View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15954_high_27 (Length: 315)

Name: NF15954_high_27
Description: NF15954
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15954_high_27
NF15954_high_27
[»] chr7 (1 HSPs)
chr7 (1-298)||(8283642-8283939)


Alignment Details
Target: chr7 (Bit Score: 257; Significance: 1e-143; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 1 - 298
Target Start/End: Complemental strand, 8283939 - 8283642
Alignment:
Q  1 tatatttaaacacaatannnnnnncttcaatagaacgctgcaaatattgtaaaaagtaaaatcaattatattaaaatataattgctcgatcggatctcaa 100  Q
    |||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8283939 tatatttaaacacaatatttttttcttcaatagaacgctgcaaatattgtaaaaagtaaaatcaattatattaaaatataattgctcgatcggatctcaa 8283840  T
Q  101 gtgacggatcttaaataacaccaaatcgatatacgaacaagtatagatcaaattttagccctaaaaatctaaacttcaaaaatttaaatcgattcgttta 200  Q
    |||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  8283839 gtgacgaatcttaaataacaccaaatcgatatacgaacgagtatagatcaaattttagccctaaaaatctaaacttcaaaattttaaatcgattcgttta 8283740  T
Q  201 ggttttttccttgttggggtcatataatcaaaactataatactttgtttgtttatataaccctgacatagaaaaatcgacatcgatttaagtcgtttc 298  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  8283739 ggttttttccttgttggggtcatataatcaaaactataatacttggtttgtttatataaccctgacatagaaaaatcaacatcgatttaagtcgtttc 8283642  T

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