View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1595_low_5 (Length: 300)
Name: NF1595_low_5
Description: NF1595
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1595_low_5 |
 | |
|
| [»] scaffold0750 (1 HSPs) |
| | |
|
| [»] scaffold0124 (1 HSPs) |
| | |
|
| [»] scaffold0036 (1 HSPs) |
| | |
|
| [»] scaffold0351 (1 HSPs) |
| | |
|
| [»] scaffold0024 (1 HSPs) |
| | |
|
Alignment Details
Target: chr3 (Bit Score: 210; Significance: 1e-115; HSPs: 5)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 50 - 271
Target Start/End: Complemental strand, 6986003 - 6985782
Alignment:
| Q |
50 |
gaattggtttggcacaaacatgttcccctcaaggtgtctatttttgcttggaggttgattcgagatagacttcctacaatgtctaatttagcatatcgtg |
149 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || |
|
|
| T |
6986003 |
gaattggtttggcacaaacatgttcccctcaaggtgtctatttttgcttggaggttgattcgagatagacttcatacaatgtctaatttagcatatcatg |
6985904 |
T |
|
| Q |
150 |
gtatcttgaattcagaggcatgcttatgtgtgacaggatgtggtttcgtggaagatgcacgacatttatttttgtcttgcagtttctttggttctttatg |
249 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6985903 |
gtatcttgaattcagaggcatgcttttgtgtgacaggatgtggtttcgtggaagatgcacgacatttatttttgtcttgcagtttctttggttctttatg |
6985804 |
T |
|
| Q |
250 |
gtttttggtgaggtcttggata |
271 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
6985803 |
gtttttggtgaggtcttggata |
6985782 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 50 - 271
Target Start/End: Complemental strand, 8130052 - 8129831
Alignment:
| Q |
50 |
gaattggtttggcacaaacatgttcccctcaaggtgtctatttttgcttggaggttgattcgagatagacttcctacaatgtctaatttagcatatcgtg |
149 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| |
|
|
| T |
8130052 |
gaattggtttggcacaaacatgttcccctcaaggtgtctatttttgcttggaggttgattcgagatagacttcctacaatgtctaatttaatatttcgtg |
8129953 |
T |
|
| Q |
150 |
gtatcttgaattcagaggcatgcttatgtgtgacaggatgtggtttcgtggaagatgcacgacatttatttttgtcttgcagtttctttggttctttatg |
249 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
8129952 |
gtatcttgaattcagaggcatgcttatgtgtaacaggttgtggtttcgtggaagatgcacgacatttatttttgtcttgcagtttctttgattctttatg |
8129853 |
T |
|
| Q |
250 |
gtttttggtgaggtcttggata |
271 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
8129852 |
gtttttggtgaggtcttggata |
8129831 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 106
Target Start/End: Original strand, 52251167 - 52251219
Alignment:
| Q |
54 |
tggtttggcacaaacatgttcccctcaaggtgtctatttttgcttggaggttg |
106 |
Q |
| |
|
|||||||||| ||||||||||| || ||||| || |||||||||||||||||| |
|
|
| T |
52251167 |
tggtttggcataaacatgttccacttaaggtttccatttttgcttggaggttg |
52251219 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 106
Target Start/End: Original strand, 19548529 - 19548579
Alignment:
| Q |
56 |
gtttggcacaaacatgttcccctcaaggtgtctatttttgcttggaggttg |
106 |
Q |
| |
|
|||||||| ||||||||||| || ||||| || |||||||||||||||||| |
|
|
| T |
19548529 |
gtttggcataaacatgttccacttaaggtctcaatttttgcttggaggttg |
19548579 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 106
Target Start/End: Complemental strand, 48929825 - 48929772
Alignment:
| Q |
53 |
ttggtttggcacaaacatgttcccctcaaggtgtctatttttgcttggaggttg |
106 |
Q |
| |
|
||||||||||||| |||||||| || ||||| | ||||||||||||||||||| |
|
|
| T |
48929825 |
ttggtttggcacattcatgttccgcttaaggtctttatttttgcttggaggttg |
48929772 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 206; Significance: 1e-112; HSPs: 6)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 50 - 271
Target Start/End: Original strand, 22877504 - 22877725
Alignment:
| Q |
50 |
gaattggtttggcacaaacatgttcccctcaaggtgtctatttttgcttggaggttgattcgagatagacttcctacaatgtctaatttagcatatcgtg |
149 |
Q |
| |
|
|||| ||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
22877504 |
gaatgggtttggcacaaacatgtttcccttaaggtgtctatttttgcttggaggttgattcgagatagacttcctacaaagtctaatttagcatatcgtg |
22877603 |
T |
|
| Q |
150 |
gtatcttgaattcagaggcatgcttatgtgtgacaggatgtggtttcgtggaagatgcacgacatttatttttgtcttgcagtttctttggttctttatg |
249 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22877604 |
gtatcttgaattcagaggcatgcttatgtgtgacaggatgtggtttcgtggaagatgcacgacatttatttttgtcttgcagtttctttggttctttatg |
22877703 |
T |
|
| Q |
250 |
gtttttggtgaggtcttggata |
271 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
22877704 |
gtttttggtgaggtcttggata |
22877725 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 50 - 271
Target Start/End: Complemental strand, 40688168 - 40687947
Alignment:
| Q |
50 |
gaattggtttggcacaaacatgttcccctcaaggtgtctatttttgcttggaggttgattcgagatagacttcctacaatgtctaatttagcatatcgtg |
149 |
Q |
| |
|
|||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
40688168 |
gaattggtttggcacaaacaggttccccttaaggtgtctatttttgcttggaggttgattcgagatagacttcctacaaagtctaatttagcatatcgtg |
40688069 |
T |
|
| Q |
150 |
gtatcttgaattcagaggcatgcttatgtgtgacaggatgtggtttcgtggaagatgcacgacatttatttttgtcttgcagtttctttggttctttatg |
249 |
Q |
| |
|
|||| ||||||||||||||||| ||||||||| ||||||||||||| |||||||||| ||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
40688068 |
gtatattgaattcagaggcatgtttatgtgtgtcaggatgtggtttattggaagatgctcgacatttatttttgtcttgcagcttctttggttctttatg |
40687969 |
T |
|
| Q |
250 |
gtttttggtgaggtcttggata |
271 |
Q |
| |
|
|| |||||||||||||||||| |
|
|
| T |
40687968 |
gtcgttggtgaggtcttggata |
40687947 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 53 - 271
Target Start/End: Original strand, 19163219 - 19163436
Alignment:
| Q |
53 |
ttggtttggcacaaacatgttcccctcaaggtgtctatttttgcttggaggttgattcgagatagacttcctacaatgtctaatttagcatatcgtggta |
152 |
Q |
| |
|
||||||||||||||||| |||||||| ||| ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
19163219 |
ttggtttggcacaaacaggttccccttaag-tgtctatttttgcttggagattgattcgagatagacttcctacaaagtctaatttagcatatcgtggta |
19163317 |
T |
|
| Q |
153 |
tcttgaattcagaggcatgcttatgtgtgacaggatgtggtttcgtggaagatgcacgacatttatttttgtcttgcagtttctttggttctttatggtt |
252 |
Q |
| |
|
| |||||||||||||| || ||||||||| |||| |||||| | |||||||||| ||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
19163318 |
ttttgaattcagaggcttgtttatgtgtgtcagggtgtggtgttttggaagatgctcgacatttatttttgtcttgcagcttctttggttctttatggtc |
19163417 |
T |
|
| Q |
253 |
tttggtgaggtcttggata |
271 |
Q |
| |
|
|||||||| || |||||| |
|
|
| T |
19163418 |
gttggtgagatcctggata |
19163436 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 101 - 271
Target Start/End: Complemental strand, 17874945 - 17874775
Alignment:
| Q |
101 |
aggttgattcgagatagacttcctacaatgtctaatttagcatatcgtggtatcttgaattcagaggcatgcttatgtgtgacaggatgtggtttcgtgg |
200 |
Q |
| |
|
|||||| |||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||| |||||||||||||||||| |
|
|
| T |
17874945 |
aggttgtttcgagatcgacttcctacaatgtctaatttagcatattgtggtatcttgaattcagaggcgtgcttatgtgtgtcaggatgtggtttcgtgg |
17874846 |
T |
|
| Q |
201 |
aagatgcacgacatttatttttgtcttgcagtttctttggttctttatggtttttggtgaggtcttggata |
271 |
Q |
| |
|
||||||| || |||||||||||||| ||||| ||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
17874845 |
aagatgctcgtcatttatttttgtcgtgcagcttctttggttctttatggtctttggtgaggtcttggata |
17874775 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 171 - 271
Target Start/End: Original strand, 23130969 - 23131069
Alignment:
| Q |
171 |
gcttatgtgtgacaggatgtggtttcgtggaagatgcacgacatttatttttgtcttgcagtttctttggttctttatggtttttggtgaggtcttggat |
270 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
23130969 |
gcttatgtgtgacaggatgcggtttcgtggaagatgcacgatatttatttttgtcttgcagtttttttggttctttatggtttttggtgaggtcttggat |
23131068 |
T |
|
| Q |
271 |
a |
271 |
Q |
| |
|
| |
|
|
| T |
23131069 |
a |
23131069 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 47 - 270
Target Start/End: Complemental strand, 54684714 - 54684491
Alignment:
| Q |
47 |
gatgaattggtttggcacaaacatgttcccctcaaggtgtctatttttgcttggaggttgattcgagatagacttcctacaatgtctaatttagcatatc |
146 |
Q |
| |
|
||||| ||| ||||||| || |||||||| || |||||||||||||| |||||| ||||| |||| ||| ||||||| || | |||||| |||||| | |
|
|
| T |
54684714 |
gatgatttgatttggcataagcatgttccgcttaaggtgtctattttcgcttggcggttgcttcgtgatcgacttcccactaagtctaacttagcaaccc |
54684615 |
T |
|
| Q |
147 |
gtggtatcttgaattcagaggcatgcttatgtgtgacaggatgtggtttcgtggaagatgcacgacatttatttttgtcttgcagtttctttggttcttt |
246 |
Q |
| |
|
||||||||||| ||| | |||| || ||||||||| |||| ||||| | ||||||||||||| ||| ||||| |||||||||| | |||||||||||| |
|
|
| T |
54684614 |
gtggtatcttggatttacaggcgtgtttatgtgtgtcaggttgtggactgttggaagatgcacgccatctatttctgtcttgcagatgctttggttcttt |
54684515 |
T |
|
| Q |
247 |
atggtttttggtgaggtcttggat |
270 |
Q |
| |
|
|||| ||| |||||||||||||| |
|
|
| T |
54684514 |
atggcctttagtgaggtcttggat |
54684491 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 198; Significance: 1e-108; HSPs: 6)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 50 - 271
Target Start/End: Complemental strand, 13415784 - 13415563
Alignment:
| Q |
50 |
gaattggtttggcacaaacatgttcccctcaaggtgtctatttttgcttggaggttgattcgagatagacttcctacaatgtctaatttagcatatcgtg |
149 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13415784 |
gaattggtttggcacaaacatgttccccttaaggtgtctattttttcttggaggttgattcgagatagacttcctacaatgtctaatttagcatatcgtg |
13415685 |
T |
|
| Q |
150 |
gtatcttgaattcagaggcatgcttatgtgtgacaggatgtggtttcgtggaagatgcacgacatttatttttgtcttgcagtttctttggttctttatg |
249 |
Q |
| |
|
|||| ||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13415684 |
gtattttgaattcagaggcatgcttatgtgtgtcaagatgtggtttcgtggaagatgcacgacatttatttttgtcttgcagtttctttggttctttatg |
13415585 |
T |
|
| Q |
250 |
gtttttggtgaggtcttggata |
271 |
Q |
| |
|
|| ||||||||||||||||||| |
|
|
| T |
13415584 |
gtctttggtgaggtcttggata |
13415563 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 50 - 271
Target Start/End: Original strand, 27951458 - 27951678
Alignment:
| Q |
50 |
gaattggtttggcacaaacatgttcccctcaaggtgtctatttttgcttggaggttgattcgagatagacttcctacaatgtctaatttagcatatcgtg |
149 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||| |||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
27951458 |
gaattggtttggcacaaacatgttccccttaaggtgtttatttttgcttggaggctgattcgagacagacttcctacaatgtctaatttagcatatcgtg |
27951557 |
T |
|
| Q |
150 |
gtatcttgaattcagaggcatgcttatgtgtgacaggatgtggtttcgtggaagatgcacgacatttatttttgtcttgcagtttctttggttctttatg |
249 |
Q |
| |
|
|||| |||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
27951558 |
gtatattgaattcagaggcat-tttatgtgtgtcaggatgtggtttcgtggaagatgcacgacatttatttttgtcttgcagtttttttggttctttatg |
27951656 |
T |
|
| Q |
250 |
gtttttggtgaggtcttggata |
271 |
Q |
| |
|
|||||||||| ||||||||||| |
|
|
| T |
27951657 |
gtttttggtgcggtcttggata |
27951678 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 50 - 271
Target Start/End: Original strand, 6727816 - 6728037
Alignment:
| Q |
50 |
gaattggtttggcacaaacatgttcccctcaaggtgtctatttttgcttggaggttgattcgagatagacttcctacaatgtctaatttagcatatcgtg |
149 |
Q |
| |
|
|||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
6727816 |
gaattggtttggcacaaacaggttccccttaaggtgtctatttttgcttggaggttgattcgagatagacttcctacaaagtctaatttagcatatcgtg |
6727915 |
T |
|
| Q |
150 |
gtatcttgaattcagaggcatgcttatgtgtgacaggatgtggtttcgtggaagatgcacgacatttatttttgtcttgcagtttctttggttctttatg |
249 |
Q |
| |
|
|||||||||||||||||||||| ||||||||| |||| |||||||| |||||||||| ||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
6727916 |
gtatcttgaattcagaggcatgtttatgtgtgtcagggtgtggtttattggaagatgctcgacatttatttttgtcttgcagcttctttggttctttatg |
6728015 |
T |
|
| Q |
250 |
gtttttggtgaggtcttggata |
271 |
Q |
| |
|
|| |||||||||||||||||| |
|
|
| T |
6728016 |
gtcgttggtgaggtcttggata |
6728037 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 53 - 271
Target Start/End: Original strand, 2207864 - 2208082
Alignment:
| Q |
53 |
ttggtttggcacaaacatgttcccctcaaggtgtctatttttgcttggaggttgattcgagatagacttcctacaatgtctaatttagcatatcgtggta |
152 |
Q |
| |
|
||||||||||||||||| ||||| || ||||||||||||||||||||||| ||||||||||| ||||| ||||| | ||| |||||||| | ||||||| |
|
|
| T |
2207864 |
ttggtttggcacaaacaggttcctcttaaggtgtctatttttgcttggagattgattcgagacagactccctaccaagtccaatttagcttcccgtggta |
2207963 |
T |
|
| Q |
153 |
tcttgaattcagaggcatgcttatgtgtgacaggatgtggtttcgtggaagatgcacgacatttatttttgtcttgcagtttctttggttctttatggtt |
252 |
Q |
| |
|
| |||| |||||||||||| ||||||||| |||| ||||| || ||||||| || ||||||||||||||||||||||| || ||||||| |||||| |
|
|
| T |
2207964 |
ttttgagttcagaggcatgtttatgtgtgtcagggtgtggattattggaagacgctcgacatttatttttgtcttgcagattttttggtttattatggcc |
2208063 |
T |
|
| Q |
253 |
tttggtgaggtcttggata |
271 |
Q |
| |
|
||||||| ||||||||| |
|
|
| T |
2208064 |
gctggtgagatcttggata |
2208082 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 198 - 270
Target Start/End: Complemental strand, 36931138 - 36931066
Alignment:
| Q |
198 |
tggaagatgcacgacatttatttttgtcttgcagtttctttggttctttatggtttttggtgaggtcttggat |
270 |
Q |
| |
|
||||||||||||||||| ||||||||||||||| |||||||||||||||| ||| |||||||||||||| |
|
|
| T |
36931138 |
tggaagatgcacgacatctatttttgtcttgcaacgactttggttctttatggcctttagtgaggtcttggat |
36931066 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 53 - 108
Target Start/End: Original strand, 43724184 - 43724239
Alignment:
| Q |
53 |
ttggtttggcacaaacatgttcccctcaaggtgtctatttttgcttggaggttgat |
108 |
Q |
| |
|
|||||||||||||| |||||||| || ||||| || |||||||||||||||||||| |
|
|
| T |
43724184 |
ttggtttggcacaatcatgttccgcttaaggtctcaatttttgcttggaggttgat |
43724239 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0750 (Bit Score: 194; Significance: 1e-105; HSPs: 1)
Name: scaffold0750
Description:
Target: scaffold0750; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 50 - 271
Target Start/End: Complemental strand, 6152 - 5931
Alignment:
| Q |
50 |
gaattggtttggcacaaacatgttcccctcaaggtgtctatttttgcttggaggttgattcgagatagacttcctacaatgtctaatttagcatatcgtg |
149 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
6152 |
gaattggtttggcacaaacatgttcccctcaaggtgtctatttttgcttggaggttgattcgagatagacttcctacaatgtctaatttagcatttcgtg |
6053 |
T |
|
| Q |
150 |
gtatcttgaattcagaggcatgcttatgtgtgacaggatgtggtttcgtggaagatgcacgacatttatttttgtcttgcagtttctttggttctttatg |
249 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||| | | |||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
6052 |
gtatcttgaattcaaaggcatgcttatgtgtgacaagttctggttttgtggaagatgcacgacatttatttttgtcttgtagtttctttggttctttatg |
5953 |
T |
|
| Q |
250 |
gtttttggtgaggtcttggata |
271 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
5952 |
gtttttggtgaggtcttggata |
5931 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0124 (Bit Score: 194; Significance: 1e-105; HSPs: 1)
Name: scaffold0124
Description:
Target: scaffold0124; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 50 - 271
Target Start/End: Complemental strand, 22514 - 22293
Alignment:
| Q |
50 |
gaattggtttggcacaaacatgttcccctcaaggtgtctatttttgcttggaggttgattcgagatagacttcctacaatgtctaatttagcatatcgtg |
149 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
22514 |
gaattggtttggcacaaacatgttcccctcaaggtgtctatttttgcttggaggttgattcgagatagacttcctacaatgtctaatttagcatttcgtg |
22415 |
T |
|
| Q |
150 |
gtatcttgaattcagaggcatgcttatgtgtgacaggatgtggtttcgtggaagatgcacgacatttatttttgtcttgcagtttctttggttctttatg |
249 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||| | | |||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
22414 |
gtatcttgaattcaaaggcatgcttatgtgtgacaagttctggttttgtggaagatgcacgacatttatttttgtcttgtagtttctttggttctttatg |
22315 |
T |
|
| Q |
250 |
gtttttggtgaggtcttggata |
271 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
22314 |
gtttttggtgaggtcttggata |
22293 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0036 (Bit Score: 178; Significance: 5e-96; HSPs: 1)
Name: scaffold0036
Description:
Target: scaffold0036; HSP #1
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 50 - 271
Target Start/End: Original strand, 44848 - 45068
Alignment:
| Q |
50 |
gaattggtttggcacaaacatgttcccctcaaggtgtctatttttgcttggaggttgattcgagatagacttcctacaatgtctaatttagcatatcgtg |
149 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||| |||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
44848 |
gaattggtttggcacaaacatgttccccttaaggtgtttatttttgcttggaggctgattcgagacagacttcctacaatgtctaatttagcatatcgtg |
44947 |
T |
|
| Q |
150 |
gtatcttgaattcagaggcatgcttatgtgtgacaggatgtggtttcgtggaagatgcacgacatttatttttgtcttgcagtttctttggttctttatg |
249 |
Q |
| |
|
|||| |||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
44948 |
gtatattgaattcagaggcat-tttatgtgtgtcaggatgtggtttcgtggaagatgcacgacatttatttttgtcttgcagtttttttggttctttatg |
45046 |
T |
|
| Q |
250 |
gtttttggtgaggtcttggata |
271 |
Q |
| |
|
|||||||||| ||||||||||| |
|
|
| T |
45047 |
gtttttggtgcggtcttggata |
45068 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 150; Significance: 3e-79; HSPs: 7)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 50 - 271
Target Start/End: Original strand, 4310873 - 4311094
Alignment:
| Q |
50 |
gaattggtttggcacaaacatgttcccctcaaggtgtctatttttgcttggaggttgattcgagatagacttcctacaatgtctaatttagcatatcgtg |
149 |
Q |
| |
|
|||||||||||||||||||| |||||||| ||||||||||||||||||||||| |||||| |||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
4310873 |
gaattggtttggcacaaacaggttccccttaaggtgtctatttttgcttggagattgatttgagatagacttcctacaaagtctaatttagcatatcgtg |
4310972 |
T |
|
| Q |
150 |
gtatcttgaattcagaggcatgcttatgtgtgacaggatgtggtttcgtggaagatgcacgacatttatttttgtcttgcagtttctttggttctttatg |
249 |
Q |
| |
|
|||| ||||||||||||||||| ||||||||| ||| |||||||| |||||||||| ||||||||||||||||||| ||| ||||||||||||||||| |
|
|
| T |
4310973 |
gtattttgaattcagaggcatgtttatgtgtgttagggtgtggtttattggaagatgctcgacatttatttttgtctttcagcttctttggttctttatg |
4311072 |
T |
|
| Q |
250 |
gtttttggtgaggtcttggata |
271 |
Q |
| |
|
|| |||||||| ||||||||| |
|
|
| T |
4311073 |
gtcattggtgagatcttggata |
4311094 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 148 - 271
Target Start/End: Original strand, 8564794 - 8564917
Alignment:
| Q |
148 |
tggtatcttgaattcagaggcatgcttatgtgtgacaggatgtggtttcgtggaagatgcacgacatttatttttgtcttgcagtttctttggttcttta |
247 |
Q |
| |
|
|||||| ||||||||||||||||| | ||||||| |||| |||||||| |||||||||| ||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
8564794 |
tggtattttgaattcagaggcatgttaatgtgtgtcagggtgtggttttttggaagatgctcgacatttatttttgtcttgcagcttctttggttcttta |
8564893 |
T |
|
| Q |
248 |
tggtttttggtgaggtcttggata |
271 |
Q |
| |
|
|||| |||||||| ||||||||| |
|
|
| T |
8564894 |
tggtcattggtgagatcttggata |
8564917 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 173 - 273
Target Start/End: Original strand, 39297721 - 39297821
Alignment:
| Q |
173 |
ttatgtgtgacaggatgtggtttcgtggaagatgcacgacatttatttttgtcttgcagtttctttggttctttatggtttttggtgaggtcttggatat |
272 |
Q |
| |
|
||||||||| ||| |||||||| |||||||||| || | |||| |||| || ||||| ||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
39297721 |
ttatgtgtgtcagagtgtggttttgtggaagatgttcgtcgtttaattttttcgtgcagcttctttggttctttatggtctttggtgaggtcttggatat |
39297820 |
T |
|
| Q |
273 |
g |
273 |
Q |
| |
|
| |
|
|
| T |
39297821 |
g |
39297821 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 54 - 106
Target Start/End: Complemental strand, 35029319 - 35029267
Alignment:
| Q |
54 |
tggtttggcacaaacatgttcccctcaaggtgtctatttttgcttggaggttg |
106 |
Q |
| |
|
|||||||||| ||||||||||| || ||||| ||||||||||||||||||||| |
|
|
| T |
35029319 |
tggtttggcataaacatgttccacttaaggtttctatttttgcttggaggttg |
35029267 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 106
Target Start/End: Original strand, 5802160 - 5802210
Alignment:
| Q |
56 |
gtttggcacaaacatgttcccctcaaggtgtctatttttgcttggaggttg |
106 |
Q |
| |
|
|||||||| ||||||||||| || ||||| || |||||||||||||||||| |
|
|
| T |
5802160 |
gtttggcataaacatgttccacttaaggtctcaatttttgcttggaggttg |
5802210 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 106
Target Start/End: Complemental strand, 12331951 - 12331901
Alignment:
| Q |
56 |
gtttggcacaaacatgttcccctcaaggtgtctatttttgcttggaggttg |
106 |
Q |
| |
|
|||||||||||||||||||| || ||||| || |||||||||||| ||||| |
|
|
| T |
12331951 |
gtttggcacaaacatgttccacttaaggtctcaatttttgcttggtggttg |
12331901 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 106
Target Start/End: Complemental strand, 30426534 - 30426484
Alignment:
| Q |
56 |
gtttggcacaaacatgttcccctcaaggtgtctatttttgcttggaggttg |
106 |
Q |
| |
|
|||||||| ||||||||||| || ||||| || |||||||||||||||||| |
|
|
| T |
30426534 |
gtttggcataaacatgttccacttaaggtctcaatttttgcttggaggttg |
30426484 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0351 (Bit Score: 139; Significance: 9e-73; HSPs: 1)
Name: scaffold0351
Description:
Target: scaffold0351; HSP #1
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 53 - 271
Target Start/End: Original strand, 13034 - 13252
Alignment:
| Q |
53 |
ttggtttggcacaaacatgttcccctcaaggtgtctatttttgcttggaggttgattcgagatagacttcctacaatgtctaatttagcatatcgtggta |
152 |
Q |
| |
|
||||||||||||||||| || ||||| ||||| |||||||| |||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
13034 |
ttggtttggcacaaacaggtcccccttaaggtctctattttcgcttggagattgattcgagatagacttcctacaaagtctaatttagcatatcgtggta |
13133 |
T |
|
| Q |
153 |
tcttgaattcagaggcatgcttatgtgtgacaggatgtggtttcgtggaagatgcacgacatttatttttgtcttgcagtttctttggttctttatggtt |
252 |
Q |
| |
|
| |||||| |||||||||| ||||||||| |||| |||||||| |||||||||| ||||||||||||||||||||||| ||||||| ||||||||||| |
|
|
| T |
13134 |
ttttgaatacagaggcatgtttatgtgtgtcagggtgtggttttttggaagatgctcgacatttatttttgtcttgcagcttctttgattctttatggtc |
13233 |
T |
|
| Q |
253 |
tttggtgaggtcttggata |
271 |
Q |
| |
|
|||||||| ||||||||| |
|
|
| T |
13234 |
attggtgagatcttggata |
13252 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 137; Significance: 1e-71; HSPs: 3)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 47 - 271
Target Start/End: Complemental strand, 35837313 - 35837089
Alignment:
| Q |
47 |
gatgaattggtttggcacaaacatgttcccctcaaggtgtctatttttgcttggaggttgattcgagatagacttcctacaatgtctaatttagcatatc |
146 |
Q |
| |
|
||||||||||||||||||||||| ||||| || |||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||||||||||| |
|
|
| T |
35837313 |
gatgaattggtttggcacaaacaggttccgcttaaggtgtctatttttgcttggaggttgattcgcgatcgacttcctacaaagtctaatttagcatatc |
35837214 |
T |
|
| Q |
147 |
gtggtatcttgaattcagaggcatgcttatgtgtgacaggatgtggtttcgtggaagatgcacgacatttatttttgtcttgcagtttctttggttcttt |
246 |
Q |
| |
|
||||||||||| |||||||||| |||||||||||| |||| |||||| | ||||||||||| | ||||| |||||||| |||| ||||||||||| || |
|
|
| T |
35837213 |
gtggtatcttggattcagaggcgtgcttatgtgtgtcagggtgtggtcttgtggaagatgctcaccatttctttttgtcctgcaaattctttggttcatt |
35837114 |
T |
|
| Q |
247 |
atggtttttggtgaggtcttggata |
271 |
Q |
| |
|
|||| ||||||||||||||||||| |
|
|
| T |
35837113 |
atggcctttggtgaggtcttggata |
35837089 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 50 - 271
Target Start/End: Complemental strand, 36255880 - 36255659
Alignment:
| Q |
50 |
gaattggtttggcacaaacatgttcccctcaaggtgtctatttttgcttggaggttgattcgagatagacttcctacaatgtctaatttagcatatcgtg |
149 |
Q |
| |
|
|||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||||||||| ||||||| |||||||||||||||||||| |
|
|
| T |
36255880 |
gaattggtttggcacaaacaggttccccttaaggtgtctatttttgcttggagattgattcgagatagactccctacaaagtctaatttagcatatcgtg |
36255781 |
T |
|
| Q |
150 |
gtatcttgaattcagaggcatgcttatgtgtgacaggatgtggtttcgtggaagatgcacgacatttatttttgtcttgcagtttctttggttctttatg |
249 |
Q |
| |
|
| || |||||||||||||| || ||||||||| |||| |||||||| || |||| || ||||||||||||||||| |||| ||||||||| ||||||| |
|
|
| T |
36255780 |
ggattttgaattcagaggcttgtttatgtgtgtcagggtgtggttttttgaaagacgctcgacatttatttttgtcctgcaacttctttggtactttatg |
36255681 |
T |
|
| Q |
250 |
gtttttggtgaggtcttggata |
271 |
Q |
| |
|
|| ||| |||| ||||||||| |
|
|
| T |
36255680 |
gtcgttgatgagatcttggata |
36255659 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 53 - 106
Target Start/End: Complemental strand, 25672050 - 25671997
Alignment:
| Q |
53 |
ttggtttggcacaaacatgttcccctcaaggtgtctatttttgcttggaggttg |
106 |
Q |
| |
|
|||||||||||||| |||||| | || ||||| ||||||||||||||||||||| |
|
|
| T |
25672050 |
ttggtttggcacaaccatgttacgcttaaggtctctatttttgcttggaggttg |
25671997 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 135; Significance: 2e-70; HSPs: 3)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 53 - 271
Target Start/End: Original strand, 45165601 - 45165819
Alignment:
| Q |
53 |
ttggtttggcacaaacatgttcccctcaaggtgtctatttttgcttggaggttgattcgagatagacttcctacaatgtctaatttagcatatcgtggta |
152 |
Q |
| |
|
||||||||||||||| | |||||||| ||||||| ||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| || |
|
|
| T |
45165601 |
ttggtttggcacaaagaggttccccttaaggtgtttatttttgcttggagattgattcgagatagacttcctacaaagtctaatttagcatatcgtgata |
45165700 |
T |
|
| Q |
153 |
tcttgaattcagaggcatgcttatgtgtgacaggatgtggtttcgtggaagatgcacgacatttatttttgtcttgcagtttctttggttctttatggtt |
252 |
Q |
| |
|
| ||||||||||||||||| ||||||||| ||| |||||||| |||||||||| ||||||||||||||||||||||| ||||||| ||||||||||| |
|
|
| T |
45165701 |
ttttgaattcagaggcatgtttatgtgtgttagggtgtggtttattggaagatgctcgacatttatttttgtcttgcagcttctttgcttctttatggtc |
45165800 |
T |
|
| Q |
253 |
tttggtgaggtcttggata |
271 |
Q |
| |
|
|||||||| || |||||| |
|
|
| T |
45165801 |
gttggtgagatcctggata |
45165819 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 53 - 271
Target Start/End: Complemental strand, 39694569 - 39694351
Alignment:
| Q |
53 |
ttggtttggcacaaacatgttcccctcaaggtgtctatttttgcttggaggttgattcgagatagacttcctacaatgtctaatttagcatatcgtggta |
152 |
Q |
| |
|
||||||||||||||||| ||||| || ||||||||||||||||||||||| ||||||||||| ||||| ||||| | ||| |||||||| | ||||||| |
|
|
| T |
39694569 |
ttggtttggcacaaacaggttcctcttaaggtgtctatttttgcttggagattgattcgagacagactccctaccaagtccaatttagcttcccgtggta |
39694470 |
T |
|
| Q |
153 |
tcttgaattcagaggcatgcttatgtgtgacaggatgtggtttcgtggaagatgcacgacatttatttttgtcttgcagtttctttggttctttatggtt |
252 |
Q |
| |
|
| |||| |||||||||||| ||||||||| |||| |||||||| ||||||| || ||||||||||||||||||||||| || ||||||| |||||| |
|
|
| T |
39694469 |
ttttgagttcagaggcatgtttatgtgtgtcagggtgtggtttattggaagacgctcgacatttatttttgtcttgcagattttttggtttattatggcc |
39694370 |
T |
|
| Q |
253 |
tttggtgaggtcttggata |
271 |
Q |
| |
|
||||||| ||||||||| |
|
|
| T |
39694369 |
gctggtgagatcttggata |
39694351 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 53 - 270
Target Start/End: Original strand, 6343682 - 6343899
Alignment:
| Q |
53 |
ttggtttggcacaaacatgttcccctcaaggtgtctatttttgcttggaggttgattcgagatagacttcctacaatgtctaatttagcatatcgtggta |
152 |
Q |
| |
|
||||||||||| || |||||||| | ||||||||||||||||||||| ||||| |||| ||| ||||||| || | |||||| |||||| |||||| |
|
|
| T |
6343682 |
ttggtttggcataagcatgttccgattaaggtgtctatttttgcttggcggttgcttcgtgatcgacttcccactaagtctaacttagcaacctgtggta |
6343781 |
T |
|
| Q |
153 |
tcttgaattcagaggcatgcttatgtgtgacaggatgtggtttcgtggaagatgcacgacatttatttttgtcttgcagtttctttggttctttatggtt |
252 |
Q |
| |
|
| ||| ||| ||| || |||||||| |||| ||||| || ||||||||||||||||| |||||||||||||||| | ||||||| |||||||| |
|
|
| T |
6343782 |
ttttggattttcaggtgtgtttatgtgtatcagggtgtggcttgatggaagatgcacgacatctatttttgtcttgcagctactttggtactttatggcc |
6343881 |
T |
|
| Q |
253 |
tttggtgaggtcttggat |
270 |
Q |
| |
|
||| |||||||||||||| |
|
|
| T |
6343882 |
tttagtgaggtcttggat |
6343899 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 68; Significance: 2e-30; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 47 - 270
Target Start/End: Original strand, 30712915 - 30713138
Alignment:
| Q |
47 |
gatgaattggtttggcacaaacatgttcccctcaaggtgtctatttttgcttggaggttgattcgagatagacttcctacaatgtctaatttagcatatc |
146 |
Q |
| |
|
||||| ||||||||||| || |||||||| || |||||||||||||| |||||| ||||| |||| ||| ||||||| || | |||||| |||| | |
|
|
| T |
30712915 |
gatgatttggtttggcataagcatgttccgcttaaggtgtctattttcgcttggcggttgcttcgtgatcgacttcccactaagtctaacttagtaacct |
30713014 |
T |
|
| Q |
147 |
gtggtatcttgaattcagaggcatgcttatgtgtgacaggatgtggtttcgtggaagatgcacgacatttatttttgtcttgcagtttctttggttcttt |
246 |
Q |
| |
|
||||||||||| ||| | |||| || ||||||||| |||| ||||| | |||||||||||| ||| ||||| |||||||||| | |||||||||||| |
|
|
| T |
30713015 |
gtggtatcttggatttacaggcgtgtttatgtgtgtcaggttgtggactgttggaagatgcacaccatatatttctgtcttgcagatgctttggttcttt |
30713114 |
T |
|
| Q |
247 |
atggtttttggtgaggtcttggat |
270 |
Q |
| |
|
|||| ||| |||||||||||||| |
|
|
| T |
30713115 |
atggcctttagtgaggtcttggat |
30713138 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 53 - 106
Target Start/End: Complemental strand, 45270339 - 45270286
Alignment:
| Q |
53 |
ttggtttggcacaaacatgttcccctcaaggtgtctatttttgcttggaggttg |
106 |
Q |
| |
|
|||||||||||||| |||||||| || ||||| ||||||||||||||||||||| |
|
|
| T |
45270339 |
ttggtttggcacaaccatgttccgcttaaggtctctatttttgcttggaggttg |
45270286 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 57 - 106
Target Start/End: Complemental strand, 41150108 - 41150059
Alignment:
| Q |
57 |
tttggcacaaacatgttcccctcaaggtgtctatttttgcttggaggttg |
106 |
Q |
| |
|
|||||||||| |||||||| || ||||| ||||||||||||||||||||| |
|
|
| T |
41150108 |
tttggcacaaccatgttccgcttaaggtctctatttttgcttggaggttg |
41150059 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 66; Significance: 3e-29; HSPs: 3)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 53 - 270
Target Start/End: Complemental strand, 15602422 - 15602205
Alignment:
| Q |
53 |
ttggtttggcacaaacatgttcccctcaaggtgtctatttttgcttggaggttgattcgagatagacttcctacaatgtctaatttagcatatcgtggta |
152 |
Q |
| |
|
||||||||||| || |||||||| | ||||||||||||||||||||| ||||| |||| ||| || |||| || | |||||| |||||| ||||||| |
|
|
| T |
15602422 |
ttggtttggcataaccatgttccgattaaggtgtctatttttgcttggcggttgcttcgtgatcgatttcccactaagtctaacttagcaacccgtggta |
15602323 |
T |
|
| Q |
153 |
tcttgaattcagaggcatgcttatgtgtgacaggatgtggtttcgtggaagatgcacgacatttatttttgtcttgcagtttctttggttctttatggtt |
252 |
Q |
| |
|
| ||| ||| |||| || |||||||| |||| || || | ||||||||||||||||| |||||||||||||||| | |||||||||||||||| |
|
|
| T |
15602322 |
ttttggattttcaggcgtgtttatgtgtatcaggttgcggcatgttggaagatgcacgacatctatttttgtcttgcagctactttggttctttatggcc |
15602223 |
T |
|
| Q |
253 |
tttggtgaggtcttggat |
270 |
Q |
| |
|
||| |||||||||||||| |
|
|
| T |
15602222 |
tttagtgaggtcttggat |
15602205 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 117 - 270
Target Start/End: Original strand, 28633359 - 28633512
Alignment:
| Q |
117 |
gacttcctacaatgtctaatttagcatatcgtggtatcttgaattcagaggcatgcttatgtgtgacaggatgtggtttcgtggaagatgcacgacattt |
216 |
Q |
| |
|
||||||| || | ||||||||||||| | |||||||||||| || | |||| ||||| |||||| |||| |||||| || |||||||||| || ||||| |
|
|
| T |
28633359 |
gacttcccactaagtctaatttagcaaaccgtggtatcttggatgctcaggcgtgcttgtgtgtgtcaggttgtggtctcttggaagatgcgcgccattt |
28633458 |
T |
|
| Q |
217 |
atttttgtcttgcagtttctttggttctttatggtttttggtgaggtcttggat |
270 |
Q |
| |
|
||||||||||||||| | |||||| ||||||||| ||| |||||||||||||| |
|
|
| T |
28633459 |
atttttgtcttgcagatgctttggctctttatggcctttagtgaggtcttggat |
28633512 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 106
Target Start/End: Complemental strand, 34434362 - 34434309
Alignment:
| Q |
53 |
ttggtttggcacaaacatgttcccctcaaggtgtctatttttgcttggaggttg |
106 |
Q |
| |
|
||||||||||| || |||||||| || || || ||||||||||||||||||||| |
|
|
| T |
34434362 |
ttggtttggcataaccatgttccgcttaaagtctctatttttgcttggaggttg |
34434309 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0024 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0024
Description:
Target: scaffold0024; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 57 - 99
Target Start/End: Original strand, 87248 - 87290
Alignment:
| Q |
57 |
tttggcacaaacatgttcccctcaaggtgtctatttttgcttg |
99 |
Q |
| |
|
||||||||||||| ||||| || |||||||||||||||||||| |
|
|
| T |
87248 |
tttggcacaaacaggttccgcttaaggtgtctatttttgcttg |
87290 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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