View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15950_low_6 (Length: 345)
Name: NF15950_low_6
Description: NF15950
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15950_low_6 |
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Alignment Details
Target: chr2 (Bit Score: 228; Significance: 1e-126; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 6 - 302
Target Start/End: Original strand, 7214821 - 7215125
Alignment:
| Q |
6 |
caaattagagactcataaatccaaaacccaacttcggaatccgccgttcaaatctttaaactttggcatttcatgtgtaatcggatgagtgtttgtcttc |
105 |
Q |
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| T |
7214821 |
caaattagagactcataaatccaaaacccaacttcggaatccgccgttcaaatctttaaactttggcatttcatgtataaccggatgagtgtttgtcttc |
7214920 |
T |
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| Q |
106 |
aaatcgtcaattttcttcgaaactcaatgtatttccttaaagagtataacatg-------tgtgtgttagaataattatcgct-aaaaaataacctgcac |
197 |
Q |
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||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||| |||||| |||||||||||||||| |
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| T |
7214921 |
aaatcgtcaattttcttcgaaactcaacgtatttccttaaagagtataacatgtgtgtgttgtgtgttagaataatgatcgctaaaaaaataacctgcac |
7215020 |
T |
|
| Q |
198 |
nnnnnnnnnccaaataaacaaccatatgtttgaaaaaatgtgaactaaccttttgtttagtgttgtgaaaggtcttaaaagcgttgtacttgtacaactt |
297 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7215021 |
aaaaaaaaaccaaataaacaaccatatgtttgaaaaaatgtgaactaaccttttgtttagtgttgtgaaaggtcttaaaagcgttgtacttgtacaactt |
7215120 |
T |
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| Q |
298 |
gacat |
302 |
Q |
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||||| |
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| T |
7215121 |
gacat |
7215125 |
T |
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