View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1594R-Insertion-14 (Length: 78)
Name: NF1594R-Insertion-14
Description: NF1594R
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1594R-Insertion-14 |
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Alignment Details
Target: chr8 (Bit Score: 68; Significance: 5e-31; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 68; E-Value: 5e-31
Query Start/End: Original strand, 9 - 76
Target Start/End: Complemental strand, 35073195 - 35073128
Alignment:
| Q |
9 |
tcattgccattgatgcagtatcccaaaagggcaaccaaatgtctatgcctaaccttagtaagaacacc |
76 |
Q |
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| T |
35073195 |
tcattgccattgatgcagtatcccaaaagggcaaccaaatgtctatgcctaaccttagtaagaacacc |
35073128 |
T |
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Target: chr3 (Bit Score: 41; Significance: 0.000000000000006; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.000000000000006
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 38160352 - 38160416
Alignment:
| Q |
9 |
tcattgccattgatgcagtatcccaaaagggcaaccaaatgtctatgcctaaccttagtaagaac |
73 |
Q |
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| T |
38160352 |
tcattgccatttatgcagtatcctaaaagagcaaccaaatgcctatgcctaactttagtcagaac |
38160416 |
T |
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