View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15951_low_10 (Length: 225)
Name: NF15951_low_10
Description: NF15951
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15951_low_10 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 25216263 - 25216487
Alignment:
| Q |
1 |
aaatagggagcatggtaaaaatgtttctcttggagaccaagtgaggtcgaggatcaaacaattctccttgatgaacagattcaaaaagaaagtccttaga |
100 |
Q |
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| T |
25216263 |
aaatagggagcatggtaaaaatgtttctcttggagaccaagtgaggtcgaggatcaaacaattctccttgatgaacagattcaaaaagaaagtccttaga |
25216362 |
T |
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| Q |
101 |
gtaagtttcatcgaatcagttttcatatgcaagtcagggattggtatgtttttacacttctgaattaatttggttctctctttaggtggtggctgataac |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25216363 |
gtaagtttcatcgaatcagttttcatatgcaagtcagggattggtatgtttttacacttctgaattaatttggttctctctttaggtggtggctgataac |
25216462 |
T |
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| Q |
201 |
ttgccagatgaacaaatcgacgggt |
225 |
Q |
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||||||||||||||||||||||||| |
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| T |
25216463 |
ttgccagatgaacaaatcgacgggt |
25216487 |
T |
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