View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15960_low_46 (Length: 299)
Name: NF15960_low_46
Description: NF15960
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15960_low_46 |
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Alignment Details
Target: chr7 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 50 - 281
Target Start/End: Original strand, 28724030 - 28724261
Alignment:
| Q |
50 |
gatactattaagagtattataagatatttttcttttgagggaataaaatattataagatannnnnnngagaggaaaatattgtttaactattgaacgtca |
149 |
Q |
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| T |
28724030 |
gatactattaagagtattataagatatttttcttttgagggaataaaatattataagatatttttttgagaggaaaatattgtttaactattgaacgtca |
28724129 |
T |
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| Q |
150 |
acatttttgctataattggtatacctcctctttgcctctttcctaaaatcacccaacctatctcctccctaaacctctcattccctccacagtcccctag |
249 |
Q |
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||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28724130 |
acattttggctataattggtatacctcctctttgcctctttcctaaaatcacccaacctatctcctccctaaacctctcattccctccacagtcccctag |
28724229 |
T |
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| Q |
250 |
tagttggtctatccttgtccttacgatctcta |
281 |
Q |
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|||||||||||||||||||||||||||||||| |
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| T |
28724230 |
tagttggtctatccttgtccttacgatctcta |
28724261 |
T |
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