaat 7345481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 314 - 364
Target Start/End: Original strand, 15154108 - 15154158
Alignment:
Q  314 gaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||||| ||||||||||||| ||||||||||||||| |||||  |||||||    
T  15154108 gaccaaattgagacagtttaaagttaggggaccaaattgaaattcaaaaat 15154158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 314 - 364
Target Start/End: Original strand, 22650669 - 22650719
Alignment:
Q  314 gaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||||| |||||||| |||||||||||||||||||| ||||| || |||||    
T  22650669 gaccaaattgagacactttatagttaggggaccaaaatgaaatccgaaaat 22650719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 314 - 364
Target Start/End: Complemental strand, 32412039 - 32411989
Alignment:
Q  314 gaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    ||||||||||||||| |||| ||||| ||||||||| ||||| ||||||||    
T  32412039 gaccaatttgagacaatttaaagttaagggaccaaattgaaatccaaaaat 32411989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 349
Target Start/End: Complemental strand, 15509312 - 15509235
Alignment:
Q  272 taacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaa 349  Q
    ||||||||| |||||||||||  |||  | |||||  || | |||||| |||||||| ||||||||||||||||||||    
T  15509312 taacggagaggaccaaaataggtaacggcagaagacataagggaccaaattgagacactttatagttaggggaccaaa 15509235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 349
Target Start/End: Original strand, 26404209 - 26404286
Alignment:
Q  272 taacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaa 349  Q
    |||||| || |||||||||||||||  ||  |||||||||| || ||| |||||||| ||||||||||  ||||||||    
T  26404209 taacggtgaggaccaaaatagtaaatgacataagatttatgggatcaaattgagacactttatagttaaaggaccaaa 26404286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 125 - 173
Target Start/End: Complemental strand, 1273353 - 1273305
Alignment:
Q  125 ttgaattttgtatgaatatgaagaagtggtggacggaataagatgaaga 173  Q
    |||||||| | |||||||| ||||||||||||| |||| ||||||||||    
T  1273353 ttgaatttggcatgaatataaagaagtggtggaaggaagaagatgaaga 1273305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 364
Target Start/End: Original strand, 1273383 - 1273431
Alignment:
Q  316 ccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||| |||||||| |||||| ||| ||||||||| ||||||||||||||    
T  1273383 ccaaattgagacactttataattaagggaccaaaatgaaaaccaaaaat 1273431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 172
Target Start/End: Original strand, 22812249 - 22812285
Alignment:
Q  136 atgaatatgaagaagtggtggacggaataagatgaag 172  Q
    |||||||||||||||||||||| |||| |||||||||    
T  22812249 atgaatatgaagaagtggtggaaggaagaagatgaag 22812285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 364
Target Start/End: Original strand, 37371218 - 37371274
Alignment:
Q  308 ttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    ||||| |||||| ||||||| ||||||||||| ||||||||| |||||  |||||||    
T  37371218 ttatgggaccaaattgagacggtttatagttaagggaccaaaatgaaattcaaaaat 37371274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 62; Significance: 1e-26; HSPs: 2)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 126 - 364
Target Start/End: Original strand, 24669 - 24906
Alignment:
Q  126 tgaattttgtatgaatatgaagaagtggtggacggaataagatgaagagagggnnnnnnnttatgtggtgatggttcactattgtatataacagacctgc 225  Q
    |||||||||||  ||||||||||||||||||| |||| |||||| ||| ||||       ||  ||| || ||||||| | ||||||| || |||| |||    
T  24669 tgaattttgtaccaatatgaagaagtggtggaaggaagaagatggagaaagggaaaaaatttg-gtgttggtggttcattgttgtatacaatagacatgc 24767  T
Q  226 aatcgaatggttgaaattatatcagaaatgttacacattaaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgag 325  Q
    ||| |||||||| |||| | || | |||| ||| |||||||||||||||||||||||||||||||||  |||    |||||  || | |||||| ||||     
T  24768 aattgaatggttaaaatcacataaaaaatattagacattaaaaaactaacggagatgaccaaaataggtaacggaggaagacataagggaccaaattgaa 24867  T
Q  326 acagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    ||| |||||| ||||||||||||| ||||||||||||||    
T  24868 acactttataattaggggaccaaactgaaaaccaaaaat 24906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 302 - 364
Target Start/End: Complemental strand, 23493 - 23431
Alignment:
Q  302 gaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    ||||| ||||| |||||| |||||||| |||||||||||||||||||| ||||||||||||||    
T  23493 gaagagttatgggaccaaattgagacattttatagttaggggaccaaactgaaaaccaaaaat 23431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1974 (Bit Score: 59; Significance: 7e-25; HSPs: 1)
Name: scaffold1974
Description:

Target: scaffold1974; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 266 - 364
Target Start/End: Original strand, 621 - 719
Alignment:
Q  266 aaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    ||||||||||||||||||||||||| ||||||  | ||||||||||| ||| || |||||||| |||||||||||||||||||||||| ||| ||||||    
T  621 aaaaactaacggagatgaccaaaatggtaaacggcagaagatttatgggactaaattgagacactttatagttaggggaccaaagtgataacaaaaaat 719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1878 (Bit Score: 59; Significance: 7e-25; HSPs: 1)
Name: scaffold1878
Description:

Target: scaffold1878; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 266 - 364
Target Start/End: Complemental strand, 653 - 555
Alignment:
Q  266 aaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    ||||||||||||||||||||||||| ||||||  | ||||||||||| ||| || |||||||| |||||||||||||||||||||||| ||| ||||||    
T  653 aaaaactaacggagatgaccaaaatggtaaacggcagaagatttatgggactaaattgagacactttatagttaggggaccaaagtgataacaaaaaat 555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2127 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold2127
Description:

Target: scaffold2127; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 265 - 364
Target Start/End: Original strand, 507 - 606
Alignment:
Q  265 aaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||| ||||||||||| ||||||||||||||||  |  ||||||||||| ||||| |||||||| ||||||||||||||||| || ||||||||||||||    
T  507 aaaatactaacggagaggaccaaaatagtaaacggcataagatttatgacaccaaattgagacactttatagttaggggacctaattgaaaaccaaaaat 606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 56; Significance: 4e-23; HSPs: 2)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 213 - 356
Target Start/End: Complemental strand, 96336 - 96193
Alignment:
Q  213 ataacagacctgcaatcgaatggttgaaattatatcagaaatgttacacattaaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatg 312  Q
    |||| ||||||||||||||||||| ||||  |||||| |||| ||| | ||||||||||  ||||| ||||||||||| ||||||    ||||||||||     
T  96336 ataatagacctgcaatcgaatggtcgaaaacatatcaaaaatattagatattaaaaaacacacggacatgaccaaaatggtaaacggaagaagatttatc 96237  T
Q  313 agaccaatttgagacagtttatagttaggggaccaaagtgaaaa 356  Q
     || ||| |||||||| |||||||||||||||||||| ||||||    
T  96236 ggatcaaattgagacactttatagttaggggaccaaattgaaaa 96193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 314 - 364
Target Start/End: Original strand, 96856 - 96906
Alignment:
Q  314 gaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||||| |||||||||||||| ||||||||| |||| ||||||||||||||    
T  96856 gaccaaattgagacagtttattgttaggggatcaaattgaaaaccaaaaat 96906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 265 - 364
Target Start/End: Original strand, 2257 - 2356
Alignment:
Q  265 aaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||||||||||||| | |||||||||||||||||   ||||| ||||| |||||| |||| ||| |||||| ||||||||||||| ||||||||||||||    
T  2257 aaaaaactaacggaaaggaccaaaatagtaaacagtagaagagttatgggaccaaattgaaacactttataattaggggaccaaaatgaaaaccaaaaat 2356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 265 - 364
Target Start/End: Original strand, 72978 - 73077
Alignment:
Q  265 aaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||||||||||||||| |||||||| ||  ||| || |||||  || |||||||||||| |||| ||||| |||||||||||||||||||||||||||||    
T  72978 aaaaaactaacggagaggaccaaaagaggtaacgacagaagacataagagaccaatttgtgacactttattgttaggggaccaaagtgaaaaccaaaaat 73077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 51; Significance: 4e-20; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 218 - 364
Target Start/End: Original strand, 48401 - 48547
Alignment:
Q  218 agacctgcaatcgaatggttgaaattatatcagaaatgttacacattaaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagacc 317  Q
    |||||||||||| | ||||| |||||||||||  |||  || |  |||||||| |||||||||||||||||| |||||||  | ||| ||||||| || |    
T  48401 agacctgcaatcaagtggttaaaattatatcaagaataatatattttaaaaaattaacggagatgaccaaaagagtaaacggcagaatatttatgggatc 48500  T
Q  318 aatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    || |||||||| ||||||||||  |||||||| ||||| ||||||||    
T  48501 aaattgagacactttatagttaaaggaccaaaatgaaatccaaaaat 48547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 266 - 364
Target Start/End: Complemental strand, 47193 - 47095
Alignment:
Q  266 aaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    ||||| ||||||||| ||||||||||||||||    ||||||||||| |||||| |||||||| |||| ||||| |||| |||| |||||  |||||||    
T  47193 aaaaattaacggagaggaccaaaatagtaaacggaagaagatttatgggaccaaattgagacaatttaaagttaagggatcaaaatgaaattcaaaaat 47095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 50; Significance: 2e-19; HSPs: 2)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 126 - 292
Target Start/End: Complemental strand, 11968 - 11803
Alignment:
Q  126 tgaattttgtatgaatatgaagaagtggtggacggaataagatgaagagagggnnnnnnnttatgtggtgatggttcactattgtatataacagacctgc 225  Q
    |||||||||||  ||||||||||||||||||| |||| |||||| ||| ||||       ||  ||| || ||||||| | ||||||| || | || |||    
T  11968 tgaattttgtacaaatatgaagaagtggtggaaggaagaagatggagaaagggaaaaattttg-gtgttggtggttcattgttgtatacaataaacatgc 11870  T
Q  226 aatcgaatggttgaaattatatcagaaatgttacacattaaaaaactaacggagatgaccaaaatag 292  Q
    |||||||||||| |||| | |||| |||| ||| ||||||||||||||||||||| |||||||||||    
T  11869 aatcgaatggttaaaatcacatcaaaaatattagacattaaaaaactaacggagaggaccaaaatag 11803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 302 - 364
Target Start/End: Original strand, 13233 - 13295
Alignment:
Q  302 gaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    ||||| ||||| ||| || |||||||| |||||||||||||||||||| ||||||||||||||    
T  13233 gaagagttatgggacgaaattgagacattttatagttaggggaccaaactgaaaaccaaaaat 13295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 272 - 364
Target Start/End: Original strand, 145868 - 145960
Alignment:
Q  272 taacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    ||||||||||||||||||||||||||  |  |||||||||  |||||| || ||||| |||||||||||||||  ||| ||||||||||||||    
T  145868 taacggagatgaccaaaatagtaaacggcataagatttattggaccaaattaagacattttatagttaggggattaaattgaaaaccaaaaat 145960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 269 - 364
Target Start/End: Complemental strand, 13030 - 12935
Alignment:
Q  269 aactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    |||||| |||||| ||||||||| ||||| ||  || |||||||||||||| |||||||| |||||| ||| ||||||||||| |||| |||||||    
T  13030 aactaatggagattaccaaaatactaaacgacaaaatatttatgagaccaaattgagacactttataattatgggaccaaagtaaaaatcaaaaat 12935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 219 - 349
Target Start/End: Original strand, 42292 - 42422
Alignment:
Q  219 gacctgcaatcgaatggttgaaattatatcagaaatgttacacattaaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagacca 318  Q
    ||||||||||| || ||||||||| |||||| |||   || ||||||||| |||||| |||| |||||||||||||||| || ||||||||||| || ||    
T  42292 gacctgcaatcaaacggttgaaatcatatcaaaaaatataaacattaaaatactaacagagaggaccaaaatagtaaacgacagaagatttatgggatca 42391  T
Q  319 atttgagacagtttatagttaggggaccaaa 349  Q
    | |||| |||  | ||||||| |||| ||||    
T  42392 aattgatacacgtaatagttaagggatcaaa 42422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 222 - 362
Target Start/End: Complemental strand, 54758 - 54618
Alignment:
Q  222 ctgcaatcgaatggttgaaattatatcagaaatgttacacattaaaaaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatt 321  Q
    |||||||| || ||||  ||| |||| | |||| ||| |||| |||||||||||||||| ||||| | | |||||||   ||||||||||| |||||| |    
T  54758 ctgcaatcaaacggttataatcatattaaaaatattagacatcaaaaaactaacggagaggaccacattggtaaacagaggaagatttatgggaccaaat 54659  T
Q  322 tgagacagtttatagttaggggaccaaagtgaaaaccaaaa 362  Q
    ||||||| |||||| |||  |||||||| | ||||||||||    
T  54658 tgagacactttataattaaaggaccaaaataaaaaccaaaa 54618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 302 - 364
Target Start/End: Original strand, 56729 - 56791
Alignment:
Q  302 gaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    ||||||||||  |||||| |||||||| |||||| ||||||||||||||||||| | ||||||    
T  56729 gaagatttataggaccaaattgagacactttataattaggggaccaaagtgaaatcaaaaaat 56791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 272 - 364
Target Start/End: Original strand, 77180 - 77272
Alignment:
Q  272 taacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    ||||||||| |||||||| |||||||    ||| ||||||| |||||| |||| ||  |||||||||||| ||||||||||||||| ||||||    
T  77180 taacggagaagaccaaaacagtaaacggtagaatatttatgggaccaaattgaaacgctttatagttaggagaccaaagtgaaaacaaaaaat 77272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0177 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 268 - 364
Target Start/End: Complemental strand, 1876 - 1780
Alignment:
Q  268 aaactaacggagatgaccaaaatagtaaacaactgaagatttatgagaccaatttgagacagtttatagttaggggaccaaagtgaaaaccaaaaat 364  Q
    ||||||||||||| |||||||| ||  ||| || |||||  || | |||||| |||||||| |||||| ||||||||||||| ||||| || |||||    
T  1876 aaactaacggagaggaccaaaagaggtaacgacagaagacataagggaccaaattgagacactttataattaggggaccaaaatgaaatccgaaaat 1780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 314 - 355
Target Start/End: Complemental strand, 25997 - 25956
Alignment:
Q  314 gaccaatttgagacagtttatagttaggggaccaaagtgaaa 355  Q
    |||||| |||||||| |||||||||||||||||||| |||||    
T  25997 gaccaaattgagacactttatagttaggggaccaaaatgaaa 25956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 349
Target Start/End: Complemental strand, 5245 - 5209
Alignment:
Q  313 agaccaatttgagacagtttatagttaggggaccaaa 349  Q
    ||||||| |||||||| ||||||||||||||||||||    
T  5245 agaccaaattgagacactttatagttaggggaccaaa 5209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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