View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15959_high_1_N (Length: 636)

Name: NF15959_high_1_N
Description: NF15959
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15959_high_1_N
NF15959_high_1_N
[»] chr3 (55 HSPs)
chr3 (4-201)||(6110064-6110261)
chr3 (4-201)||(10572602-10572799)
chr3 (4-201)||(15600894-15601091)
chr3 (4-201)||(15607439-15607636)
chr3 (4-198)||(13211305-13211499)
chr3 (4-201)||(13248607-13248804)
chr3 (4-199)||(16482493-16482688)
chr3 (4-195)||(17781128-17781319)
chr3 (4-195)||(10579365-10579556)
chr3 (4-199)||(18522665-18522860)
chr3 (15-201)||(8490488-8490674)
chr3 (4-201)||(15357596-15357793)
chr3 (4-199)||(18519980-18520172)
chr3 (4-195)||(19089755-19089946)
chr3 (4-199)||(17200194-17200389)
chr3 (4-182)||(15342229-15342407)
chr3 (4-199)||(13516813-13517008)
chr3 (40-201)||(18640792-18640953)
chr3 (4-195)||(32056910-32057101)
chr3 (9-195)||(1647536-1647726)
chr3 (13-199)||(16200128-16200313)
chr3 (9-201)||(29924971-29925163)
chr3 (9-201)||(29974124-29974316)
chr3 (13-199)||(16200434-16200619)
chr3 (4-194)||(24253398-24253589)
chr3 (4-95)||(17136465-17136556)
chr3 (137-199)||(18534758-18534820)
chr3 (237-294)||(6109971-6110028)
chr3 (237-294)||(13248514-13248571)
chr3 (237-293)||(8490396-8490452)
chr3 (237-295)||(13211209-13211267)
chr3 (237-293)||(18640989-18641045)
chr3 (237-293)||(17136137-17136193)
chr3 (243-293)||(10579603-10579653)
chr3 (237-294)||(15607672-15607730)
chr3 (237-294)||(15351237-15351294)
chr3 (237-294)||(15357829-15357886)
chr3 (237-294)||(17200427-17200484)
chr3 (154-199)||(18510924-18510969)
chr3 (237-293)||(16482727-16482782)
chr3 (237-293)||(18519885-18519941)
chr3 (243-294)||(10572840-10572891)
chr3 (237-295)||(13516717-13516775)
chr3 (237-294)||(15601127-15601185)
chr3 (237-294)||(17781358-17781415)
chr3 (237-294)||(19089985-19090042)
chr3 (237-293)||(1647768-1647824)
chr3 (518-614)||(11834132-11834228)
chr3 (237-293)||(32057144-32057200)
chr3 (334-437)||(23046330-23046433)
chr3 (237-294)||(18510828-18510885)
chr3 (237-294)||(18522569-18522626)
chr3 (237-294)||(18534662-18534719)
chr3 (237-293)||(29924879-29924935)
chr3 (237-293)||(29974032-29974088)
[»] scaffold0234 (4 HSPs)
scaffold0234 (4-201)||(2331-2528)
scaffold0234 (4-201)||(11222-11419)
scaffold0234 (237-294)||(2564-2621)
scaffold0234 (237-294)||(11455-11512)
[»] chr4 (52 HSPs)
chr4 (4-201)||(19926770-19926967)
chr4 (4-201)||(26970463-26970660)
chr4 (4-201)||(26963640-26963837)
chr4 (4-201)||(55612683-55612880)
chr4 (4-201)||(868597-868794)
chr4 (4-201)||(5707320-5707517)
chr4 (4-199)||(18262214-18262409)
chr4 (4-201)||(5713948-5714145)
chr4 (4-201)||(10621343-10621540)
chr4 (4-201)||(10628422-10628619)
chr4 (4-199)||(18269070-18269270)
chr4 (4-199)||(28393144-28393339)
chr4 (4-199)||(4426614-4426808)
chr4 (4-189)||(8845215-8845400)
chr4 (4-189)||(8858179-8858364)
chr4 (313-487)||(22339490-22339664)
chr4 (86-201)||(12357136-12357251)
chr4 (4-193)||(20311299-20311489)
chr4 (515-614)||(9650550-9650650)
chr4 (8-199)||(5616215-5616408)
chr4 (9-195)||(5668140-5668327)
chr4 (4-195)||(10677565-10677753)
chr4 (4-195)||(10891205-10891393)
chr4 (108-195)||(35223576-35223663)
chr4 (237-294)||(5713855-5713912)
chr4 (237-294)||(26963547-26963604)
chr4 (237-294)||(26970370-26970427)
chr4 (237-293)||(19927003-19927059)
chr4 (237-294)||(10621576-10621633)
chr4 (237-293)||(5707228-5707284)
chr4 (237-293)||(12357044-12357100)
chr4 (237-291)||(868507-868561)
chr4 (237-293)||(10628655-10628711)
chr4 (237-293)||(17142372-17142428)
chr4 (237-293)||(55612594-55612650)
chr4 (239-293)||(28393380-28393434)
chr4 (359-437)||(50882036-50882114)
chr4 (237-294)||(18268975-18269032)
chr4 (237-293)||(4426847-4426903)
chr4 (359-437)||(16635416-16635494)
chr4 (85-152)||(39074278-39074346)
chr4 (519-614)||(16569783-16569878)
chr4 (237-286)||(55992680-55992729)
chr4 (237-278)||(5668371-5668412)
chr4 (237-285)||(8845118-8845166)
chr4 (237-285)||(8858082-8858130)
chr4 (237-277)||(18262136-18262176)
chr4 (92-175)||(21454235-21454319)
chr4 (92-151)||(11161913-11161972)
chr4 (555-602)||(12452298-12452345)
chr4 (237-291)||(20311207-20311261)
chr4 (237-285)||(24699958-24700006)
[»] chr1 (28 HSPs)
chr1 (4-201)||(18252030-18252227)
chr1 (7-201)||(18532527-18532721)
chr1 (4-201)||(27131419-27131616)
chr1 (4-199)||(21171243-21171438)
chr1 (4-199)||(27310587-27310782)
chr1 (4-199)||(16359045-16359240)
chr1 (9-195)||(36816648-36816834)
chr1 (12-201)||(3855937-3856126)
chr1 (9-201)||(22657236-22657429)
chr1 (4-195)||(27277567-27277756)
chr1 (237-293)||(18251936-18251992)
chr1 (237-293)||(18532757-18532813)
chr1 (9-167)||(12006554-12006712)
chr1 (4-167)||(12014294-12014457)
chr1 (237-293)||(27310821-27310877)
chr1 (237-293)||(16359280-16359336)
chr1 (4-189)||(9917928-9918106)
chr1 (237-294)||(21171479-21171536)
chr1 (373-437)||(7589224-7589288)
chr1 (240-294)||(36816881-36816935)
chr1 (237-294)||(3856164-3856221)
chr1 (241-294)||(22657469-22657522)
chr1 (126-195)||(30720625-30720694)
chr1 (237-293)||(27131652-27131704)
chr1 (335-437)||(24067860-24067962)
chr1 (94-171)||(3403248-3403325)
chr1 (94-171)||(3443494-3443571)
chr1 (237-293)||(27277800-27277856)
[»] scaffold0220 (2 HSPs)
scaffold0220 (4-201)||(18288-18485)
scaffold0220 (237-293)||(18196-18252)
[»] chr7 (30 HSPs)
chr7 (4-201)||(29327784-29327981)
chr7 (4-201)||(11536072-11536269)
chr7 (4-201)||(11542990-11543187)
chr7 (4-199)||(15152445-15152640)
chr7 (4-199)||(15148144-15148339)
chr7 (4-199)||(18561009-18561204)
chr7 (9-199)||(12750828-12751018)
chr7 (4-195)||(12738542-12738733)
chr7 (9-199)||(18257857-18258047)
chr7 (515-606)||(14302226-14302317)
chr7 (13-195)||(13392157-13392338)
chr7 (237-294)||(11543223-11543280)
chr7 (237-293)||(2653275-2653331)
chr7 (237-293)||(12738443-12738499)
chr7 (108-195)||(39111819-39111905)
chr7 (9-179)||(2364917-2365086)
chr7 (237-294)||(11536305-11536362)
chr7 (237-294)||(12750732-12750789)
chr7 (237-294)||(15152349-15152406)
chr7 (238-294)||(29327689-29327745)
chr7 (9-168)||(7396221-7396381)
chr7 (237-293)||(15148049-15148105)
chr7 (238-294)||(13392029-13392085)
chr7 (84-127)||(3132748-3132791)
chr7 (86-151)||(10234179-10234244)
chr7 (237-293)||(18258087-18258143)
chr7 (169-201)||(2653207-2653239)
chr7 (237-293)||(18560913-18560969)
chr7 (533-614)||(19381654-19381734)
chr7 (373-437)||(7157465-7157529)
[»] chr6 (29 HSPs)
chr6 (4-201)||(27381262-27381459)
chr6 (4-201)||(27471645-27471842)
chr6 (4-199)||(17684479-17684674)
chr6 (4-201)||(29308890-29309087)
chr6 (4-201)||(29315850-29316047)
chr6 (4-199)||(16566330-16566525)
chr6 (4-201)||(17691450-17691647)
chr6 (4-199)||(188987-189182)
chr6 (4-199)||(25537169-25537364)
chr6 (4-199)||(11651725-11651920)
chr6 (11-199)||(13359286-13359474)
chr6 (237-291)||(17691683-17691737)
chr6 (4-162)||(20553597-20553755)
chr6 (237-294)||(27381495-27381552)
chr6 (237-294)||(27471878-27471935)
chr6 (237-294)||(29308797-29308854)
chr6 (237-294)||(29315757-29315814)
chr6 (237-294)||(17684712-17684769)
chr6 (239-293)||(11651630-11651684)
chr6 (237-294)||(25537405-25537462)
chr6 (9-182)||(8509941-8510115)
chr6 (9-178)||(27925772-27925946)
chr6 (139-194)||(31258065-31258120)
chr6 (237-294)||(13359512-13359569)
chr6 (237-285)||(16566563-16566611)
chr6 (55-163)||(17850555-17850663)
chr6 (237-293)||(189221-189280)
chr6 (237-279)||(16394484-16394526)
chr6 (120-185)||(22259925-22259990)
[»] chr2 (16 HSPs)
chr2 (5-201)||(21330259-21330455)
chr2 (4-201)||(18796506-18796703)
chr2 (4-199)||(18619807-18620001)
chr2 (56-195)||(19692598-19692737)
chr2 (9-136)||(20977957-20978084)
chr2 (518-614)||(23167725-23167821)
chr2 (518-614)||(23578982-23579078)
chr2 (237-293)||(21330493-21330549)
chr2 (9-167)||(18822115-18822275)
chr2 (4-167)||(36270199-36270363)
chr2 (359-437)||(23689061-23689139)
chr2 (556-614)||(28773056-28773114)
chr2 (237-294)||(19692773-19692830)
chr2 (555-614)||(34136033-34136092)
chr2 (237-294)||(18796411-18796470)
chr2 (10-165)||(36802664-36802820)
[»] scaffold0390 (4 HSPs)
scaffold0390 (4-201)||(6944-7141)
scaffold0390 (4-201)||(13960-14157)
scaffold0390 (237-294)||(7177-7234)
scaffold0390 (237-293)||(14193-14249)
[»] chr8 (21 HSPs)
chr8 (4-201)||(21940665-21940862)
chr8 (4-199)||(28554885-28555080)
chr8 (11-195)||(6094129-6094313)
chr8 (4-199)||(22171491-22171684)
chr8 (4-195)||(24642655-24642846)
chr8 (68-195)||(24636860-24636987)
chr8 (515-614)||(23638598-23638697)
chr8 (237-293)||(21940573-21940629)
chr8 (237-293)||(22070108-22070164)
chr8 (237-294)||(22171395-22171452)
chr8 (241-294)||(24642555-24642608)
chr8 (237-293)||(6094031-6094087)
chr8 (237-294)||(28554790-28554847)
chr8 (10-171)||(32872857-32873019)
chr8 (359-437)||(40755860-40755938)
chr8 (519-614)||(17624513-17624608)
chr8 (130-189)||(38232512-38232570)
chr8 (122-180)||(2375027-2375085)
chr8 (100-163)||(10920234-10920297)
chr8 (240-294)||(2374946-2375000)
chr8 (256-293)||(24636605-24636642)
[»] scaffold0433 (2 HSPs)
scaffold0433 (4-201)||(7107-7304)
scaffold0433 (237-294)||(7014-7071)
[»] chr5 (23 HSPs)
chr5 (4-201)||(24695476-24695673)
chr5 (4-201)||(18569873-18570070)
chr5 (4-199)||(19714508-19714703)
chr5 (4-195)||(19707228-19707419)
chr5 (13-196)||(27347497-27347679)
chr5 (9-195)||(22547031-22547217)
chr5 (92-201)||(39537962-39538071)
chr5 (16-197)||(17285754-17285935)
chr5 (237-294)||(24695709-24695766)
chr5 (92-195)||(31886537-31886640)
chr5 (237-293)||(19714742-19714798)
chr5 (16-197)||(17298907-17299088)
chr5 (237-294)||(19707462-19707519)
chr5 (237-293)||(27347722-27347778)
chr5 (10-135)||(18807050-18807175)
chr5 (4-88)||(39538701-39538785)
chr5 (85-175)||(33477389-33477479)
chr5 (237-294)||(18570108-18570165)
chr5 (533-605)||(10178444-10178516)
chr5 (238-293)||(39537870-39537925)
chr5 (359-437)||(19183638-19183716)
chr5 (533-587)||(24192526-24192580)
chr5 (83-151)||(11479420-11479489)
[»] scaffold0657 (2 HSPs)
scaffold0657 (4-201)||(993-1190)
scaffold0657 (237-293)||(901-957)
[»] scaffold0186 (2 HSPs)
scaffold0186 (4-201)||(26000-26197)
scaffold0186 (238-294)||(26231-26287)
[»] scaffold0063 (2 HSPs)
scaffold0063 (4-199)||(5531-5726)
scaffold0063 (237-294)||(5435-5492)
[»] scaffold0008 (2 HSPs)
scaffold0008 (18-199)||(230365-230545)
scaffold0008 (237-293)||(230584-230640)
[»] scaffold0028 (1 HSPs)
scaffold0028 (515-614)||(39922-40021)
[»] scaffold1923 (1 HSPs)
scaffold1923 (515-614)||(1083-1182)
[»] scaffold0035 (1 HSPs)
scaffold0035 (515-609)||(34768-34862)
[»] scaffold0176 (2 HSPs)
scaffold0176 (137-201)||(8446-8510)
scaffold0176 (237-294)||(8546-8603)
[»] scaffold0203 (1 HSPs)
scaffold0203 (237-294)||(23769-23826)
[»] scaffold0326 (2 HSPs)
scaffold0326 (237-294)||(16522-16579)
scaffold0326 (168-201)||(16615-16648)
[»] scaffold0705 (1 HSPs)
scaffold0705 (237-294)||(41-98)
[»] scaffold0637 (1 HSPs)
scaffold0637 (237-293)||(8944-9000)
[»] scaffold0565 (2 HSPs)
scaffold0565 (237-291)||(10202-10256)
scaffold0565 (151-182)||(10127-10158)
[»] scaffold0767 (1 HSPs)
scaffold0767 (257-293)||(1-37)
[»] scaffold0267 (1 HSPs)
scaffold0267 (361-437)||(8615-8691)
[»] scaffold0170 (1 HSPs)
scaffold0170 (241-294)||(5877-5930)
[»] scaffold0650 (1 HSPs)
scaffold0650 (359-434)||(6516-6591)
[»] scaffold0032 (1 HSPs)
scaffold0032 (100-172)||(92194-92267)
[»] scaffold0453 (1 HSPs)
scaffold0453 (373-437)||(9396-9460)


Alignment Details
Target: chr3 (Bit Score: 194; Significance: 1e-105; HSPs: 55)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 4 - 201
Target Start/End: Complemental strand, 6110261 - 6110064
Alignment:
Q  4 tacctacataatagtctctatgctttaatgatatcccacttctcaacaaaacttgactacggatactttgagaatagtttccttatgtttaatggggtct 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  6110261 tacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatggggtct 6110162  T
Q  104 cacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 201  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6110161 cacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 6110064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 4 - 201
Target Start/End: Original strand, 10572602 - 10572799
Alignment:
Q  4 tacctacataatagtctctatgctttaatgatatcccacttctcaacaaaacttgactacggatactttgagaatagtttccttatgtttaatggggtct 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  10572602 tacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatggggtct 10572701  T
Q  104 cacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 201  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10572702 cacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 10572799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 4 - 201
Target Start/End: Original strand, 15600894 - 15601091
Alignment:
Q  4 tacctacataatagtctctatgctttaatgatatcccacttctcaacaaaacttgactacggatactttgagaatagtttccttatgtttaatggggtct 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  15600894 tacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatggggtct 15600993  T
Q  104 cacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 201  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  15600994 cacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgtcttgt 15601091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 4 - 201
Target Start/End: Original strand, 15607439 - 15607636
Alignment:
Q  4 tacctacataatagtctctatgctttaatgatatcccacttctcaacaaaacttgactacggatactttgagaatagtttccttatgtttaatggggtct 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  15607439 tacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatggggtct 15607538  T
Q  104 cacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 201  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  15607539 cacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgtcttgt 15607636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 4 - 198
Target Start/End: Complemental strand, 13211499 - 13211305
Alignment:
Q  4 tacctacataatagtctctatgctttaatgatatcccacttctcaacaaaacttgactacggatactttgagaatagtttccttatgtttaatggggtct 103  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  13211499 tacctacataatagtctctatgctttaatgatatctcacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatggggtct 13211400  T
Q  104 cacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcct 198  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13211399 cacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcct 13211305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 4 - 201
Target Start/End: Complemental strand, 13248804 - 13248607
Alignment:
Q  4 tacctacataatagtctctatgctttaatgatatcccacttctcaacaaaacttgactacggatactttgagaatagtttccttatgtttaatggggtct 103  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  13248804 tacctacataatagtctctatgctttaatgttatcccacttctcaacaaagcttgactacgaatactttgagaatagtttccttatgtttaatggggtct 13248705  T
Q  104 cacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 201  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13248704 cacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 13248607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 184; E-Value: 3e-99
Query Start/End: Original strand, 4 - 199
Target Start/End: Original strand, 16482493 - 16482688
Alignment:
Q  4 tacctacataatagtctctatgctttaatgatatcccacttctcaacaaaacttgactacggatactttgagaatagtttccttatgtttaatggggtct 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| ||||||||||||||||||||||||||    
T  16482493 tacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagagtagtttccttatgtttaatggggtct 16482592  T
Q  104 cacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcctt 199  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16482593 cacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcctt 16482688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 184; E-Value: 3e-99
Query Start/End: Original strand, 4 - 195
Target Start/End: Original strand, 17781128 - 17781319
Alignment:
Q  4 tacctacataatagtctctatgctttaatgatatcccacttctcaacaaaacttgactacggatactttgagaatagtttccttatgtttaatggggtct 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  17781128 tacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgtttaatggggtct 17781227  T
Q  104 cacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatg 195  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17781228 cacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatg 17781319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 180; E-Value: 7e-97
Query Start/End: Original strand, 4 - 195
Target Start/End: Original strand, 10579365 - 10579556
Alignment:
Q  4 tacctacataatagtctctatgctttaatgatatcccacttctcaacaaaacttgactacggatactttgagaatagtttccttatgtttaatggggtct 103  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  10579365 tacctacataatagtctctatgctttaatgatatctcacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatggggtct 10579464  T
Q  104 cacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatg 195  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10579465 cacaattaagttatacttaatgttccatttaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatg 10579556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 180; E-Value: 7e-97
Query Start/End: Original strand, 4 - 199
Target Start/End: Complemental strand, 18522860 - 18522665
Alignment:
Q  4 tacctacataatagtctctatgctttaatgatatcccacttctcaacaaaacttgactacggatactttgagaatagtttccttatgtttaatggggtct 103  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| ||| |||||||||||||||||| ||||||||||||||||||||||||||||||    
T  18522860 tacctacataatagtctctatgcttaaatgatatcccacttctcaataaagcttgactacggatactttaagaatagtttccttatgtttaatggggtct 18522761  T
Q  104 cacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcctt 199  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18522760 cacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcctt 18522665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 175; E-Value: 7e-94
Query Start/End: Original strand, 15 - 201
Target Start/End: Complemental strand, 8490674 - 8490488
Alignment:
Q  15 tagtctctatgctttaatgatatcccacttctcaacaaaacttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagt 114  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8490674 tagtctctatgctttaatgatatcccacttctcaacaaagcttgactacagatactttgagaatagtttccttatgtttaatggggtctcacaattaagt 8490575  T
Q  115 tatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 201  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8490574 tatacttaatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 8490488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 174; E-Value: 3e-93
Query Start/End: Original strand, 4 - 201
Target Start/End: Original strand, 15357596 - 15357793
Alignment:
Q  4 tacctacataatagtctctatgctttaatgatatcccacttctcaacaaaacttgactacggatactttgagaatagtttccttatgtttaatggggtct 103  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  15357596 tacctacataatagtctctatgttttaatgatatcccacttctcaataaagcttgactacggatactttgagaataggttccttatgtttaatggggtct 15357695  T
Q  104 cacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 201  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  15357696 cacaattaagttatacttaatgttccattaaacggactaactaatctagggactttattattttgaaacaaaacaaaatcaataaagaaatgtcttgt 15357793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 166; E-Value: 2e-88
Query Start/End: Original strand, 4 - 199
Target Start/End: Complemental strand, 18520172 - 18519980
Alignment:
Q  4 tacctacataatagtctctatgctttaatgatatcccacttctcaacaaaacttgactacggatactttgagaatagtttccttatgtttaatggggtct 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||   || |||||||||||||||||||||| |||||||    
T  18520172 tacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggat---ttaagaatagtttccttatgtttaacggggtct 18520076  T
Q  104 cacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcctt 199  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18520075 cacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcctt 18519980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 4 - 195
Target Start/End: Original strand, 19089755 - 19089946
Alignment:
Q  4 tacctacataatagtctctatgctttaatgatatcccacttctcaacaaaacttgactacggatactttgagaatagtttccttatgtttaatggggtct 103  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||||||||||||||| ||||||||||| |||||||||| |||||||    
T  19089755 tacctacataatagtctctatgatttaatgatatcccacttctcaataaagcttgactacggatactttaagaatagtttcattatgtttaaaggggtct 19089854  T
Q  104 cacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatg 195  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  19089855 cacaattaagttatacttaatgttccattaaacggactaactaatctagggactttattattttgaaacaaaacaaaatcaataaagaaatg 19089946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 4 - 199
Target Start/End: Original strand, 17200194 - 17200389
Alignment:
Q  4 tacctacataatagtctctatgctttaatgatatcccacttctcaacaaaacttgactacggatactttgagaatagtttccttatgtttaatggggtct 103  Q
    |||| |||||||||||||||||||||||||||||| ||| |||||| ||| ||| |||||||||||||| ||||||||||| |||||||||| ||||| |    
T  17200194 tacccacataatagtctctatgctttaatgatatcacacatctcaataaagcttaactacggatactttaagaatagtttcattatgtttaaaggggtat 17200293  T
Q  104 cacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcctt 199  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17200294 cacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcctt 17200389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 155; E-Value: 6e-82
Query Start/End: Original strand, 4 - 182
Target Start/End: Original strand, 15342229 - 15342407
Alignment:
Q  4 tacctacataatagtctctatgctttaatgatatcccacttctcaacaaaacttgactacggatactttgagaatagtttccttatgtttaatggggtct 103  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  15342229 tacctacataatagtctctatgttttaatgatatcccacttctcaataaagcttgactacggatactttgagaataggttccttatgtttaatggggtct 15342328  T
Q  104 cacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaat 182  Q
    |||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||    
T  15342329 cacaattaagttatacttaatgttccattaaacgaacaaactattctagggactttattattttgaaacaaaacaaaat 15342407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 152; E-Value: 4e-80
Query Start/End: Original strand, 4 - 199
Target Start/End: Complemental strand, 13517008 - 13516813
Alignment:
Q  4 tacctacataatagtctctatgctttaatgatatcccacttctcaacaaaacttgactacggatactttgagaatagtttccttatgtttaatggggtct 103  Q
    |||| |||||||||||||| |||||||||||||||| ||||||||| ||| ||||||||| |||||||| ||||| |||||||||||||||| |||||||    
T  13517008 tacccacataatagtctctgtgctttaatgatatcctacttctcaataaagcttgactacagatactttaagaatcgtttccttatgtttaacggggtct 13516909  T
Q  104 cacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcctt 199  Q
    |||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13516908 cacaattaagttatacttaatgttccatgaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcctt 13516813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 150; E-Value: 6e-79
Query Start/End: Original strand, 40 - 201
Target Start/End: Original strand, 18640792 - 18640953
Alignment:
Q  40 cacttctcaacaaaacttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacgga 139  Q
    |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  18640792 cacttctcaataaagcttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaatgga 18640891  T
Q  140 ctaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 201  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18640892 ctaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 18640953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 4 - 195
Target Start/End: Original strand, 32056910 - 32057101
Alignment:
Q  4 tacctacataatagtctctatgctttaatgatatcccacttctcaacaaaacttgactacggatactttgagaatagtttccttatgtttaatggggtct 103  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| |||  ||||||||||| ||||| ||||||||||| |||||||||| |||||||    
T  32056910 tacccacataatagtctctatgctttaatgatatcccacttctcaataaagtttgactacggacactttaagaatagtttctttatgtttaacggggtct 32057009  T
Q  104 cacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatg 195  Q
     ||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32057010 tacaataaagttatacttgatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatg 32057101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 9 - 195
Target Start/End: Original strand, 1647536 - 1647726
Alignment:
Q  9 acataatagtctctatgctttaatgatatcccacttctcaacaaaacttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaa 108  Q
    |||||||||||||||||||||||| |||||||  ||||||| ||| ||||| |||||||||||| | |||||||||||||||||||| ||||||||||||    
T  1647536 acataatagtctctatgctttaattatatcccttttctcaataaagcttgattacggatactttaaaaatagtttccttatgtttaacggggtctcacaa 1647635  T
Q  109 ttaagtta----tacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatg 195  Q
    ||||||||    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1647636 ttaagttaattatacttaatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatg 1647726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 13 - 199
Target Start/End: Complemental strand, 16200313 - 16200128
Alignment:
Q  13 aatagtctctatgctttaatgatatcccacttctcaacaaaacttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaa 112  Q
    ||||||||| ||||||||||||||||||||||| ||| ||| |||||||||| ||||||| |||||| | ||||||||||||||||||||||||||||||    
T  16200313 aatagtctccatgctttaatgatatcccacttcacaataaatcttgactacgaatactttaagaataatgtccttatgtttaatggggtctcacaattaa 16200214  T
Q  113 gttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcctt 199  Q
    ||||||| ||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| |||| |||  ||||||||||||    
T  16200213 gttatacataatgttccattaaacgaactaactattctaaggactttattattttgaaacaaaataaaa-caacgaagaaatgcctt 16200128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 9 - 201
Target Start/End: Complemental strand, 29925163 - 29924971
Alignment:
Q  9 acataatagtctctatgctttaatgatatcccacttctcaacaaaacttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaa 108  Q
    ||||||||| ||| |||||||||||||||| |||||| ||| ||| |||||||||  ||| ||| |||||| | ||||||| ||||||||||||||||||    
T  29925163 acataatagcctccatgctttaatgatatctcacttcacaataaagcttgactacatatattttaagaataatgtccttatatttaatggggtctcacaa 29925064  T
Q  109 ttaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 201  Q
    |||| |||||||||||  |||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||| |||||    
T  29925063 ttaaattatacttaataatccattaaacggactaactattttaggggctttattattttgaaacaaaacaaaatcaataaagaaatgtcttgt 29924971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 9 - 201
Target Start/End: Complemental strand, 29974316 - 29974124
Alignment:
Q  9 acataatagtctctatgctttaatgatatcccacttctcaacaaaacttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaa 108  Q
    ||||||||| ||| |||||||||||||||| |||||| ||| ||| |||||||||  ||| ||| |||||| | ||||||| ||||||||||||||||||    
T  29974316 acataatagcctccatgctttaatgatatctcacttcacaataaagcttgactacatatattttaagaataatgtccttatatttaatggggtctcacaa 29974217  T
Q  109 ttaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 201  Q
    |||| |||||||||||  |||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||| |||||    
T  29974216 ttaaattatacttaataatccattaaacggactaactattttaggggctttattattttgaaacaaaacaaaatcaataaagaaatgtcttgt 29974124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 13 - 199
Target Start/End: Complemental strand, 16200619 - 16200434
Alignment:
Q  13 aatagtctctatgctttaatgatatcccacttctcaacaaaacttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaa 112  Q
    ||||||||  |||||||||||| |||||||||| ||| ||| |||||||||| ||||||| |||||| | |||||||||||| ||| |||||||||||||    
T  16200619 aatagtcttcatgctttaatgacatcccacttcacaataaatcttgactacgaatactttaagaataatgtccttatgtttattggagtctcacaattaa 16200520  T
Q  113 gttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcctt 199  Q
    ||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| |||  ||||||||||||    
T  16200519 gttatacataatgttccattaaacggactaactattctaaggactttattattttgaaacaaaataaaa-caacgaagaaatgcctt 16200434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 4 - 194
Target Start/End: Original strand, 24253398 - 24253589
Alignment:
Q  4 tacctacataatagtctctatgctttaatgatatcccacttctcaacaaaacttgactacggatactttgagaatagtttccttatgtttaatgggg-tc 102  Q
    |||| ||||||||||||||||||||||||| || | |||||  ||| |||  ||||| ||  ||||||| |||||||| ||||||||||| |||||| ||    
T  24253398 taccgacataatagtctctatgctttaatgttacctcactttacaataaattttgaccacatatactttaagaatagtgtccttatgtttgatggggatc 24253497  T
Q  103 tcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaat 194  Q
    |||| ||||||| |||||||||||||||| ||||| || | |||||||| ||||||||||||||||||  ||||||||||||||||||||||    
T  24253498 tcacgattaagtcatacttaatgttccatcaaacgaacgagctattctaaggactttattattttgaagtaaaacaaaatcaataaagaaat 24253589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 4 - 95
Target Start/End: Complemental strand, 17136556 - 17136465
Alignment:
Q  4 tacctacataatagtctctatgctttaatgatatcccacttctcaacaaaacttgactacggatactttgagaatagtttccttatgtttaa 95  Q
    |||| ||||||||||||||||| ||||||||||||||||||||||| ||| |||||||||||||||||| ||||||||||||||||||||||    
T  17136556 tacccacataatagtctctatgttttaatgatatcccacttctcaataaagcttgactacggatactttaagaatagtttccttatgtttaa 17136465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 137 - 199
Target Start/End: Complemental strand, 18534820 - 18534758
Alignment:
Q  137 ggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcctt 199  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  18534820 ggactaactattctatggactttattattttgaaacaaaacaaaatcaataaagaaatgcctt 18534758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 237 - 294
Target Start/End: Complemental strand, 6110028 - 6109971
Alignment:
Q  237 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 294  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6110028 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 6109971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 237 - 294
Target Start/End: Complemental strand, 13248571 - 13248514
Alignment:
Q  237 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 294  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13248571 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 13248514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 237 - 293
Target Start/End: Complemental strand, 8490452 - 8490396
Alignment:
Q  237 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 293  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8490452 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 8490396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 237 - 295
Target Start/End: Complemental strand, 13211267 - 13211209
Alignment:
Q  237 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaag 295  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  13211267 catgatacaaaaccaaacccaatcaatatagattggctattagggcttattccaacaag 13211209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 237 - 293
Target Start/End: Original strand, 18640989 - 18641045
Alignment:
Q  237 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 293  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  18640989 catgatacaaagccaaacacaatcaatatagattggctattagggcttattccaaca 18641045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 237 - 293
Target Start/End: Complemental strand, 17136193 - 17136137
Alignment:
Q  237 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 293  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  17136193 catgatacaaagccaaactcaatcaatatagattggctattagggcttactccaaca 17136137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 243 - 293
Target Start/End: Original strand, 10579603 - 10579653
Alignment:
Q  243 acaaagccaaacccaatcaatatagattggctattagggcttattccaaca 293  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  10579603 acaaagtcaaacccaatcaatatagattggctattagggcttattccaaca 10579653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 237 - 294
Target Start/End: Original strand, 15607672 - 15607730
Alignment:
Q  237 catgatacaaagccaaacccaatcaa-tatagattggctattagggcttattccaacaa 294  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||    
T  15607672 catgatacaaagccaaacccaataaaatatagattggctattagggcttattccaacaa 15607730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 237 - 294
Target Start/End: Original strand, 15351237 - 15351294
Alignment:
Q  237 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 294  Q
    |||||||||||||||||  |||||| ||||||||||||||||||||||||||||||||    
T  15351237 catgatacaaagccaaaatcaatcattatagattggctattagggcttattccaacaa 15351294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 237 - 294
Target Start/End: Original strand, 15357829 - 15357886
Alignment:
Q  237 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 294  Q
    |||||||||||||||||  |||||| ||||||||||||||||||||||||||||||||    
T  15357829 catgatacaaagccaaaatcaatcattatagattggctattagggcttattccaacaa 15357886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 237 - 294
Target Start/End: Original strand, 17200427 - 17200484
Alignment:
Q  237 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 294  Q
    |||| ||||||||||||||||||||| |||||||||||||||||||||| ||||||||    
T  17200427 catgctacaaagccaaacccaatcaacatagattggctattagggcttactccaacaa 17200484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 154 - 199
Target Start/End: Complemental strand, 18510969 - 18510924
Alignment:
Q  154 gactttattattttgaaacaaaacaaaatcaataaagaaatgcctt 199  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  18510969 gactttattattttgaaacaaaacaaaatcaataaagaaatgcctt 18510924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 237 - 293
Target Start/End: Original strand, 16482727 - 16482782
Alignment:
Q  237 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 293  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||    
T  16482727 catgatacaaagccaaacccaatcaatatagattgg-tattagggcttattctaaca 16482782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 237 - 293
Target Start/End: Complemental strand, 18519941 - 18519885
Alignment:
Q  237 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 293  Q
    ||||||||||| |||||||||||||||||||||||||||||||| |||| |||||||    
T  18519941 catgatacaaaaccaaacccaatcaatatagattggctattaggacttactccaaca 18519885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 243 - 294
Target Start/End: Original strand, 10572840 - 10572891
Alignment:
Q  243 acaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 294  Q
    |||||| |||||||||||||||||| ||||||||||||||||||||||||||    
T  10572840 acaaagtcaaacccaatcaatataggttggctattagggcttattccaacaa 10572891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 237 - 295
Target Start/End: Complemental strand, 13516775 - 13516717
Alignment:
Q  237 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaag 295  Q
    ||||||||| |||||||| ||||||| |||||||||||||||||||||| |||||||||    
T  13516775 catgatacacagccaaactcaatcaacatagattggctattagggcttactccaacaag 13516717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 237 - 294
Target Start/End: Original strand, 15601127 - 15601185
Alignment:
Q  237 catgatacaaagccaaacccaatcaa-tatagattggctattagggcttattccaacaa 294  Q
    ||||||||||| ||||||||||| || ||||||||||||||||||||||||||||||||    
T  15601127 catgatacaaatccaaacccaataaaatatagattggctattagggcttattccaacaa 15601185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 237 - 294
Target Start/End: Original strand, 17781358 - 17781415
Alignment:
Q  237 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 294  Q
    ||||||| ||| |||||| |||||||||||||||||||||||||||||| ||||||||    
T  17781358 catgatataaaaccaaactcaatcaatatagattggctattagggcttactccaacaa 17781415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 237 - 294
Target Start/End: Original strand, 19089985 - 19090042
Alignment:
Q  237 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 294  Q
    ||||||| ||| |||||| |||||||||||||||||||||||||||||| ||||||||    
T  19089985 catgatataaaaccaaactcaatcaatatagattggctattagggcttactccaacaa 19090042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 237 - 293
Target Start/End: Original strand, 1647768 - 1647824
Alignment:
Q  237 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 293  Q
    ||||||||||||||||||||||||||||||||   |||||||||||||| |||||||    
T  1647768 catgatacaaagccaaacccaatcaatatagaccagctattagggcttactccaaca 1647824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 518 - 614
Target Start/End: Original strand, 11834132 - 11834228
Alignment:
Q  518 tttggtgaattgtacacttgatgatatttgatgaatatgtgaagatgtgtacttgttgatgtttgttattaatggtgatacttgtacatttgatgat 614  Q
    |||||||||| ||  | ||| ||| ||||| |||| ||||||||||||||||||| ||||||||||| ||  |||||||||||||||| ||| ||||    
T  11834132 tttggtgaatggtgtatttggtgaaatttggtgaacatgtgaagatgtgtacttggtgatgtttgttgtttttggtgatacttgtacacttggtgat 11834228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 237 - 293
Target Start/End: Original strand, 32057144 - 32057200
Alignment:
Q  237 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 293  Q
    |||||||||||| ||||||||||||| |||||||||||||||| ||||| |||||||    
T  32057144 catgatacaaagtcaaacccaatcaacatagattggctattagagcttactccaaca 32057200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 334 - 437
Target Start/End: Original strand, 23046330 - 23046433
Alignment:
Q  334 gtgataacacttaagatgtattaccattttagcttgacgtacacatgttttgatctcgattttatagatccttgcaaagttatgctgattttgtgtgtct 433  Q
    |||||||||| ||| ||| | ||  ||||||||| ||| ||||||| |||| |||||||||||||||||  |||||| |||||| || | ||||||||||    
T  23046330 gtgataacacgtaaaatgcaatattattttagctcgacttacacatttttttatctcgattttatagatttttgcaatgttatgttggtattgtgtgtct 23046429  T
Q  434 attt 437  Q
    ||||    
T  23046430 attt 23046433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 237 - 294
Target Start/End: Complemental strand, 18510885 - 18510828
Alignment:
Q  237 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 294  Q
    |||||||||||  ||||| ||||||||||||||||| |||||||||||| ||||||||    
T  18510885 catgatacaaaatcaaactcaatcaatatagattggatattagggcttactccaacaa 18510828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 237 - 294
Target Start/End: Complemental strand, 18522626 - 18522569
Alignment:
Q  237 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 294  Q
    |||||||||||  ||||| ||||||||||||||||| |||||||||||| ||||||||    
T  18522626 catgatacaaaatcaaactcaatcaatatagattggatattagggcttactccaacaa 18522569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 237 - 294
Target Start/End: Complemental strand, 18534719 - 18534662
Alignment:
Q  237 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 294  Q
    ||||||||||| |||||| |||||||||||||||| ||||||||||||| | ||||||    
T  18534719 catgatacaaaaccaaactcaatcaatatagattgactattagggcttactacaacaa 18534662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 237 - 293
Target Start/End: Complemental strand, 29924935 - 29924879
Alignment:
Q  237 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 293  Q
    |||||||||| | ||||| |||||||||||||| | ||||||||||||| |||||||    
T  29924935 catgatacaatgtcaaactcaatcaatatagatcgactattagggcttactccaaca 29924879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 237 - 293
Target Start/End: Complemental strand, 29974088 - 29974032
Alignment:
Q  237 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 293  Q
    |||||||||| | ||||| |||||||||||||| | ||||||||||||| |||||||    
T  29974088 catgatacaatgtcaaactcaatcaatatagatcgactattagggcttactccaaca 29974032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234 (Bit Score: 190; Significance: 1e-103; HSPs: 4)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 4 - 201
Target Start/End: Original strand, 2331 - 2528
Alignment:
Q  4 tacctacataatagtctctatgctttaatgatatcccacttctcaacaaaacttgactacggatactttgagaatagtttccttatgtttaatggggtct 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  2331 tacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgtttaatggggtct 2430  T
Q  104 cacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 201  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2431 cacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 2528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234; HSP #2
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 4 - 201
Target Start/End: Original strand, 11222 - 11419
Alignment:
Q  4 tacctacataatagtctctatgctttaatgatatcccacttctcaacaaaacttgactacggatactttgagaatagtttccttatgtttaatggggtct 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  11222 tacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgtttaatggggtct 11321  T
Q  104 cacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 201  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11322 cacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 11419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234; HSP #3
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 237 - 294
Target Start/End: Original strand, 2564 - 2621
Alignment:
Q  237 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 294  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2564 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 2621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234; HSP #4
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 237 - 294
Target Start/End: Original strand, 11455 - 11512
Alignment:
Q  237 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 294  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11455 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 11512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 190; Significance: 1e-103; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 4 - 201
Target Start/End: Original strand, 19926770 - 19926967
Alignment:
Q  4 tacctacataatagtctctatgctttaatgatatcccacttctcaacaaaacttgactacggatactttgagaatagtttccttatgtttaatggggtct 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  19926770 tacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgtttaatggggtct 19926869  T
Q  104 cacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 201  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19926870 cacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 19926967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 4 - 201
Target Start/End: Complemental strand, 26970660 - 26970463
Alignment:
Q  4 tacctacataatagtctctatgctttaatgatatcccacttctcaacaaaacttgactacggatactttgagaatagtttccttatgtttaatggggtct 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  26970660 tacctacataatagtctctatgctttaatgatatcccacttctcaataaatcttgactacggatactttgagaatagtttccttatgtttaatggggtct 26970561  T
Q  104 cacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 201  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26970560 cacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 26970463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 4 - 201
Target Start/End: Complemental strand, 26963837 - 26963640
Alignment:
Q  4 tacctacataatagtctctatgctttaatgatatcccacttctcaacaaaacttgactacggatactttgagaatagtttccttatgtttaatggggtct 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  26963837 tacctacataatagtctctatgctttaatgatatcccacttctcaataaatcttgactacggatactttgagaatagtttccttatgtttaatggggtct 26963738  T
Q  104 cacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 201  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26963737 cacaattaagttatatttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 26963640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 4 - 201
Target Start/End: Complemental strand, 55612880 - 55612683
Alignment:
Q  4 tacctacataatagtctctatgctttaatgatatcccacttctcaacaaaacttgactacggatactttgagaatagtttccttatgtttaatggggtct 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| ||||||||||||||||||||||||||    
T  55612880 tacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagagtagtttccttatgtttaatggggtct 55612781  T
Q  104 cacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 201  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55612780 cacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 55612683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 182; E-Value: 4e-98
Query Start/End: Original strand, 4 - 201
Target Start/End: Complemental strand, 868794 - 868597
Alignment:
Q  4 tacctacataatagtctctatgctttaatgatatcccacttctcaacaaaacttgactacggatactttgagaatagtttccttatgtttaatggggtct 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  868794 tacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaacggggtct 868695  T
Q  104 cacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 201  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  868694 cacaattaagttatacttaatgttccattaaatggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgtcttgt 868597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 182; E-Value: 4e-98
Query Start/End: Original strand, 4 - 201
Target Start/End: Complemental strand, 5707517 - 5707320
Alignment:
Q  4 tacctacataatagtctctatgctttaatgatatcccacttctcaacaaaacttgactacggatactttgagaatagtttccttatgtttaatggggtct 103  Q
    ||||||||||||||||||||||||||||||||||| |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  5707517 tacctacataatagtctctatgctttaatgatatctcacttctcaataaagcttgactacggatactttgagaatagtttccttatgtttaatggggtct 5707418  T
Q  104 cacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 201  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5707417 cacaattaagttatacttaatgttccattaaatggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 5707320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 180; E-Value: 7e-97
Query Start/End: Original strand, 4 - 199
Target Start/End: Complemental strand, 18262409 - 18262214
Alignment:
Q  4 tacctacataatagtctctatgctttaatgatatcccacttctcaacaaaacttgactacggatactttgagaatagtttccttatgtttaatggggtct 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  18262409 tacctacataatagtctctatgctttaatgatatcccacttctcatcaaagcttgactacggatactttgagaatagtttccttatgtttaacggggtct 18262310  T
Q  104 cacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcctt 199  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  18262309 cacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacgaaacaaaatcaataaagaaatgcctt 18262214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 178; E-Value: 1e-95
Query Start/End: Original strand, 4 - 201
Target Start/End: Complemental strand, 5714145 - 5713948
Alignment:
Q  4 tacctacataatagtctctatgctttaatgatatcccacttctcaacaaaacttgactacggatactttgagaatagtttccttatgtttaatggggtct 103  Q
    ||||||||||||||||||||||||||||||||||| |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  5714145 tacctacataatagtctctatgctttaatgatatctcacttctcaataaagcttgactacggatactttgagaatagtttccttatgtttaatggggtct 5714046  T
Q  104 cacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 201  Q
    |||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5714045 cacaattaagttatacttaatgttccattaaatgggctaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 5713948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 178; E-Value: 1e-95
Query Start/End: Original strand, 4 - 201
Target Start/End: Original strand, 10621343 - 10621540
Alignment:
Q  4 tacctacataatagtctctatgctttaatgatatcccacttctcaacaaaacttgactacggatactttgagaatagtttccttatgtttaatggggtct 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| ||||||||||||||||||||||||||||||||||| |||    
T  10621343 tacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatactttgagaatagtttccttatgtttaatgggctct 10621442  T
Q  104 cacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 201  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10621443 cacaattaagttatacttaatgttccattaaacggactaactattccagggactttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 10621540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 174; E-Value: 3e-93
Query Start/End: Original strand, 4 - 201
Target Start/End: Original strand, 10628422 - 10628619
Alignment:
Q  4 tacctacataatagtctctatgctttaatgatatcccacttctcaacaaaacttgactacggatactttgagaatagtttccttatgtttaatggggtct 103  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| ||| ||||||||| ||||||||||||||||||||||||||||||||||| |||    
T  10628422 tacctacataatagtctctatgctttaataatatcccacttctcaataaagcttgactacagatactttgagaatagtttccttatgtttaatgggctct 10628521  T
Q  104 cacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 201  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10628522 cacaattaagttatacttaatgttccattaaacggactaactattccagggactttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 10628619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 169; E-Value: 3e-90
Query Start/End: Original strand, 4 - 199
Target Start/End: Complemental strand, 18269270 - 18269070
Alignment:
Q  4 tacctacataatagtctctatgctttaatgatatcccacttctcaacaaaacttgactacggatactttgagaatagtttccttatgtttaatggggtct 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  18269270 tacctacataatagtctctatgctttaatgatatcccacttctcatcaaagcttgactacggatactttgagaatagtttccttatgtttaacggggtct 18269171  T
Q  104 cacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaac-----aaaatcaataaagaaatgcct 198  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     |||||||||||||||||||||    
T  18269170 cacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaacaaaatcaataaagaaatgcct 18269071  T
Q  199 t 199  Q
    |    
T  18269070 t 18269070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 168; E-Value: 1e-89
Query Start/End: Original strand, 4 - 199
Target Start/End: Original strand, 28393144 - 28393339
Alignment:
Q  4 tacctacataatagtctctatgctttaatgatatcccacttctcaacaaaacttgactacggatactttgagaatagtttccttatgtttaatggggtct 103  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  28393144 tacccacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatactttaagaatagtttccttatgtttaatggggtct 28393243  T
Q  104 cacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcctt 199  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  28393244 cacaattaagttatacttaatgttccattaaacggactaactattttagggactttattattttgaaacaaatcaaaatcaataaagaaatgcctt 28393339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 4 - 199
Target Start/End: Original strand, 4426614 - 4426808
Alignment:
Q  4 tacctacataatagtctctatgctttaatgatatcccacttctcaacaaaacttgactacggatactttgagaatagtttccttatgtttaatggggtct 103  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| ||||||||| |||||||||||| |||||||    
T  4426614 tacccacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttaagaatagtt-ccttatgtttaacggggtct 4426712  T
Q  104 cacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcctt 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  4426713 cacaattaagttatacttaatgttccattaaacggactaactattctaaggactttattattttgaaacaaaacaaaatcaataaagaaatgcctt 4426808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 158; E-Value: 9e-84
Query Start/End: Original strand, 4 - 189
Target Start/End: Complemental strand, 8845400 - 8845215
Alignment:
Q  4 tacctacataatagtctctatgctttaatgatatcccacttctcaacaaaacttgactacggatactttgagaatagtttccttatgtttaatggggtct 103  Q
    |||| ||||||||||||||||||||||||||||||| ||||||||| ||| |||||||||||||||||| |||||||||||||||||||||| ||| |||    
T  8845400 tacccacataatagtctctatgctttaatgatatccgacttctcaataaagcttgactacggatactttaagaatagtttccttatgtttaacgggatct 8845301  T
Q  104 cacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaa 189  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8845300 cacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaa 8845215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 158; E-Value: 9e-84
Query Start/End: Original strand, 4 - 189
Target Start/End: Complemental strand, 8858364 - 8858179
Alignment:
Q  4 tacctacataatagtctctatgctttaatgatatcccacttctcaacaaaacttgactacggatactttgagaatagtttccttatgtttaatggggtct 103  Q
    |||| ||||||||||||||||||||||||||||||| ||||||||| ||| |||||||||||||||||| |||||||||||||||||||||| ||| |||    
T  8858364 tacccacataatagtctctatgctttaatgatatccgacttctcaataaagcttgactacggatactttaagaatagtttccttatgtttaacgggatct 8858265  T
Q  104 cacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaa 189  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8858264 cacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaa 8858179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 313 - 487
Target Start/End: Complemental strand, 22339664 - 22339490
Alignment:
Q  313 gtatgaacttgcatcaaaatggtgataacacttaagatgtattaccattttagcttgacgtacacatgttttgatctcgattttatagatccttgcaaag 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||    
T  22339664 gtatgaacttgcatcaaaatggtgataacacttaagatgtattaccattttagctcgatttacacatgttttgatctcgattttatagatccttgcaaag 22339565  T
Q  413 ttatgctgattttgtgtgtctatttgatgaaaaagggcgnnnnnnnggaagaaaatacaaatcccaacttgtctt 487  Q
    ||||||||||||||| ||||||||||||||||||| |||       |||||||||||||||||||| ||||||||    
T  22339564 ttatgctgattttgtatgtctatttgatgaaaaagtgcgaaaaaaaggaagaaaatacaaatcccagcttgtctt 22339490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 86 - 201
Target Start/End: Complemental strand, 12357251 - 12357136
Alignment:
Q  86 ttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaa 185  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12357251 ttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaa 12357152  T
Q  186 taaagaaatgccttgt 201  Q
    ||||||||||||||||    
T  12357151 taaagaaatgccttgt 12357136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 4 - 193
Target Start/End: Complemental strand, 20311489 - 20311299
Alignment:
Q  4 tacctacataatagtctctatgctttaatgatatcccacttctcaacaaaacttgactacggatactttgagaatagtttccttatgtttaatggggtct 103  Q
    |||| ||| |||||||||||||||||||||||||| |||||| ||| ||| |||||| ||  ||||||| | || ||| |||||||||||||||||||||    
T  20311489 tacccacaaaatagtctctatgctttaatgatatctcacttcacaataaagcttgacaacaaatactttaaaaacagtgtccttatgtttaatggggtct 20311390  T
Q  104 cacaattaagttata-cttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 193  Q
    ||||||||||||||| ||||||| |||||| |||  | |||||||| || | ||||||||||||| |||||||||||||||||||||||||    
T  20311389 cacaattaagttataccttaatgctccattgaacatattaactattataagtactttattattttaaaacaaaacaaaatcaataaagaaa 20311299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 515 - 614
Target Start/End: Complemental strand, 9650650 - 9650550
Alignment:
Q  515 gagtttggtgaatt-gtacacttgatgatatttgatgaatatgtgaagatgtgtacttgttgatgtttgttattaatggtgatacttgtacatttgatga 613  Q
    |||||||||||||| ||||||||| ||||||||| ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||  ||||||||    
T  9650650 gagtttggtgaatttgtacacttggtgatatttggtgaatatgtgaagatgtgtccttgttgatgtttgtttttaatggtgatacttgtatgtttgatga 9650551  T
Q  614 t 614  Q
    |    
T  9650550 t 9650550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 8 - 199
Target Start/End: Complemental strand, 5616408 - 5616215
Alignment:
Q  8 tacataatagtctctatgctttaatgatatcccacttctcaacaaaac--ttgactacggatactttgagaatagtttccttatgtttaatggggtctca 105  Q
    |||||||||||||| |||||||| | |||||||| |||  || |||||  ||||| ||||||||||| |||||| | ||||   |||||| ||| |||||    
T  5616408 tacataatagtctcaatgctttattaatatcccaattcataataaaacctttgacaacggatactttaagaataatgtcctctagtttaacgggatctca 5616309  T
Q  106 caattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcctt 199  Q
      ||| ||| | |||||||||||||  |||  |||||| |||| |||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  5616308 tgatttagtcagacttaatgttccaagaaatagactaattattttaggaactttattattttgaaacaaaacaaaatgaataaagaaatgcctt 5616215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 9 - 195
Target Start/End: Original strand, 5668140 - 5668327
Alignment:
Q  9 acataatagtctctatgctttaatgatatcccacttctcaacaaaacttgactacggata--ctttgagaatagtttccttatgtttaatggggtctcac 106  Q
    ||||||||||||||||| ||||||| |||| |  ||| ||| ||| |||||||||  |||  |||| |||||| | |||||   ||||||||| ||||||    
T  5668140 acataatagtctctatgatttaatgttatctcttttcacaataaagcttgactacaaatatactttaagaataatgtcctttcatttaatggg-tctcac 5668238  T
Q  107 aattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatg 195  Q
     ||||| | | |||||||| |||||||||  |||||| |||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  5668239 gattaaatcacacttaatgctccattaaatagactaattattctagagactttattattttgaaacaaaacaaaatcaacaaagaaatg 5668327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 4 - 195
Target Start/End: Original strand, 10677565 - 10677753
Alignment:
Q  4 tacctacataatagtctctatgctttaatgatatcccacttctcaacaaaacttgactacggatactttgagaatagtttccttatgtttaatggggtct 103  Q
    |||| |||||||||||| ||| |||||||| |||| || ||| | |  || |||||||||||||||||| |||||| | || ||  |||||||||| |||    
T  10677565 tacccacataatagtctatatactttaatgttatctcatttcacta--aagcttgactacggatactttaagaataatatcatttcgtttaatggg-tct 10677661  T
Q  104 cacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatg 195  Q
    | | ||||||| |||||||||| ||||||| || |||||| |||| ||||| ||||||| | ||||||||||| |||||||||||| |||||    
T  10677662 cgcgattaagtcatacttaatgctccattatacagactaattattttaggggctttattttattgaaacaaaagaaaatcaataaaaaaatg 10677753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 4 - 195
Target Start/End: Original strand, 10891205 - 10891393
Alignment:
Q  4 tacctacataatagtctctatgctttaatgatatcccacttctcaacaaaacttgactacggatactttgagaatagtttccttatgtttaatggggtct 103  Q
    |||| |||||||||||| ||| |||||||| |||| || ||| | |  || |||||||||||||||||| |||||| | || ||  |||||||||| |||    
T  10891205 tacccacataatagtctatatactttaatgttatctcatttcacta--aagcttgactacggatactttaagaataatatcatttcgtttaatggg-tct 10891301  T
Q  104 cacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatg 195  Q
    | | ||||||| |||||||||| ||||||| || |||||| |||| ||||| ||||||| | ||||||||||| |||||||||||| |||||    
T  10891302 cgcgattaagtcatacttaatgctccattatacagactaattattttaggggctttattttattgaaacaaaagaaaatcaataaaaaaatg 10891393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 108 - 195
Target Start/End: Complemental strand, 35223663 - 35223576
Alignment:
Q  108 attaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatg 195  Q
    ||||||| | |||||||| |||||||||| |||||| ||||||||||||||||||||||| ||||||||||||||||| |||||||||    
T  35223663 attaagtcacacttaatgctccattaaacagactaattattctagggactttattattttaaaacaaaacaaaatcaacaaagaaatg 35223576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 237 - 294
Target Start/End: Complemental strand, 5713912 - 5713855
Alignment:
Q  237 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 294  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5713912 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 5713855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 237 - 294
Target Start/End: Complemental strand, 26963604 - 26963547
Alignment:
Q  237 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 294  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26963604 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 26963547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 237 - 294
Target Start/End: Complemental strand, 26970427 - 26970370
Alignment:
Q  237 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 294  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26970427 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 26970370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 237 - 293
Target Start/End: Original strand, 19927003 - 19927059
Alignment:
Q  237 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 293  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19927003 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 19927059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 237 - 294
Target Start/End: Original strand, 10621576 - 10621633
Alignment:
Q  237 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 294  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  10621576 catgatacaaagccaaaaccaatcaatatagattggctattagggcttattccaacaa 10621633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 237 - 293
Target Start/End: Complemental strand, 5707284 - 5707228
Alignment:
Q  237 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 293  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  5707284 catgatacaaagccaaacacaatcaatatagattggctattagggcttattccaaca 5707228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 237 - 293
Target Start/End: Complemental strand, 12357100 - 12357044
Alignment:
Q  237 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 293  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  12357100 catgatacaaagccaaatccaatcaatatagattggctattagggcttattccaaca 12357044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 237 - 291
Target Start/End: Complemental strand, 868561 - 868507
Alignment:
Q  237 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaa 291  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  868561 catgatacaaagccaaacccaatcaatatagattggctattagggtttattccaa 868507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 237 - 293
Target Start/End: Original strand, 10628655 - 10628711
Alignment:
Q  237 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 293  Q
    |||||||||||| |||| |||||||||||||||||||||||||||||||||||||||    
T  10628655 catgatacaaagtcaaaaccaatcaatatagattggctattagggcttattccaaca 10628711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 237 - 293
Target Start/End: Original strand, 17142372 - 17142428
Alignment:
Q  237 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 293  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  17142372 catgatacaaagtcaaacccaatcaatatagattggctattagggctttttccaaca 17142428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 237 - 293
Target Start/End: Complemental strand, 55612650 - 55612594
Alignment:
Q  237 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 293  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||    
T  55612650 catgatacaaagccaaacccaatcaatatagattggttattagggcttattctaaca 55612594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 239 - 293
Target Start/End: Original strand, 28393380 - 28393434
Alignment:
Q  239 tgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 293  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| |||||||    
T  28393380 tgatacaaagtcaaacccaatcaatatagattggctattagggcttactccaaca 28393434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 359 - 437
Target Start/End: Complemental strand, 50882114 - 50882036
Alignment:
Q  359 attttagcttgacgtacacatgttttgatctcgattttatagatccttgcaaagttatgctgattttgtgtgtctattt 437  Q
    ||||||||| ||| || |||||||||||||||||||||||||||  |||||| ||||||||| | ||||||||||||||    
T  50882114 attttagctcgacttatacatgttttgatctcgattttatagatttttgcaatgttatgctggtattgtgtgtctattt 50882036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 237 - 294
Target Start/End: Complemental strand, 18269032 - 18268975
Alignment:
Q  237 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 294  Q
    ||||||||||||||||||||| |||| |||||||||||||| ||||||||||||||||    
T  18269032 catgatacaaagccaaacccattcaacatagattggctatttgggcttattccaacaa 18268975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 237 - 293
Target Start/End: Original strand, 4426847 - 4426903
Alignment:
Q  237 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 293  Q
    ||||||||| |||||||||||||||||||||||||||||||||| |||| |||||||    
T  4426847 catgatacagagccaaacccaatcaatatagattggctattaggacttactccaaca 4426903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 359 - 437
Target Start/End: Original strand, 16635416 - 16635494
Alignment:
Q  359 attttagcttgacgtacacatgttttgatctcgattttatagatccttgcaaagttatgctgattttgtgtgtctattt 437  Q
    ||||||||| ||| ||||||| ||||||||||||||||||||||  |||||| ||||||||| | ||| ||||||||||    
T  16635416 attttagctcgacttacacattttttgatctcgattttatagatttttgcaatgttatgctggtattgcgtgtctattt 16635494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 85 - 152
Target Start/End: Original strand, 39074278 - 39074346
Alignment:
Q  85 cttatgtttaatggggtctcacaattaagttatacttaatgttcca-ttaaacggactaactattctag 152  Q
    |||||||||||||||||||||  ||||||| ||||||||||||| | ||||||||||||| ||||||||    
T  39074278 cttatgtttaatggggtctcatgattaagtcatacttaatgttcaatttaaacggactaattattctag 39074346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 519 - 614
Target Start/End: Complemental strand, 16569878 - 16569783
Alignment:
Q  519 ttggtgaattgtacacttgatgatatttgatgaatatgtgaagatgtgtacttgttgatgtttgttattaatggtgatacttgtacatttgatgat 614  Q
    ||||||||||||  ||||| ||| ||||| |||| || ||||||||| |||||| |||||| |||||||  |||||||| ||||||||||| ||||    
T  16569878 ttggtgaattgtgtacttggtgaaatttggtgaacatatgaagatgtatacttgatgatgtgtgttatttttggtgatatttgtacatttggtgat 16569783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 237 - 286
Target Start/End: Complemental strand, 55992729 - 55992680
Alignment:
Q  237 catgatacaaagccaaacccaatcaatatagattggctattagggcttat 286  Q
    |||||||||||| ||||||||||||||| | |||||||||||||||||||    
T  55992729 catgatacaaagtcaaacccaatcaatacaaattggctattagggcttat 55992680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 237 - 278
Target Start/End: Original strand, 5668371 - 5668412
Alignment:
Q  237 catgatacaaagccaaacccaatcaatatagattggctatta 278  Q
    ||||||||||| |||||| |||||||||||||||||||||||    
T  5668371 catgatacaaaaccaaacacaatcaatatagattggctatta 5668412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 237 - 285
Target Start/End: Complemental strand, 8845166 - 8845118
Alignment:
Q  237 catgatacaaagccaaacccaatcaatatagattggctattagggctta 285  Q
    |||||||||||| ||||| ||||||| ||||||||||||||||| ||||    
T  8845166 catgatacaaagtcaaactcaatcaacatagattggctattaggactta 8845118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 237 - 285
Target Start/End: Complemental strand, 8858130 - 8858082
Alignment:
Q  237 catgatacaaagccaaacccaatcaatatagattggctattagggctta 285  Q
    |||||||||||| ||||| ||||||| ||||||||||||||||| ||||    
T  8858130 catgatacaaagtcaaactcaatcaacatagattggctattaggactta 8858082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 237 - 277
Target Start/End: Complemental strand, 18262176 - 18262136
Alignment:
Q  237 catgatacaaagccaaacccaatcaatatagattggctatt 277  Q
    ||||||||||||||||||||| |||| ||||||||||||||    
T  18262176 catgatacaaagccaaacccattcaacatagattggctatt 18262136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 92 - 175
Target Start/End: Original strand, 21454235 - 21454319
Alignment:
Q  92 ttaatggggtctcacaattaagttatactt-aatgttccattaaacggactaactattctagggactttattattttgaaacaaa 175  Q
    ||||||||||||||  ||||||| | | || ||||||||||||| |  ||||||||||||| | ||||||||| |||||||||||    
T  21454235 ttaatggggtctcaatattaagtcacattttaatgttccattaatcaaactaactattctaagaactttattactttgaaacaaa 21454319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 92 - 151
Target Start/End: Original strand, 11161913 - 11161972
Alignment:
Q  92 ttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattcta 151  Q
    ||||||| ||||||||||||||| | ||||  ||||||||||||| || |||||||||||    
T  11161913 ttaatggagtctcacaattaagtcacactttgtgttccattaaactgattaactattcta 11161972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 555 - 602
Target Start/End: Original strand, 12452298 - 12452345
Alignment:
Q  555 tgtgaagatgtgtacttgttgatgtttgttattaatggtgatacttgt 602  Q
    |||||||||||||||| | ||||||||||||||  |||||||||||||    
T  12452298 tgtgaagatgtgtactcgatgatgtttgttatttttggtgatacttgt 12452345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 237 - 291
Target Start/End: Complemental strand, 20311261 - 20311207
Alignment:
Q  237 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaa 291  Q
    ||||||||||||||||| ||||| |||| |||||||||||||  ||||| |||||    
T  20311261 catgatacaaagccaaatccaatgaatacagattggctattacagcttactccaa 20311207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 237 - 285
Target Start/End: Complemental strand, 24700006 - 24699958
Alignment:
Q  237 catgatacaaagccaaacccaatcaatatagattggctattagggctta 285  Q
    ||||||||||| |||||  ||||||||||||||||| |||| |||||||    
T  24700006 catgatacaaaaccaaattcaatcaatatagattggttattcgggctta 24699958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 190; Significance: 1e-103; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 4 - 201
Target Start/End: Complemental strand, 18252227 - 18252030
Alignment:
Q  4 tacctacataatagtctctatgctttaatgatatcccacttctcaacaaaacttgactacggatactttgagaatagtttccttatgtttaatggggtct 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  18252227 tacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgtttaatggggtct 18252128  T
Q  104 cacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 201  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18252127 cacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 18252030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 7 - 201
Target Start/End: Original strand, 18532527 - 18532721
Alignment:
Q  7 ctacataatagtctctatgctttaatgatatcccacttctcaacaaaacttgactacggatactttgagaatagtttccttatgtttaatggggtctcac 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18532527 ctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatggggtctcac 18532626  T
Q  107 aattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 201  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18532627 aattaagttatacttaatgttccattaaacgaactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 18532721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 178; E-Value: 1e-95
Query Start/End: Original strand, 4 - 201
Target Start/End: Original strand, 27131419 - 27131616
Alignment:
Q  4 tacctacataatagtctctatgctttaatgatatcccacttctcaacaaaacttgactacggatactttgagaatagtttccttatgtttaatggggtct 103  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| ||| |||||||||  ||||||||||||||||||||||||||||||||||||||    
T  27131419 tacctacataatagtctttatgctttaatgatatcccacttctcaataaagcttgactacaaatactttgagaatagtttccttatgtttaatggggtct 27131518  T
Q  104 cacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 201  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27131519 cacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 27131616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 4 - 199
Target Start/End: Original strand, 21171243 - 21171438
Alignment:
Q  4 tacctacataatagtctctatgctttaatgatatcccacttctcaacaaaacttgactacggatactttgagaatagtttccttatgtttaatggggtct 103  Q
    |||| |||||||||||| |||||||||||||||||||||||||||| ||| |||||||||||||||||| ||||||||||||||||||| || |||||||    
T  21171243 tacccacataatagtctttatgctttaatgatatcccacttctcaataaagcttgactacggatactttaagaatagtttccttatgttcaacggggtct 21171342  T
Q  104 cacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcctt 199  Q
    ||||||||||||||| |||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  21171343 cacaattaagttatatttaatgttccatgaaacggactaactattctaaggactttattattttgaaacaaaacaaaatcaataaagaaatgcctt 21171438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 4 - 199
Target Start/End: Original strand, 27310587 - 27310782
Alignment:
Q  4 tacctacataatagtctctatgctttaatgatatcccacttctcaacaaaacttgactacggatactttgagaatagtttccttatgtttaatggggtct 103  Q
    |||| ||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||| |||||||| ||||||||||||||||||| || | |||||    
T  27310587 tacccacataatagtctctatgctttaatgatattccacttctcaataaagcttgactactgatactttaagaatagtttccttatgttcaacgtggtct 27310686  T
Q  104 cacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcctt 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  27310687 cacaattaagttatacttaatgttccattaaacggactaactattctaaggactttattattttgaaacaaaacaaaatcaataaagaaatgcctt 27310782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 152; E-Value: 4e-80
Query Start/End: Original strand, 4 - 199
Target Start/End: Original strand, 16359045 - 16359240
Alignment:
Q  4 tacctacataatagtctctatgctttaatgatatcccacttctcaacaaaacttgactacggatactttgagaatagtttccttatgtttaatggggtct 103  Q
    |||| ||||||||||||||||||||||||||||| ||| ||||||| ||| |||||||| || |||||| |||||||||||||||||||||| |||||||    
T  16359045 tacccacataatagtctctatgctttaatgatattccatttctcaataaagcttgactagggttactttaagaatagtttccttatgtttaacggggtct 16359144  T
Q  104 cacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcctt 199  Q
    |||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16359145 cacaattaagttattcttaatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcctt 16359240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 135; E-Value: 5e-70
Query Start/End: Original strand, 9 - 195
Target Start/End: Original strand, 36816648 - 36816834
Alignment:
Q  9 acataatagtctctatgctttaatgatatcccacttctcaacaaaacttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaa 108  Q
    ||||||||||||||||||||||||| ||||||||||||||| ||| |||||||| ||||||||| |||||| | ||||||||||||| || |||||||||    
T  36816648 acataatagtctctatgctttaatggtatcccacttctcaataaagcttgactatggatactttaagaataatgtccttatgtttaacggagtctcacaa 36816747  T
Q  109 ttaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatg 195  Q
    |||| ||||||||||||||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  36816748 ttaatttatacttaatgttccattaaacagacgaactattctagggacttcattattttgaaacaaaacaaaatcaataaagaaatg 36816834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 12 - 201
Target Start/End: Original strand, 3855937 - 3856126
Alignment:
Q  12 taatagtctctatgctttaatgatatcccacttctcaacaaaacttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaatta 111  Q
    |||||||||| |||||||||| |||||||||||| ||| |||  ||||||||  ||| ||| |||||| | |||||||||||||||||||||||||||||    
T  3855937 taatagtctccatgctttaataatatcccacttcacaataaagtttgactacaaatattttaagaataatgtccttatgtttaatggggtctcacaatta 3856036  T
Q  112 agttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 201  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| || |||||||||||||||    
T  3856037 agttatacttaatgttccattaaacgggctaactattctagggactttgttattttgaaacaaaacaaaataaacaaagaaatgccttgt 3856126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 9 - 201
Target Start/End: Original strand, 22657236 - 22657429
Alignment:
Q  9 acataatagtctctatgctttaatgatatcccacttctcaacaaaacttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaa 108  Q
    |||| ||||||||||||||||||||||||| || |||  || ||| ||||||||  || ||||| ||||| || ||||||||||||| ||||||||||||    
T  22657236 acatgatagtctctatgctttaatgatatctcatttcagaataaagcttgactagagacactttaagaattgtgtccttatgtttaaaggggtctcacaa 22657335  T
Q  109 ttaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaac-aaaatcaataaagaaatgccttgt 201  Q
    |||||||||| ||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||| |||||    
T  22657336 ttaagttatatttaatgttccattaaacagactaactattctaggaactttattattttgaaacaaaacaaaaatcaataaagaaatgtcttgt 22657429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 4 - 195
Target Start/End: Original strand, 27277567 - 27277756
Alignment:
Q  4 tacctacataatagtctctatgctttaatgatatcccacttctcaacaaaacttgactacggatactttgagaatagtttccttatgtttaatggggtct 103  Q
    |||| ||||||||||||||||||||||||| ||||||  ||| ||| ||| | |||||||||||||||| |||||| | || ||  | ||||  || |||    
T  27277567 tacccacataatagtctctatgctttaatgttatcccttttcacaataaagcctgactacggatactttaagaataatgtcatttcggttaaaagg-tct 27277665  T
Q  104 cacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatg 195  Q
    | | ||||||| | ||| |||| ||| ||||| ||||||| |||||||||||| |||||||||||||||||||||||| ||| |||||||||    
T  27277666 cgcgattaagtcacact-aatgctccgttaaatggactaattattctagggacgttattattttgaaacaaaacaaaaacaacaaagaaatg 27277756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 237 - 293
Target Start/End: Complemental strand, 18251992 - 18251936
Alignment:
Q  237 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 293  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18251992 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 18251936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 237 - 293
Target Start/End: Original strand, 18532757 - 18532813
Alignment:
Q  237 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 293  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18532757 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 18532813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 9 - 167
Target Start/End: Original strand, 12006554 - 12006712
Alignment:
Q  9 acataatagtctctatgctttaatgatatcccacttctcaacaaaacttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaa 108  Q
    |||||| | |||||| | ||||||| |||||| |||| ||  ||  |||||||||| ||  ||| | |||| | ||||||||||| |||||||||||| |    
T  12006554 acataacaatctctaagttttaatgttatccctcttcacactaaggcttgactacgaatgttttaataataatgtccttatgtttcatggggtctcacga 12006653  T
Q  109 ttaagttatacttaatgttccattaaacggactaactattctagggactttattatttt 167  Q
    |||||  | ||||||| ||||||||||  ||||||||||||||||||||||||||||||    
T  12006654 ttaaggcacacttaatattccattaaatagactaactattctagggactttattatttt 12006712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 4 - 167
Target Start/End: Original strand, 12014294 - 12014457
Alignment:
Q  4 tacctacataatagtctctatgctttaatgatatcccacttctcaacaaaacttgactacggatactttgagaatagtttccttatgtttaatggggtct 103  Q
    |||| ||||||| |||| || ||||||||  |||||| |||| ||  ||| ||| |||||||||  ||| ||||||   || |||||||||||||| |||    
T  12014294 tacccacataatggtctttacgctttaatcgtatccctcttcacactaaagcttaactacggatgttttaagaataacatcattatgtttaatgggatct 12014393  T
Q  104 cacaattaagttatacttaatgttccattaaacggactaactattctagggactttattatttt 167  Q
     || ||||| ||| ||||||| |||||||||||||||||  |||||||| ||||||||||||||    
T  12014394 aacgattaatttacacttaatattccattaaacggactatgtattctagtgactttattatttt 12014457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 237 - 293
Target Start/End: Original strand, 27310821 - 27310877
Alignment:
Q  237 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 293  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  27310821 catgatacaaagccaaactcaatcaatatagattggctattagggcttactccaaca 27310877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 237 - 293
Target Start/End: Original strand, 16359280 - 16359336
Alignment:
Q  237 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 293  Q
    ||||||||||| || |||||||||||||||||||||||||||||||||| |||||||    
T  16359280 catgatacaaatcctaacccaatcaatatagattggctattagggcttactccaaca 16359336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 4 - 189
Target Start/End: Original strand, 9917928 - 9918106
Alignment:
Q  4 tacctacataatagtctctatgctttaatgatatcccacttctcaacaaaacttgactacggatactttgagaatagtttccttatgtttaatggggtct 103  Q
    |||| ||||| || ||||||||||| |||| ||||||||||  ||| ||| ||| ||||  |||| ||| |||||| | ||||||| ||||||||  |||    
T  9917928 taccgacatagtattctctatgcttcaatgctatcccacttaacaataaagcttaactatagatattttaagaataatgtccttatatttaatgga-tct 9918026  T
Q  104 cacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaa 189  Q
    |   || |||||||||||||||||| |||||||  |||||       || ||||||||||||||| ||||||||||||||||||||    
T  9918027 cgtgatcaagttatacttaatgttcgattaaacaaactaa------aagtgactttattattttgtaacaaaacaaaatcaataaa 9918106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 237 - 294
Target Start/End: Original strand, 21171479 - 21171536
Alignment:
Q  237 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 294  Q
    |||||||||||||||||| ||||| |||||||||||||||||| ||||| ||||||||    
T  21171479 catgatacaaagccaaactcaatccatatagattggctattagagcttactccaacaa 21171536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 373 - 437
Target Start/End: Complemental strand, 7589288 - 7589224
Alignment:
Q  373 tacacatgttttgatctcgattttatagatccttgcaaagttatgctgattttgtgtgtctattt 437  Q
    ||||||| ||||||||||||||||||||||  |||||| ||||||||| | ||||||||||||||    
T  7589288 tacacattttttgatctcgattttatagatttttgcaatgttatgctggtattgtgtgtctattt 7589224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 240 - 294
Target Start/End: Original strand, 36816881 - 36816935
Alignment:
Q  240 gatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 294  Q
    ||||||||||||||||||||||||||||||||  |||||||||||| ||| ||||    
T  36816881 gatacaaagccaaacccaatcaatatagattgaatattagggcttaatccgacaa 36816935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 237 - 294
Target Start/End: Original strand, 3856164 - 3856221
Alignment:
Q  237 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 294  Q
    |||||||||||| ||||||||||||| || |||||||||||||||| || ||||||||    
T  3856164 catgatacaaagtcaaacccaatcaagatggattggctattagggcctactccaacaa 3856221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 241 - 294
Target Start/End: Original strand, 22657469 - 22657522
Alignment:
Q  241 atacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 294  Q
    |||||||||||||| ||||||||||| ||||||||||| |||||| ||||||||    
T  22657469 atacaaagccaaactcaatcaatatatattggctattaaggcttactccaacaa 22657522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 126 - 195
Target Start/End: Original strand, 30720625 - 30720694
Alignment:
Q  126 ttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatg 195  Q
    |||||||||||| ||||| ||||| ||| ||||||||||||| |||||||| |||| ||||||| |||||    
T  30720625 ttccattaaacgaactaattattccaggaactttattattttaaaacaaaataaaaccaataaaaaaatg 30720694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 237 - 293
Target Start/End: Original strand, 27131652 - 27131704
Alignment:
Q  237 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 293  Q
    ||||||||||||||||||||||     ||||||||||||||||||||||||||||||    
T  27131652 catgatacaaagccaaacccaac----atagattggctattagggcttattccaaca 27131704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 335 - 437
Target Start/End: Original strand, 24067860 - 24067962
Alignment:
Q  335 tgataacacttaagatgtattaccattttagcttgacgtacacatgttttgatctcgattttatagatccttgcaaagttatgctgattttgtgtgtcta 434  Q
    ||||||||| ||| ||| |||||  |||||||| ||| ||||||||||||||| | ||||||| ||||  |||||  |||||| || | |||||||||||    
T  24067860 tgataacacgtaaaatgcattacttttttagctcgacttacacatgttttgattttgattttacagatttttgcattgttatgttggtattgtgtgtcta 24067959  T
Q  435 ttt 437  Q
    |||    
T  24067960 ttt 24067962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 94 - 171
Target Start/End: Complemental strand, 3403325 - 3403248
Alignment:
Q  94 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaa 171  Q
    |||| ||||||||| |||||| | ||||||| ||||||||| | ||||||||||| ||  |||||||||| |||||||    
T  3403325 aatgtggtctcacatttaagtcacacttaatattccattaatcagactaactattttatagactttattactttgaaa 3403248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 94 - 171
Target Start/End: Original strand, 3443494 - 3443571
Alignment:
Q  94 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaa 171  Q
    |||| ||||||||| |||||| | ||||||| ||||||||| | ||||||||||| ||  |||||||||| |||||||    
T  3443494 aatgtggtctcacatttaagtcacacttaatattccattaatcagactaactattttatagactttattactttgaaa 3443571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 237 - 293
Target Start/End: Original strand, 27277800 - 27277856
Alignment:
Q  237 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 293  Q
    |||||||||||| |||||  ||| || |||||||||||||||||||||| |||||||    
T  27277800 catgatacaaagtcaaacataattaacatagattggctattagggcttactccaaca 27277856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 186; Significance: 1e-100; HSPs: 2)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 4 - 201
Target Start/End: Complemental strand, 18485 - 18288
Alignment:
Q  4 tacctacataatagtctctatgctttaatgatatcccacttctcaacaaaacttgactacggatactttgagaatagtttccttatgtttaatggggtct 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  18485 tacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatggggtct 18386  T
Q  104 cacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 201  Q
    ||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18385 cacaattaagttatacttaatgttcaattaaatggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 18288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220; HSP #2
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 237 - 293
Target Start/End: Complemental strand, 18252 - 18196
Alignment:
Q  237 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 293  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18252 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 18196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 186; Significance: 1e-100; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 4 - 201
Target Start/End: Complemental strand, 29327981 - 29327784
Alignment:
Q  4 tacctacataatagtctctatgctttaatgatatcccacttctcaacaaaacttgactacggatactttgagaatagtttccttatgtttaatggggtct 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  29327981 tacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgtttaatggggtct 29327882  T
Q  104 cacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 201  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29327881 cacaattaagttatacttaatgttccattaaactgactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 29327784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 182; E-Value: 4e-98
Query Start/End: Original strand, 4 - 201
Target Start/End: Original strand, 11536072 - 11536269
Alignment:
Q  4 tacctacataatagtctctatgctttaatgatatcccacttctcaacaaaacttgactacggatactttgagaatagtttccttatgtttaatggggtct 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  11536072 tacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaataggttccttatgtttaatggggtct 11536171  T
Q  104 cacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 201  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11536172 cacaattaagttgtacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 11536269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 178; E-Value: 1e-95
Query Start/End: Original strand, 4 - 201
Target Start/End: Original strand, 11542990 - 11543187
Alignment:
Q  4 tacctacataatagtctctatgctttaatgatatcccacttctcaacaaaacttgactacggatactttgagaatagtttccttatgtttaatggggtct 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  11542990 tacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaataggttccttatgtttaatggggtct 11543089  T
Q  104 cacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 201  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  11543090 gacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcattgt 11543187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 168; E-Value: 1e-89
Query Start/End: Original strand, 4 - 199
Target Start/End: Complemental strand, 15152640 - 15152445
Alignment:
Q  4 tacctacataatagtctctatgctttaatgatatcccacttctcaacaaaacttgactacggatactttgagaatagtttccttatgtttaatggggtct 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| |||||||||||| ||||||||| |||||||    
T  15152640 tacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttaagaatagtttccgtatgtttaacggggtct 15152541  T
Q  104 cacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcctt 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  15152540 cacaattaagttatacttaatgttccattaaacggactaactattctaggaactttattattttgaaacaaaacaaactcaataaagaaatgcctt 15152445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 160; E-Value: 6e-85
Query Start/End: Original strand, 4 - 199
Target Start/End: Complemental strand, 15148339 - 15148144
Alignment:
Q  4 tacctacataatagtctctatgctttaatgatatcccacttctcaacaaaacttgactacggatactttgagaatagtttccttatgtttaatggggtct 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| |||||||| |||||||||||||||||||||| |||||||    
T  15148339 tacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatactttaagaatagtttccttatgtttaacggggtct 15148240  T
Q  104 cacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcctt 199  Q
    ||||||||||||||||||||||||| || ||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  15148239 cacaattaagttatacttaatgttcaatcaaacggactaactattctaggaactttattattttgaaacaaaacaaactcaataaagaaatgcctt 15148144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 4 - 199
Target Start/End: Complemental strand, 18561204 - 18561009
Alignment:
Q  4 tacctacataatagtctctatgctttaatgatatcccacttctcaacaaaacttgactacggatactttgagaatagtttccttatgtttaatggggtct 103  Q
    |||| |||||||||||||||||||||||||||||||||| |||||| ||| ||||||||| |||||||| ||||||||||||| |||||||| |||||||    
T  18561204 tacccacataatagtctctatgctttaatgatatcccacctctcaataaagcttgactacagatactttaagaatagtttcctaatgtttaacggggtct 18561105  T
Q  104 cacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcctt 199  Q
    |||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18561104 cacagttaagttatacttaatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcctt 18561009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 155; E-Value: 6e-82
Query Start/End: Original strand, 9 - 199
Target Start/End: Complemental strand, 12751018 - 12750828
Alignment:
Q  9 acataatagtctctatgctttaatgatatcccacttctcaacaaaacttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaa 108  Q
    ||||||||||||||||||||||||||||||| ||||||||| ||| |||||||||||||||||| ||||||||||| |||||||||| | ||||||||||    
T  12751018 acataatagtctctatgctttaatgatatccaacttctcaataaagcttgactacggatactttaagaatagtttctttatgtttaacgaggtctcacaa 12750919  T
Q  109 ttaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcctt 199  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  12750918 ttaagttatacttaatgtttcattaaacggactaactattctagggactttattactttgaaacaaaacaaaatcaataaagaaatgcctt 12750828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 140; E-Value: 5e-73
Query Start/End: Original strand, 4 - 195
Target Start/End: Complemental strand, 12738733 - 12738542
Alignment:
Q  4 tacctacataatagtctctatgctttaatgatatcccacttctcaacaaaacttgactacggatactttgagaatagtttccttatgtttaatggggtct 103  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| |||||||| ||||||||||||||||||||||   |||||    
T  12738733 tacccacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatactttaagaatagtttccttatgtttaacaaggtct 12738634  T
Q  104 cacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatg 195  Q
    ||||||||||||||| |||||||| ||||||||  |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  12738633 cacaattaagttataattaatgtttcattaaacaaactaactattctagggactttattattttgaaacaaaataaaatcaataaagaaatg 12738542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 9 - 199
Target Start/End: Original strand, 18257857 - 18258047
Alignment:
Q  9 acataatagtctctatgctttaatgatatcccacttctcaacaaaacttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaa 108  Q
    |||||||||||| ||||| ||| || ||||| ||||  ||| |||||||||||||||||||||| |||||| | ||||| ||||||||||||||||||||    
T  18257857 acataatagtctttatgcattattgttatcctacttaacaaaaaaacttgactacggatactttaagaataatgtccttgtgtttaatggggtctcacaa 18257956  T
Q  109 ttaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcctt 199  Q
    |||||| ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18257957 ttaagtcatacttaatgttccattaaacagactaattattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcctt 18258047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 515 - 606
Target Start/End: Original strand, 14302226 - 14302317
Alignment:
Q  515 gagtttggtgaattgtacacttgatgatatttgatgaatatgtgaagatgtgtacttgttgatgtttgttattaatggtgatacttgtacat 606  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||||| |||||||||| ||||||| ||| |||||||||||||||||||||    
T  14302226 gagtttggtgaattgtacacttggtgatatttggtgaatatgtgaaggtgtgtacttgatgatgttcgttgttaatggtgatacttgtacat 14302317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 13 - 195
Target Start/End: Complemental strand, 13392338 - 13392157
Alignment:
Q  13 aatagtctctatgctttaatgatatcccacttctcaacaaaacttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaa 112  Q
    ||||||||||||| ||||||| ||||||  ||| ||| |||  |||||||  |||||||| |||||| | |||||   ||||||||| |||||| |||||    
T  13392338 aatagtctctatgttttaatgttatcccttttcacaataaagtttgactattgatactttaagaataatgtcctttcatttaatggg-tctcacgattaa 13392240  T
Q  113 gttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatg 195  Q
    || | |||||||| |||||||| | |||||| | ||||||| |||||||||||||||||||||||||| |||| |||||||||    
T  13392239 gtcacacttaatgctccattaagcagactaattgttctaggaactttattattttgaaacaaaacaaagtcaacaaagaaatg 13392157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 237 - 294
Target Start/End: Original strand, 11543223 - 11543280
Alignment:
Q  237 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 294  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  11543223 catgatacaaagccaaaaccaatcaatatagattggctattagggcttattccaacaa 11543280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 237 - 293
Target Start/End: Original strand, 2653275 - 2653331
Alignment:
Q  237 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 293  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  2653275 catgatacaaagccaatcccaatcaatatagattggctattagggcttattccaaca 2653331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 237 - 293
Target Start/End: Complemental strand, 12738499 - 12738443
Alignment:
Q  237 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 293  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  12738499 catgatacaaagccaaacccaatcaatatagattggctattagggcttactccaaca 12738443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 108 - 195
Target Start/End: Complemental strand, 39111905 - 39111819
Alignment:
Q  108 attaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatg 195  Q
    |||||||  ||||||||||| |||||||||||||  ||||||||||||||||||| |||||||| |||||||||| ||||||||||||    
T  39111905 attaagtcgtacttaatgtttcattaaacggactcgctattctagggactttatt-ttttgaaataaaacaaaattaataaagaaatg 39111819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 9 - 179
Target Start/End: Complemental strand, 2365086 - 2364917
Alignment:
Q  9 acataatagtctctatgctttaatgatatcccacttctcaacaaaacttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaa 108  Q
    |||| |||||||||||| ||||||| |||| || ||| ||| ||   ||||||||| ||| ||| |||||| | || ||  |||||||||| |||||| |    
T  2365086 acatgatagtctctatgttttaatgttatctcatttcacaataagg-ttgactacgaatattttaagaataatgtcatttagtttaatgggttctcacga 2364988  T
Q  109 ttaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaa 179  Q
    |||||  | |||||||||||||||| |  |||||| |||||||| |||||||||||||||||||| |||||    
T  2364987 ttaagccacacttaatgttccattagaaagactaattattctagagactttattattttgaaacataacaa 2364917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 237 - 294
Target Start/End: Original strand, 11536305 - 11536362
Alignment:
Q  237 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 294  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  11536305 catgatacaaagccaaaaccaatcaatatagagtggctattagggcttattccaacaa 11536362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 237 - 294
Target Start/End: Complemental strand, 12750789 - 12750732
Alignment:
Q  237 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 294  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  12750789 catgatacaaagccaaacccaatcaatatagattagctattagggcttactccaacaa 12750732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 237 - 294
Target Start/End: Complemental strand, 15152406 - 15152349
Alignment:
Q  237 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 294  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||    
T  15152406 catgatacaaaaccaaacccaatcaatatagattggctattagggcttactccaacaa 15152349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 238 - 294
Target Start/End: Complemental strand, 29327745 - 29327689
Alignment:
Q  238 atgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 294  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||    
T  29327745 atgatacaaaaccaaacccaatcaatatagattggctattagggcttactccaacaa 29327689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 9 - 168
Target Start/End: Complemental strand, 7396381 - 7396221
Alignment:
Q  9 acataatagtctctatgctttaatgatatcccacttctcaacaaaacttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaa 108  Q
    ||||||||||||||||||||||||   |||  | ||| ||  ||  |||||||||  ||  ||| |||||| ||| |||||||||||| ||||||||  |    
T  7396381 acataatagtctctatgctttaatatcatcgtatttcacactaaggcttgactacatatgttttaagaataattttcttatgtttaatagggtctcaaga 7396282  T
Q  109 ttaagttatacttaatgttcca-ttaaacggactaactattctagggactttattattttg 168  Q
    |||||| ||||||||||||||| ||||| | |||||||||||||| ||| || ||||||||    
T  7396281 ttaagtcatacttaatgttccatttaaatgaactaactattctagcgacatttttattttg 7396221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 237 - 293
Target Start/End: Complemental strand, 15148105 - 15148049
Alignment:
Q  237 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 293  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||||| |||||||    
T  15148105 catgatacaaaaccaaacccaattaatatagattggctattagggcttactccaaca 15148049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 238 - 294
Target Start/End: Complemental strand, 13392085 - 13392029
Alignment:
Q  238 atgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 294  Q
    ||||||||||| ||||| ||||||||||||||||| |||||||||||| ||||||||    
T  13392085 atgatacaaagtcaaacacaatcaatatagattggatattagggcttactccaacaa 13392029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 84 - 127
Target Start/End: Complemental strand, 3132791 - 3132748
Alignment:
Q  84 ccttatgtttaatggggtctcacaattaagttatacttaatgtt 127  Q
    ||||||||||||||||||||||||||||||||| ||||||||||    
T  3132791 ccttatgtttaatggggtctcacaattaagttacacttaatgtt 3132748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 86 - 151
Target Start/End: Complemental strand, 10234244 - 10234179
Alignment:
Q  86 ttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattcta 151  Q
    |||||||||||||  |||||  ||||||||||| |||||| | |||||||||||||||||||||||    
T  10234244 ttatgtttaatggaatctcatgattaagttatatttaatggttcattaaacggactaactattcta 10234179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 237 - 293
Target Start/End: Original strand, 18258087 - 18258143
Alignment:
Q  237 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 293  Q
    |||||||||| |||||| ||||||||| |||||||||||| |||||||| |||||||    
T  18258087 catgatacaaggccaaaaccaatcaatctagattggctatcagggcttactccaaca 18258143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 169 - 201
Target Start/End: Original strand, 2653207 - 2653239
Alignment:
Q  169 aaacaaaacaaaatcaataaagaaatgccttgt 201  Q
    |||||||||||||||||||||||||||||||||    
T  2653207 aaacaaaacaaaatcaataaagaaatgccttgt 2653239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 237 - 293
Target Start/End: Complemental strand, 18560969 - 18560913
Alignment:
Q  237 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 293  Q
    |||||||||||||||| ||||||||| |||||||| || | |||||||| |||||||    
T  18560969 catgatacaaagccaagcccaatcaacatagattgcctttaagggcttactccaaca 18560913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 533 - 614
Target Start/End: Complemental strand, 19381734 - 19381654
Alignment:
Q  533 acttgatgatatttgatgaatatgtgaagatgtgtacttgttgatgtttgttattaatggtgatacttgtacatttgatgat 614  Q
    ||||| ||||||||| |||| || |||||||||||||||| ||||| ||| ||||| |||  ||||| ||| ||||||||||    
T  19381734 acttggtgatatttggtgaacatatgaagatgtgtacttgatgatg-ttgctattattggcaatactcgtatatttgatgat 19381654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 373 - 437
Target Start/End: Original strand, 7157465 - 7157529
Alignment:
Q  373 tacacatgttttgatctcgattttatagatccttgcaaagttatgctgattttgtgtgtctattt 437  Q
    ||||||| ||||||| | ||||||||| ||  |||||| ||||||||| | ||||||||||||||    
T  7157465 tacacattttttgattttgattttataaatttttgcaatgttatgctggtattgtgtgtctattt 7157529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 186; Significance: 1e-100; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 4 - 201
Target Start/End: Original strand, 27381262 - 27381459
Alignment:
Q  4 tacctacataatagtctctatgctttaatgatatcccacttctcaacaaaacttgactacggatactttgagaatagtttccttatgtttaatggggtct 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| |||||||||||||||||    
T  27381262 tacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactatggatactttgagaatagtttccatatgtttaatggggtct 27381361  T
Q  104 cacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 201  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27381362 cacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 27381459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 4 - 201
Target Start/End: Original strand, 27471645 - 27471842
Alignment:
Q  4 tacctacataatagtctctatgctttaatgatatcccacttctcaacaaaacttgactacggatactttgagaatagtttccttatgtttaatggggtct 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| |||||||||||||||||    
T  27471645 tacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactatggatactttgagaatagtttccatatgtttaatggggtct 27471744  T
Q  104 cacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 201  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27471745 cacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 27471842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 184; E-Value: 3e-99
Query Start/End: Original strand, 4 - 199
Target Start/End: Original strand, 17684479 - 17684674
Alignment:
Q  4 tacctacataatagtctctatgctttaatgatatcccacttctcaacaaaacttgactacggatactttgagaatagtttccttatgtttaatggggtct 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  17684479 tacctacataatagtctctatgctttaatgatatcccacttctcatcaaagcttgactacggatactttgagaatagtttccttatgtttaacggggtct 17684578  T
Q  104 cacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcctt 199  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17684579 cacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcctt 17684674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 182; E-Value: 4e-98
Query Start/End: Original strand, 4 - 201
Target Start/End: Complemental strand, 29309087 - 29308890
Alignment:
Q  4 tacctacataatagtctctatgctttaatgatatcccacttctcaacaaaacttgactacggatactttgagaatagtttccttatgtttaatggggtct 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| |||    
T  29309087 tacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgtttaatgggctct 29308988  T
Q  104 cacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 201  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29308987 cacaattaagttatacttaatgttccattaaatggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 29308890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 182; E-Value: 4e-98
Query Start/End: Original strand, 4 - 201
Target Start/End: Complemental strand, 29316047 - 29315850
Alignment:
Q  4 tacctacataatagtctctatgctttaatgatatcccacttctcaacaaaacttgactacggatactttgagaatagtttccttatgtttaatggggtct 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| |||    
T  29316047 tacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgtttaatgggctct 29315948  T
Q  104 cacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 201  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29315947 cacaattaagttatacttaatgttccattaaatggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 29315850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 180; E-Value: 7e-97
Query Start/End: Original strand, 4 - 199
Target Start/End: Original strand, 16566330 - 16566525
Alignment:
Q  4 tacctacataatagtctctatgctttaatgatatcccacttctcaacaaaacttgactacggatactttgagaatagtttccttatgtttaatggggtct 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| |||||||||||||||||||||| |||||||    
T  16566330 tacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttaagaatagtttccttatgtttaacggggtct 16566429  T
Q  104 cacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcctt 199  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16566430 cacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcctt 16566525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 174; E-Value: 3e-93
Query Start/End: Original strand, 4 - 201
Target Start/End: Original strand, 17691450 - 17691647
Alignment:
Q  4 tacctacataatagtctctatgctttaatgatatcccacttctcaacaaaacttgactacggatactttgagaatagtttccttatgtttaatggggtct 103  Q
    ||||||||||||||||| |||||||||||||||||||||||||||  ||| |||||||||||||||||| ||||||||||||||||||||||||||||||    
T  17691450 tacctacataatagtctttatgctttaatgatatcccacttctcactaaagcttgactacggatactttaagaatagtttccttatgtttaatggggtct 17691549  T
Q  104 cacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 201  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  17691550 cacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaagaaaacaaaatcaataaagaaatgccttgt 17691647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 4 - 199
Target Start/End: Original strand, 188987 - 189182
Alignment:
Q  4 tacctacataatagtctctatgctttaatgatatcccacttctcaacaaaacttgactacggatactttgagaatagtttccttatgtttaatggggtct 103  Q
    |||| |||||||||||||||||||||||||||||| |||||||||| ||| |||||||||  ||||||| ||||||||||||||||||||||||||||||    
T  188987 tacccacataatagtctctatgctttaatgatatctcacttctcaataaagcttgactacaaatactttaagaatagtttccttatgtttaatggggtct 189086  T
Q  104 cacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcctt 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  189087 cacaattaagttatacttaatgttccattaaacggactaactattctaaggactttattattttgaaacaaaacaaaatcaataaagaaatgcctt 189182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 4 - 199
Target Start/End: Original strand, 25537169 - 25537364
Alignment:
Q  4 tacctacataatagtctctatgctttaatgatatcccacttctcaacaaaacttgactacggatactttgagaatagtttccttatgtttaatggggtct 103  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| ||| |||||||||| ||||||| |||||||||||||||||||||| |||||||    
T  25537169 tacctacataatagtctttatgctttaatgatatcccacttctcaataaagcttgactacgaatactttaagaatagtttccttatgtttaacggggtct 25537268  T
Q  104 cacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcctt 199  Q
    |||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25537269 cacaataaagttatacttaatgttccattaaacggactaattattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcctt 25537364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 160; E-Value: 6e-85
Query Start/End: Original strand, 4 - 199
Target Start/End: Complemental strand, 11651920 - 11651725
Alignment:
Q  4 tacctacataatagtctctatgctttaatgatatcccacttctcaacaaaacttgactacggatactttgagaatagtttccttatgtttaatggggtct 103  Q
    |||| |||||||||||||||||||||||||||||| |||||||||| ||| ||||||||| |||||||| |||||||||||||||| |||||||||||||    
T  11651920 tacccacataatagtctctatgctttaatgatatctcacttctcaataaagcttgactactgatacttttagaatagtttccttatttttaatggggtct 11651821  T
Q  104 cacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcctt 199  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  11651820 cacaattaagttatacttaatgttccattaaacggactaactattttagggactttattattttgaaacaaatcaaaatcaataaagaaatgcctt 11651725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 11 - 199
Target Start/End: Original strand, 13359286 - 13359474
Alignment:
Q  11 ataatagtctctatgctttaatgatatcccacttctcaacaaaacttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaatt 110  Q
    ||||||||||||| ||||||||| | ||||| ||| ||| |||  ||||||||||||||||| | |||| | |  ||||||||||||| || |||| |||    
T  13359286 ataatagtctctacgctttaatgttgtcccatttcacaataaaggttgactacggatactttaaaaataatgtttttatgtttaatggagtttcacgatt 13359385  T
Q  111 aagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcctt 199  Q
    ||||||||||||||| |||||||| || |||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  13359386 aagttatacttaatgctccattaagcgaactaactattctagggactttattattttgaaacaaaacaaaataaataaataaatgcctt 13359474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 237 - 291
Target Start/End: Original strand, 17691683 - 17691737
Alignment:
Q  237 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaa 291  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17691683 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaa 17691737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 4 - 162
Target Start/End: Original strand, 20553597 - 20553755
Alignment:
Q  4 tacctacataatagtctctatgctttaatgatatcccacttctcaacaaaacttgactacggatactttgagaatagtttccttatgtttaatggggtct 103  Q
    |||| |||||| | ||| |||||||||||  |||| |||||| ||| |||| || ||||||||| |||| |||||| | | ||||| ||||||||| |||    
T  20553597 taccaacataaaaatctttatgctttaattttatctcacttcacaataaaaattcactacggatgctttaagaataatattcttatatttaatgggatct 20553696  T
Q  104 cacaattaagttatacttaatgttccattaaacggactaactattctagggactttatt 162  Q
    ||| |||||||  |||||||| || |||||||||||||| |||| |||| |||||||||    
T  20553697 cacgattaagtcgtacttaatatttcattaaacggactagctatcctagagactttatt 20553755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 237 - 294
Target Start/End: Original strand, 27381495 - 27381552
Alignment:
Q  237 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 294  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27381495 catgaaacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 27381552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 237 - 294
Target Start/End: Original strand, 27471878 - 27471935
Alignment:
Q  237 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 294  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27471878 catgaaacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 27471935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 237 - 294
Target Start/End: Complemental strand, 29308854 - 29308797
Alignment:
Q  237 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 294  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  29308854 catgatacaaagccaaaaccaatcaatatagattggctattagggcttattccaacaa 29308797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 237 - 294
Target Start/End: Complemental strand, 29315814 - 29315757
Alignment:
Q  237 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 294  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  29315814 catgatacaaagccaaaaccaatcaatatagattggctattagggcttattccaacaa 29315757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 237 - 294
Target Start/End: Original strand, 17684712 - 17684769
Alignment:
Q  237 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 294  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  17684712 catgatacaaagccaaacccattcaacatagattggctattagggcttattccaacaa 17684769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 239 - 293
Target Start/End: Complemental strand, 11651684 - 11651630
Alignment:
Q  239 tgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 293  Q
    |||||||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  11651684 tgatacaaagccaaactcaatcaatatagattggctattagggcttactccaaca 11651630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 237 - 294
Target Start/End: Original strand, 25537405 - 25537462
Alignment:
Q  237 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 294  Q
    |||||||||||||||||| || ||||||||||||||||||||||||||| ||||||||    
T  25537405 catgatacaaagccaaactcagtcaatatagattggctattagggcttaatccaacaa 25537462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 9 - 182
Target Start/End: Complemental strand, 8510115 - 8509941
Alignment:
Q  9 acataatagtctctatgctttaatgatatcccacttctcaacaaaacttgactacggatactttgagaatagtttccttatgtttaatgggg-tctcaca 107  Q
    |||||||||||| |||| ||||||| |||| || |||  || ||| ||| |||||  ||||||| | ||||   |||| || |||||||||| ||||| |    
T  8510115 acataatagtctttatgttttaatgctatctcatttcataataaagcttaactacatatactttaataatatcatcctcatatttaatgggggtctcata 8510016  T
Q  108 attaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaat 182  Q
    |||||||  ||| ||||||||||| |||  |||||| |||||||  |||||||||||||| |||||||| |||||    
T  8510015 attaagtcgtacataatgttccatcaaatagactaattattctatagactttattattttaaaacaaaataaaat 8509941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 178
Target Start/End: Complemental strand, 27925946 - 27925772
Alignment:
Q  9 acataatagtctctatgctttaatgatatcccacttctcaacaaaacttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaa 108  Q
    |||||||||||| | ||||| |||| ||| |||||||  || |||  |||||||  |||||||| |||||| ||| |||  ||||||||| ||||||| |    
T  27925946 acataatagtctttgtgcttcaatgctataccacttccaaataaagtttgactagagatactttaagaataattttctttagtttaatggagtctcacga 27925847  T
Q  109 ttaagttatac--ttaat---gttccattaaacggactaactattctagggactttattattttgaaacaaaaca 178  Q
    |||||| | ||  |||||   ||||| ||||||  ||||  ||||||| ||||||||||||||||||||||||||    
T  27925846 ttaagtcacacacttaattatgttccgttaaacatactagttattctaaggactttattattttgaaacaaaaca 27925772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 139 - 194
Target Start/End: Original strand, 31258065 - 31258120
Alignment:
Q  139 actaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaat 194  Q
    ||||| |||| ||| |||||||||||||||||||||||||||| ||||||||||||    
T  31258065 actaattattttagagactttattattttgaaacaaaacaaaagcaataaagaaat 31258120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 237 - 294
Target Start/End: Original strand, 13359512 - 13359569
Alignment:
Q  237 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 294  Q
    |||||||||||| |||||||||| |||||||||||||||||||| |||| ||| ||||    
T  13359512 catgatacaaagtcaaacccaatgaatatagattggctattaggacttactcccacaa 13359569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 237 - 285
Target Start/End: Original strand, 16566563 - 16566611
Alignment:
Q  237 catgatacaaagccaaacccaatcaatatagattggctattagggctta 285  Q
    |||||||||||| ||||| ||||||| ||||||||||||||||||||||    
T  16566563 catgatacaaagtcaaactcaatcaacatagattggctattagggctta 16566611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 55 - 163
Target Start/End: Original strand, 17850555 - 17850663
Alignment:
Q  55 cttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggg 154  Q
    |||||||| ||||| ||| |||||||| ||||| | |||||| || | ||||||||||||  ||| ||||||||||  ||||  |||| ||||| |||||    
T  17850555 cttgactatggataatttaagaatagtgtccttgtttttaattggatatcacaattaagtcttacataatgttccaacaaacaaactagctattataggg 17850654  T
Q  155 actttatta 163  Q
    |||||||||    
T  17850655 actttatta 17850663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 237 - 293
Target Start/End: Original strand, 189221 - 189280
Alignment:
Q  237 catgatacaaagccaaacccaatcaata---tagattggctattagggcttattccaaca 293  Q
    ||||||||||||||||||||||||||||   |||||||  |||||||||||| |||||||    
T  189221 catgatacaaagccaaacccaatcaatatactagattgattattagggcttactccaaca 189280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 237 - 279
Target Start/End: Original strand, 16394484 - 16394526
Alignment:
Q  237 catgatacaaagccaaacccaatcaatatagattggctattag 279  Q
    |||||||||||| ||||| |||||||||||||||| |||||||    
T  16394484 catgatacaaagtcaaactcaatcaatatagattgtctattag 16394526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 120 - 185
Target Start/End: Original strand, 22259925 - 22259990
Alignment:
Q  120 ttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaa 185  Q
    ||||||||  |||||| ||||||  |||| |||||| |||||||||||| |||| |||||||||||    
T  22259925 ttaatgttatattaaatggactagttattttagggagtttattattttgcaacataacaaaatcaa 22259990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 185; Significance: 1e-100; HSPs: 16)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 5 - 201
Target Start/End: Original strand, 21330259 - 21330455
Alignment:
Q  5 acctacataatagtctctatgctttaatgatatcccacttctcaacaaaacttgactacggatactttgagaatagtttccttatgtttaatggggtctc 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21330259 acctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgtttaatggggtctc 21330358  T
Q  105 acaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 201  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  21330359 acaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgtcttgt 21330455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 4 - 201
Target Start/End: Complemental strand, 18796703 - 18796506
Alignment:
Q  4 tacctacataatagtctctatgctttaatgatatcccacttctcaacaaaacttgactacggatactttgagaatagtttccttatgtttaatggggtct 103  Q
    |||| ||||||||||||| ||||||||||||||| ||||||| ||| ||| ||||||||| |||| ||| |||||| | |||||||||| || | |||||    
T  18796703 tacccacataatagtctcaatgctttaatgatataccacttcacaataaagcttgactacagataatttaagaataatatccttatgttaaaagaggtct 18796604  T
Q  104 cacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 201  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| || ||| |||| ||||||    
T  18796603 cacaattaagttatacttaatgttccattaaacggactaactattctagggactttgttattttgaaacaaaacaaaataaacaaataaattccttgt 18796506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 4 - 199
Target Start/End: Complemental strand, 18620001 - 18619807
Alignment:
Q  4 tacctacataatagtctctatgctttaatgatatcccacttctcaacaaaacttgactacggatactttgagaatagtttccttatgtttaatggggtct 103  Q
    |||| |||||||||||| |||||||||||  ||||||  ||| ||| |||  ||||| || |||||||| |||||| | ||||| ||||||||||| |||    
T  18620001 tacccacataatagtctatatgctttaatattatcccttttcacaataaagtttgaccacagatactttaagaataatatccttttgtttaatggg-tct 18619903  T
Q  104 cacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcctt 199  Q
    || |||||||| | |||||||| |||||||||| |||||| |||| |||||||||||||||||||||||||||||||||||| |||||||| ||||    
T  18619902 cataattaagtcacacttaatgctccattaaacagactaattattatagggactttattattttgaaacaaaacaaaatcaacaaagaaattcctt 18619807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 56 - 195
Target Start/End: Original strand, 19692598 - 19692737
Alignment:
Q  56 ttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 155  Q
    ||||||| ||||||||| |||||| |||||||  |||||||| | |||||  ||||||| |  |||||||||||||||||| |||||| |||||||||||    
T  19692598 ttgactaaggatactttaagaataatttcctttagtttaatgagatctcatgattaagtcaggcttaatgttccattaaacagactaattattctaggga 19692697  T
Q  156 ctttattattttgaaacaaaacaaaatcaataaagaaatg 195  Q
    ||| ||||||||||||||||||||||||||||||||||||    
T  19692698 cttcattattttgaaacaaaacaaaatcaataaagaaatg 19692737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 9 - 136
Target Start/End: Complemental strand, 20978084 - 20977957
Alignment:
Q  9 acataatagtctctatgctttaatgatatcccacttctcaacaaaacttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaa 108  Q
    |||||||||||||||||||||| ||||||| |||||| ||  ||| |||||||||||||  ||| |||||| ||||||||| ||||||||| |||||  |    
T  20978084 acataatagtctctatgctttagtgatatctcacttcacattaaagcttgactacggatgttttaagaataatttccttatttttaatgggatctcatga 20977985  T
Q  109 ttaagttatacttaatgttccattaaac 136  Q
    |||| |||| ||||||||||||||||||    
T  20977984 ttaaattattcttaatgttccattaaac 20977957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 518 - 614
Target Start/End: Original strand, 23167725 - 23167821
Alignment:
Q  518 tttggtgaattgtacacttgatgatatttgatgaatatgtgaagatgtgtacttgttgatgtttgttattaatggtgatacttgtacatttgatgat 614  Q
    |||||||| ||||||||||| ||||||||| |||||||||||||| ||||||||  ||||||||||| ||| ||||||||||||||| |||||||||    
T  23167725 tttggtgagttgtacacttggtgatatttggtgaatatgtgaagacgtgtactttgtgatgtttgttgttattggtgatacttgtacctttgatgat 23167821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 518 - 614
Target Start/End: Original strand, 23578982 - 23579078
Alignment:
Q  518 tttggtgaattgtacacttgatgatatttgatgaatatgtgaagatgtgtacttgttgatgtttgttattaatggtgatacttgtacatttgatgat 614  Q
    |||||||| ||||||||||| ||||||||| |||||||||||||| ||||||||  ||||||||||| ||| ||||||||||||||| |||||||||    
T  23578982 tttggtgagttgtacacttggtgatatttggtgaatatgtgaagacgtgtactttgtgatgtttgttgttattggtgatacttgtacctttgatgat 23579078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 237 - 293
Target Start/End: Original strand, 21330493 - 21330549
Alignment:
Q  237 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 293  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21330493 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 21330549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 9 - 167
Target Start/End: Complemental strand, 18822275 - 18822115
Alignment:
Q  9 acataatagtctctatgctttaatgatatcccacttctcaacaaaacttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaa 108  Q
    |||||||| ||| | ||||||||||||||||||||||  |  ||| ||||| |||  ||  ||| |||||||| ||||| |||||||||| ||||||| |    
T  18822275 acataataatctatctgctttaatgatatcccacttcaaactaaagcttgattacatatgttttaagaatagtgtccttgtgtttaatggtgtctcacga 18822176  T
Q  109 ttaagttatacttaatgtt-ccatt-aaacggactaactattctagggactttattatttt 167  Q
    |||||  | ||||||| || ||||| ||||| |||||| ||||||  ||||||||||||||    
T  18822175 ttaagccacacttaatttttccatttaaacgaactaacaattctatagactttattatttt 18822115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 4 - 167
Target Start/End: Complemental strand, 36270363 - 36270199
Alignment:
Q  4 tacctacataatagtctctatgctttaatgatatcccacttctcaacaaaacttgactacggatactttgagaatagtttccttatgtttaatggggtct 103  Q
    |||| ||| |||||||| ||| |||||||| |||||| |||| ||  ||| ||||| |||||||  ||| |||||||| || || |||||||||  ||||    
T  36270363 tacccacacaatagtctttatactttaatgttatccctcttcacactaaagcttgattacggatgttttaagaatagtgtcattgtgtttaatgatgtct 36270264  T
Q  104 cacaattaagttatacttaatgttccattaaacgga-ctaactattctagggactttattatttt 167  Q
    ||| ||||||| | ||||||  || |||| ||   | ||||||||||||||||||||||||||||    
T  36270263 cacgattaagtcacacttaacatttcatttaagtaaactaactattctagggactttattatttt 36270199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 359 - 437
Target Start/End: Original strand, 23689061 - 23689139
Alignment:
Q  359 attttagcttgacgtacacatgttttgatctcgattttatagatccttgcaaagttatgctgattttgtgtgtctattt 437  Q
    ||||||||| ||| |||| || ||||||||||||||||||||||  |||||| |||||| || | ||||||||||||||    
T  23689061 attttagctcgacttacatattttttgatctcgattttatagatatttgcaatgttatgatggtattgtgtgtctattt 23689139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 556 - 614
Target Start/End: Complemental strand, 28773114 - 28773056
Alignment:
Q  556 gtgaagatgtgtacttgttgatgtttgttattaatggtgatacttgtacatttgatgat 614  Q
    ||||| |||||||||||||||||||||||||   |||| ||||||||||||||| ||||    
T  28773114 gtgaacatgtgtacttgttgatgtttgttatccttggttatacttgtacatttggtgat 28773056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 237 - 294
Target Start/End: Original strand, 19692773 - 19692830
Alignment:
Q  237 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 294  Q
    ||||||||||| ||||||| ||| |||| ||||||||||||| |||||| ||||||||    
T  19692773 catgatacaaaaccaaacctaataaatacagattggctattaaggcttactccaacaa 19692830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 555 - 614
Target Start/End: Original strand, 34136033 - 34136092
Alignment:
Q  555 tgtgaagatgtgtacttgttgatgtttgttattaatggtgatacttgtacatttgatgat 614  Q
    |||| ||||||||||||||||||||||||||||  ||||| | |||||||| ||| ||||    
T  34136033 tgtggagatgtgtacttgttgatgtttgttatttttggtggtgcttgtacacttggtgat 34136092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 237 - 294
Target Start/End: Complemental strand, 18796470 - 18796411
Alignment:
Q  237 catgatacaaagccaaacccaatcaa--tatagattggctattagggcttattccaacaa 294  Q
    |||||||||||||||||| |||||||  ||||||||  || |||||||||| ||||||||    
T  18796470 catgatacaaagccaaacgcaatcaatatatagattttctgttagggcttaatccaacaa 18796411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 10 - 165
Target Start/End: Original strand, 36802664 - 36802820
Alignment:
Q  10 cataatagtctctatgctttaatgatatcccacttctcaacaaaacttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaat 109  Q
    ||||||| ||| |||||||||||| ||||||||||  ||   || ||||| |||||||  ||| |||||| | || || |||||||||   |||  ||||    
T  36802664 cataataatctatatgctttaatgttatcccactttacactgaatcttgattacggatgttttaagaataatgtcattgtgtttaatgatatcttgcaat 36802763  T
Q  110 taagttatacttaatgttcca-ttaaacggactaactattctagggactttattatt 165  Q
    ||||| | | ||||| ||||| ||||||| | ||||||||| | |||||||||||||    
T  36802764 taagtaacatttaatattccatttaaacgaattaactattcaaaggactttattatt 36802820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390 (Bit Score: 182; Significance: 4e-98; HSPs: 4)
Name: scaffold0390
Description:

Target: scaffold0390; HSP #1
Raw Score: 182; E-Value: 4e-98
Query Start/End: Original strand, 4 - 201
Target Start/End: Original strand, 6944 - 7141
Alignment:
Q  4 tacctacataatagtctctatgctttaatgatatcccacttctcaacaaaacttgactacggatactttgagaatagtttccttatgtttaatggggtct 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| ||||||    
T  6944 tacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgtttaatagggtct 7043  T
Q  104 cacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 201  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7044 cacagttaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 7141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390; HSP #2
Raw Score: 174; E-Value: 3e-93
Query Start/End: Original strand, 4 - 201
Target Start/End: Original strand, 13960 - 14157
Alignment:
Q  4 tacctacataatagtctctatgctttaatgatatcccacttctcaacaaaacttgactacggatactttgagaatagtttccttatgtttaatggggtct 103  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| ||| ||||||||| |||||||||||||||||||||||||||||||||||||||    
T  13960 tacctacataatagtctttatgctttaatgatatcccacttctcaataaagcttgactacagatactttgagaatagtttccttatgtttaatggggtct 14059  T
Q  104 cacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 201  Q
    |||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14060 cacagttaagttatacttaatgttccattaaacggactaactattgtagggactttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 14157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390; HSP #3
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 237 - 294
Target Start/End: Original strand, 7177 - 7234
Alignment:
Q  237 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 294  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||    
T  7177 catgatacaaaaccaaactcaatcaatatagattggctattagggcttattccaacaa 7234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 237 - 293
Target Start/End: Original strand, 14193 - 14249
Alignment:
Q  237 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 293  Q
    ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||    
T  14193 catgatacaaaaccaaactcaatcaatatagattggctattagggcttattccaaca 14249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 182; Significance: 4e-98; HSPs: 21)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 182; E-Value: 4e-98
Query Start/End: Original strand, 4 - 201
Target Start/End: Complemental strand, 21940862 - 21940665
Alignment:
Q  4 tacctacataatagtctctatgctttaatgatatcccacttctcaacaaaacttgactacggatactttgagaatagtttccttatgtttaatggggtct 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  21940862 tacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgtttaatggggtct 21940763  T
Q  104 cacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 201  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||    
T  21940762 cacaattaagttatacttaatgttccattaaacggactaactattctaggaactttattattttgaaacaaaacaaaatcaataaagaaatgcattgt 21940665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 168; E-Value: 1e-89
Query Start/End: Original strand, 4 - 199
Target Start/End: Complemental strand, 28555080 - 28554885
Alignment:
Q  4 tacctacataatagtctctatgctttaatgatatcccacttctcaacaaaacttgactacggatactttgagaatagtttccttatgtttaatggggtct 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  28555080 tacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatacttttagaatagtttcattatgtttaatggggtct 28554981  T
Q  104 cacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcctt 199  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||| | |||||||||||||||| ||||||||||||||||||||||||||    
T  28554980 cacaattaagttatacttaatgttccattaaacggactaactattttaggtattttattattttgaaactaaacaaaatcaataaagaaatgcctt 28554885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 161; E-Value: 2e-85
Query Start/End: Original strand, 11 - 195
Target Start/End: Complemental strand, 6094313 - 6094129
Alignment:
Q  11 ataatagtctctatgctttaatgatatcccacttctcaacaaaacttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaatt 110  Q
    ||||||||||||||||||||||||||||||||||||||| ||| ||||||||| |||||||| | |||||||||||||||||||| ||||||||||||||    
T  6094313 ataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatactttaaaaatagtttccttatgtttaacggggtctcacaatt 6094214  T
Q  111 aagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatg 195  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6094213 aagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatg 6094129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 161; E-Value: 2e-85
Query Start/End: Original strand, 4 - 199
Target Start/End: Complemental strand, 22171684 - 22171491
Alignment:
Q  4 tacctacataatagtctctatgctttaatgatatcccacttctcaacaaaacttgactacggatactttgagaatagtttccttatgtttaatggggtct 103  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||||||||||||||||||||||  |||||||||||||||||    
T  22171684 tacctacataatagtctctatgctttaatgatattccacttctcaataaagcttgactacggatactttgagaatagtttc--tatgtttaatggggtct 22171587  T
Q  104 cacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcctt 199  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||    
T  22171586 cacaattaagttatacttaatgttccattaaacagactaactattctagggactttattattttgaaataaaacaaaatcaataaggaaatgcctt 22171491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 152; E-Value: 4e-80
Query Start/End: Original strand, 4 - 195
Target Start/End: Complemental strand, 24642846 - 24642655
Alignment:
Q  4 tacctacataatagtctctatgctttaatgatatcccacttctcaacaaaacttgactacggatactttgagaatagtttccttatgtttaatggggtct 103  Q
    |||| |||||||||||||||| ||||||||||||| |||||||||| ||| |||||||||| ||||||| |||||||||||||||||||||| |||||||    
T  24642846 tacccacataatagtctctatactttaatgatatctcacttctcaataaagcttgactacgaatactttaagaatagtttccttatgtttaacggggtct 24642747  T
Q  104 cacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatg 195  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  24642746 cacaattaagttatacttaatgttccattaaacggactaacaattctagggactttatgattttgaaacaaaacaaaatcaataaagaaatg 24642655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 68 - 195
Target Start/End: Complemental strand, 24636987 - 24636860
Alignment:
Q  68 actttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattatttt 167  Q
    ||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  24636987 actttaagaatagtttccttatgtttaacggggtctcacaattaagttatacttaatgttccattaaaaggactaactattctagggactttattatttt 24636888  T
Q  168 gaaacaaaacaaaatcaataaagaaatg 195  Q
    |||||||||||||||||| |||||||||    
T  24636887 gaaacaaaacaaaatcaagaaagaaatg 24636860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 515 - 614
Target Start/End: Complemental strand, 23638697 - 23638598
Alignment:
Q  515 gagtttggtgaattgtacacttgatgatatttgatgaatatgtgaagatgtgtacttgttgatgtttgttattaatggtgatacttgtacatttgatgat 614  Q
    ||||||||||||||||||||||  ||| ||| | |||| ||||||||||||||||||| ||||||||||||||  |||||||||||||||||||||||||    
T  23638697 gagtttggtgaattgtacactttgtgaaattcggtgaacatgtgaagatgtgtacttgatgatgtttgttattgttggtgatacttgtacatttgatgat 23638598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 237 - 293
Target Start/End: Complemental strand, 21940629 - 21940573
Alignment:
Q  237 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 293  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  21940629 catgatacaaagccaaaaccaatcaatatagattggctattagggcttattccaaca 21940573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 237 - 293
Target Start/End: Complemental strand, 22070164 - 22070108
Alignment:
Q  237 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 293  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  22070164 catgatacaaaaccaaacccaatcaatatagattggctattagggcttattccaaca 22070108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 237 - 294
Target Start/End: Complemental strand, 22171452 - 22171395
Alignment:
Q  237 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 294  Q
    |||||||||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  22171452 catgatacaaaatcaaacccaatcaatatagattggctattagggcttattccaacaa 22171395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 241 - 294
Target Start/End: Complemental strand, 24642608 - 24642555
Alignment:
Q  241 atacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 294  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  24642608 atacaaagccaaacccaatcaatatagattggctattagggcttactccaacaa 24642555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 237 - 293
Target Start/End: Complemental strand, 6094087 - 6094031
Alignment:
Q  237 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 293  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  6094087 catgatacaaagccaaactcaatcaatatagattggctattagggcttactccaaca 6094031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 237 - 294
Target Start/End: Complemental strand, 28554847 - 28554790
Alignment:
Q  237 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 294  Q
    |||||||||||||||||||||||||| | |||||||||||||||||||| ||||||||    
T  28554847 catgatacaaagccaaacccaatcaacaaagattggctattagggcttactccaacaa 28554790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 10 - 171
Target Start/End: Original strand, 32872857 - 32873019
Alignment:
Q  10 cataatagtctctatgctttaatgatatcccacttctcaacaaaacttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaat 109  Q
    |||||||||||||||||||| ||| ||||||||||| ||| ||| ||| |||||  ||| ||| | | || | ||  | | || |||| | |||||||||    
T  32872857 cataatagtctctatgctttgatgttatcccacttcacaataaatcttaactacaaatattttaatagtattgtcactcttttcaatgagatctcacaat 32872956  T
Q  110 taagttatacttaatgttccat-taaacggactaactattctagggactttattattttgaaa 171  Q
    ||||| ||||||||||||| || |||| |||  ||||||| || |||||||||||||||||||    
T  32872957 taagtcatacttaatgttctatataaatggatgaactattataaggactttattattttgaaa 32873019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 359 - 437
Target Start/End: Original strand, 40755860 - 40755938
Alignment:
Q  359 attttagcttgacgtacacatgttttgatctcgattttatagatccttgcaaagttatgctgattttgtgtgtctattt 437  Q
    ||||||||| ||| ||||||| |||| |||||||||||||||||  |||||| ||||||||| | ||||||||||||||    
T  40755860 attttagctcgacttacacatttttttatctcgattttatagatttttgcaatgttatgctggtattgtgtgtctattt 40755938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 519 - 614
Target Start/End: Original strand, 17624513 - 17624608
Alignment:
Q  519 ttggtgaattgtacacttgatgatatttgatgaatatgtgaagatgtgtacttgttgatgtttgttattaatggtgatacttgtacatttgatgat 614  Q
    ||||||||||||  ||||| ||| ||||| |||| || ||||||||||||||||  |||| ||||||||  |||||||||||||||| ||| ||||    
T  17624513 ttggtgaattgtgtacttggtgaaatttggtgaacatatgaagatgtgtacttgacgatgcttgttattgttggtgatacttgtacacttggtgat 17624608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 130 - 189
Target Start/End: Original strand, 38232512 - 38232570
Alignment:
Q  130 attaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaa 189  Q
    ||||||| ||||||||||||||| || ||||||||||||||| |||||||||||||||||    
T  38232512 attaaacagactaactattctagaga-tttattattttgaaataaaacaaaatcaataaa 38232570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 122 - 180
Target Start/End: Complemental strand, 2375085 - 2375027
Alignment:
Q  122 aatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaa 180  Q
    ||||||||||||||  |||||| |||| |||||| ||||||||||||||||||||||||    
T  2375085 aatgttccattaaattgactaattattatagggagtttattattttgaaacaaaacaaa 2375027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 100 - 163
Target Start/End: Complemental strand, 10920297 - 10920234
Alignment:
Q  100 gtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttatta 163  Q
    ||||||| ||||| | ||||||||||||||||||||| |||||| ||||||||| | |||||||    
T  10920297 gtctcacgattaactcatacttaatgttccattaaacagactaattattctaggaattttatta 10920234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 240 - 294
Target Start/End: Complemental strand, 2375000 - 2374946
Alignment:
Q  240 gatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 294  Q
    |||||||||||||| |||||||||| | |||   |||||||||||||||||||||    
T  2375000 gatacaaagccaaatccaatcaatacatatttattattagggcttattccaacaa 2374946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 256 - 293
Target Start/End: Complemental strand, 24636642 - 24636605
Alignment:
Q  256 caatcaatatagattggctattagggcttattccaaca 293  Q
    ||||||||||||||||||||||| |||||| |||||||    
T  24636642 caatcaatatagattggctattatggcttactccaaca 24636605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0433 (Bit Score: 174; Significance: 3e-93; HSPs: 2)
Name: scaffold0433
Description:

Target: scaffold0433; HSP #1
Raw Score: 174; E-Value: 3e-93
Query Start/End: Original strand, 4 - 201
Target Start/End: Complemental strand, 7304 - 7107
Alignment:
Q  4 tacctacataatagtctctatgctttaatgatatcccacttctcaacaaaacttgactacggatactttgagaatagtttccttatgtttaatggggtct 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  7304 tacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatacttttagaatagtttcattatgtttaatggggtct 7205  T
Q  104 cacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 201  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  7204 cacaattaagttatacttaatgttctattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaataccttgt 7107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0433; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 237 - 294
Target Start/End: Complemental strand, 7071 - 7014
Alignment:
Q  237 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 294  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7071 catgatgcaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 7014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 174; Significance: 3e-93; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 174; E-Value: 3e-93
Query Start/End: Original strand, 4 - 201
Target Start/End: Original strand, 24695476 - 24695673
Alignment:
Q  4 tacctacataatagtctctatgctttaatgatatcccacttctcaacaaaacttgactacggatactttgagaatagtttccttatgtttaatggggtct 103  Q
    ||||||||||||||||||||||||||| ||||||| |||||||||| ||| |||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  24695476 tacctacataatagtctctatgctttattgatatctcacttctcaataaagcttgactacggatacttttagaatagtttcattatgtttaatggggtct 24695575  T
Q  104 cacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 201  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24695576 cacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 24695673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 158; E-Value: 9e-84
Query Start/End: Original strand, 4 - 201
Target Start/End: Original strand, 18569873 - 18570070
Alignment:
Q  4 tacctacataatagtctctatgctttaatgatatcccacttctcaacaaaacttgactacggatactttgagaatagtttccttatgtttaatggggtct 103  Q
    |||| |||||||||||| |||||||||||||||| ||||||||||| ||| |||||||||||||||||| ||| |||||||||||||||||| |||||||    
T  18569873 taccaacataatagtctttatgctttaatgatattccacttctcaataaagcttgactacggatactttaagagtagtttccttatgtttaacggggtct 18569972  T
Q  104 cacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 201  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  18569973 cacaattaagttatacttaatgttcaattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgtcttgt 18570070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 152; E-Value: 4e-80
Query Start/End: Original strand, 4 - 199
Target Start/End: Original strand, 19714508 - 19714703
Alignment:
Q  4 tacctacataatagtctctatgctttaatgatatcccacttctcaacaaaacttgactacggatactttgagaatagtttccttatgtttaatggggtct 103  Q
    |||| ||||||||||||||||||||||||||||||| ||||||||| ||| ||||||| |||||| ||| ||||||| |||||||||||||| |||||||    
T  19714508 tacccacataatagtctctatgctttaatgatatcctacttctcaataaagcttgacttcggatattttaagaatagattccttatgtttaacggggtct 19714607  T
Q  104 cacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcctt 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  19714608 cacaattaagttatacttaatgttccattaaacggactaactattctagggactttattactttgaaataaaacaaaatcaataaagaaatgcctt 19714703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 4 - 195
Target Start/End: Original strand, 19707228 - 19707419
Alignment:
Q  4 tacctacataatagtctctatgctttaatgatatcccacttctcaacaaaacttgactacggatactttgagaatagtttccttatgtttaatggggtct 103  Q
    |||| ||||||||||||||||||||||||||||||| ||||||||| ||| ||||||| |||||| ||| ||||||| |||||||||||||| |||||||    
T  19707228 tacccacataatagtctctatgctttaatgatatcctacttctcaataaagcttgacttcggatattttaagaatagattccttatgtttaacggggtct 19707327  T
Q  104 cacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatg 195  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  19707328 cacaattaagttatacttaatgttccattaaactgactaactattctagggactttattactttgaaataaaacaaaatcaataaagaaatg 19707419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 13 - 196
Target Start/End: Original strand, 27347497 - 27347679
Alignment:
Q  13 aatagtctctatgctttaatgatatcccacttctcaacaaaacttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaa 112  Q
    ||||||||||||||||||||| ||||||  ||| ||| ||| |||||||||  ||||||| |||||| | |||||  |||||||||| |||||| |||||    
T  27347497 aatagtctctatgctttaatgttatcccttttcacaataaagcttgactacatatactttaagaataatgtcctttcgtttaatggg-tctcacgattaa 27347595  T
Q  113 gttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgc 196  Q
    || | |||||||| |||||||||| || ||| ||||||| |||||||||||||||||| |||||||||||||| ||||||||||    
T  27347596 gtcacacttaatgctccattaaacagattaattattctaaggactttattattttgaatcaaaacaaaatcaacaaagaaatgc 27347679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 9 - 195
Target Start/End: Original strand, 22547031 - 22547217
Alignment:
Q  9 acataatagtctctatgctttaatgatatcccacttctcaacaaaacttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaa 108  Q
    ||||||||||||||||  ||||||| |||| |||||| ||| |||  |||||| || ||||||| | |||| | ||| ||| ||||||| | |||||| |    
T  22547031 acataatagtctctatattttaatgttatctcacttcacaataaagtttgactgcgaatactttaaaaataatgtccatatatttaatgagatctcacga 22547130  T
Q  109 ttaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatg 195  Q
    |||||||||||||||||||||||||||| ||||||||||| ||| |  ||||||||||| ||| |||||||||| |||||| |||||    
T  22547131 ttaagttatacttaatgttccattaaaccgactaactattatagcggttttattattttaaaataaaacaaaatgaataaataaatg 22547217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 92 - 201
Target Start/End: Complemental strand, 39538071 - 39537962
Alignment:
Q  92 ttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaaga 191  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| || |||||||||| |||||| |  |||||||||||||||||||||| ||||||    
T  39538071 ttaatgaggtctcacaattaagttatacttaatgttccattaaacgaaccaactattctaaggacttaaccattttgaaacaaaacaaaatcattaaaga 39537972  T
Q  192 aatgccttgt 201  Q
    |||| |||||    
T  39537971 aatggcttgt 39537962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 16 - 197
Target Start/End: Original strand, 17285754 - 17285935
Alignment:
Q  16 agtctctatgctttaatgatatcccacttctcaacaaaacttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagtt 115  Q
    ||||| |||||||||||  ||||||| ||| ||| |||  | ||||| | ||||||| |||||| | || ||  ||||| | |||| |||| |||||||     
T  17285754 agtctatatgctttaatactatcccaattcacaataaagatcgactatgaatactttaagaataatgtcatttagtttactagggtttcacgattaagtc 17285853  T
Q  116 atacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcc 197  Q
    | ||||||||||||||||||| |||||||||||||  |||  |||||||||||||||| ||||||||||||||| |||||||    
T  17285854 acacttaatgttccattaaacagactaactattctctggagattattattttgaaacataacaaaatcaataaataaatgcc 17285935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 237 - 294
Target Start/End: Original strand, 24695709 - 24695766
Alignment:
Q  237 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 294  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24695709 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 24695766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 92 - 195
Target Start/End: Complemental strand, 31886640 - 31886537
Alignment:
Q  92 ttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaaga 191  Q
    ||||||| ||||||| |||||||  ||||| |||||| |||||| | ||||| ||||||| ||||||||||| |||||||||||||||||||| ||||||    
T  31886640 ttaatggagtctcacgattaagtcgtacttgatgttcaattaaatgaactaattattctaaggactttattaatttgaaacaaaacaaaatcactaaaga 31886541  T
Q  192 aatg 195  Q
    ||||    
T  31886540 aatg 31886537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 237 - 293
Target Start/End: Original strand, 19714742 - 19714798
Alignment:
Q  237 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 293  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  19714742 catgatacaaagccaaacccaatcaatatagattggctattagggcttactccaaca 19714798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 16 - 197
Target Start/End: Original strand, 17298907 - 17299088
Alignment:
Q  16 agtctctatgctttaatgatatcccacttctcaacaaaacttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagtt 115  Q
    ||||| |||||||||||  ||||||||||  ||| |||  | ||||| | ||||||| |||||| | || ||  ||||| | |||| |||| |||||||     
T  17298907 agtctatatgctttaatactatcccacttaacaataaagatcgactatgaatactttaagaataatgtcatttagtttactagggtttcacgattaagtc 17299006  T
Q  116 atacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcc 197  Q
      ||||||||||||||||| |||||||||||||||  |||  |||||||||  ||||| ||||||||||||||| |||||||    
T  17299007 gcacttaatgttccattaatcggactaactattctctggatattattatttataaacataacaaaatcaataaataaatgcc 17299088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 237 - 294
Target Start/End: Original strand, 19707462 - 19707519
Alignment:
Q  237 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 294  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||    
T  19707462 catgatacaaagccaaactcaatcaatatagattggctattagggcttactccaacaa 19707519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 237 - 293
Target Start/End: Original strand, 27347722 - 27347778
Alignment:
Q  237 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 293  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  27347722 catgatacaaagccaaacgcaatcaatatagattggctattagggcttactccaaca 27347778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 10 - 135
Target Start/End: Original strand, 18807050 - 18807175
Alignment:
Q  10 cataatagtctctatgctttaatgatatcccacttctcaacaaaacttgactacggatactttgagaatagtttcc-ttatgtttaatggggtctcacaa 108  Q
    ||||||||||||||||||||| || ||||  ||||| ||| ||  ||||||||  |||||||| |||||| | ||| |||| |||||||| ||||||| |    
T  18807050 cataatagtctctatgctttattgttatcttacttcacaataacgcttgactatagatactttaagaataatgtccattat-tttaatggtgtctcacga 18807148  T
Q  109 ttaagttatacttaatgttccattaaa 135  Q
    |||||| | ||||||||||||||||||    
T  18807149 ttaagtcacacttaatgttccattaaa 18807175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 4 - 88
Target Start/End: Complemental strand, 39538785 - 39538701
Alignment:
Q  4 tacctacataatagtctctatgctttaatgatatcccacttctcaacaaaacttgactacggatactttgagaatagtttcctta 88  Q
    |||| ||||||||||||  ||||||||||||||||||||||| ||| ||| ||| |||| ||||| ||| |||||||| ||||||    
T  39538785 tacccacataatagtcttcatgctttaatgatatcccacttcacaataaagcttaactatggatattttaagaatagtgtcctta 39538701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 85 - 175
Target Start/End: Original strand, 33477389 - 33477479
Alignment:
Q  85 cttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaa 175  Q
    |||||| |||||| |||||||| ||||  | | |||||||| |||||||| | | ||||||||| || |||||||||||||||||||||||    
T  33477389 cttatgattaatgaggtctcacgattagatcacacttaatgatccattaatcagcctaactattgtaaggactttattattttgaaacaaa 33477479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 237 - 294
Target Start/End: Original strand, 18570108 - 18570165
Alignment:
Q  237 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 294  Q
    ||||||||||||||||||||||| |||||||||| |||||||| ||||| || |||||    
T  18570108 catgatacaaagccaaacccaattaatatagattagctattagagcttactcgaacaa 18570165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 533 - 605
Target Start/End: Original strand, 10178444 - 10178516
Alignment:
Q  533 acttgatgatatttgatgaatatgtgaagatgtgtacttgttgatgtttgttattaatggtgatacttgtaca 605  Q
    ||||| ||| ||||| | || |||||||||||||||||||  |||||||||||||  ||||||||||||||||    
T  10178444 acttggtgaaatttggtaaacatgtgaagatgtgtacttgaggatgtttgttattcttggtgatacttgtaca 10178516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 238 - 293
Target Start/End: Complemental strand, 39537925 - 39537870
Alignment:
Q  238 atgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 293  Q
    |||||||||||| |||| || |||| |||||||||||||||||||||| |||||||    
T  39537925 atgatacaaagctaaactcagtcaacatagattggctattagggcttaatccaaca 39537870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 359 - 437
Target Start/End: Original strand, 19183638 - 19183716
Alignment:
Q  359 attttagcttgacgtacacatgttttgatctcgattttatagatccttgcaaagttatgctgattttgtgtgtctattt 437  Q
    ||||||||| ||| ||||||| ||||||||| ||||||||||||  ||||||  |||| ||| | ||||||||||||||    
T  19183638 attttagctcgacttacacattttttgatcttgattttatagatttttgcaattttatactggtattgtgtgtctattt 19183716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 533 - 587
Target Start/End: Complemental strand, 24192580 - 24192526
Alignment:
Q  533 acttgatgatatttgatgaatatgtgaagatgtgtacttgttgatgtttgttatt 587  Q
    ||||| ||| ||||| ||||||| ||||||||||||||||| |||||||||||||    
T  24192580 acttggtgaaatttggtgaatatatgaagatgtgtacttgtagatgtttgttatt 24192526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 83 - 151
Target Start/End: Complemental strand, 11479489 - 11479420
Alignment:
Q  83 tccttatgtttaatg-gggtctcacaattaagttatacttaatgttccattaaacggactaactattcta 151  Q
    ||||||||||||||| |||||||||||| |||| | ||||||| || ||||||||  ||||| |||||||    
T  11479489 tccttatgtttaatgagggtctcacaatcaagtcacacttaatatttcattaaacacactaattattcta 11479420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0657 (Bit Score: 170; Significance: 6e-91; HSPs: 2)
Name: scaffold0657
Description:

Target: scaffold0657; HSP #1
Raw Score: 170; E-Value: 6e-91
Query Start/End: Original strand, 4 - 201
Target Start/End: Complemental strand, 1190 - 993
Alignment:
Q  4 tacctacataatagtctctatgctttaatgatatcccacttctcaacaaaacttgactacggatactttgagaatagtttccttatgtttaatggggtct 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| |||||||||||||||||||| ||||||||||||||||||    
T  1190 tacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatactttgagaatagtttctttatgtttaatggggtct 1091  T
Q  104 cacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 201  Q
    |||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  1090 cacaattaagttatacttaatgtttcattaaacggactaactattttagggactttattattttgaaacaaaacaaaatcaataaagaaatgtcttgt 993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0657; HSP #2
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 237 - 293
Target Start/End: Complemental strand, 957 - 901
Alignment:
Q  237 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 293  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  957 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186 (Bit Score: 166; Significance: 2e-88; HSPs: 2)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 166; E-Value: 2e-88
Query Start/End: Original strand, 4 - 201
Target Start/End: Original strand, 26000 - 26197
Alignment:
Q  4 tacctacataatagtctctatgctttaatgatatcccacttctcaacaaaacttgactacggatactttgagaatagtttccttatgtttaatggggtct 103  Q
    |||||||||||||||| |||||||||||||||||||||||| |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  26000 tacctacataatagtcgctatgctttaatgatatcccacttttcaataaagcttgactacggatactttgagaatagtttccttatgtttaatggggtct 26099  T
Q  104 cacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 201  Q
    ||||||||||||||| |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  26100 cacaattaagttatatttaatgttccattaaatggactaactattctaaggactttattattttgaaacaaaacaaaatcaataaagaaatgtcttgt 26197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 238 - 294
Target Start/End: Original strand, 26231 - 26287
Alignment:
Q  238 atgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 294  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  26231 atgatacaaagccaaacccaatcaatatagattgactattagggcttattccaacaa 26287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 152; Significance: 4e-80; HSPs: 2)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 152; E-Value: 4e-80
Query Start/End: Original strand, 4 - 199
Target Start/End: Complemental strand, 5726 - 5531
Alignment:
Q  4 tacctacataatagtctctatgctttaatgatatcccacttctcaacaaaacttgactacggatactttgagaatagtttccttatgtttaatggggtct 103  Q
    |||| |||||||||||| |||||||||||||||||||||||||||| ||| |||||||||  ||||||| |||||| ||||||||||||||| |||||||    
T  5726 tacccacataatagtctttatgctttaatgatatcccacttctcaataaagcttgactacatatactttaagaataatttccttatgtttaacggggtct 5627  T
Q  104 cacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcctt 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  5626 cacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaaataaatcaataaagaaatgcctt 5531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063; HSP #2
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 237 - 294
Target Start/End: Complemental strand, 5492 - 5435
Alignment:
Q  237 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 294  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| | ||||||    
T  5492 catgatacaaagccaaacccaaacaatatagattggctattagggcttacttcaacaa 5435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 138; Significance: 8e-72; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 138; E-Value: 8e-72
Query Start/End: Original strand, 18 - 199
Target Start/End: Original strand, 230365 - 230545
Alignment:
Q  18 tctctatgctttaatgatatcccacttctcaacaaaacttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttat 117  Q
    |||||||||||||||||||||||||||||||| ||| |||||||||  ||||||| ||||| |||||||||||||||| |||||||||||||||||||||    
T  230365 tctctatgctttaatgatatcccacttctcaataaatcttgactacaaatactttaagaatggtttccttatgtttaa-ggggtctcacaattaagttat 230463  T
Q  118 acttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcctt 199  Q
    ||||||||||||||||||||||||||||||| || | |||||||||||||||||||||||||||||||||||||||||||||    
T  230464 acttaatgttccattaaacggactaactattataagaactttattattttgaaacaaaacaaaatcaataaagaaatgcctt 230545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 237 - 293
Target Start/End: Original strand, 230584 - 230640
Alignment:
Q  237 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 293  Q
    ||||||||||||||||||||||||||||||||||||||||||  ||||| |||||||    
T  230584 catgatacaaagccaaacccaatcaatatagattggctattattgcttactccaaca 230640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 96; Significance: 9e-47; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 515 - 614
Target Start/End: Original strand, 39922 - 40021
Alignment:
Q  515 gagtttggtgaattgtacacttgatgatatttgatgaatatgtgaagatgtgtacttgttgatgtttgttattaatggtgatacttgtacatttgatgat 614  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39922 gagtttggtgaattgtacacttgatgatatttggtgaatatgtgaagatgtgtacttgttgatgtttgttattaatggtgatacttgtacatttgatgat 40021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1923 (Bit Score: 84; Significance: 1e-39; HSPs: 1)
Name: scaffold1923
Description:

Target: scaffold1923; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 515 - 614
Target Start/End: Complemental strand, 1182 - 1083
Alignment:
Q  515 gagtttggtgaattgtacacttgatgatatttgatgaatatgtgaagatgtgtacttgttgatgtttgttattaatggtgatacttgtacatttgatgat 614  Q
    ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  1182 gagtttggtgaattgtacacttggtgatatttggtgaatatgtgaagatgtgtacttgttgatgtttgttgttaatggtgaaacttgtacatttgatgat 1083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 63; Significance: 5e-27; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 515 - 609
Target Start/End: Original strand, 34768 - 34862
Alignment:
Q  515 gagtttggtgaattgtacacttgatgatatttgatgaatatgtgaagatgtgtacttgttgatgtttgttattaatggtgatacttgtacatttg 609  Q
    ||||||||||||||||||||||| ||||||| | ||||| |||||||||||||||||| ||||||||||| ||| |||| |||||||||||||||    
T  34768 gagtttggtgaattgtacacttggtgatattcggtgaatgtgtgaagatgtgtacttgatgatgtttgttgttattggtaatacttgtacatttg 34862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 61; Significance: 7e-26; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 137 - 201
Target Start/End: Original strand, 8446 - 8510
Alignment:
Q  137 ggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 201  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  8446 ggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgtcttgt 8510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 237 - 294
Target Start/End: Original strand, 8546 - 8603
Alignment:
Q  237 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 294  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  8546 catgatacaaagccgaacccaatcaatatagattggctattagggcttattccaacaa 8603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 58; Significance: 4e-24; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 237 - 294
Target Start/End: Original strand, 23769 - 23826
Alignment:
Q  237 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 294  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23769 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 23826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326 (Bit Score: 54; Significance: 1e-21; HSPs: 2)
Name: scaffold0326
Description:

Target: scaffold0326; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 237 - 294
Target Start/End: Complemental strand, 16579 - 16522
Alignment:
Q  237 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 294  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16579 catgatataaagccaaacccaatcaatatagattggctattagggcttattccaacaa 16522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 168 - 201
Target Start/End: Complemental strand, 16648 - 16615
Alignment:
Q  168 gaaacaaaacaaaatcaataaagaaatgccttgt 201  Q
    ||| ||||||||||||||||||||||||||||||    
T  16648 gaancaaaacaaaatcaataaagaaatgccttgt 16615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0705 (Bit Score: 46; Significance: 6e-17; HSPs: 1)
Name: scaffold0705
Description:

Target: scaffold0705; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 237 - 294
Target Start/End: Original strand, 41 - 98
Alignment:
Q  237 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 294  Q
    |||||||||||||||||  |||||| ||||||||||||||||||||||||||||||||    
T  41 catgatacaaagccaaaatcaatcattatagattggctattagggcttattccaacaa 98  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0637 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: scaffold0637
Description:

Target: scaffold0637; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 237 - 293
Target Start/End: Complemental strand, 9000 - 8944
Alignment:
Q  237 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 293  Q
    ||||||||||||||||||||| |||| |||||||||||||| |||||||||||||||    
T  9000 catgatacaaagccaaacccattcaacatagattggctatttgggcttattccaaca 8944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 39; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 237 - 291
Target Start/End: Original strand, 10202 - 10256
Alignment:
Q  237 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaa 291  Q
    |||||||||||| ||||| |||||||||||||||||||||||| ||||| |||||    
T  10202 catgatacaaagtcaaactcaatcaatatagattggctattagagcttactccaa 10256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 151 - 182
Target Start/End: Original strand, 10127 - 10158
Alignment:
Q  151 agggactttattattttgaaacaaaacaaaat 182  Q
    ||||||||||||||||||||||||||||||||    
T  10127 agggactttattattttgaaacaaaacaaaat 10158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0767 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0767
Description:

Target: scaffold0767; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 257 - 293
Target Start/End: Original strand, 1 - 37
Alignment:
Q  257 aatcaatatagattggctattagggcttattccaaca 293  Q
    |||||||||||||||||||||||||||||||||||||    
T  1 aatcaatatagattggctattagggcttattccaaca 37  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0267 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0267
Description:

Target: scaffold0267; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 361 - 437
Target Start/End: Complemental strand, 8691 - 8615
Alignment:
Q  361 tttagcttgacgtacacatgttttgatctcgattttatagatccttgcaaagttatgctgattttgtgtgtctattt 437  Q
    ||||||| ||| |||| | ||||||||| |||||||||||||  |||||| ||||||||| | ||||||||||||||    
T  8691 tttagctcgacttacagaagttttgatcacgattttatagatttttgcaatgttatgctggtattgtgtgtctattt 8615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 241 - 294
Target Start/End: Complemental strand, 5930 - 5877
Alignment:
Q  241 atacaaagccaaacccaatcaatatagattggctattagggcttattccaacaa 294  Q
    |||||||| ||||| ||||||||||||||||||||||| | |||| ||||||||    
T  5930 atacaaagtcaaactcaatcaatatagattggctattatgacttactccaacaa 5877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0650 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 359 - 434
Target Start/End: Original strand, 6516 - 6591
Alignment:
Q  359 attttagcttgacgtacacatgttttgatctcgattttatagatccttgcaaagttatgctgattttgtgtgtcta 434  Q
    |||||||||  || ||||| | |||| |||||||||||||||||  |||||| ||||||||| | |||||||||||    
T  6516 attttagctcaacttacacttttttttatctcgattttatagatttttgcaatgttatgctggtattgtgtgtcta 6591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 100 - 172
Target Start/End: Complemental strand, 92267 - 92194
Alignment:
Q  100 gtctcacaattaagttatacttaatgttcca-ttaaacggactaactattctagggactttattattttgaaac 172  Q
    ||||||| ||||||||||||||||||||||| |||||   ||||  |||||||| |||||||||| ||| ||||    
T  92267 gtctcacgattaagttatacttaatgttccatttaaaataactagatattctagagactttattactttaaaac 92194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0453 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 373 - 437
Target Start/End: Original strand, 9396 - 9460
Alignment:
Q  373 tacacatgttttgatctcgattttatagatccttgcaaagttatgctgattttgtgtgtctattt 437  Q
    ||||||| ||||||| | ||||||||| ||  |||||| ||||||||| | ||||||||||||||    
T  9396 tacacattttttgattttgattttataaatttttgcaatgttatgctggtattgtgtgtctattt 9460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University