View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15951_low_5 (Length: 432)

Name: NF15951_low_5
Description: NF15951
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15951_low_5
NF15951_low_5
[»] chr5 (20 HSPs)
chr5 (15-151)||(9008505-9008641)
chr5 (289-428)||(9006800-9006939)
chr5 (186-289)||(9006964-9007067)
chr5 (288-343)||(13033123-13033178)
chr5 (288-343)||(13103096-13103151)
chr5 (289-343)||(6126897-6126951)
chr5 (289-343)||(9395423-9395477)
chr5 (289-343)||(17025697-17025751)
chr5 (289-343)||(36563541-36563595)
chr5 (289-343)||(41989410-41989464)
chr5 (288-345)||(4444032-4444089)
chr5 (289-334)||(11795241-11795286)
chr5 (289-334)||(23360015-23360060)
chr5 (289-343)||(21576019-21576073)
chr5 (292-334)||(27081016-27081058)
chr5 (289-343)||(37148958-37149012)
chr5 (289-343)||(37642027-37642081)
chr5 (290-331)||(5174849-5174890)
chr5 (297-334)||(11574161-11574198)
chr5 (300-341)||(23359947-23359988)
[»] chr3 (26 HSPs)
chr3 (288-343)||(46208102-46208157)
chr3 (289-343)||(21295329-21295383)
chr3 (289-345)||(9111495-9111551)
chr3 (289-345)||(42507356-42507412)
chr3 (289-343)||(10298052-10298106)
chr3 (289-343)||(19557055-19557109)
chr3 (289-343)||(38964465-38964519)
chr3 (289-343)||(40690999-40691053)
chr3 (289-343)||(48340470-48340524)
chr3 (289-343)||(49823384-49823438)
chr3 (289-334)||(4238667-4238712)
chr3 (289-334)||(8817398-8817443)
chr3 (289-334)||(17653785-17653830)
chr3 (289-334)||(22722004-22722049)
chr3 (290-343)||(34080033-34080086)
chr3 (289-334)||(37508994-37509039)
chr3 (290-339)||(42170353-42170402)
chr3 (289-332)||(44785410-44785453)
chr3 (289-343)||(2787835-2787889)
chr3 (289-343)||(8437498-8437552)
chr3 (289-343)||(51406746-51406800)
chr3 (290-343)||(2131746-2131799)
chr3 (290-343)||(9213519-9213572)
chr3 (289-334)||(33942944-33942989)
chr3 (290-334)||(1262277-1262321)
chr3 (290-334)||(34988087-34988131)
[»] chr7 (22 HSPs)
chr7 (289-343)||(38063916-38063970)
chr7 (288-343)||(22285771-22285826)
chr7 (288-339)||(36016203-36016254)
chr7 (289-343)||(94321-94375)
chr7 (289-343)||(1738450-1738504)
chr7 (289-343)||(7240822-7240876)
chr7 (289-343)||(7482298-7482352)
chr7 (289-343)||(7661149-7661203)
chr7 (289-343)||(9268829-9268883)
chr7 (288-334)||(33418448-33418494)
chr7 (289-343)||(36583468-36583522)
chr7 (289-343)||(46840933-46840987)
chr7 (289-334)||(38441533-38441578)
chr7 (289-332)||(1565743-1565786)
chr7 (289-332)||(31319413-31319456)
chr7 (289-343)||(23314142-23314196)
chr7 (289-334)||(4790321-4790366)
chr7 (290-332)||(9636129-9636171)
chr7 (289-343)||(28536754-28536808)
chr7 (300-341)||(9268761-9268802)
chr7 (290-331)||(36033241-36033282)
chr7 (291-331)||(28469496-28469536)
[»] chr4 (24 HSPs)
chr4 (289-343)||(42797805-42797859)
chr4 (288-343)||(41469769-41469824)
chr4 (289-343)||(3422133-3422187)
chr4 (289-343)||(6121896-6121950)
chr4 (289-343)||(47833684-47833738)
chr4 (289-343)||(47838620-47838674)
chr4 (290-343)||(51894585-51894638)
chr4 (289-332)||(7579383-7579426)
chr4 (289-343)||(3372194-3372248)
chr4 (289-331)||(3993049-3993091)
chr4 (292-334)||(5986952-5986994)
chr4 (289-343)||(20538689-20538743)
chr4 (289-343)||(24704443-24704497)
chr4 (289-343)||(33621869-33621923)
chr4 (289-343)||(46797798-46797852)
chr4 (289-343)||(48336336-48336390)
chr4 (289-343)||(53337443-53337497)
chr4 (289-334)||(43900622-43900667)
chr4 (289-334)||(52756748-52756793)
chr4 (292-343)||(3904686-3904737)
chr4 (290-340)||(1716373-1716423)
chr4 (290-332)||(13601075-13601117)
chr4 (290-343)||(4780369-4780422)
chr4 (290-331)||(38160387-38160428)
[»] chr1 (22 HSPs)
chr1 (289-334)||(44955218-44955263)
chr1 (289-345)||(9981720-9981776)
chr1 (289-343)||(11796006-11796060)
chr1 (289-343)||(14984910-14984964)
chr1 (289-343)||(25694392-25694446)
chr1 (289-343)||(27159361-27159415)
chr1 (289-343)||(31842798-31842852)
chr1 (289-343)||(39401969-39402023)
chr1 (289-343)||(44668096-44668150)
chr1 (289-343)||(47777484-47777538)
chr1 (292-343)||(12483631-12483682)
chr1 (289-332)||(34042769-34042812)
chr1 (289-332)||(47216713-47216756)
chr1 (289-343)||(1050961-1051015)
chr1 (289-343)||(26471068-26471122)
chr1 (289-331)||(47588352-47588394)
chr1 (290-343)||(11897057-11897110)
chr1 (291-343)||(11897129-11897181)
chr1 (289-343)||(17556826-17556880)
chr1 (290-343)||(16448182-16448235)
chr1 (289-326)||(23278021-23278058)
chr1 (299-343)||(17556755-17556799)
[»] chr8 (20 HSPs)
chr8 (289-343)||(54615-54669)
chr8 (289-343)||(2890165-2890219)
chr8 (289-343)||(6552728-6552782)
chr8 (289-343)||(7785781-7785835)
chr8 (289-343)||(33289264-33289318)
chr8 (289-343)||(39571206-39571260)
chr8 (289-343)||(43199357-43199411)
chr8 (289-334)||(12343152-12343197)
chr8 (289-332)||(15888366-15888409)
chr8 (289-343)||(3304281-3304335)
chr8 (289-343)||(7805702-7805756)
chr8 (289-343)||(12763657-12763711)
chr8 (289-331)||(13578930-13578972)
chr8 (289-343)||(25601003-25601057)
chr8 (289-343)||(32211366-32211420)
chr8 (289-343)||(44498190-44498244)
chr8 (289-334)||(7012244-7012289)
chr8 (289-334)||(31654686-31654731)
chr8 (289-343)||(32114478-32114532)
chr8 (290-334)||(24692052-24692096)
[»] chr6 (19 HSPs)
chr6 (289-343)||(2830408-2830462)
chr6 (289-343)||(6330188-6330242)
chr6 (289-343)||(8099603-8099657)
chr6 (289-343)||(8382972-8383026)
chr6 (289-343)||(9644769-9644823)
chr6 (289-343)||(9650786-9650840)
chr6 (289-343)||(11572148-11572202)
chr6 (289-343)||(13853596-13853650)
chr6 (289-343)||(26602396-26602450)
chr6 (289-334)||(8417805-8417850)
chr6 (289-334)||(28747146-28747191)
chr6 (289-343)||(6068639-6068693)
chr6 (289-334)||(22896535-22896580)
chr6 (289-334)||(33052806-33052851)
chr6 (289-334)||(35031013-35031058)
chr6 (289-332)||(6143627-6143670)
chr6 (292-343)||(14936533-14936584)
chr6 (289-343)||(14936460-14936514)
chr6 (289-334)||(17992061-17992106)
[»] chr2 (24 HSPs)
chr2 (289-343)||(3055631-3055685)
chr2 (289-343)||(6648522-6648576)
chr2 (289-343)||(9047758-9047812)
chr2 (289-343)||(12337940-12337994)
chr2 (289-343)||(13197713-13197767)
chr2 (289-343)||(15896915-15896969)
chr2 (289-343)||(37990016-37990070)
chr2 (289-343)||(38917525-38917579)
chr2 (289-343)||(41478642-41478696)
chr2 (289-343)||(44398759-44398813)
chr2 (290-343)||(15372300-15372353)
chr2 (289-334)||(16243795-16243840)
chr2 (289-334)||(44397620-44397665)
chr2 (289-345)||(44804579-44804635)
chr2 (289-343)||(13344557-13344611)
chr2 (289-343)||(16044320-16044374)
chr2 (292-334)||(23227348-23227390)
chr2 (289-343)||(30099185-30099239)
chr2 (289-343)||(37666613-37666667)
chr2 (289-343)||(41492899-41492953)
chr2 (292-341)||(40714018-40714067)
chr2 (292-343)||(13724105-13724156)
chr2 (290-332)||(20900678-20900720)
chr2 (290-334)||(30985766-30985810)
[»] scaffold1707 (1 HSPs)
scaffold1707 (289-334)||(1408-1453)
[»] scaffold0009 (1 HSPs)
scaffold0009 (292-343)||(49581-49632)
[»] scaffold0482 (1 HSPs)
scaffold0482 (289-343)||(12933-12987)
[»] scaffold0464 (1 HSPs)
scaffold0464 (289-343)||(6134-6188)
[»] scaffold0204 (1 HSPs)
scaffold0204 (289-343)||(23858-23912)


Alignment Details
Target: chr5 (Bit Score: 133; Significance: 5e-69; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 15 - 151
Target Start/End: Complemental strand, 9008641 - 9008505
Alignment:
Q  15 cttcccatctcttggaaccaagcaaggtatcccattctttatctagcaggtaaaatgaaaacacaaattaaataagtcatccctaaaactacatacacaa 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  9008641 cttcccatctcttggaaccaagcaaggtatcccattctttatctagcaggtaaaatgaaaacacaaattaaataagtcatcactaaaactacatacacaa 9008542  T
Q  115 tttgattaccaataattatcaattacgccgtagtgcc 151  Q
    |||||||||||||||||||||||||||||||||||||    
T  9008541 tttgattaccaataattatcaattacgccgtagtgcc 9008505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 289 - 428
Target Start/End: Complemental strand, 9006939 - 9006800
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaataggagcagagggaatgcaagattggttccttcaatgatatgaattcctggttacataa 388  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9006939 tagatacatcaacttttgttgacctaaaagtctgttataaataggagcagagggaatgcaagattggttccttcaatgatatgaattcctggttacataa 9006840  T
Q  389 ccctcatcatcaatactcttttatgtggttcatctcactc 428  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  9006839 ccctcatcatcaatactcttttatgtggttcaactcactc 9006800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 186 - 289
Target Start/End: Complemental strand, 9007067 - 9006964
Alignment:
Q  186 tcacaaataaatgagctcctttttgtcgaaaaaactaattataaactatatactcccagcggtggtcctatttataagagacatctgagtcaacgtatat 285  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  9007067 tcacaaataaatgagctcctttttgtcgaaaaaactaattataaactatatactcccagcggtggtcctatttataagagacatttgagtcaacgtatat 9006968  T
Q  286 tgat 289  Q
    ||||    
T  9006967 tgat 9006964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 288 - 343
Target Start/End: Original strand, 13033123 - 13033178
Alignment:
Q  288 atagatacatcaacttttgttgacctaaaagtctcttataaataggagcagaggga 343  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||| | ||||||    
T  13033123 atagatacatcaacttttgttgacccaaaattctcttataaataggatcggaggga 13033178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 288 - 343
Target Start/End: Original strand, 13103096 - 13103151
Alignment:
Q  288 atagatacatcaacttttgttgacctaaaagtctcttataaataggagcagaggga 343  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||| | ||||||    
T  13103096 atagatacatcaacttttgttgacccaaaattctcttataaataggaccggaggga 13103151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 289 - 343
Target Start/End: Original strand, 6126897 - 6126951
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaataggagcagaggga 343  Q
    |||||||||||||||||||||||| |||| |||||||||||||||| | ||||||    
T  6126897 tagatacatcaacttttgttgacccaaaattctcttataaataggaccggaggga 6126951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 289 - 343
Target Start/End: Original strand, 9395423 - 9395477
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaataggagcagaggga 343  Q
    |||||||||||||||||||||||| |||| |||||||||||||||| | ||||||    
T  9395423 tagatacatcaacttttgttgacccaaaattctcttataaataggaccggaggga 9395477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 289 - 343
Target Start/End: Original strand, 17025697 - 17025751
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaataggagcagaggga 343  Q
    |||||||||||||||||||||||| |||| |||||||||||||||| | ||||||    
T  17025697 tagatacatcaacttttgttgacccaaaattctcttataaataggaccggaggga 17025751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 289 - 343
Target Start/End: Complemental strand, 36563595 - 36563541
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaataggagcagaggga 343  Q
    |||||||||||||||||||||||| |||| |||||||||||||||| | ||||||    
T  36563595 tagatacatcaacttttgttgacccaaaattctcttataaataggaccggaggga 36563541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 289 - 343
Target Start/End: Complemental strand, 41989464 - 41989410
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaataggagcagaggga 343  Q
    |||||||||||||||||||||||| |||| |||||||||||||||| | ||||||    
T  41989464 tagatacatcaacttttgttgacccaaaattctcttataaataggaccggaggga 41989410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 288 - 345
Target Start/End: Original strand, 4444032 - 4444089
Alignment:
Q  288 atagatacatcaacttttgttgacctaaaagtctcttataaataggagcagagggaat 345  Q
    ||||||||||||||||||||||| |||||| ||||||||||||| || | ||||||||    
T  4444032 atagatacatcaacttttgttgatctaaaattctcttataaataagaccggagggaat 4444089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 289 - 334
Target Start/End: Original strand, 11795241 - 11795286
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaatagga 334  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||    
T  11795241 tagatacatcaacttttgttgacccaaaattctcttataaatagga 11795286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 289 - 334
Target Start/End: Original strand, 23360015 - 23360060
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaatagga 334  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||    
T  23360015 tagatacatcaacttttgttgacccaaaattctcttataaatagga 23360060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 289 - 343
Target Start/End: Original strand, 21576019 - 21576073
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaataggagcagaggga 343  Q
    |||||||||||||||||||||| | |||| |||||||||||||||| | ||||||    
T  21576019 tagatacatcaacttttgttgatccaaaattctcttataaataggaccggaggga 21576073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 292 - 334
Target Start/End: Original strand, 27081016 - 27081058
Alignment:
Q  292 atacatcaacttttgttgacctaaaagtctcttataaatagga 334  Q
    ||||||||||||||||||||||||| ||||||| |||||||||    
T  27081016 atacatcaacttttgttgacctaaatgtctcttgtaaatagga 27081058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 289 - 343
Target Start/End: Complemental strand, 37149012 - 37148958
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaataggagcagaggga 343  Q
    |||||||||||||||||||||||| |||| ||| |||||||||||| | ||||||    
T  37149012 tagatacatcaacttttgttgacccaaaattctattataaataggaccggaggga 37148958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 289 - 343
Target Start/End: Original strand, 37642027 - 37642081
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaataggagcagaggga 343  Q
    ||||||||||||||||| |||||| |||| |||||||||||||||| | ||||||    
T  37642027 tagatacatcaacttttattgacccaaaattctcttataaataggaccggaggga 37642081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 290 - 331
Target Start/End: Complemental strand, 5174890 - 5174849
Alignment:
Q  290 agatacatcaacttttgttgacctaaaagtctcttataaata 331  Q
    ||||| ||||||||||||||| ||||| ||||||||||||||    
T  5174890 agatatatcaacttttgttgatctaaatgtctcttataaata 5174849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 297 - 334
Target Start/End: Original strand, 11574161 - 11574198
Alignment:
Q  297 tcaacttttgttgacctaaaagtctcttataaatagga 334  Q
    |||| ||||||||||||||| |||||||||||||||||    
T  11574161 tcaatttttgttgacctaaatgtctcttataaatagga 11574198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 300 - 341
Target Start/End: Complemental strand, 23359988 - 23359947
Alignment:
Q  300 acttttgttgacctaaaagtctcttataaataggagcagagg 341  Q
    |||||||||||||||||  |||||||||||||||| ||||||    
T  23359988 acttttgttgacctaaatttctcttataaataggaccagagg 23359947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 7e-16; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 288 - 343
Target Start/End: Original strand, 46208102 - 46208157
Alignment:
Q  288 atagatacatcaacttttgttgacctaaaagtctcttataaataggagcagaggga 343  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| | ||||||    
T  46208102 atagatacatcaacttttgttgacctaaaattctcttataaataggaccggaggga 46208157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 289 - 343
Target Start/End: Complemental strand, 21295383 - 21295329
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaataggagcagaggga 343  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| | ||||||    
T  21295383 tagatacatcaacttttgttgacctaaaattctcttataaataggaccggaggga 21295329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 289 - 345
Target Start/End: Complemental strand, 9111551 - 9111495
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaataggagcagagggaat 345  Q
    |||||||||||||||||||||||| |||| |||||||||||||||| | ||||||||    
T  9111551 tagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggaat 9111495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 289 - 345
Target Start/End: Complemental strand, 42507412 - 42507356
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaataggagcagagggaat 345  Q
    |||||||||||||||||||||||| |||| |||||||||||||||| | ||||||||    
T  42507412 tagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggaat 42507356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 289 - 343
Target Start/End: Original strand, 10298052 - 10298106
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaataggagcagaggga 343  Q
    |||||||||||||||||||||||| |||| |||||||||||||||| | ||||||    
T  10298052 tagatacatcaacttttgttgacccaaaattctcttataaataggaccggaggga 10298106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 289 - 343
Target Start/End: Complemental strand, 19557109 - 19557055
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaataggagcagaggga 343  Q
    |||||||||||||||||||||||| |||| |||||||||||||||| | ||||||    
T  19557109 tagatacatcaacttttgttgacccaaaattctcttataaataggaccggaggga 19557055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 289 - 343
Target Start/End: Original strand, 38964465 - 38964519
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaataggagcagaggga 343  Q
    |||||||||||||||||||||||| |||| |||||||||||||||| | ||||||    
T  38964465 tagatacatcaacttttgttgaccaaaaattctcttataaataggaccggaggga 38964519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 289 - 343
Target Start/End: Complemental strand, 40691053 - 40690999
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaataggagcagaggga 343  Q
    |||||||||||||||||||||||| |||| |||||||||||||||| | ||||||    
T  40691053 tagatacatcaacttttgttgacccaaaattctcttataaataggaccggaggga 40690999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 289 - 343
Target Start/End: Original strand, 48340470 - 48340524
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaataggagcagaggga 343  Q
    |||||||||||||||||||||||| |||| |||||||||||||||| | ||||||    
T  48340470 tagatacatcaacttttgttgacccaaaattctcttataaataggaccggaggga 48340524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 289 - 343
Target Start/End: Complemental strand, 49823438 - 49823384
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaataggagcagaggga 343  Q
    |||||||||||||||||||||||| |||| |||||||||||||||| | ||||||    
T  49823438 tagatacatcaacttttgttgacccaaaattctcttataaataggaccggaggga 49823384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 289 - 334
Target Start/End: Original strand, 4238667 - 4238712
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaatagga 334  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||    
T  4238667 tagatacatcaacttttgttgaccaaaaattctcttataaatagga 4238712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 289 - 334
Target Start/End: Complemental strand, 8817443 - 8817398
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaatagga 334  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||    
T  8817443 tagatacatcaacttttgttgacccaaaattctcttataaatagga 8817398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 289 - 334
Target Start/End: Original strand, 17653785 - 17653830
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaatagga 334  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||    
T  17653785 tagatacatcaacttttgttgacccaaaattctcttataaatagga 17653830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 289 - 334
Target Start/End: Original strand, 22722004 - 22722049
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaatagga 334  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||    
T  22722004 tagatacatcaacttttgttgacccaaaattctcttataaatagga 22722049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 290 - 343
Target Start/End: Complemental strand, 34080086 - 34080033
Alignment:
Q  290 agatacatcaacttttgttgacctaaaagtctcttataaataggagcagaggga 343  Q
    ||||||||||||||||||||||| |||| |||||||||||||||| | ||||||    
T  34080086 agatacatcaacttttgttgacccaaaattctcttataaataggaccggaggga 34080033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 289 - 334
Target Start/End: Original strand, 37508994 - 37509039
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaatagga 334  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||    
T  37508994 tagatacatcaacttttgttgacccaaaattctcttataaatagga 37509039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 290 - 339
Target Start/End: Complemental strand, 42170402 - 42170353
Alignment:
Q  290 agatacatcaacttttgttgacctaaaagtctcttataaataggagcaga 339  Q
    ||||||||||||||||||||||| |||| |||||||||||||||| ||||    
T  42170402 agatacatcaacttttgttgacccaaaattctcttataaataggaccaga 42170353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 289 - 332
Target Start/End: Complemental strand, 44785453 - 44785410
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaatag 332  Q
    |||||||||||||||||||||||| |||| ||||||||||||||    
T  44785453 tagatacatcaacttttgttgacccaaaattctcttataaatag 44785410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 289 - 343
Target Start/End: Complemental strand, 2787889 - 2787835
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaataggagcagaggga 343  Q
    |||||||||||||||||| ||||| |||| |||||||||||||||| | ||||||    
T  2787889 tagatacatcaacttttgctgacccaaaattctcttataaataggaccggaggga 2787835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 289 - 343
Target Start/End: Original strand, 8437498 - 8437552
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaataggagcagaggga 343  Q
    |||||||||||||||||||||||  |||| |||||||||||||||| | ||||||    
T  8437498 tagatacatcaacttttgttgactcaaaattctcttataaataggaccggaggga 8437552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 289 - 343
Target Start/End: Original strand, 51406746 - 51406800
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaataggagcagaggga 343  Q
    |||||||||||| ||||||||||| |||| |||||||||||||||| | ||||||    
T  51406746 tagatacatcaatttttgttgacccaaaattctcttataaataggaccggaggga 51406800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 290 - 343
Target Start/End: Original strand, 2131746 - 2131799
Alignment:
Q  290 agatacatcaacttttgttgacctaaaagtctcttataaataggagcagaggga 343  Q
    ||||||||||||||||||||||| ||| |||||| |||| ||||| | ||||||    
T  2131746 agatacatcaacttttgttgacccaaatgtctctcataagtaggaccggaggga 2131799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 290 - 343
Target Start/End: Complemental strand, 9213572 - 9213519
Alignment:
Q  290 agatacatcaacttttgttgacctaaaagtctcttataaataggagcagaggga 343  Q
    ||||||||||||||||||||||  ||| |||| |||||||||||| | ||||||    
T  9213572 agatacatcaacttttgttgactaaaatgtcttttataaataggaccggaggga 9213519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 289 - 334
Target Start/End: Complemental strand, 33942989 - 33942944
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaatagga 334  Q
    |||||||||||||||||||||||| ||   ||||||||||||||||    
T  33942989 tagatacatcaacttttgttgacccaagtttctcttataaatagga 33942944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 290 - 334
Target Start/End: Original strand, 1262277 - 1262321
Alignment:
Q  290 agatacatcaacttttgttgacctaaaagtctcttataaatagga 334  Q
    |||||||| ||||||||||||| |||| ||||||| |||||||||    
T  1262277 agatacattaacttttgttgacgtaaatgtctcttctaaatagga 1262321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 290 - 334
Target Start/End: Complemental strand, 34988131 - 34988087
Alignment:
Q  290 agatacatcaacttttgttgacctaaaagtctcttataaatagga 334  Q
    ||||| ||||||||||||||||| ||| |||||| ||||||||||    
T  34988131 agatagatcaacttttgttgacccaaatgtctctaataaatagga 34988087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 289 - 343
Target Start/End: Complemental strand, 38063970 - 38063916
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaataggagcagaggga 343  Q
    |||||||||||||||||||||||| |||| |||||||||||||||| ||||||||    
T  38063970 tagatacatcaacttttgttgacccaaaattctcttataaataggaccagaggga 38063916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 288 - 343
Target Start/End: Original strand, 22285771 - 22285826
Alignment:
Q  288 atagatacatcaacttttgttgacctaaaagtctcttataaataggagcagaggga 343  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||| | ||||||    
T  22285771 atagatacatcaacttttgttgacccaaaattctcttataaataggaccggaggga 22285826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 288 - 339
Target Start/End: Complemental strand, 36016254 - 36016203
Alignment:
Q  288 atagatacatcaacttttgttgacctaaaagtctcttataaataggagcaga 339  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||| ||||    
T  36016254 atagatacatcaacttttgttgacccaaaattctcttataaataggaccaga 36016203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 289 - 343
Target Start/End: Complemental strand, 94375 - 94321
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaataggagcagaggga 343  Q
    |||||||||||||||||||||||| |||| |||||||||||||||| | ||||||    
T  94375 tagatacatcaacttttgttgacccaaaattctcttataaataggatcggaggga 94321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 289 - 343
Target Start/End: Complemental strand, 1738504 - 1738450
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaataggagcagaggga 343  Q
    |||||||||||||||||||||||| |||| |||||||||||||||| | ||||||    
T  1738504 tagatacatcaacttttgttgacccaaaattctcttataaataggaccggaggga 1738450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 289 - 343
Target Start/End: Original strand, 7240822 - 7240876
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaataggagcagaggga 343  Q
    |||||||||||||||||||||||| |||| |||||||||||||||| | ||||||    
T  7240822 tagatacatcaacttttgttgacccaaaattctcttataaataggaccggaggga 7240876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 289 - 343
Target Start/End: Original strand, 7482298 - 7482352
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaataggagcagaggga 343  Q
    |||||||||||||||||||||||| |||| |||||||||||||||| | ||||||    
T  7482298 tagatacatcaacttttgttgacccaaaattctcttataaataggaccggaggga 7482352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 289 - 343
Target Start/End: Original strand, 7661149 - 7661203
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaataggagcagaggga 343  Q
    |||||||||||||||||||||||| ||| ||||| ||||||||||| ||||||||    
T  7661149 tagatacatcaacttttgttgacccaaatgtctcatataaataggaccagaggga 7661203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 289 - 343
Target Start/End: Original strand, 9268829 - 9268883
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaataggagcagaggga 343  Q
    |||||||||||||||||||||||| |||| |||||||||||||||| | ||||||    
T  9268829 tagatacatcaacttttgttgacccaaaattctcttataaataggaccggaggga 9268883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 288 - 334
Target Start/End: Original strand, 33418448 - 33418494
Alignment:
Q  288 atagatacatcaacttttgttgacctaaaagtctcttataaatagga 334  Q
    ||||||||||||||||||||||||| |||| ||||||||||||||||    
T  33418448 atagatacatcaacttttgttgacccaaaattctcttataaatagga 33418494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 289 - 343
Target Start/End: Original strand, 36583468 - 36583522
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaataggagcagaggga 343  Q
    |||||||||||||||||||||||| |||| |||||||||||||||| | ||||||    
T  36583468 tagatacatcaacttttgttgacccaaaattctcttataaataggatcggaggga 36583522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 289 - 343
Target Start/End: Original strand, 46840933 - 46840987
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaataggagcagaggga 343  Q
    |||||||||||||||||||||||| |||| |||||||||||||||| | ||||||    
T  46840933 tagatacatcaacttttgttgacccaaaattctcttataaataggaccggaggga 46840987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 289 - 334
Target Start/End: Original strand, 38441533 - 38441578
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaatagga 334  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||    
T  38441533 tagatacatcaacttttgttgacccaaaattctcttataaatagga 38441578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 289 - 332
Target Start/End: Complemental strand, 1565786 - 1565743
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaatag 332  Q
    |||||||||||||||||||||||| |||| ||||||||||||||    
T  1565786 tagatacatcaacttttgttgacccaaaattctcttataaatag 1565743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 289 - 332
Target Start/End: Complemental strand, 31319456 - 31319413
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaatag 332  Q
    |||||||||||||||||||||||| |||| ||||||||||||||    
T  31319456 tagatacatcaacttttgttgacccaaaattctcttataaatag 31319413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 289 - 343
Target Start/End: Complemental strand, 23314196 - 23314142
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaataggagcagaggga 343  Q
    |||||| ||||||||||||||||| |||| |||||||||||||||| | ||||||    
T  23314196 tagatatatcaacttttgttgacccaaaattctcttataaataggaccggaggga 23314142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 289 - 334
Target Start/End: Original strand, 4790321 - 4790366
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaatagga 334  Q
    ||||||||||||||||| |||||| |||| ||||||||||||||||    
T  4790321 tagatacatcaacttttattgacccaaaattctcttataaatagga 4790366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 290 - 332
Target Start/End: Original strand, 9636129 - 9636171
Alignment:
Q  290 agatacatcaacttttgttgacctaaaagtctcttataaatag 332  Q
    |||||||| |||||||||||| |||||||||| ||||||||||    
T  9636129 agatacataaacttttgttgatctaaaagtcttttataaatag 9636171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 289 - 343
Target Start/End: Complemental strand, 28536808 - 28536754
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaataggagcagaggga 343  Q
    ||||||||||||||||| |||| | |||| |||||||||||||||| | ||||||    
T  28536808 tagatacatcaacttttattgatccaaaattctcttataaataggaccggaggga 28536754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 300 - 341
Target Start/End: Complemental strand, 9268802 - 9268761
Alignment:
Q  300 acttttgttgacctaaaagtctcttataaataggagcagagg 341  Q
    |||||||||||||||||  |||||||||||||||| ||||||    
T  9268802 acttttgttgacctaaatttctcttataaataggaccagagg 9268761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 290 - 331
Target Start/End: Complemental strand, 36033282 - 36033241
Alignment:
Q  290 agatacatcaacttttgttgacctaaaagtctcttataaata 331  Q
    |||||||||||||||||||||||||||  | |||||||||||    
T  36033282 agatacatcaacttttgttgacctaaatttatcttataaata 36033241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 291 - 331
Target Start/End: Complemental strand, 28469536 - 28469496
Alignment:
Q  291 gatacatcaacttttgttgacctaaaagtctcttataaata 331  Q
    ||||||| |||||||||||||||||| |||| |||||||||    
T  28469536 gatacattaacttttgttgacctaaatgtcttttataaata 28469496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 24)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 289 - 343
Target Start/End: Original strand, 42797805 - 42797859
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaataggagcagaggga 343  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| | ||||||    
T  42797805 tagatacatcaacttttgttgacctaaaattctcttataaataggaccggaggga 42797859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 288 - 343
Target Start/End: Complemental strand, 41469824 - 41469769
Alignment:
Q  288 atagatacatcaacttttgttgacctaaaagtctcttataaataggagcagaggga 343  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||| | ||||||    
T  41469824 atagatacatcaacttttgttgaccaaaaattctcttataaataggaccggaggga 41469769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 289 - 343
Target Start/End: Original strand, 3422133 - 3422187
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaataggagcagaggga 343  Q
    |||||||||||||||||||||||| |||| |||||||||||||||| | ||||||    
T  3422133 tagatacatcaacttttgttgacccaaaattctcttataaataggaccggaggga 3422187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 289 - 343
Target Start/End: Complemental strand, 6121950 - 6121896
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaataggagcagaggga 343  Q
    |||||||||||||||||||||||| |||| |||||||||||||||| | ||||||    
T  6121950 tagatacatcaacttttgttgacccaaaattctcttataaataggaccggaggga 6121896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 289 - 343
Target Start/End: Original strand, 47833684 - 47833738
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaataggagcagaggga 343  Q
    |||||||||||||||||||||||| |||| |||||||||||||||| | ||||||    
T  47833684 tagatacatcaacttttgttgacccaaaattctcttataaataggaccggaggga 47833738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 289 - 343
Target Start/End: Complemental strand, 47838674 - 47838620
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaataggagcagaggga 343  Q
    |||||||||||||||||||||||| |||| |||||||||||||||| | ||||||    
T  47838674 tagatacatcaacttttgttgaccaaaaattctcttataaataggaccggaggga 47838620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 290 - 343
Target Start/End: Complemental strand, 51894638 - 51894585
Alignment:
Q  290 agatacatcaacttttgttgacctaaaagtctcttataaataggagcagaggga 343  Q
    ||||||||||||||||||||||| |||| |||||||||||||||| | ||||||    
T  51894638 agatacatcaacttttgttgacccaaaattctcttataaataggaccggaggga 51894585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 289 - 332
Target Start/End: Original strand, 7579383 - 7579426
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaatag 332  Q
    |||||||||||||||||||||||| |||| ||||||||||||||    
T  7579383 tagatacatcaacttttgttgacccaaaattctcttataaatag 7579426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 289 - 343
Target Start/End: Original strand, 3372194 - 3372248
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaataggagcagaggga 343  Q
    |||||||||||||||||||||||| |||| | |||||||||||||| | ||||||    
T  3372194 tagatacatcaacttttgttgacccaaaattatcttataaataggaccggaggga 3372248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 289 - 331
Target Start/End: Original strand, 3993049 - 3993091
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaata 331  Q
    |||||||||||||||||||||||| |||| |||||||||||||    
T  3993049 tagatacatcaacttttgttgacccaaaattctcttataaata 3993091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 292 - 334
Target Start/End: Original strand, 5986952 - 5986994
Alignment:
Q  292 atacatcaacttttgttgacctaaaagtctcttataaatagga 334  Q
    ||||||||||||||||||||| |||| ||||||||||||||||    
T  5986952 atacatcaacttttgttgacccaaaattctcttataaatagga 5986994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 289 - 343
Target Start/End: Complemental strand, 20538743 - 20538689
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaataggagcagaggga 343  Q
    |||||||||||| ||||||||||| |||| |||||||||||||||| | ||||||    
T  20538743 tagatacatcaaattttgttgacccaaaattctcttataaataggaccggaggga 20538689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 289 - 343
Target Start/End: Original strand, 24704443 - 24704497
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaataggagcagaggga 343  Q
    ||||||||| |||||||||||||| |||| |||||||||||||||| | ||||||    
T  24704443 tagatacattaacttttgttgacccaaaattctcttataaataggatcggaggga 24704497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 289 - 343
Target Start/End: Original strand, 33621869 - 33621923
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaataggagcagaggga 343  Q
    |||||||||||||||||||||||| |||| | |||||||||||||| | ||||||    
T  33621869 tagatacatcaacttttgttgacccaaaattatcttataaataggaccggaggga 33621923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 289 - 343
Target Start/End: Original strand, 46797798 - 46797852
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaataggagcagaggga 343  Q
    |||||| ||||||||||||||||| |||| |||||||||||||||| | ||||||    
T  46797798 tagatatatcaacttttgttgacccaaaattctcttataaataggaccggaggga 46797852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 289 - 343
Target Start/End: Original strand, 48336336 - 48336390
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaataggagcagaggga 343  Q
    |||||||||||||||||||||||| |||| | |||||||||||||| | ||||||    
T  48336336 tagatacatcaacttttgttgacccaaaattttcttataaataggaccggaggga 48336390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 289 - 343
Target Start/End: Original strand, 53337443 - 53337497
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaataggagcagaggga 343  Q
    ||||||||||||||||| |||||| |||| |||||||||||||||| | ||||||    
T  53337443 tagatacatcaacttttattgacccaaaattctcttataaataggaccggaggga 53337497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 289 - 334
Target Start/End: Original strand, 43900622 - 43900667
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaatagga 334  Q
    |||||||||||||||||||| ||| |||| ||||||||||||||||    
T  43900622 tagatacatcaacttttgttaacccaaaattctcttataaatagga 43900667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 289 - 334
Target Start/End: Original strand, 52756748 - 52756793
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaatagga 334  Q
    |||||||||||||||||||||||| |||| ||| ||||||||||||    
T  52756748 tagatacatcaacttttgttgacccaaaattcttttataaatagga 52756793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 292 - 343
Target Start/End: Complemental strand, 3904737 - 3904686
Alignment:
Q  292 atacatcaacttttgttgacctaaaagtctcttataaataggagcagaggga 343  Q
    ||||||||| ||||||||||| |||| |||||||||||||||| | ||||||    
T  3904737 atacatcaatttttgttgacccaaaattctcttataaataggaccggaggga 3904686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 290 - 340
Target Start/End: Original strand, 1716373 - 1716423
Alignment:
Q  290 agatacatcaacttttgttgacctaaaagtctcttataaataggagcagag 340  Q
    |||| |||||||||| |||||||||||  |||||||||||||||| |||||    
T  1716373 agatgcatcaactttggttgacctaaacttctcttataaataggatcagag 1716423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 290 - 332
Target Start/End: Complemental strand, 13601117 - 13601075
Alignment:
Q  290 agatacatcaacttttgttgacctaaaagtctcttataaatag 332  Q
    |||||||| |||||||||||| |||||||||| ||||||||||    
T  13601117 agatacataaacttttgttgatctaaaagtcttttataaatag 13601075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 290 - 343
Target Start/End: Original strand, 4780369 - 4780422
Alignment:
Q  290 agatacatcaacttttgttgacctaaaagtctcttataaataggagcagaggga 343  Q
    |||||||| |||||||||||||| |||  |||||||||||||||| | ||||||    
T  4780369 agatacattaacttttgttgaccaaaatttctcttataaataggaccggaggga 4780422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 290 - 331
Target Start/End: Complemental strand, 38160428 - 38160387
Alignment:
Q  290 agatacatcaacttttgttgacctaaaagtctcttataaata 331  Q
    ||||||||||| |||||||||||||||  |||||||||||||    
T  38160428 agatacatcaatttttgttgacctaaatctctcttataaata 38160387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 289 - 334
Target Start/End: Complemental strand, 44955263 - 44955218
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaatagga 334  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||    
T  44955263 tagatacatcaacttttgttgacctaaaattctcttataaatagga 44955218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 289 - 345
Target Start/End: Original strand, 9981720 - 9981776
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaataggagcagagggaat 345  Q
    |||||||||||||||||||||||| |||| |||||||||||||||| | ||||||||    
T  9981720 tagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggaat 9981776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 289 - 343
Target Start/End: Original strand, 11796006 - 11796060
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaataggagcagaggga 343  Q
    |||||||||||||||||||||||| |||| |||||||||||||||| | ||||||    
T  11796006 tagatacatcaacttttgttgacccaaaattctcttataaataggaccggaggga 11796060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 289 - 343
Target Start/End: Original strand, 14984910 - 14984964
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaataggagcagaggga 343  Q
    |||||||||||||||||||||||| |||| |||||||||||||||| | ||||||    
T  14984910 tagatacatcaacttttgttgacccaaaattctcttataaataggaccggaggga 14984964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 289 - 343
Target Start/End: Original strand, 25694392 - 25694446
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaataggagcagaggga 343  Q
    |||||||||||||||||||||||| |||| |||||||||||||||| | ||||||    
T  25694392 tagatacatcaacttttgttgacccaaaattctcttataaataggaccggaggga 25694446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 289 - 343
Target Start/End: Complemental strand, 27159415 - 27159361
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaataggagcagaggga 343  Q
    |||||||||||||||||||||||| |||| |||||||||||||||| | ||||||    
T  27159415 tagatacatcaacttttgttgacccaaaattctcttataaataggaccggaggga 27159361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 289 - 343
Target Start/End: Complemental strand, 31842852 - 31842798
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaataggagcagaggga 343  Q
    |||||||||||||||||||||||| |||| |||||||||||||||| | ||||||    
T  31842852 tagatacatcaacttttgttgacccaaaattctcttataaataggaccggaggga 31842798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 289 - 343
Target Start/End: Complemental strand, 39402023 - 39401969
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaataggagcagaggga 343  Q
    |||||||||||||||||||||||| |||| |||||||||||||||| | ||||||    
T  39402023 tagatacatcaacttttgttgacccaaaattctcttataaataggaccggaggga 39401969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 289 - 343
Target Start/End: Complemental strand, 44668150 - 44668096
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaataggagcagaggga 343  Q
    |||||||||||||||||||||||| |||| |||||||||||||||| | ||||||    
T  44668150 tagatacatcaacttttgttgacccaaaattctcttataaataggaccggaggga 44668096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 289 - 343
Target Start/End: Complemental strand, 47777538 - 47777484
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaataggagcagaggga 343  Q
    |||||||||||||||||||||||| |||| |||||||||||||||| | ||||||    
T  47777538 tagatacatcaacttttgttgacccaaaattctcttataaataggaccggaggga 47777484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 292 - 343
Target Start/End: Complemental strand, 12483682 - 12483631
Alignment:
Q  292 atacatcaacttttgttgacctaaaagtctcttataaataggagcagaggga 343  Q
    ||||||||||||||||||||| |||| |||||||||||||||| | ||||||    
T  12483682 atacatcaacttttgttgacccaaaattctcttataaataggaccggaggga 12483631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 289 - 332
Target Start/End: Original strand, 34042769 - 34042812
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaatag 332  Q
    |||||||||||||||||||||||| |||| ||||||||||||||    
T  34042769 tagatacatcaacttttgttgacccaaaattctcttataaatag 34042812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 289 - 332
Target Start/End: Complemental strand, 47216756 - 47216713
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaatag 332  Q
    |||||||||||||||||||||||| |||| ||||||||||||||    
T  47216756 tagatacatcaacttttgttgacccaaaattctcttataaatag 47216713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 289 - 343
Target Start/End: Original strand, 1050961 - 1051015
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaataggagcagaggga 343  Q
    |||||||||||||||| ||||||| |||| |||||||||||||||| | ||||||    
T  1050961 tagatacatcaactttagttgacccaaaattctcttataaataggaccggaggga 1051015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 289 - 343
Target Start/End: Complemental strand, 26471122 - 26471068
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaataggagcagaggga 343  Q
    |||||||||||||||||||||| | |||| |||||||||||||||| | ||||||    
T  26471122 tagatacatcaacttttgttgatccaaaattctcttataaataggaccggaggga 26471068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 289 - 331
Target Start/End: Complemental strand, 47588394 - 47588352
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaata 331  Q
    |||||||||||||||||||||||| |||| |||||||||||||    
T  47588394 tagatacatcaacttttgttgacccaaaattctcttataaata 47588352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 290 - 343
Target Start/End: Complemental strand, 11897110 - 11897057
Alignment:
Q  290 agatacatcaacttttgttgacctaaaagtctcttataaataggagcagaggga 343  Q
    ||||||||||||||||||||||||||   |||||||||||||||| | ||||||    
T  11897110 agatacatcaacttttgttgacctaactttctcttataaataggaccggaggga 11897057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 291 - 343
Target Start/End: Original strand, 11897129 - 11897181
Alignment:
Q  291 gatacatcaacttttgttgacctaaaagtctcttataaataggagcagaggga 343  Q
    |||||||||||||||||||||| |||  |||||||||||||||| | ||||||    
T  11897129 gatacatcaacttttgttgacccaaatttctcttataaataggaccggaggga 11897181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 289 - 343
Target Start/End: Original strand, 17556826 - 17556880
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaataggagcagaggga 343  Q
    |||||||||||||||||||||||| ||   |||||||||||||||| | ||||||    
T  17556826 tagatacatcaacttttgttgacccaagtttctcttataaataggaccggaggga 17556880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 290 - 343
Target Start/End: Original strand, 16448182 - 16448235
Alignment:
Q  290 agatacatcaacttttgttgacctaaaagtctcttataaataggagcagaggga 343  Q
    ||||||||||||||||||||||| ||   |||||||||||||||| | ||||||    
T  16448182 agatacatcaacttttgttgacccaactttctcttataaataggaccggaggga 16448235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 289 - 326
Target Start/End: Complemental strand, 23278058 - 23278021
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttat 326  Q
    |||||||||||||||||||||||| |||| ||||||||    
T  23278058 tagatacatcaacttttgttgacccaaaattctcttat 23278021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 299 - 343
Target Start/End: Complemental strand, 17556799 - 17556755
Alignment:
Q  299 aacttttgttgacctaaaagtctcttataaataggagcagaggga 343  Q
    |||||||||||||||||   |||||||||||||||| ||||||||    
T  17556799 aacttttgttgacctaactttctcttataaataggaccagaggga 17556755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 20)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 289 - 343
Target Start/End: Complemental strand, 54669 - 54615
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaataggagcagaggga 343  Q
    |||||||||||||||||||||||| |||| |||||||||||||||| | ||||||    
T  54669 tagatacatcaacttttgttgacccaaaattctcttataaataggaccggaggga 54615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 289 - 343
Target Start/End: Complemental strand, 2890219 - 2890165
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaataggagcagaggga 343  Q
    |||||||||||||||||||||||| |||| |||||||||||||||| | ||||||    
T  2890219 tagatacatcaacttttgttgacccaaaattctcttataaataggaccggaggga 2890165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 289 - 343
Target Start/End: Original strand, 6552728 - 6552782
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaataggagcagaggga 343  Q
    |||||||||||||||||||||||| |||| |||||||||||||||| | ||||||    
T  6552728 tagatacatcaacttttgttgacccaaaattctcttataaataggaccggaggga 6552782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 289 - 343
Target Start/End: Complemental strand, 7785835 - 7785781
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaataggagcagaggga 343  Q
    |||||||||||||||||||||||| |||| |||||||||||||||| | ||||||    
T  7785835 tagatacatcaacttttgttgacccaaaattctcttataaataggaccggaggga 7785781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 289 - 343
Target Start/End: Complemental strand, 33289318 - 33289264
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaataggagcagaggga 343  Q
    |||||||||||||||||||||||| |||| |||||||||||||||| | ||||||    
T  33289318 tagatacatcaacttttgttgacccaaaattctcttataaataggaccggaggga 33289264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 289 - 343
Target Start/End: Complemental strand, 39571260 - 39571206
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaataggagcagaggga 343  Q
    |||||||||||||||||||||||| |||| |||||||||||||||| | ||||||    
T  39571260 tagatacatcaacttttgttgacccaaaattctcttataaataggaccggaggga 39571206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 289 - 343
Target Start/End: Complemental strand, 43199411 - 43199357
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaataggagcagaggga 343  Q
    |||||||||||||||||||||||| |||| |||||||||||||||| | ||||||    
T  43199411 tagatacatcaacttttgttgaccaaaaattctcttataaataggaccggaggga 43199357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 289 - 334
Target Start/End: Complemental strand, 12343197 - 12343152
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaatagga 334  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||    
T  12343197 tagatacatcaacttttgttgaccaaaaattctcttataaatagga 12343152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 289 - 332
Target Start/End: Complemental strand, 15888409 - 15888366
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaatag 332  Q
    |||||||||||||||||||||||| |||| ||||||||||||||    
T  15888409 tagatacatcaacttttgttgacccaaaattctcttataaatag 15888366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 289 - 343
Target Start/End: Complemental strand, 3304335 - 3304281
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaataggagcagaggga 343  Q
    |||||||||||||||||||||||| |||| | |||||||||||||| | ||||||    
T  3304335 tagatacatcaacttttgttgacccaaaattttcttataaataggaccggaggga 3304281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 289 - 343
Target Start/End: Complemental strand, 7805756 - 7805702
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaataggagcagaggga 343  Q
    |||||||||||||||||| ||||| |||| |||||||||||||||| | ||||||    
T  7805756 tagatacatcaacttttgctgacccaaaattctcttataaataggaccggaggga 7805702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 289 - 343
Target Start/End: Complemental strand, 12763711 - 12763657
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaataggagcagaggga 343  Q
    |||||||||||||||||||||||| |||| | |||||||||||||| | ||||||    
T  12763711 tagatacatcaacttttgttgacccaaaattatcttataaataggaccggaggga 12763657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 289 - 331
Target Start/End: Original strand, 13578930 - 13578972
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaata 331  Q
    |||||||||||||||||||||||| |||| |||||||||||||    
T  13578930 tagatacatcaacttttgttgacccaaaattctcttataaata 13578972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 289 - 343
Target Start/End: Complemental strand, 25601057 - 25601003
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaataggagcagaggga 343  Q
    ||||||||| |||||||||||||| |||| |||||||||||||||| | ||||||    
T  25601057 tagatacattaacttttgttgacccaaaattctcttataaataggaccggaggga 25601003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 289 - 343
Target Start/End: Complemental strand, 32211420 - 32211366
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaataggagcagaggga 343  Q
    |||||||||||| ||||||||||| |||| |||||||||||||||| | ||||||    
T  32211420 tagatacatcaatttttgttgacccaaaattctcttataaataggaccggaggga 32211366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 289 - 343
Target Start/End: Complemental strand, 44498244 - 44498190
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaataggagcagaggga 343  Q
    ||||||||||||||||| |||||| |||| |||||||||||||||| | ||||||    
T  44498244 tagatacatcaacttttattgacccaaaattctcttataaataggaccggaggga 44498190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 289 - 334
Target Start/End: Original strand, 7012244 - 7012289
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaatagga 334  Q
    |||||||||||||||||||||| | |||| ||||||||||||||||    
T  7012244 tagatacatcaacttttgttgatccaaaattctcttataaatagga 7012289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 289 - 334
Target Start/End: Original strand, 31654686 - 31654731
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaatagga 334  Q
    |||||||||||||||||||||||| |||| ||| ||||||||||||    
T  31654686 tagatacatcaacttttgttgacccaaaattcttttataaatagga 31654731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 289 - 343
Target Start/End: Complemental strand, 32114532 - 32114478
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaataggagcagaggga 343  Q
    |||||||||||| ||||||||||| |||| | |||||||||||||| | ||||||    
T  32114532 tagatacatcaatttttgttgacccaaaattttcttataaataggaccggaggga 32114478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 290 - 334
Target Start/End: Original strand, 24692052 - 24692096
Alignment:
Q  290 agatacatcaacttttgttgacctaaaagtctcttataaatagga 334  Q
    ||||||||||||||||||||||||||   | ||||||||||||||    
T  24692052 agatacatcaacttttgttgacctaactttttcttataaatagga 24692096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 289 - 343
Target Start/End: Original strand, 2830408 - 2830462
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaataggagcagaggga 343  Q
    |||||||||||||||||||||||| |||| |||||||||||||||| | ||||||    
T  2830408 tagatacatcaacttttgttgacccaaaattctcttataaataggaccggaggga 2830462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 289 - 343
Target Start/End: Original strand, 6330188 - 6330242
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaataggagcagaggga 343  Q
    |||||||||||||||||||||||| |||| |||||||||||||||| | ||||||    
T  6330188 tagatacatcaacttttgttgacccaaaattctcttataaataggaccggaggga 6330242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 289 - 343
Target Start/End: Original strand, 8099603 - 8099657
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaataggagcagaggga 343  Q
    |||||||||||||||||||||||| |||| |||||||||||||||| | ||||||    
T  8099603 tagatacatcaacttttgttgacccaaaattctcttataaataggaccggaggga 8099657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 289 - 343
Target Start/End: Complemental strand, 8383026 - 8382972
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaataggagcagaggga 343  Q
    |||||||||||||||||||||||| |||| |||||||||||||||| | ||||||    
T  8383026 tagatacatcaacttttgttgacccaaaattctcttataaataggaccggaggga 8382972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 289 - 343
Target Start/End: Original strand, 9644769 - 9644823
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaataggagcagaggga 343  Q
    |||||||||||||||||||||||| |||| |||||||||||||||| | ||||||    
T  9644769 tagatacatcaacttttgttgacccaaaattctcttataaataggaccggaggga 9644823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 289 - 343
Target Start/End: Original strand, 9650786 - 9650840
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaataggagcagaggga 343  Q
    |||||||||||||||||||||||| |||| |||||||||||||||| | ||||||    
T  9650786 tagatacatcaacttttgttgacccaaaattctcttataaataggaccggaggga 9650840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 289 - 343
Target Start/End: Complemental strand, 11572202 - 11572148
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaataggagcagaggga 343  Q
    |||||||||||||||||||||||| |||| |||||||||||||||| | ||||||    
T  11572202 tagatacatcaacttttgttgacccaaaattctcttataaataggaccggaggga 11572148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 289 - 343
Target Start/End: Complemental strand, 13853650 - 13853596
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaataggagcagaggga 343  Q
    |||||||||||||||||||||||| |||| |||||||||||||||| | ||||||    
T  13853650 tagatacatcaacttttgttgacccaaaattctcttataaataggaccggaggga 13853596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 289 - 343
Target Start/End: Original strand, 26602396 - 26602450
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaataggagcagaggga 343  Q
    |||||||||||||||||||||||| |||| |||||||||||||||| | ||||||    
T  26602396 tagatacatcaacttttgttgacccaaaattctcttataaataggaccggaggga 26602450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 289 - 334
Target Start/End: Complemental strand, 8417850 - 8417805
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaatagga 334  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||    
T  8417850 tagatacatcaacttttgttgacccaaaattctcttataaatagga 8417805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 289 - 334
Target Start/End: Complemental strand, 28747191 - 28747146
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaatagga 334  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||    
T  28747191 tagatacatcaacttttgttgacccaaaattctcttataaatagga 28747146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 289 - 343
Target Start/End: Original strand, 6068639 - 6068693
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaataggagcagaggga 343  Q
    |||||||||||||||||||||||  |||| |||||||||||||||| | ||||||    
T  6068639 tagatacatcaacttttgttgactcaaaattctcttataaataggaccggaggga 6068693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 289 - 334
Target Start/End: Original strand, 22896535 - 22896580
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaatagga 334  Q
    |||||||||||||||||||||||  |||| ||||||||||||||||    
T  22896535 tagatacatcaacttttgttgacaaaaaattctcttataaatagga 22896580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 289 - 334
Target Start/End: Complemental strand, 33052851 - 33052806
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaatagga 334  Q
    ||||||||||||||||| |||||| |||| ||||||||||||||||    
T  33052851 tagatacatcaacttttattgacccaaaattctcttataaatagga 33052806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 289 - 334
Target Start/End: Complemental strand, 35031058 - 35031013
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaatagga 334  Q
    |||||||||||| ||||||||||| |||| ||||||||||||||||    
T  35031058 tagatacatcaatttttgttgacccaaaattctcttataaatagga 35031013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 289 - 332
Target Start/End: Original strand, 6143627 - 6143670
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaatag 332  Q
    ||||||||||||||||||||| || |||| ||||||||||||||    
T  6143627 tagatacatcaacttttgttgtcccaaaattctcttataaatag 6143670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 292 - 343
Target Start/End: Original strand, 14936533 - 14936584
Alignment:
Q  292 atacatcaacttttgttgacctaaaagtctcttataaataggagcagaggga 343  Q
    ||||||||||| ||||||||| |||  |||||||||||||||| ||||||||    
T  14936533 atacatcaactattgttgacccaaatatctcttataaataggaccagaggga 14936584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 289 - 343
Target Start/End: Complemental strand, 14936514 - 14936460
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaataggagcagaggga 343  Q
    ||||||||||| |||||||||||||||| || |||| || |||||| ||||||||    
T  14936514 tagatacatcaccttttgttgacctaaatgtttcttctatataggaccagaggga 14936460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 289 - 334
Target Start/End: Original strand, 17992061 - 17992106
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaatagga 334  Q
    |||||||||| | ||||||||||| |||| ||||||||||||||||    
T  17992061 tagatacatcgatttttgttgacccaaaattctcttataaatagga 17992106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 289 - 343
Target Start/End: Original strand, 3055631 - 3055685
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaataggagcagaggga 343  Q
    |||||||||||||||||||||||| |||| |||||||||||||||| | ||||||    
T  3055631 tagatacatcaacttttgttgacccaaaattctcttataaataggaccggaggga 3055685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 289 - 343
Target Start/End: Complemental strand, 6648576 - 6648522
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaataggagcagaggga 343  Q
    |||||||||||||||||||||||| |||| |||||||||||||||| | ||||||    
T  6648576 tagatacatcaacttttgttgacccaaaattctcttataaataggaccggaggga 6648522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 289 - 343
Target Start/End: Complemental strand, 9047812 - 9047758
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaataggagcagaggga 343  Q
    |||||||||||||||||||||||| |||| |||||||||||||||| | ||||||    
T  9047812 tagatacatcaacttttgttgacccaaaattctcttataaataggaccggaggga 9047758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 289 - 343
Target Start/End: Complemental strand, 12337994 - 12337940
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaataggagcagaggga 343  Q
    |||||||||||||||||||||||| |||| |||||||||||||||| | ||||||    
T  12337994 tagatacatcaacttttgttgacccaaaattctcttataaataggaccggaggga 12337940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 289 - 343
Target Start/End: Complemental strand, 13197767 - 13197713
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaataggagcagaggga 343  Q
    |||||||||||||||||||||||| |||| |||||||||||||||| | ||||||    
T  13197767 tagatacatcaacttttgttgacccaaaattctcttataaataggaccggaggga 13197713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 289 - 343
Target Start/End: Original strand, 15896915 - 15896969
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaataggagcagaggga 343  Q
    |||||||||||||||||||||||| |||| |||||||||||||||| | ||||||    
T  15896915 tagatacatcaacttttgttgacccaaaattctcttataaataggaccggaggga 15896969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 289 - 343
Target Start/End: Complemental strand, 37990070 - 37990016
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaataggagcagaggga 343  Q
    |||||||||||||||||||||||| |||| |||||||||||||||| | ||||||    
T  37990070 tagatacatcaacttttgttgacccaaaattctcttataaataggaccggaggga 37990016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 289 - 343
Target Start/End: Complemental strand, 38917579 - 38917525
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaataggagcagaggga 343  Q
    |||||||||||||||||||||||| |||| |||||||||||||||| | ||||||    
T  38917579 tagatacatcaacttttgttgacccaaaattctcttataaataggaccggaggga 38917525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 289 - 343
Target Start/End: Complemental strand, 41478696 - 41478642
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaataggagcagaggga 343  Q
    |||||||||||||||||||||||| |||| |||||||||||||||| | ||||||    
T  41478696 tagatacatcaacttttgttgacccaaaattctcttataaataggaccggaggga 41478642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 289 - 343
Target Start/End: Original strand, 44398759 - 44398813
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaataggagcagaggga 343  Q
    |||||||||||||||||||||||| |||| |||||||||||||||| | ||||||    
T  44398759 tagatacatcaacttttgttgacccaaaattctcttataaataggaccggaggga 44398813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 290 - 343
Target Start/End: Original strand, 15372300 - 15372353
Alignment:
Q  290 agatacatcaacttttgttgacctaaaagtctcttataaataggagcagaggga 343  Q
    ||||||||||||||||||||||| |||| |||||||||||||||| | ||||||    
T  15372300 agatacatcaacttttgttgacccaaaattctcttataaataggaccggaggga 15372353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 289 - 334
Target Start/End: Complemental strand, 16243840 - 16243795
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaatagga 334  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||    
T  16243840 tagatacatcaacttttgttgacccaaaattctcttataaatagga 16243795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 289 - 334
Target Start/End: Original strand, 44397620 - 44397665
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaatagga 334  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||    
T  44397620 tagatacatcaacttttgttgacccaaaattctcttataaatagga 44397665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 289 - 345
Target Start/End: Complemental strand, 44804635 - 44804579
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaataggagcagagggaat 345  Q
    |||||||||||||||||||| || ||||| |||||||||||||||| | ||||||||    
T  44804635 tagatacatcaacttttgttaacttaaaattctcttataaataggaccggagggaat 44804579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 289 - 343
Target Start/End: Original strand, 13344557 - 13344611
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaataggagcagaggga 343  Q
    |||||||||||||||||||||| | |||| |||||||||||||||| | ||||||    
T  13344557 tagatacatcaacttttgttgatccaaaattctcttataaataggaccggaggga 13344611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 289 - 343
Target Start/End: Complemental strand, 16044374 - 16044320
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaataggagcagaggga 343  Q
    |||||||||||||||| ||||||| |||| |||||||||||||||| | ||||||    
T  16044374 tagatacatcaactttagttgacccaaaattctcttataaataggaccggaggga 16044320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 292 - 334
Target Start/End: Original strand, 23227348 - 23227390
Alignment:
Q  292 atacatcaacttttgttgacctaaaagtctcttataaatagga 334  Q
    ||||||||||||||||||||| ||| |||||||||||||||||    
T  23227348 atacatcaacttttgttgaccaaaatgtctcttataaatagga 23227390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 289 - 343
Target Start/End: Complemental strand, 30099239 - 30099185
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaataggagcagaggga 343  Q
    |||||||||||||||||||||||| |||| ||||| |||||||||| | ||||||    
T  30099239 tagatacatcaacttttgttgacccaaaattctctaataaataggaccggaggga 30099185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 289 - 343
Target Start/End: Complemental strand, 37666667 - 37666613
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaataggagcagaggga 343  Q
    |||||||||||||||| ||||||| |||| |||||||||||||||| | ||||||    
T  37666667 tagatacatcaactttagttgacccaaaattctcttataaataggaccggaggga 37666613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 289 - 343
Target Start/End: Complemental strand, 41492953 - 41492899
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaataggagcagaggga 343  Q
    |||||||||||||||||||||||| |||  |||||||||||||||| | ||||||    
T  41492953 tagatacatcaacttttgttgacccaaatttctcttataaataggaccggaggga 41492899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 292 - 341
Target Start/End: Original strand, 40714018 - 40714067
Alignment:
Q  292 atacatcaacttttgttgacctaaaagtctcttataaataggagcagagg 341  Q
    ||||||||||||||||||||||| |||||||||||||  |||| ||||||    
T  40714018 atacatcaacttttgttgacctacaagtctcttataagaaggaccagagg 40714067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 292 - 343
Target Start/End: Complemental strand, 13724156 - 13724105
Alignment:
Q  292 atacatcaacttttgttgacctaaaagtctcttataaataggagcagaggga 343  Q
    ||||||||||||||||||||||| | ||||||| ||||||||| | ||||||    
T  13724156 atacatcaacttttgttgacctagatgtctcttgtaaataggaccggaggga 13724105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 290 - 332
Target Start/End: Complemental strand, 20900720 - 20900678
Alignment:
Q  290 agatacatcaacttttgttgacctaaaagtctcttataaatag 332  Q
    ||||||||||||||||| ||||| ||| |||||||||||||||    
T  20900720 agatacatcaacttttgctgacccaaatgtctcttataaatag 20900678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 290 - 334
Target Start/End: Original strand, 30985766 - 30985810
Alignment:
Q  290 agatacatcaacttttgttgacctaaaagtctcttataaatagga 334  Q
    ||||| ||||||||||||||||| ||| |||| ||||||||||||    
T  30985766 agataaatcaacttttgttgaccaaaatgtctgttataaatagga 30985810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1707 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold1707
Description:

Target: scaffold1707; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 289 - 334
Target Start/End: Original strand, 1408 - 1453
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaatagga 334  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||    
T  1408 tagatacatcaacttttgttgacccaaaattctcttataaatagga 1453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 292 - 343
Target Start/End: Original strand, 49581 - 49632
Alignment:
Q  292 atacatcaacttttgttgacctaaaagtctcttataaataggagcagaggga 343  Q
    ||||||||||||||||||||| |||| |||||||||||||||| | ||||||    
T  49581 atacatcaacttttgttgacccaaaattctcttataaataggaccggaggga 49632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0482 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0482
Description:

Target: scaffold0482; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 289 - 343
Target Start/End: Original strand, 12933 - 12987
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaataggagcagaggga 343  Q
    |||||||||||||||||| ||||| |||| |||||||||||||||| | ||||||    
T  12933 tagatacatcaacttttgctgacccaaaattctcttataaataggaccggaggga 12987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 289 - 343
Target Start/End: Complemental strand, 6188 - 6134
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaataggagcagaggga 343  Q
    |||||||||||||||||||||||| |||| | |||||||||||||| | ||||||    
T  6188 tagatacatcaacttttgttgacccaaaattttcttataaataggaccggaggga 6134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 289 - 343
Target Start/End: Original strand, 23858 - 23912
Alignment:
Q  289 tagatacatcaacttttgttgacctaaaagtctcttataaataggagcagaggga 343  Q
    |||||||||||||||||||||||| |||| | |||||||||||||| | ||||||    
T  23858 tagatacatcaacttttgttgacccaaaattttcttataaataggaccggaggga 23912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University