View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15952_high_7 (Length: 355)
Name: NF15952_high_7
Description: NF15952
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15952_high_7 |
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Alignment Details
Target: chr8 (Bit Score: 289; Significance: 1e-162; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 289; E-Value: 1e-162
Query Start/End: Original strand, 1 - 339
Target Start/End: Original strand, 41853077 - 41853412
Alignment:
| Q |
1 |
ccgttgctttctgaagtatcctgttatagtgtgactatgactttatatcatactattcacacataatttacactaggacatcatg---ttatttgatgct |
97 |
Q |
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| T |
41853077 |
ccgttgctttctgaagtatcctgttatagc------atgactttatatcatactattcacacataatttacactaggacatcatgatgttatttgttgct |
41853170 |
T |
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| Q |
98 |
cttacgatccaaacataagtgaccttggtataaaaatacttcagttgattttgtttatactcgtggtattccatatattctcaagtacaattaggagaaa |
197 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41853171 |
cttacgatccaaacataagtgaccttggtataaaaatacttcagttgattttgtttatactcgtggtattccatatattctcaagtacaattaggagaaa |
41853270 |
T |
|
| Q |
198 |
aagcctggagtattgaaagggaaatttggatctatttccactggatcaagtgggaaatggaaatcgggaataggtgaatttgttactgatgtgttggtgg |
297 |
Q |
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||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41853271 |
aagcctggagtattgaaagggaaatttggatctatttccacgggatcaagtgggaaatggaaatcgggaataggtgaatttgttactgatgtgttggtgg |
41853370 |
T |
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| Q |
298 |
aaatgatctccgtaatgctggattctgaacgagggttgttat |
339 |
Q |
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|||||||||||||||||| ||||||||||||||||||||||| |
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| T |
41853371 |
aaatgatctccgtaatgccggattctgaacgagggttgttat |
41853412 |
T |
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