View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15952_low_14 (Length: 250)
Name: NF15952_low_14
Description: NF15952
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15952_low_14 |
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Alignment Details
Target: chr8 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 41853074 - 41852836
Alignment:
| Q |
1 |
ttttagaataatgaatcagcaatggtagctaggaatttacaagtgtccttgaagttaatattggaactacaatttcagcactttttagcagcatttattt |
100 |
Q |
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| T |
41853074 |
ttttagaataatgaatcagcaatggtagctaggaatttacaagtgtccttgaagttaatattggaactacaatttcagcactttttagcagcatttattt |
41852975 |
T |
|
| Q |
101 |
tcaaataagtagttgctccaaatttgcattggtacaatttgtgtctcacatgtttagtacaagatcgtcgaaaattcgcaatgataataatgagagctat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
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| T |
41852974 |
tcaaataagtagttgctccaaatttgcattggtacaatttgtgtctcacatgtttagtacaagagcgtcgaaaattcgcaatgataataatgagagctat |
41852875 |
T |
|
| Q |
201 |
taactaaagcgagctaagtgacataacagcatcattcat |
239 |
Q |
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| T |
41852874 |
taactaaagcgagctaagtgacataacagcatcattcat |
41852836 |
T |
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