View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15954_high_29 (Length: 285)
Name: NF15954_high_29
Description: NF15954
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15954_high_29 |
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Alignment Details
Target: chr5 (Bit Score: 132; Significance: 1e-68; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 13 - 144
Target Start/End: Complemental strand, 34041576 - 34041445
Alignment:
| Q |
13 |
aatatatataaggaaacctcatcaaaattcaacatattcacacatgcacatcccataattcaaatttgattgtgtcaaccctctaacttgttagttctta |
112 |
Q |
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| T |
34041576 |
aatatatataaggaaacctcatcaaaattcaacatattcacacatgcacatcccataattcaaatttgattgtgtcaaccctctaacttgttagttctta |
34041477 |
T |
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| Q |
113 |
ctaccataacaatcccaatatatataaataca |
144 |
Q |
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| T |
34041476 |
ctaccataacaatcccaatatatataaataca |
34041445 |
T |
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