View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15961_high_4 (Length: 524)

Name: NF15961_high_4
Description: NF15961
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15961_high_4
NF15961_high_4
[»] chr3 (54 HSPs)
chr3 (305-512)||(6110064-6110271)
chr3 (305-512)||(10572592-10572799)
chr3 (305-512)||(15600884-15601091)
chr3 (305-512)||(15607429-15607636)
chr3 (308-512)||(13211305-13211509)
chr3 (305-512)||(13248607-13248814)
chr3 (307-512)||(16482483-16482688)
chr3 (311-512)||(17781118-17781319)
chr3 (311-512)||(10579355-10579556)
chr3 (307-512)||(18522665-18522870)
chr3 (305-512)||(15357586-15357793)
chr3 (305-491)||(8490488-8490674)
chr3 (307-512)||(18519980-18520182)
chr3 (311-512)||(19089745-19089946)
chr3 (307-512)||(17200184-17200389)
chr3 (324-512)||(15342219-15342407)
chr3 (307-512)||(13516813-13517018)
chr3 (305-466)||(18640792-18640953)
chr3 (311-512)||(32056900-32057101)
chr3 (311-512)||(1647521-1647726)
chr3 (307-493)||(16200128-16200313)
chr3 (305-497)||(29924971-29925163)
chr3 (305-497)||(29974124-29974316)
chr3 (307-493)||(16200434-16200619)
chr3 (312-512)||(24253388-24253589)
chr3 (411-512)||(17136465-17136566)
chr3 (307-369)||(18534758-18534820)
chr3 (212-269)||(6109971-6110028)
chr3 (212-269)||(13248514-13248571)
chr3 (213-269)||(8490396-8490452)
chr3 (211-269)||(13211209-13211267)
chr3 (213-269)||(18640989-18641045)
chr3 (213-269)||(17136137-17136193)
chr3 (213-263)||(10579603-10579653)
chr3 (212-269)||(15607672-15607730)
chr3 (212-269)||(15351237-15351294)
chr3 (212-269)||(15357829-15357886)
chr3 (212-269)||(17200427-17200484)
chr3 (307-352)||(18510924-18510969)
chr3 (213-269)||(16482727-16482782)
chr3 (213-269)||(18519885-18519941)
chr3 (212-263)||(10572840-10572891)
chr3 (211-269)||(13516717-13516775)
chr3 (212-269)||(15601127-15601185)
chr3 (212-269)||(17781358-17781415)
chr3 (212-269)||(19089985-19090042)
chr3 (213-269)||(1647768-1647824)
chr3 (213-269)||(32057144-32057200)
chr3 (69-172)||(23046330-23046433)
chr3 (212-269)||(18510828-18510885)
chr3 (212-269)||(18522569-18522626)
chr3 (212-269)||(18534662-18534719)
chr3 (213-269)||(29924879-29924935)
chr3 (213-269)||(29974032-29974088)
[»] scaffold0234 (4 HSPs)
scaffold0234 (305-512)||(2321-2528)
scaffold0234 (305-512)||(11212-11419)
scaffold0234 (212-269)||(2564-2621)
scaffold0234 (212-269)||(11455-11512)
[»] chr4 (50 HSPs)
chr4 (305-512)||(19926760-19926967)
chr4 (305-512)||(26970463-26970670)
chr4 (305-512)||(26963640-26963847)
chr4 (305-512)||(55612683-55612890)
chr4 (305-512)||(868597-868804)
chr4 (305-512)||(5707320-5707527)
chr4 (307-512)||(18262214-18262419)
chr4 (305-512)||(5713948-5714155)
chr4 (305-512)||(10621333-10621540)
chr4 (305-512)||(10628412-10628619)
chr4 (307-512)||(18269070-18269280)
chr4 (307-512)||(28393134-28393339)
chr4 (307-512)||(4426604-4426808)
chr4 (317-512)||(8845215-8845410)
chr4 (317-512)||(8858179-8858374)
chr4 (19-193)||(22339490-22339664)
chr4 (305-420)||(12357136-12357251)
chr4 (313-512)||(20311299-20311499)
chr4 (307-511)||(5616215-5616421)
chr4 (311-512)||(10677555-10677753)
chr4 (311-512)||(10891195-10891393)
chr4 (311-497)||(5668140-5668327)
chr4 (311-398)||(35223576-35223663)
chr4 (212-269)||(5713855-5713912)
chr4 (212-269)||(26963547-26963604)
chr4 (212-269)||(26970370-26970427)
chr4 (213-269)||(19927003-19927059)
chr4 (212-269)||(10621576-10621633)
chr4 (213-269)||(5707228-5707284)
chr4 (213-269)||(12357044-12357100)
chr4 (215-269)||(868507-868561)
chr4 (213-269)||(10628655-10628711)
chr4 (213-269)||(17142372-17142428)
chr4 (213-269)||(55612594-55612650)
chr4 (213-267)||(28393380-28393434)
chr4 (69-147)||(50882036-50882114)
chr4 (212-269)||(18268975-18269032)
chr4 (213-269)||(4426847-4426903)
chr4 (69-147)||(16635416-16635494)
chr4 (354-421)||(39074278-39074346)
chr4 (220-269)||(55992680-55992729)
chr4 (228-269)||(5668371-5668412)
chr4 (221-269)||(8845118-8845166)
chr4 (221-269)||(8858082-8858130)
chr4 (229-269)||(18262136-18262176)
chr4 (331-414)||(21454235-21454319)
chr4 (355-414)||(11161913-11161972)
chr4 (215-269)||(20311207-20311261)
chr4 (419-512)||(35223674-35223767)
chr4 (221-269)||(24699958-24700006)
[»] chr1 (28 HSPs)
chr1 (305-512)||(18252030-18252237)
chr1 (305-512)||(18532514-18532721)
chr1 (305-512)||(27131409-27131616)
chr1 (307-512)||(21171233-21171438)
chr1 (307-512)||(27310577-27310782)
chr1 (307-512)||(16359035-16359240)
chr1 (311-512)||(36816633-36816834)
chr1 (305-512)||(3855919-3856126)
chr1 (305-512)||(22657221-22657429)
chr1 (311-512)||(27277557-27277756)
chr1 (213-269)||(18251936-18251992)
chr1 (213-269)||(18532757-18532813)
chr1 (339-497)||(12006554-12006712)
chr1 (339-512)||(12014284-12014457)
chr1 (213-269)||(27310821-27310877)
chr1 (213-269)||(16359280-16359336)
chr1 (317-502)||(9917928-9918106)
chr1 (212-269)||(21171479-21171536)
chr1 (69-133)||(7589224-7589288)
chr1 (212-266)||(36816881-36816935)
chr1 (212-269)||(3856164-3856221)
chr1 (212-265)||(22657469-22657522)
chr1 (311-380)||(30720625-30720694)
chr1 (213-269)||(27131652-27131704)
chr1 (69-171)||(24067860-24067962)
chr1 (335-412)||(3403248-3403325)
chr1 (335-412)||(3443494-3443571)
chr1 (213-269)||(27277800-27277856)
[»] scaffold0220 (2 HSPs)
scaffold0220 (305-512)||(18288-18495)
scaffold0220 (213-269)||(18196-18252)
[»] chr7 (28 HSPs)
chr7 (305-512)||(29327784-29327991)
chr7 (305-512)||(11536062-11536269)
chr7 (305-512)||(11542980-11543187)
chr7 (307-512)||(15152445-15152650)
chr7 (307-512)||(15148144-15148349)
chr7 (307-512)||(18561009-18561214)
chr7 (307-512)||(12750828-12751033)
chr7 (311-508)||(12738542-12738739)
chr7 (307-497)||(18257857-18258047)
chr7 (311-493)||(13392157-13392338)
chr7 (327-512)||(2364917-2365101)
chr7 (212-269)||(11543223-11543280)
chr7 (213-269)||(2653275-2653331)
chr7 (213-269)||(12738443-12738499)
chr7 (311-398)||(39111819-39111905)
chr7 (212-269)||(11536305-11536362)
chr7 (212-269)||(12750732-12750789)
chr7 (212-269)||(15152349-15152406)
chr7 (212-268)||(29327689-29327745)
chr7 (338-497)||(7396221-7396381)
chr7 (213-269)||(15148049-15148105)
chr7 (212-268)||(13392029-13392085)
chr7 (379-422)||(3132748-3132791)
chr7 (355-420)||(10234179-10234244)
chr7 (213-269)||(18258087-18258143)
chr7 (305-337)||(2653207-2653239)
chr7 (213-269)||(18560913-18560969)
chr7 (69-133)||(7157465-7157529)
[»] chr6 (29 HSPs)
chr6 (305-512)||(27381252-27381459)
chr6 (305-512)||(27471635-27471842)
chr6 (307-512)||(17684469-17684674)
chr6 (305-512)||(29308890-29309097)
chr6 (305-512)||(29315850-29316057)
chr6 (307-512)||(16566320-16566525)
chr6 (305-512)||(17691440-17691647)
chr6 (307-512)||(188977-189182)
chr6 (307-512)||(25537159-25537364)
chr6 (307-512)||(11651725-11651930)
chr6 (307-512)||(13359269-13359474)
chr6 (344-512)||(20553587-20553755)
chr6 (215-269)||(17691683-17691737)
chr6 (212-269)||(27381495-27381552)
chr6 (212-269)||(27471878-27471935)
chr6 (212-269)||(29308797-29308854)
chr6 (212-269)||(29315757-29315814)
chr6 (212-269)||(17684712-17684769)
chr6 (328-512)||(27925772-27925961)
chr6 (213-267)||(11651630-11651684)
chr6 (212-269)||(25537405-25537462)
chr6 (324-497)||(8509941-8510115)
chr6 (343-512)||(17850495-17850663)
chr6 (312-367)||(31258065-31258120)
chr6 (212-269)||(13359512-13359569)
chr6 (221-269)||(16566563-16566611)
chr6 (213-269)||(189221-189280)
chr6 (227-269)||(16394484-16394526)
chr6 (321-386)||(22259925-22259990)
[»] scaffold0390 (4 HSPs)
scaffold0390 (305-512)||(6934-7141)
scaffold0390 (305-512)||(13950-14157)
scaffold0390 (212-269)||(7177-7234)
scaffold0390 (213-269)||(14193-14249)
[»] chr8 (19 HSPs)
chr8 (305-512)||(21940665-21940872)
chr8 (307-502)||(28554885-28555080)
chr8 (307-512)||(22171491-22171694)
chr8 (311-512)||(6094129-6094330)
chr8 (311-512)||(24642655-24642856)
chr8 (311-438)||(24636860-24636987)
chr8 (213-269)||(21940573-21940629)
chr8 (213-269)||(22070108-22070164)
chr8 (212-269)||(22171395-22171452)
chr8 (212-265)||(24642555-24642608)
chr8 (213-269)||(6094031-6094087)
chr8 (212-269)||(28554790-28554847)
chr8 (335-496)||(32872857-32873019)
chr8 (69-147)||(40755860-40755938)
chr8 (317-509)||(38232380-38232570)
chr8 (326-384)||(2375027-2375085)
chr8 (343-406)||(10920234-10920297)
chr8 (212-266)||(2374946-2375000)
chr8 (213-250)||(24636605-24636642)
[»] chr2 (12 HSPs)
chr2 (305-512)||(21330248-21330455)
chr2 (305-512)||(18796506-18796713)
chr2 (307-502)||(18619807-18620001)
chr2 (311-450)||(19692598-19692737)
chr2 (370-497)||(20977957-20978084)
chr2 (213-269)||(21330493-21330549)
chr2 (339-512)||(36270199-36270373)
chr2 (339-497)||(18822115-18822275)
chr2 (69-147)||(23689061-23689139)
chr2 (212-269)||(19692773-19692830)
chr2 (212-269)||(18796411-18796470)
chr2 (341-496)||(36802664-36802820)
[»] scaffold0433 (2 HSPs)
scaffold0433 (305-512)||(7107-7314)
scaffold0433 (212-269)||(7014-7071)
[»] chr5 (21 HSPs)
chr5 (305-512)||(24695466-24695673)
chr5 (305-512)||(18569863-18570070)
chr5 (307-512)||(19714498-19714703)
chr5 (311-512)||(19707218-19707419)
chr5 (310-493)||(27347497-27347679)
chr5 (311-497)||(22547031-22547217)
chr5 (305-414)||(39537962-39538071)
chr5 (309-490)||(17285754-17285935)
chr5 (212-269)||(24695709-24695766)
chr5 (311-414)||(31886537-31886640)
chr5 (213-269)||(19714742-19714798)
chr5 (309-490)||(17298907-17299088)
chr5 (212-269)||(19707462-19707519)
chr5 (213-269)||(27347722-27347778)
chr5 (371-512)||(18807034-18807175)
chr5 (418-510)||(39538701-39538793)
chr5 (331-421)||(33477389-33477479)
chr5 (212-269)||(18570108-18570165)
chr5 (213-268)||(39537870-39537925)
chr5 (69-147)||(19183638-19183716)
chr5 (355-423)||(11479420-11479489)
[»] scaffold0657 (2 HSPs)
scaffold0657 (305-512)||(993-1200)
scaffold0657 (213-269)||(901-957)
[»] scaffold0186 (2 HSPs)
scaffold0186 (305-512)||(25990-26197)
scaffold0186 (212-268)||(26231-26287)
[»] scaffold0063 (2 HSPs)
scaffold0063 (307-512)||(5531-5736)
scaffold0063 (212-269)||(5435-5492)
[»] scaffold0008 (2 HSPs)
scaffold0008 (307-488)||(230365-230545)
scaffold0008 (213-269)||(230584-230640)
[»] scaffold0176 (2 HSPs)
scaffold0176 (305-369)||(8446-8510)
scaffold0176 (212-269)||(8546-8603)
[»] scaffold0203 (1 HSPs)
scaffold0203 (212-269)||(23769-23826)
[»] scaffold0326 (2 HSPs)
scaffold0326 (212-269)||(16522-16579)
scaffold0326 (305-338)||(16615-16648)
[»] scaffold0705 (1 HSPs)
scaffold0705 (212-269)||(41-98)
[»] scaffold0637 (1 HSPs)
scaffold0637 (213-269)||(8944-9000)
[»] scaffold0565 (2 HSPs)
scaffold0565 (215-269)||(10202-10256)
scaffold0565 (324-355)||(10127-10158)
[»] scaffold0767 (1 HSPs)
scaffold0767 (213-249)||(1-37)
[»] scaffold0267 (1 HSPs)
scaffold0267 (69-145)||(8615-8691)
[»] scaffold0170 (1 HSPs)
scaffold0170 (212-265)||(5877-5930)
[»] scaffold0650 (1 HSPs)
scaffold0650 (72-147)||(6516-6591)
[»] scaffold0032 (1 HSPs)
scaffold0032 (334-406)||(92194-92267)
[»] scaffold0453 (1 HSPs)
scaffold0453 (69-133)||(9396-9460)


Alignment Details
Target: chr3 (Bit Score: 200; Significance: 1e-109; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 305 - 512
Target Start/End: Original strand, 6110064 - 6110271
Alignment:
Q  305 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 404  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6110064 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 6110163  T
Q  405 accccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaa 504  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  6110164 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 6110263  T
Q  505 ctgatgat 512  Q
    ||||||||    
T  6110264 ctgatgat 6110271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 305 - 512
Target Start/End: Complemental strand, 10572799 - 10572592
Alignment:
Q  305 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 404  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10572799 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 10572700  T
Q  405 accccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaa 504  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  10572699 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 10572600  T
Q  505 ctgatgat 512  Q
    ||||||||    
T  10572599 ctgatgat 10572592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 305 - 512
Target Start/End: Complemental strand, 15601091 - 15600884
Alignment:
Q  305 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 404  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15601091 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 15600992  T
Q  405 accccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaa 504  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  15600991 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 15600892  T
Q  505 ctgatgat 512  Q
    ||||||||    
T  15600891 ctgatgat 15600884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 305 - 512
Target Start/End: Complemental strand, 15607636 - 15607429
Alignment:
Q  305 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 404  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15607636 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 15607537  T
Q  405 accccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaa 504  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  15607536 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 15607437  T
Q  505 ctgatgat 512  Q
    ||||||||    
T  15607436 ctgatgat 15607429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 193; E-Value: 1e-104
Query Start/End: Original strand, 308 - 512
Target Start/End: Original strand, 13211305 - 13211509
Alignment:
Q  308 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 407  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13211305 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 13211404  T
Q  408 ccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaactg 507  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  13211405 ccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgagatatcattaaagcatagagactattatgtaggtagactg 13211504  T
Q  508 atgat 512  Q
    |||||    
T  13211505 atgat 13211509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 305 - 512
Target Start/End: Original strand, 13248607 - 13248814
Alignment:
Q  305 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 404  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13248607 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 13248706  T
Q  405 accccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaa 504  Q
    |||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| |    
T  13248707 accccattaaacataaggaaactattctcaaagtattcgtagtcaagctttgttgagaagtgggataacattaaagcatagagactattatgtaggtaga 13248806  T
Q  505 ctgatgat 512  Q
    ||||||||    
T  13248807 ctgatgat 13248814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 307 - 512
Target Start/End: Complemental strand, 16482688 - 16482483
Alignment:
Q  307 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 406  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16482688 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 16482589  T
Q  407 cccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaact 506  Q
    |||||||||||||||||||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| |||    
T  16482588 cccattaaacataaggaaactactctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 16482489  T
Q  507 gatgat 512  Q
    ||||||    
T  16482488 gatgat 16482483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 311 - 512
Target Start/End: Complemental strand, 17781319 - 17781118
Alignment:
Q  311 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 410  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17781319 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 17781220  T
Q  411 ttaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaactgatg 510  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  17781219 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatg 17781120  T
Q  511 at 512  Q
    ||    
T  17781119 at 17781118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 311 - 512
Target Start/End: Complemental strand, 10579556 - 10579355
Alignment:
Q  311 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 410  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  10579556 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgttaaatggaacattaagtataacttaattgtgagacccca 10579457  T
Q  411 ttaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaactgatg 510  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||    
T  10579456 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgagatatcattaaagcatagagactattatgtaggtagactgatg 10579357  T
Q  511 at 512  Q
    ||    
T  10579356 at 10579355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 307 - 512
Target Start/End: Original strand, 18522665 - 18522870
Alignment:
Q  307 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 406  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18522665 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 18522764  T
Q  407 cccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaact 506  Q
    |||||||||||||||||||||||||| |||||||||||||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||||| |||    
T  18522765 cccattaaacataaggaaactattcttaaagtatccgtagtcaagctttattgagaagtgggatatcatttaagcatagagactattatgtaggtagact 18522864  T
Q  507 gatgat 512  Q
    ||||||    
T  18522865 gatgat 18522870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 180; E-Value: 6e-97
Query Start/End: Original strand, 305 - 512
Target Start/End: Complemental strand, 15357793 - 15357586
Alignment:
Q  305 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 404  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  15357793 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctagattagttagtccgtttaatggaacattaagtataacttaattgtgag 15357694  T
Q  405 accccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaa 504  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||||||||| |||||||||||||||||||||| |    
T  15357693 accccattaaacataaggaacctattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaaacatagagactattatgtaggtaga 15357594  T
Q  505 ctgatgat 512  Q
    ||||||||    
T  15357593 ctgatgat 15357586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 175; E-Value: 5e-94
Query Start/End: Original strand, 305 - 491
Target Start/End: Original strand, 8490488 - 8490674
Alignment:
Q  305 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 404  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  8490488 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 8490587  T
Q  405 accccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagacta 491  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||    
T  8490588 accccattaaacataaggaaactattctcaaagtatctgtagtcaagctttgttgagaagtgggatatcattaaagcatagagacta 8490674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 307 - 512
Target Start/End: Original strand, 18519980 - 18520182
Alignment:
Q  307 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 406  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18519980 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 18520079  T
Q  407 cccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaact 506  Q
    ||| |||||||||||||||||||||| ||   ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| |||    
T  18520080 cccgttaaacataaggaaactattcttaa---atccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 18520176  T
Q  507 gatgat 512  Q
    ||||||    
T  18520177 gatgat 18520182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 170; E-Value: 5e-91
Query Start/End: Original strand, 311 - 512
Target Start/End: Complemental strand, 19089946 - 19089745
Alignment:
Q  311 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 410  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||     
T  19089946 catttctttattgattttgttttgtttcaaaataataaagtccctagattagttagtccgtttaatggaacattaagtataacttaattgtgagacccct 19089847  T
Q  411 ttaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaactgatg 510  Q
    |||||||||| ||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||||| |||||||||||||||||||||| |||||||    
T  19089846 ttaaacataatgaaactattcttaaagtatccgtagtcaagctttattgagaagtgggatatcattaaatcatagagactattatgtaggtagactgatg 19089747  T
Q  511 at 512  Q
    ||    
T  19089746 at 19089745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 307 - 512
Target Start/End: Complemental strand, 17200389 - 17200184
Alignment:
Q  307 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 406  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  17200389 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgatac 17200290  T
Q  407 cccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaact 506  Q
    ||| |||||||||| ||||||||||| |||||||||||||| ||| ||| |||||| ||| |||||||||||||||||||||||||||||| |||| |||    
T  17200289 ccctttaaacataatgaaactattcttaaagtatccgtagttaagctttattgagatgtgtgatatcattaaagcatagagactattatgtgggtagact 17200190  T
Q  507 gatgat 512  Q
    ||||||    
T  17200189 gatgat 17200184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 324 - 512
Target Start/End: Complemental strand, 15342407 - 15342219
Alignment:
Q  324 attttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaacataagga 423  Q
    ||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15342407 attttgttttgtttcaaaataataaagtccctagaatagtttgttcgtttaatggaacattaagtataacttaattgtgagaccccattaaacataagga 15342308  T
Q  424 aactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaactgatgat 512  Q
    | |||||||||||||||||||||||||| ||| ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||    
T  15342307 acctattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaaacatagagactattatgtaggtagactgatgat 15342219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 158; E-Value: 8e-84
Query Start/End: Original strand, 307 - 512
Target Start/End: Original strand, 13516813 - 13517018
Alignment:
Q  307 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 406  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  13516813 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttcatggaacattaagtataacttaattgtgagac 13516912  T
Q  407 cccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaact 506  Q
    ||| |||||||||||||||| ||||| |||||||| ||||||||| ||| ||||||||| |||||||||||||||| |||||||||||||| |||| |||    
T  13516913 cccgttaaacataaggaaacgattcttaaagtatctgtagtcaagctttattgagaagtaggatatcattaaagcacagagactattatgtgggtagact 13517012  T
Q  507 gatgat 512  Q
    ||||||    
T  13517013 gatgat 13517018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 150; E-Value: 5e-79
Query Start/End: Original strand, 305 - 466
Target Start/End: Complemental strand, 18640953 - 18640792
Alignment:
Q  305 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 404  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  18640953 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 18640854  T
Q  405 accccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtg 466  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  18640853 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtg 18640792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 311 - 512
Target Start/End: Complemental strand, 32057101 - 32056900
Alignment:
Q  311 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 410  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||||| |||||||     
T  32057101 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacatcaagtataactttattgtaagaccccg 32057002  T
Q  411 ttaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaactgatg 510  Q
    |||||||||| ||||||||||| ||||| |||||||||||  ||| ||||||||||||||||||||||||||||||||||||||||| |||| ||| |||    
T  32057001 ttaaacataaagaaactattcttaaagtgtccgtagtcaaactttattgagaagtgggatatcattaaagcatagagactattatgtgggtagactaatg 32056902  T
Q  511 at 512  Q
    ||    
T  32056901 at 32056900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 311 - 512
Target Start/End: Complemental strand, 1647726 - 1647521
Alignment:
Q  311 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagta----taacttaattgtgagac 406  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    |||||||||||||||||    
T  1647726 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataattaacttaattgtgagac 1647627  T
Q  407 cccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaact 506  Q
    ||| |||||||||||||||||||| | |||||||||||| ||||| ||| |||||||  ||||||| |||||||||||||||||||||||| | || |||    
T  1647626 cccgttaaacataaggaaactatttttaaagtatccgtaatcaagctttattgagaaaagggatataattaaagcatagagactattatgtggatagact 1647527  T
Q  507 gatgat 512  Q
    ||||||    
T  1647526 gatgat 1647521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 307 - 493
Target Start/End: Original strand, 16200128 - 16200313
Alignment:
Q  307 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 406  Q
    ||||||||||||  ||| |||| |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  16200128 aaggcatttcttcgttg-ttttattttgtttcaaaataataaagtccttagaatagttagttcgtttaatggaacattatgtataacttaattgtgagac 16200226  T
Q  407 cccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactatt 493  Q
    ||||||||||||||||| | |||||| ||||||| |||||||||| ||| ||| ||||||||||||||||||||||| |||||||||    
T  16200227 cccattaaacataaggacattattcttaaagtattcgtagtcaagatttattgtgaagtgggatatcattaaagcatggagactatt 16200313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 305 - 497
Target Start/End: Original strand, 29924971 - 29925163
Alignment:
Q  305 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 404  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||  ||||||||||| |||||||||||    
T  29924971 acaagacatttctttattgattttgttttgtttcaaaataataaagcccctaaaatagttagtccgtttaatggattattaagtataatttaattgtgag 29925070  T
Q  405 accccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgt 497  Q
    ||||||||||| ||||||| | |||||| ||| |||  ||||||||| ||| ||| |||||| |||||||||||||||| ||| |||||||||    
T  29925071 accccattaaatataaggacattattcttaaaatatatgtagtcaagctttattgtgaagtgagatatcattaaagcatggaggctattatgt 29925163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 305 - 497
Target Start/End: Original strand, 29974124 - 29974316
Alignment:
Q  305 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 404  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||  ||||||||||| |||||||||||    
T  29974124 acaagacatttctttattgattttgttttgtttcaaaataataaagcccctaaaatagttagtccgtttaatggattattaagtataatttaattgtgag 29974223  T
Q  405 accccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgt 497  Q
    ||||||||||| ||||||| | |||||| ||| |||  ||||||||| ||| ||| |||||| |||||||||||||||| ||| |||||||||    
T  29974224 accccattaaatataaggacattattcttaaaatatatgtagtcaagctttattgtgaagtgagatatcattaaagcatggaggctattatgt 29974316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 307 - 493
Target Start/End: Original strand, 16200434 - 16200619
Alignment:
Q  307 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 406  Q
    ||||||||||||  ||| |||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  16200434 aaggcatttcttcgttg-ttttattttgtttcaaaataataaagtccttagaatagttagtccgtttaatggaacattatgtataacttaattgtgagac 16200532  T
Q  407 cccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactatt 493  Q
     ||| |||||||||||| | |||||| ||||||| |||||||||| ||| ||| |||||||||| ||||||||||||  ||||||||    
T  16200533 tccaataaacataaggacattattcttaaagtattcgtagtcaagatttattgtgaagtgggatgtcattaaagcatgaagactatt 16200619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 312 - 512
Target Start/End: Complemental strand, 24253589 - 24253388
Alignment:
Q  312 atttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgaga-cccca 410  Q
    ||||||||||||||||||||||  |||||||||||||||||| |||||||| | || ||||| |||||||||||||||| ||||||| |||||| |||||    
T  24253589 atttctttattgattttgttttacttcaaaataataaagtccttagaatagctcgttcgtttgatggaacattaagtatgacttaatcgtgagatcccca 24253490  T
Q  411 ttaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaactgatg 510  Q
    | ||||||||||| |||||||| |||||||  || |||||  ||| |||  ||||| | || ||||||||||||||||||||||||| |||| ||| |||    
T  24253489 tcaaacataaggacactattcttaaagtatatgtggtcaaaatttattgtaaagtgaggtaacattaaagcatagagactattatgtcggtagactaatg 24253390  T
Q  511 at 512  Q
    ||    
T  24253389 at 24253388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 411 - 512
Target Start/End: Original strand, 17136465 - 17136566
Alignment:
Q  411 ttaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaactgatg 510  Q
    |||||||||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||||| ||||||||||||||||| |||| |||||||    
T  17136465 ttaaacataaggaaactattcttaaagtatccgtagtcaagctttattgagaagtgggatatcattaaaacatagagactattatgtgggtagactgatg 17136564  T
Q  511 at 512  Q
    ||    
T  17136565 at 17136566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 307 - 369
Target Start/End: Original strand, 18534758 - 18534820
Alignment:
Q  307 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtcc 369  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  18534758 aaggcatttctttattgattttgttttgtttcaaaataataaagtccatagaatagttagtcc 18534820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 212 - 269
Target Start/End: Original strand, 6109971 - 6110028
Alignment:
Q  212 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 269  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6109971 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 6110028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 212 - 269
Target Start/End: Original strand, 13248514 - 13248571
Alignment:
Q  212 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 269  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13248514 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 13248571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 213 - 269
Target Start/End: Original strand, 8490396 - 8490452
Alignment:
Q  213 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 269  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8490396 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 8490452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 211 - 269
Target Start/End: Original strand, 13211209 - 13211267
Alignment:
Q  211 cttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 269  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  13211209 cttgttggaataagccctaatagccaatctatattgattgggtttggttttgtatcatg 13211267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 213 - 269
Target Start/End: Complemental strand, 18641045 - 18640989
Alignment:
Q  213 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 269  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  18641045 tgttggaataagccctaatagccaatctatattgattgtgtttggctttgtatcatg 18640989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 213 - 269
Target Start/End: Original strand, 17136137 - 17136193
Alignment:
Q  213 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 269  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  17136137 tgttggagtaagccctaatagccaatctatattgattgagtttggctttgtatcatg 17136193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 213 - 263
Target Start/End: Complemental strand, 10579653 - 10579603
Alignment:
Q  213 tgttggaataagccctaatagccaatctatattgattgggtttggctttgt 263  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  10579653 tgttggaataagccctaatagccaatctatattgattgggtttgactttgt 10579603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 212 - 269
Target Start/End: Complemental strand, 15607730 - 15607672
Alignment:
Q  212 ttgttggaataagccctaatagccaatctata-ttgattgggtttggctttgtatcatg 269  Q
    |||||||||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  15607730 ttgttggaataagccctaatagccaatctatattttattgggtttggctttgtatcatg 15607672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 212 - 269
Target Start/End: Complemental strand, 15351294 - 15351237
Alignment:
Q  212 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 269  Q
    |||||||||||||||||||||||||||||||| ||||||  |||||||||||||||||    
T  15351294 ttgttggaataagccctaatagccaatctataatgattgattttggctttgtatcatg 15351237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 212 - 269
Target Start/End: Complemental strand, 15357886 - 15357829
Alignment:
Q  212 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 269  Q
    |||||||||||||||||||||||||||||||| ||||||  |||||||||||||||||    
T  15357886 ttgttggaataagccctaatagccaatctataatgattgattttggctttgtatcatg 15357829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 212 - 269
Target Start/End: Complemental strand, 17200484 - 17200427
Alignment:
Q  212 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 269  Q
    |||||||| |||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  17200484 ttgttggagtaagccctaatagccaatctatgttgattgggtttggctttgtagcatg 17200427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 307 - 352
Target Start/End: Original strand, 18510924 - 18510969
Alignment:
Q  307 aaggcatttctttattgattttgttttgtttcaaaataataaagtc 352  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  18510924 aaggcatttctttattgattttgttttgtttcaaaataataaagtc 18510969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 213 - 269
Target Start/End: Complemental strand, 16482782 - 16482727
Alignment:
Q  213 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 269  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  16482782 tgttagaataagccctaata-ccaatctatattgattgggtttggctttgtatcatg 16482727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 213 - 269
Target Start/End: Original strand, 18519885 - 18519941
Alignment:
Q  213 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 269  Q
    ||||||| |||| |||||||||||||||||||||||||||||||| |||||||||||    
T  18519885 tgttggagtaagtcctaatagccaatctatattgattgggtttggttttgtatcatg 18519941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 212 - 263
Target Start/End: Complemental strand, 10572891 - 10572840
Alignment:
Q  212 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgt 263  Q
    |||||||||||||||||||||||||| |||||||||||||||||| ||||||    
T  10572891 ttgttggaataagccctaatagccaacctatattgattgggtttgactttgt 10572840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 211 - 269
Target Start/End: Original strand, 13516717 - 13516775
Alignment:
Q  211 cttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 269  Q
    ||||||||| |||||||||||||||||||||| ||||||| |||||||| |||||||||    
T  13516717 cttgttggagtaagccctaatagccaatctatgttgattgagtttggctgtgtatcatg 13516775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 212 - 269
Target Start/End: Complemental strand, 15601185 - 15601127
Alignment:
Q  212 ttgttggaataagccctaatagccaatctata-ttgattgggtttggctttgtatcatg 269  Q
    |||||||||||||||||||||||||||||||| || ||||||||||| |||||||||||    
T  15601185 ttgttggaataagccctaatagccaatctatattttattgggtttggatttgtatcatg 15601127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 212 - 269
Target Start/End: Complemental strand, 17781415 - 17781358
Alignment:
Q  212 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 269  Q
    |||||||| |||||||||||||||||||||||||||||| |||||| ||| |||||||    
T  17781415 ttgttggagtaagccctaatagccaatctatattgattgagtttggttttatatcatg 17781358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 212 - 269
Target Start/End: Complemental strand, 19090042 - 19089985
Alignment:
Q  212 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 269  Q
    |||||||| |||||||||||||||||||||||||||||| |||||| ||| |||||||    
T  19090042 ttgttggagtaagccctaatagccaatctatattgattgagtttggttttatatcatg 19089985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 213 - 269
Target Start/End: Complemental strand, 1647824 - 1647768
Alignment:
Q  213 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 269  Q
    ||||||| ||||||||||||||   ||||||||||||||||||||||||||||||||    
T  1647824 tgttggagtaagccctaatagctggtctatattgattgggtttggctttgtatcatg 1647768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 213 - 269
Target Start/End: Complemental strand, 32057200 - 32057144
Alignment:
Q  213 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 269  Q
    ||||||| ||||| |||||||||||||||| ||||||||||||| ||||||||||||    
T  32057200 tgttggagtaagctctaatagccaatctatgttgattgggtttgactttgtatcatg 32057144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 69 - 172
Target Start/End: Complemental strand, 23046433 - 23046330
Alignment:
Q  69 aaatagacacacaaaatcagcataactttgcaaggatctataaaatcgagatcaaaacatgtgtacgtcaagctaaaatggtaatacatcttaagtgtta 168  Q
    |||||||||||||| | || |||||| ||||||  ||||||||||||||||| |||| ||||||| ||| |||||||||  || | ||| ||| ||||||    
T  23046433 aaatagacacacaataccaacataacattgcaaaaatctataaaatcgagataaaaaaatgtgtaagtcgagctaaaataatattgcattttacgtgtta 23046334  T
Q  169 tcac 172  Q
    ||||    
T  23046333 tcac 23046330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 212 - 269
Target Start/End: Original strand, 18510828 - 18510885
Alignment:
Q  212 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 269  Q
    |||||||| |||||||||||| ||||||||||||||||| |||||  |||||||||||    
T  18510828 ttgttggagtaagccctaatatccaatctatattgattgagtttgattttgtatcatg 18510885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 212 - 269
Target Start/End: Original strand, 18522569 - 18522626
Alignment:
Q  212 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 269  Q
    |||||||| |||||||||||| ||||||||||||||||| |||||  |||||||||||    
T  18522569 ttgttggagtaagccctaatatccaatctatattgattgagtttgattttgtatcatg 18522626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 212 - 269
Target Start/End: Original strand, 18534662 - 18534719
Alignment:
Q  212 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 269  Q
    |||||| | ||||||||||||| |||||||||||||||| |||||| |||||||||||    
T  18534662 ttgttgtagtaagccctaatagtcaatctatattgattgagtttggttttgtatcatg 18534719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 213 - 269
Target Start/End: Original strand, 29924879 - 29924935
Alignment:
Q  213 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 269  Q
    ||||||| ||||||||||||| | |||||||||||||| ||||| | ||||||||||    
T  29924879 tgttggagtaagccctaatagtcgatctatattgattgagtttgacattgtatcatg 29924935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 213 - 269
Target Start/End: Original strand, 29974032 - 29974088
Alignment:
Q  213 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 269  Q
    ||||||| ||||||||||||| | |||||||||||||| ||||| | ||||||||||    
T  29974032 tgttggagtaagccctaatagtcgatctatattgattgagtttgacattgtatcatg 29974088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234 (Bit Score: 196; Significance: 1e-106; HSPs: 4)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 305 - 512
Target Start/End: Complemental strand, 2528 - 2321
Alignment:
Q  305 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 404  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2528 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 2429  T
Q  405 accccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaa 504  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| |    
T  2428 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 2329  T
Q  505 ctgatgat 512  Q
    ||||||||    
T  2328 ctgatgat 2321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234; HSP #2
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 305 - 512
Target Start/End: Complemental strand, 11419 - 11212
Alignment:
Q  305 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 404  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11419 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 11320  T
Q  405 accccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaa 504  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| |    
T  11319 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 11220  T
Q  505 ctgatgat 512  Q
    ||||||||    
T  11219 ctgatgat 11212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234; HSP #3
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 212 - 269
Target Start/End: Complemental strand, 2621 - 2564
Alignment:
Q  212 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 269  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2621 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 2564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234; HSP #4
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 212 - 269
Target Start/End: Complemental strand, 11512 - 11455
Alignment:
Q  212 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 269  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11512 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 11455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 196; Significance: 1e-106; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 305 - 512
Target Start/End: Complemental strand, 19926967 - 19926760
Alignment:
Q  305 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 404  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19926967 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 19926868  T
Q  405 accccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaa 504  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| |    
T  19926867 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 19926768  T
Q  505 ctgatgat 512  Q
    ||||||||    
T  19926767 ctgatgat 19926760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 305 - 512
Target Start/End: Original strand, 26970463 - 26970670
Alignment:
Q  305 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 404  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26970463 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 26970562  T
Q  405 accccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaa 504  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| |    
T  26970563 accccattaaacataaggaaactattctcaaagtatccgtagtcaagatttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 26970662  T
Q  505 ctgatgat 512  Q
    ||||||||    
T  26970663 ctgatgat 26970670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 305 - 512
Target Start/End: Original strand, 26963640 - 26963847
Alignment:
Q  305 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 404  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  26963640 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaaatataacttaattgtgag 26963739  T
Q  405 accccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaa 504  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| |    
T  26963740 accccattaaacataaggaaactattctcaaagtatccgtagtcaagatttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 26963839  T
Q  505 ctgatgat 512  Q
    ||||||||    
T  26963840 ctgatgat 26963847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 305 - 512
Target Start/End: Original strand, 55612683 - 55612890
Alignment:
Q  305 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 404  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55612683 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 55612782  T
Q  405 accccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaa 504  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| |    
T  55612783 accccattaaacataaggaaactactctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 55612882  T
Q  505 ctgatgat 512  Q
    ||||||||    
T  55612883 ctgatgat 55612890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 305 - 512
Target Start/End: Original strand, 868597 - 868804
Alignment:
Q  305 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 404  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  868597 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 868696  T
Q  405 accccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaa 504  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  868697 accccgttaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 868796  T
Q  505 ctgatgat 512  Q
    ||||||||    
T  868797 ctgatgat 868804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 305 - 512
Target Start/End: Original strand, 5707320 - 5707527
Alignment:
Q  305 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 404  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  5707320 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 5707419  T
Q  405 accccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaa 504  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||||||||||||||||||||| |    
T  5707420 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtaggtaga 5707519  T
Q  505 ctgatgat 512  Q
    ||||||||    
T  5707520 ctgatgat 5707527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 307 - 512
Target Start/End: Original strand, 18262214 - 18262419
Alignment:
Q  307 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 406  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18262214 aaggcatttctttattgattttgtttcgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 18262313  T
Q  407 cccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaact 506  Q
    ||| ||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||| |||    
T  18262314 cccgttaaacataaggaaactattctcaaagtatccgtagtcaagctttgatgagaagtgggatatcattaaagcatagagactattatgtaggtagact 18262413  T
Q  507 gatgat 512  Q
    ||||||    
T  18262414 gatgat 18262419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 305 - 512
Target Start/End: Original strand, 5713948 - 5714155
Alignment:
Q  305 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 404  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||    
T  5713948 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagcccatttaatggaacattaagtataacttaattgtgag 5714047  T
Q  405 accccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaa 504  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||||||||||||||||||||| |    
T  5714048 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtaggtaga 5714147  T
Q  505 ctgatgat 512  Q
    ||||||||    
T  5714148 ctgatgat 5714155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 305 - 512
Target Start/End: Complemental strand, 10621540 - 10621333
Alignment:
Q  305 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 404  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  10621540 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctggaatagttagtccgtttaatggaacattaagtataacttaattgtgag 10621441  T
Q  405 accccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaa 504  Q
    | ||||||||||||||||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| |    
T  10621440 agcccattaaacataaggaaactattctcaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 10621341  T
Q  505 ctgatgat 512  Q
    ||||||||    
T  10621340 ctgatgat 10621333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 180; E-Value: 6e-97
Query Start/End: Original strand, 305 - 512
Target Start/End: Complemental strand, 10628619 - 10628412
Alignment:
Q  305 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 404  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  10628619 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctggaatagttagtccgtttaatggaacattaagtataacttaattgtgag 10628520  T
Q  405 accccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaa 504  Q
    | ||||||||||||||||||||||||||||||||||| ||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||| |    
T  10628519 agcccattaaacataaggaaactattctcaaagtatctgtagtcaagctttattgagaagtgggatattattaaagcatagagactattatgtaggtaga 10628420  T
Q  505 ctgatgat 512  Q
    ||||||||    
T  10628419 ctgatgat 10628412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 175; E-Value: 5e-94
Query Start/End: Original strand, 307 - 512
Target Start/End: Original strand, 18269070 - 18269280
Alignment:
Q  307 aaggcatttctttattgatttt-----gttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgt 401  Q
    ||||||||||||||||||||||     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18269070 aaggcatttctttattgattttgttttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgt 18269169  T
Q  402 gagaccccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggt 501  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  18269170 gagaccccgttaaacataaggaaactattctcaaagtatccgtagtcaagctttgatgagaagtgggatatcattaaagcatagagactattatgtaggt 18269269  T
Q  502 aaactgatgat 512  Q
    | |||||||||    
T  18269270 agactgatgat 18269280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 307 - 512
Target Start/End: Complemental strand, 28393339 - 28393134
Alignment:
Q  307 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 406  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  28393339 aaggcatttctttattgattttgatttgtttcaaaataataaagtccctaaaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 28393240  T
Q  407 cccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaact 506  Q
    |||||||||||||||||||||||||| |||||||| ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| |||| |||    
T  28393239 cccattaaacataaggaaactattcttaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtgggtagact 28393140  T
Q  507 gatgat 512  Q
    ||||||    
T  28393139 gatgat 28393134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 170; E-Value: 5e-91
Query Start/End: Original strand, 307 - 512
Target Start/End: Complemental strand, 4426808 - 4426604
Alignment:
Q  307 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 406  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4426808 aaggcatttctttattgattttgttttgtttcaaaataataaagtccttagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 4426709  T
Q  407 cccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaact 506  Q
    ||| |||||||||||| ||||||||| |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| |||| |||    
T  4426708 cccgttaaacataagg-aactattcttaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtgggtagact 4426610  T
Q  507 gatgat 512  Q
    ||||||    
T  4426609 gatgat 4426604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 160; E-Value: 5e-85
Query Start/End: Original strand, 317 - 512
Target Start/End: Original strand, 8845215 - 8845410
Alignment:
Q  317 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaac 416  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||    
T  8845215 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagatcccgttaaac 8845314  T
Q  417 ataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaactgatgat 512  Q
    |||||||||||||||| |||||||||||||||||| ||| ||||||||| ||||||||||||||||||||||||||||||| ||||  ||||||||    
T  8845315 ataaggaaactattcttaaagtatccgtagtcaagctttattgagaagtcggatatcattaaagcatagagactattatgtgggtaggctgatgat 8845410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 160; E-Value: 5e-85
Query Start/End: Original strand, 317 - 512
Target Start/End: Original strand, 8858179 - 8858374
Alignment:
Q  317 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaac 416  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||    
T  8858179 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagatcccgttaaac 8858278  T
Q  417 ataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaactgatgat 512  Q
    |||||||||||||||| |||||||||||||||||| ||| ||||||||| ||||||||||||||||||||||||||||||| ||||  ||||||||    
T  8858279 ataaggaaactattcttaaagtatccgtagtcaagctttattgagaagtcggatatcattaaagcatagagactattatgtgggtaggctgatgat 8858374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 19 - 193
Target Start/End: Original strand, 22339490 - 22339664
Alignment:
Q  19 aagacaagttgggatttgtattttcttccnnnnnnncgccctttttcatcaaatagacacacaaaatcagcataactttgcaaggatctataaaatcgag 118  Q
    |||||||| ||||||||||||||||||||       ||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  22339490 aagacaagctgggatttgtattttcttcctttttttcgcactttttcatcaaatagacatacaaaatcagcataactttgcaaggatctataaaatcgag 22339589  T
Q  119 atcaaaacatgtgtacgtcaagctaaaatggtaatacatcttaagtgttatcaccattttgatgcaagttcatac 193  Q
    |||||||||||||||  || |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22339590 atcaaaacatgtgtaaatcgagctaaaatggtaatacatcttaagtgttatcaccattttgatgcaagttcatac 22339664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 305 - 420
Target Start/End: Original strand, 12357136 - 12357251
Alignment:
Q  305 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 404  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12357136 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 12357235  T
Q  405 accccattaaacataa 420  Q
    ||||||||||||||||    
T  12357236 accccattaaacataa 12357251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 313 - 512
Target Start/End: Original strand, 20311299 - 20311499
Alignment:
Q  313 tttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaag-tataacttaattgtgagaccccat 411  Q
    ||||||||||||||||||||||||| ||||||||||||| | || |||||||| |  ||| |||||| ||||||| ||||||||||||||||||||||||    
T  20311299 tttctttattgattttgttttgttttaaaataataaagtacttataatagttaatatgttcaatggagcattaaggtataacttaattgtgagaccccat 20311398  T
Q  412 taaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaactgatga 511  Q
    |||||||||||| ||| || | |||||||  || |||||| ||| ||| |||||| |||||||||||||||||||||||||| ||| |||| | ||||||    
T  20311399 taaacataaggacactgtttttaaagtatttgttgtcaagctttattgtgaagtgagatatcattaaagcatagagactattttgtgggtagattgatga 20311498  T
Q  512 t 512  Q
    |    
T  20311499 t 20311499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 307 - 511
Target Start/End: Original strand, 5616215 - 5616421
Alignment:
Q  307 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 406  Q
    |||||||||||||||| |||||||||||||||||||||||||||| |||| |||| ||||||  |||  ||||||||||||| | ||| |||  |||||     
T  5616215 aaggcatttctttattcattttgttttgtttcaaaataataaagttcctaaaataattagtctatttcttggaacattaagtctgactaaatcatgagat 5616314  T
Q  407 cccattaaacataaggaaactattctcaaagtatccgtagtcaa--gttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaa 504  Q
    ||| ||||||   |||| | |||||| ||||||||||| |||||  ||||| ||  ||| |||||||| | |||||||| |||||||||||||| ||| |    
T  5616315 cccgttaaactagaggacattattcttaaagtatccgttgtcaaaggttttattatgaattgggatattaataaagcattgagactattatgtatgtaga 5616414  T
Q  505 ctgatga 511  Q
     ||||||    
T  5616415 ttgatga 5616421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 311 - 512
Target Start/End: Complemental strand, 10677753 - 10677555
Alignment:
Q  311 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 410  Q
    ||||| |||||||||||| ||||||||||| | ||||||| ||||| |||| |||||| || ||||||| |||||||||| ||||||| | |||| ||||    
T  10677753 catttttttattgattttcttttgtttcaataaaataaagcccctaaaataattagtctgtataatggagcattaagtatgacttaatcgcgaga-ccca 10677655  T
Q  411 ttaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaactgatg 510  Q
    ||||||  || || | |||||| |||||||||||||||||| ||  | | ||| || |||| |||||||| ||| |||||||||||| |||| |||||||    
T  10677654 ttaaacgaaatgatattattcttaaagtatccgtagtcaagctt--tagtgaaatgagataacattaaagtatatagactattatgtgggtagactgatg 10677557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 311 - 512
Target Start/End: Complemental strand, 10891393 - 10891195
Alignment:
Q  311 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 410  Q
    ||||| |||||||||||| ||||||||||| | ||||||| ||||| |||| |||||| || ||||||| |||||||||| ||||||| | |||| ||||    
T  10891393 catttttttattgattttcttttgtttcaataaaataaagcccctaaaataattagtctgtataatggagcattaagtatgacttaatcgcgaga-ccca 10891295  T
Q  411 ttaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaactgatg 510  Q
    ||||||  || || | |||||| |||||||||||||||||| ||  | | ||| || |||| |||||||| ||| |||||||||||| |||| |||||||    
T  10891294 ttaaacgaaatgatattattcttaaagtatccgtagtcaagctt--tagtgaaatgagataacattaaagtatatagactattatgtgggtagactgatg 10891197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 311 - 497
Target Start/End: Complemental strand, 5668327 - 5668140
Alignment:
Q  311 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 410  Q
    ||||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||  ||||||||| |||||||| | | ||||| |||||| ||||    
T  5668327 catttctttgttgattttgttttgtttcaaaataataaagtctctagaataattagtctatttaatggagcattaagtgtgatttaatcgtgaga-ccca 5668229  T
Q  411 ttaaacataaggaaactattctcaaag--tatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgt 497  Q
    |||||   ||||| | |||||| ||||  |||  ||||||||| ||| ||| |||  | |||| ||||||| |||||||||||||||||    
T  5668228 ttaaatgaaaggacattattcttaaagtatatttgtagtcaagctttattgtgaaaagagataacattaaatcatagagactattatgt 5668140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 311 - 398
Target Start/End: Original strand, 35223576 - 35223663
Alignment:
Q  311 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaat 398  Q
    ||||||||| ||||||||||||||||| ||||||||||||||||||||||| |||||| |||||||||| |||||||| | |||||||    
T  35223576 catttctttgttgattttgttttgttttaaaataataaagtccctagaataattagtctgtttaatggagcattaagtgtgacttaat 35223663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 212 - 269
Target Start/End: Original strand, 5713855 - 5713912
Alignment:
Q  212 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 269  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5713855 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 5713912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 212 - 269
Target Start/End: Original strand, 26963547 - 26963604
Alignment:
Q  212 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 269  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26963547 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 26963604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 212 - 269
Target Start/End: Original strand, 26970370 - 26970427
Alignment:
Q  212 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 269  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26970370 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 26970427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 213 - 269
Target Start/End: Complemental strand, 19927059 - 19927003
Alignment:
Q  213 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 269  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19927059 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 19927003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 212 - 269
Target Start/End: Complemental strand, 10621633 - 10621576
Alignment:
Q  212 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 269  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  10621633 ttgttggaataagccctaatagccaatctatattgattggttttggctttgtatcatg 10621576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 213 - 269
Target Start/End: Original strand, 5707228 - 5707284
Alignment:
Q  213 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 269  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  5707228 tgttggaataagccctaatagccaatctatattgattgtgtttggctttgtatcatg 5707284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 213 - 269
Target Start/End: Original strand, 12357044 - 12357100
Alignment:
Q  213 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 269  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  12357044 tgttggaataagccctaatagccaatctatattgattggatttggctttgtatcatg 12357100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 215 - 269
Target Start/End: Original strand, 868507 - 868561
Alignment:
Q  215 ttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 269  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  868507 ttggaataaaccctaatagccaatctatattgattgggtttggctttgtatcatg 868561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 213 - 269
Target Start/End: Complemental strand, 10628711 - 10628655
Alignment:
Q  213 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 269  Q
    ||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||    
T  10628711 tgttggaataagccctaatagccaatctatattgattggttttgactttgtatcatg 10628655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 213 - 269
Target Start/End: Complemental strand, 17142428 - 17142372
Alignment:
Q  213 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 269  Q
    |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  17142428 tgttggaaaaagccctaatagccaatctatattgattgggtttgactttgtatcatg 17142372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 213 - 269
Target Start/End: Original strand, 55612594 - 55612650
Alignment:
Q  213 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 269  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  55612594 tgttagaataagccctaataaccaatctatattgattgggtttggctttgtatcatg 55612650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 213 - 267
Target Start/End: Complemental strand, 28393434 - 28393380
Alignment:
Q  213 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatca 267  Q
    ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||    
T  28393434 tgttggagtaagccctaatagccaatctatattgattgggtttgactttgtatca 28393380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 69 - 147
Target Start/End: Original strand, 50882036 - 50882114
Alignment:
Q  69 aaatagacacacaaaatcagcataactttgcaaggatctataaaatcgagatcaaaacatgtgtacgtcaagctaaaat 147  Q
    |||||||||||||| | ||||||||| ||||||  ||||||||||||||||||||||||||| || ||| |||||||||    
T  50882036 aaatagacacacaataccagcataacattgcaaaaatctataaaatcgagatcaaaacatgtataagtcgagctaaaat 50882114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 212 - 269
Target Start/End: Original strand, 18268975 - 18269032
Alignment:
Q  212 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 269  Q
    |||||||||||||||| |||||||||||||| |||| |||||||||||||||||||||    
T  18268975 ttgttggaataagcccaaatagccaatctatgttgaatgggtttggctttgtatcatg 18269032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 213 - 269
Target Start/End: Complemental strand, 4426903 - 4426847
Alignment:
Q  213 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 269  Q
    ||||||| |||| |||||||||||||||||||||||||||||||||| |||||||||    
T  4426903 tgttggagtaagtcctaatagccaatctatattgattgggtttggctctgtatcatg 4426847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 69 - 147
Target Start/End: Complemental strand, 16635494 - 16635416
Alignment:
Q  69 aaatagacacacaaaatcagcataactttgcaaggatctataaaatcgagatcaaaacatgtgtacgtcaagctaaaat 147  Q
    |||||||||| ||| | ||||||||| ||||||  |||||||||||||||||||||| ||||||| ||| |||||||||    
T  16635494 aaatagacacgcaataccagcataacattgcaaaaatctataaaatcgagatcaaaaaatgtgtaagtcgagctaaaat 16635416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 354 - 421
Target Start/End: Complemental strand, 39074346 - 39074278
Alignment:
Q  354 ctagaatagttagtccgtttaa-tggaacattaagtataacttaattgtgagaccccattaaacataag 421  Q
    |||||||| ||||||||||||| | ||||||||||||| |||||||  |||||||||||||||||||||    
T  39074346 ctagaataattagtccgtttaaattgaacattaagtatgacttaatcatgagaccccattaaacataag 39074278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 220 - 269
Target Start/End: Original strand, 55992680 - 55992729
Alignment:
Q  220 ataagccctaatagccaatctatattgattgggtttggctttgtatcatg 269  Q
    ||||||||||||||||||| | ||||||||||||||| ||||||||||||    
T  55992680 ataagccctaatagccaatttgtattgattgggtttgactttgtatcatg 55992729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 228 - 269
Target Start/End: Complemental strand, 5668412 - 5668371
Alignment:
Q  228 taatagccaatctatattgattgggtttggctttgtatcatg 269  Q
    ||||||||||||||||||||||| |||||| |||||||||||    
T  5668412 taatagccaatctatattgattgtgtttggttttgtatcatg 5668371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 221 - 269
Target Start/End: Original strand, 8845118 - 8845166
Alignment:
Q  221 taagccctaatagccaatctatattgattgggtttggctttgtatcatg 269  Q
    |||| ||||||||||||||||| ||||||| ||||| ||||||||||||    
T  8845118 taagtcctaatagccaatctatgttgattgagtttgactttgtatcatg 8845166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 221 - 269
Target Start/End: Original strand, 8858082 - 8858130
Alignment:
Q  221 taagccctaatagccaatctatattgattgggtttggctttgtatcatg 269  Q
    |||| ||||||||||||||||| ||||||| ||||| ||||||||||||    
T  8858082 taagtcctaatagccaatctatgttgattgagtttgactttgtatcatg 8858130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 229 - 269
Target Start/End: Original strand, 18262136 - 18262176
Alignment:
Q  229 aatagccaatctatattgattgggtttggctttgtatcatg 269  Q
    |||||||||||||| |||| |||||||||||||||||||||    
T  18262136 aatagccaatctatgttgaatgggtttggctttgtatcatg 18262176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 331 - 414
Target Start/End: Complemental strand, 21454319 - 21454235
Alignment:
Q  331 tttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacatt-aagtataacttaattgtgagaccccattaa 414  Q
    ||||||||||| ||||||||| | |||||||||||||  | ||||||||||||| || | | |||||||  ||||||||||||||    
T  21454319 tttgtttcaaagtaataaagttcttagaatagttagtttgattaatggaacattaaaatgtgacttaatattgagaccccattaa 21454235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 355 - 414
Target Start/End: Complemental strand, 11161972 - 11161913
Alignment:
Q  355 tagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaa 414  Q
    ||||||||||| || |||||||||||||  |||| | ||||||||||||||| |||||||    
T  11161972 tagaatagttaatcagtttaatggaacacaaagtgtgacttaattgtgagactccattaa 11161913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 215 - 269
Target Start/End: Original strand, 20311207 - 20311261
Alignment:
Q  215 ttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 269  Q
    ||||| |||||  ||||||||||||| |||| ||||| |||||||||||||||||    
T  20311207 ttggagtaagctgtaatagccaatctgtattcattggatttggctttgtatcatg 20311261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 419 - 512
Target Start/End: Original strand, 35223674 - 35223767
Alignment:
Q  419 aaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaactgatgat 512  Q
    ||||| | |||||| ||||||| |||||||||| ||| |||  ||   ||||| |||||||||||| |||||||||||| |||| || ||||||    
T  35223674 aaggacattattcttaaagtattcgtagtcaagctttattgtaaaaaaggataacattaaagcatatagactattatgtgggtagacggatgat 35223767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 221 - 269
Target Start/End: Original strand, 24699958 - 24700006
Alignment:
Q  221 taagccctaatagccaatctatattgattgggtttggctttgtatcatg 269  Q
    ||||||| |||| |||||||||||||||||  ||||| |||||||||||    
T  24699958 taagcccgaataaccaatctatattgattgaatttggttttgtatcatg 24700006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 196; Significance: 1e-106; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 305 - 512
Target Start/End: Original strand, 18252030 - 18252237
Alignment:
Q  305 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 404  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18252030 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 18252129  T
Q  405 accccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaa 504  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| |    
T  18252130 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 18252229  T
Q  505 ctgatgat 512  Q
    ||||||||    
T  18252230 ctgatgat 18252237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 305 - 512
Target Start/End: Complemental strand, 18532721 - 18532514
Alignment:
Q  305 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 404  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  18532721 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagttcgtttaatggaacattaagtataacttaattgtgag 18532622  T
Q  405 accccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaa 504  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || |    
T  18532621 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtagataga 18532522  T
Q  505 ctgatgat 512  Q
    ||||||||    
T  18532521 ctgatgat 18532514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 305 - 512
Target Start/End: Complemental strand, 27131616 - 27131409
Alignment:
Q  305 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 404  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27131616 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 27131517  T
Q  405 accccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaa 504  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||| ||| |||||||||||||||||||||||||||| ||||||||||||||||| |    
T  27131516 accccattaaacataaggaaactattctcaaagtatttgtagtcaagctttattgagaagtgggatatcattaaagcataaagactattatgtaggtaga 27131417  T
Q  505 ctgatgat 512  Q
    ||||||||    
T  27131416 ctgatgat 27131409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 307 - 512
Target Start/End: Complemental strand, 21171438 - 21171233
Alignment:
Q  307 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 406  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| |||||||||||||||||||    
T  21171438 aaggcatttctttattgattttgttttgtttcaaaataataaagtccttagaatagttagtccgtttcatggaacattaaatataacttaattgtgagac 21171339  T
Q  407 cccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaact 506  Q
    ||| || ||||||||||||||||||| |||||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||||||| |||| |||    
T  21171338 cccgttgaacataaggaaactattcttaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcataaagactattatgtgggtagact 21171239  T
Q  507 gatgat 512  Q
    ||||||    
T  21171238 gatgat 21171233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 307 - 512
Target Start/End: Complemental strand, 27310782 - 27310577
Alignment:
Q  307 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 406  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27310782 aaggcatttctttattgattttgttttgtttcaaaataataaagtccttagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 27310683  T
Q  407 cccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaact 506  Q
    | | || ||||||||||||||||||| |||||||| ||||||||| ||| ||||||||||| ||||||||||||||||||||||||||||| |||| |||    
T  27310682 cacgttgaacataaggaaactattcttaaagtatcagtagtcaagctttattgagaagtggaatatcattaaagcatagagactattatgtgggtagact 27310583  T
Q  507 gatgat 512  Q
    ||||||    
T  27310582 gatgat 27310577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 158; E-Value: 8e-84
Query Start/End: Original strand, 307 - 512
Target Start/End: Complemental strand, 16359240 - 16359035
Alignment:
Q  307 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 406  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  16359240 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagaataacttaattgtgagac 16359141  T
Q  407 cccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaact 506  Q
    ||| |||||||||||||||||||||| |||||| || |||||||| ||| ||||||| ||| ||||||||||||||||||||||||||||| |||| |||    
T  16359140 cccgttaaacataaggaaactattcttaaagtaaccctagtcaagctttattgagaaatggaatatcattaaagcatagagactattatgtgggtagact 16359041  T
Q  507 gatgat 512  Q
    ||||||    
T  16359040 gatgat 16359035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 138; E-Value: 7e-72
Query Start/End: Original strand, 311 - 512
Target Start/End: Complemental strand, 36816834 - 36816633
Alignment:
Q  311 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 410  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||||||||||||| ||||||||||||| ||     
T  36816834 catttctttattgattttgttttgtttcaaaataatgaagtccctagaatagttcgtctgtttaatggaacattaagtataaattaattgtgagactccg 36816735  T
Q  411 ttaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaactgatg 510  Q
    ||||||||||||| | |||||| ||||||||| |||||||| ||| ||||||||||||||| ||||||||||||||||||||||||| | || |||||||    
T  36816734 ttaaacataaggacattattcttaaagtatccatagtcaagctttattgagaagtgggataccattaaagcatagagactattatgtggatagactgatg 36816635  T
Q  511 at 512  Q
    ||    
T  36816634 at 36816633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 305 - 512
Target Start/End: Complemental strand, 3856126 - 3855919
Alignment:
Q  305 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 404  Q
    ||||||||||||||| || |||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  3856126 acaaggcatttctttgtttattttgttttgtttcaaaataacaaagtccctagaatagttagcccgtttaatggaacattaagtataacttaattgtgag 3856027  T
Q  405 accccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaa 504  Q
    ||||||||||||||||||| | |||||| ||| |||  ||||||||  ||| ||| |||||||||||| |||||||||| |||||||||| || |||| |    
T  3856026 accccattaaacataaggacattattcttaaaatatttgtagtcaaactttattgtgaagtgggatattattaaagcatggagactattacgtgggtaga 3855927  T
Q  505 ctgatgat 512  Q
    ||||||||    
T  3855926 ctgatgat 3855919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 305 - 512
Target Start/End: Complemental strand, 22657429 - 22657221
Alignment:
Q  305 acaaggcatttctttattgatttt-gttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtga 403  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  22657429 acaagacatttctttattgatttttgttttgtttcaaaataataaagttcctagaatagttagtctgtttaatggaacattaaatataacttaattgtga 22657330  T
Q  404 gaccccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaa 503  Q
    |||||| ||||||||||||| || ||||| ||||| ||  |||||||| ||| ||  ||| || ||||||||||||||||||||||||| |||| | ||     
T  22657329 gacccctttaaacataaggacacaattcttaaagtgtctctagtcaagctttattctgaaatgagatatcattaaagcatagagactatcatgtggatag 22657230  T
Q  504 actgatgat 512  Q
    |||||||||    
T  22657229 actgatgat 22657221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 311 - 512
Target Start/End: Complemental strand, 27277756 - 27277557
Alignment:
Q  311 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 410  Q
    ||||||||| ||| |||||||||||||||||||||||| |||||||||||| ||||||| ||||| ||| |||| ||| | ||||||| | |||| ||      
T  27277756 catttctttgttgtttttgttttgtttcaaaataataacgtccctagaataattagtccatttaacggagcatt-agtgtgacttaatcgcgaga-cctt 27277659  T
Q  411 ttaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaactgatg 510  Q
    |||| |  || || | |||||| |||||||||||||||| | ||| ||| |||  |||||| ||||||||||||||||||||||||| |||| || ||||    
T  27277658 ttaaccgaaatgacattattcttaaagtatccgtagtcaggctttattgtgaaaagggataacattaaagcatagagactattatgtgggtagaccgatg 27277559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 213 - 269
Target Start/End: Original strand, 18251936 - 18251992
Alignment:
Q  213 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 269  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18251936 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 18251992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 213 - 269
Target Start/End: Complemental strand, 18532813 - 18532757
Alignment:
Q  213 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 269  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18532813 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 18532757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 339 - 497
Target Start/End: Complemental strand, 12006712 - 12006554
Alignment:
Q  339 aaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaacataaggaaactattctcaaagt 438  Q
    ||||||||||||||||||||||||||||||  |||||||||| ||||||| |  |||||| |||||||||||| ||||||||||| | |||| | |||      
T  12006712 aaaataataaagtccctagaatagttagtctatttaatggaatattaagtgtgccttaatcgtgagaccccatgaaacataaggacattattattaaaac 12006613  T
Q  439 atccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgt 497  Q
    || ||||||||||  ||  || |||| |||||| ||||||| | |||||| | ||||||    
T  12006612 attcgtagtcaagccttagtgtgaagagggataacattaaaacttagagattgttatgt 12006554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 339 - 512
Target Start/End: Complemental strand, 12014457 - 12014284
Alignment:
Q  339 aaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaacataaggaaactattctcaaagt 438  Q
    |||||||||||||| ||||||||  ||||||||||||||||| ||||||| ||| ||||| || ||| |||||||||||||| ||   |||||| |||      
T  12014457 aaaataataaagtcactagaatacatagtccgtttaatggaatattaagtgtaaattaatcgttagatcccattaaacataatgatgttattcttaaaac 12014358  T
Q  439 atccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaactgatgat 512  Q
    ||||||||| ||| |||  || |||| ||||||  |||||||| || |||| ||||||| |||| | |||||||    
T  12014357 atccgtagttaagctttagtgtgaagagggatacgattaaagcgtaaagaccattatgtgggtagaatgatgat 12014284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 213 - 269
Target Start/End: Complemental strand, 27310877 - 27310821
Alignment:
Q  213 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 269  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  27310877 tgttggagtaagccctaatagccaatctatattgattgagtttggctttgtatcatg 27310821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 213 - 269
Target Start/End: Complemental strand, 16359336 - 16359280
Alignment:
Q  213 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 269  Q
    ||||||| |||||||||||||||||||||||||||||||||| || |||||||||||    
T  16359336 tgttggagtaagccctaatagccaatctatattgattgggttaggatttgtatcatg 16359280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 317 - 502
Target Start/End: Complemental strand, 9918106 - 9917928
Alignment:
Q  317 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaac 416  Q
    |||||||||||||||||||| ||||||||||||||| ||       |||||  ||||||| |||||||||||||||||| ||   ||||  ||||||||     
T  9918106 tttattgattttgttttgttacaaaataataaagtcactt------ttagtttgtttaatcgaacattaagtataacttgatcacgaga-tccattaaat 9918014  T
Q  417 ataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggta 502  Q
    ||||||| | |||||| ||| ||||  |||| ||| ||| |||  |||||||||| |||| ||||||||||| || ||||| ||||    
T  9918013 ataaggacattattcttaaaatatctatagttaagctttattgttaagtgggatagcattgaagcatagagaatactatgtcggta 9917928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 212 - 269
Target Start/End: Complemental strand, 21171536 - 21171479
Alignment:
Q  212 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 269  Q
    |||||||| ||||| |||||||||||||||||| ||||| ||||||||||||||||||    
T  21171536 ttgttggagtaagctctaatagccaatctatatggattgagtttggctttgtatcatg 21171479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 69 - 133
Target Start/End: Original strand, 7589224 - 7589288
Alignment:
Q  69 aaatagacacacaaaatcagcataactttgcaaggatctataaaatcgagatcaaaacatgtgta 133  Q
    |||||||||||||| | ||||||||| ||||||  |||||||||||||||||||||| |||||||    
T  7589224 aaatagacacacaataccagcataacattgcaaaaatctataaaatcgagatcaaaaaatgtgta 7589288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 212 - 266
Target Start/End: Complemental strand, 36816935 - 36816881
Alignment:
Q  212 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatc 266  Q
    |||| ||| ||||||||||||  ||||||||||||||||||||||||||||||||    
T  36816935 ttgtcggattaagccctaatattcaatctatattgattgggtttggctttgtatc 36816881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 212 - 269
Target Start/End: Complemental strand, 3856221 - 3856164
Alignment:
Q  212 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 269  Q
    |||||||| || |||||||||||||||| || ||||||||||||| ||||||||||||    
T  3856221 ttgttggagtaggccctaatagccaatccatcttgattgggtttgactttgtatcatg 3856164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 212 - 265
Target Start/End: Complemental strand, 22657522 - 22657469
Alignment:
Q  212 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtat 265  Q
    |||||||| |||||| ||||||||||| ||||||||||| ||||||||||||||    
T  22657522 ttgttggagtaagccttaatagccaatatatattgattgagtttggctttgtat 22657469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 311 - 380
Target Start/End: Complemental strand, 30720694 - 30720625
Alignment:
Q  311 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaa 380  Q
    ||||| ||||||| |||| |||||||| ||||||||||||| ||| ||||| ||||| ||||||||||||    
T  30720694 catttttttattggttttattttgttttaaaataataaagttcctggaataattagttcgtttaatggaa 30720625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 213 - 269
Target Start/End: Complemental strand, 27131704 - 27131652
Alignment:
Q  213 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 269  Q
    ||||||||||||||||||||||||||||||     ||||||||||||||||||||||    
T  27131704 tgttggaataagccctaatagccaatctat----gttgggtttggctttgtatcatg 27131652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 69 - 171
Target Start/End: Complemental strand, 24067962 - 24067860
Alignment:
Q  69 aaatagacacacaaaatcagcataactttgcaaggatctataaaatcgagatcaaaacatgtgtacgtcaagctaaaatggtaatacatcttaagtgtta 168  Q
    |||||||||||||| | || ||||||  |||||  |||| ||||||| | ||||||||||||||| ||| ||||||||  ||||| ||| ||| ||||||    
T  24067962 aaatagacacacaataccaacataacaatgcaaaaatctgtaaaatcaaaatcaaaacatgtgtaagtcgagctaaaaaagtaatgcattttacgtgtta 24067863  T
Q  169 tca 171  Q
    |||    
T  24067862 tca 24067860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 335 - 412
Target Start/End: Original strand, 3403248 - 3403325
Alignment:
Q  335 tttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccatt 412  Q
    ||||||| ||||||||||  || ||||||||||| | ||||||||| ||||||| | |||||| ||||||||| ||||    
T  3403248 tttcaaagtaataaagtctataaaatagttagtctgattaatggaatattaagtgtgacttaaatgtgagaccacatt 3403325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 335 - 412
Target Start/End: Complemental strand, 3443571 - 3443494
Alignment:
Q  335 tttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccatt 412  Q
    ||||||| ||||||||||  || ||||||||||| | ||||||||| ||||||| | |||||| ||||||||| ||||    
T  3443571 tttcaaagtaataaagtctataaaatagttagtctgattaatggaatattaagtgtgacttaaatgtgagaccacatt 3443494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 213 - 269
Target Start/End: Complemental strand, 27277856 - 27277800
Alignment:
Q  213 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 269  Q
    ||||||| |||||||||||||||||||||| || |||  ||||| ||||||||||||    
T  27277856 tgttggagtaagccctaatagccaatctatgttaattatgtttgactttgtatcatg 27277800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 192; Significance: 1e-104; HSPs: 2)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 305 - 512
Target Start/End: Original strand, 18288 - 18495
Alignment:
Q  305 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 404  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  18288 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaattgaacattaagtataacttaattgtgag 18387  T
Q  405 accccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaa 504  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  18388 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 18487  T
Q  505 ctgatgat 512  Q
    ||||||||    
T  18488 ctgatgat 18495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 213 - 269
Target Start/End: Original strand, 18196 - 18252
Alignment:
Q  213 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 269  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18196 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 18252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 192; Significance: 1e-104; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 305 - 512
Target Start/End: Original strand, 29327784 - 29327991
Alignment:
Q  305 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 404  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  29327784 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtcagtttaatggaacattaagtataacttaattgtgag 29327883  T
Q  405 accccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaa 504  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| |    
T  29327884 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 29327983  T
Q  505 ctgatgat 512  Q
    ||||||||    
T  29327984 ctgatgat 29327991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 305 - 512
Target Start/End: Complemental strand, 11536269 - 11536062
Alignment:
Q  305 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 404  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  11536269 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtacaacttaattgtgag 11536170  T
Q  405 accccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaa 504  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| |    
T  11536169 accccattaaacataaggaacctattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 11536070  T
Q  505 ctgatgat 512  Q
    ||||||||    
T  11536069 ctgatgat 11536062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 305 - 512
Target Start/End: Complemental strand, 11543187 - 11542980
Alignment:
Q  305 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 404  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  11543187 acaatgcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtcag 11543088  T
Q  405 accccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaa 504  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| |    
T  11543087 accccattaaacataaggaacctattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 11542988  T
Q  505 ctgatgat 512  Q
    ||||||||    
T  11542987 ctgatgat 11542980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 307 - 512
Target Start/End: Original strand, 15152445 - 15152650
Alignment:
Q  307 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 406  Q
    |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15152445 aaggcatttctttattgagtttgttttgtttcaaaataataaagttcctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 15152544  T
Q  407 cccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaact 506  Q
    ||| ||||||||| |||||||||||| |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| |||    
T  15152545 cccgttaaacatacggaaactattcttaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 15152644  T
Q  507 gatgat 512  Q
    ||||||    
T  15152645 gatgat 15152650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 307 - 512
Target Start/End: Original strand, 15148144 - 15148349
Alignment:
Q  307 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 406  Q
    |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||| || |||||||||||||||||||||||||||||    
T  15148144 aaggcatttctttattgagtttgttttgtttcaaaataataaagttcctagaatagttagtccgtttgattgaacattaagtataacttaattgtgagac 15148243  T
Q  407 cccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaact 506  Q
    ||| |||||||||||||||||||||| |||||||| ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| |||    
T  15148244 cccgttaaacataaggaaactattcttaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 15148343  T
Q  507 gatgat 512  Q
    ||||||    
T  15148344 gatgat 15148349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 307 - 512
Target Start/End: Original strand, 18561009 - 18561214
Alignment:
Q  307 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 406  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  18561009 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaactgtgagac 18561108  T
Q  407 cccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaact 506  Q
    ||| |||||||| ||||||||||||| |||||||| ||||||||| ||| |||||| |||||||||||||||||||||||||||||||||| |||| |||    
T  18561109 cccgttaaacattaggaaactattcttaaagtatctgtagtcaagctttattgagaggtgggatatcattaaagcatagagactattatgtgggtagact 18561208  T
Q  507 gatgat 512  Q
    ||||||    
T  18561209 gatgat 18561214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 158; E-Value: 8e-84
Query Start/End: Original strand, 307 - 512
Target Start/End: Original strand, 12750828 - 12751033
Alignment:
Q  307 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 406  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  12750828 aaggcatttctttattgattttgttttgtttcaaagtaataaagtccctagaatagttagtccgtttaatgaaacattaagtataacttaattgtgagac 12750927  T
Q  407 cccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaact 506  Q
    | | |||||||||| ||||||||||| |||||||||||||||||| ||| ||||||||| ||||||||||||||||||||||||||||||| | || |||    
T  12750928 ctcgttaaacataaagaaactattcttaaagtatccgtagtcaagctttattgagaagttggatatcattaaagcatagagactattatgtggatagact 12751027  T
Q  507 gatgat 512  Q
    ||||||    
T  12751028 gatgat 12751033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 311 - 508
Target Start/End: Original strand, 12738542 - 12738739
Alignment:
Q  311 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 410  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  |||||||| |||||||| ||||||||||||||||||||       
T  12738542 catttctttattgattttattttgtttcaaaataataaagtccctagaatagttagtttgtttaatgaaacattaattataacttaattgtgagaccttg 12738641  T
Q  411 ttaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaactga 508  Q
    |||||||||||||||||||||| |||||||| ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| |||| |||||    
T  12738642 ttaaacataaggaaactattcttaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtgggtagactga 12738739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 307 - 497
Target Start/End: Complemental strand, 18258047 - 18257857
Alignment:
Q  307 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 406  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| |||||||||||||||    
T  18258047 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaataattagtctgtttaatggaacattaagtatgacttaattgtgagac 18257948  T
Q  407 cccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgt 497  Q
    ||||||||||| ||||| | |||||| |||||||||||||||||||||| |||  |||| ||||| || ||| ||||| ||||||||||||    
T  18257947 cccattaaacacaaggacattattcttaaagtatccgtagtcaagtttttttgttaagtaggataacaataatgcataaagactattatgt 18257857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 311 - 493
Target Start/End: Original strand, 13392157 - 13392338
Alignment:
Q  311 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 410  Q
    ||||||||| |||| |||||||||||||||||||||||||| ||||||| | |||||| | |||||||| |||||||| | ||||||| |||||| ||||    
T  13392157 catttctttgttgactttgttttgtttcaaaataataaagttcctagaacaattagtctgcttaatggagcattaagtgtgacttaatcgtgaga-ccca 13392255  T
Q  411 ttaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactatt 493  Q
    |||||   ||||| | |||||| ||||||||  |||||||  ||| ||| |||  |||||| ||||||| |||||||||||||    
T  13392256 ttaaatgaaaggacattattcttaaagtatcaatagtcaaactttattgtgaaaagggataacattaaaacatagagactatt 13392338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 327 - 512
Target Start/End: Original strand, 2364917 - 2365101
Alignment:
Q  327 ttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaacataaggaaac 426  Q
    ||||| |||||||||||||||||||| |||||||| ||||||  | |||||||||||||||| |  |||||| |||||| ||||||||||  || || |     
T  2364917 ttgttatgtttcaaaataataaagtctctagaataattagtctttctaatggaacattaagtgtggcttaatcgtgagaacccattaaactaaatgacat 2365016  T
Q  427 tattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaactgatgat 512  Q
    |||||| ||| ||| |||||||||   || ||| ||| || |||| ||||||| |||||||||||| |||| |||  |||||||||    
T  2365017 tattcttaaaatattcgtagtcaa-ccttattgtgaaatgagataacattaaaacatagagactatcatgtgggtcgactgatgat 2365101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 212 - 269
Target Start/End: Complemental strand, 11543280 - 11543223
Alignment:
Q  212 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 269  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  11543280 ttgttggaataagccctaatagccaatctatattgattggttttggctttgtatcatg 11543223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 213 - 269
Target Start/End: Complemental strand, 2653331 - 2653275
Alignment:
Q  213 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 269  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  2653331 tgttggaataagccctaatagccaatctatattgattgggattggctttgtatcatg 2653275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 213 - 269
Target Start/End: Original strand, 12738443 - 12738499
Alignment:
Q  213 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 269  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  12738443 tgttggagtaagccctaatagccaatctatattgattgggtttggctttgtatcatg 12738499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 311 - 398
Target Start/End: Original strand, 39111819 - 39111905
Alignment:
Q  311 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaat 398  Q
    |||||||||||| |||||||||| |||||||| |||||||||||||||||||  ||||||||||||| |||||||||||  |||||||    
T  39111819 catttctttattaattttgttttatttcaaaa-aataaagtccctagaatagcgagtccgtttaatgaaacattaagtacgacttaat 39111905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 212 - 269
Target Start/End: Complemental strand, 11536362 - 11536305
Alignment:
Q  212 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 269  Q
    ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  11536362 ttgttggaataagccctaatagccactctatattgattggttttggctttgtatcatg 11536305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 212 - 269
Target Start/End: Original strand, 12750732 - 12750789
Alignment:
Q  212 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 269  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  12750732 ttgttggagtaagccctaatagctaatctatattgattgggtttggctttgtatcatg 12750789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 212 - 269
Target Start/End: Original strand, 15152349 - 15152406
Alignment:
Q  212 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 269  Q
    |||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  15152349 ttgttggagtaagccctaatagccaatctatattgattgggtttggttttgtatcatg 15152406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 212 - 268
Target Start/End: Original strand, 29327689 - 29327745
Alignment:
Q  212 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcat 268  Q
    |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||    
T  29327689 ttgttggagtaagccctaatagccaatctatattgattgggtttggttttgtatcat 29327745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 338 - 497
Target Start/End: Original strand, 7396221 - 7396381
Alignment:
Q  338 caaaataataaagtccctagaatagttagtccgtttaa-tggaacattaagtataacttaattgtgagaccccattaaacataaggaaactattctcaaa 436  Q
    |||||||| || ||| |||||||||||||| | ||||| ||||||||||||||| |||||||  |||||||| |||||||||||| ||| |||||| |||    
T  7396221 caaaataaaaatgtcgctagaatagttagttcatttaaatggaacattaagtatgacttaatcttgagaccctattaaacataagaaaattattcttaaa 7396320  T
Q  437 gtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgt 497  Q
      ||  |||||||||  ||  || ||| |  |||   ||||||||||||||||||||||||    
T  7396321 acatatgtagtcaagccttagtgtgaaatacgatgatattaaagcatagagactattatgt 7396381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 213 - 269
Target Start/End: Original strand, 15148049 - 15148105
Alignment:
Q  213 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 269  Q
    ||||||| ||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  15148049 tgttggagtaagccctaatagccaatctatattaattgggtttggttttgtatcatg 15148105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 212 - 268
Target Start/End: Original strand, 13392029 - 13392085
Alignment:
Q  212 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcat 268  Q
    |||||||| |||||||||||| ||||||||||||||||| ||||| |||||||||||    
T  13392029 ttgttggagtaagccctaatatccaatctatattgattgtgtttgactttgtatcat 13392085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 379 - 422
Target Start/End: Original strand, 3132748 - 3132791
Alignment:
Q  379 aacattaagtataacttaattgtgagaccccattaaacataagg 422  Q
    |||||||||| |||||||||||||||||||||||||||||||||    
T  3132748 aacattaagtgtaacttaattgtgagaccccattaaacataagg 3132791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 355 - 420
Target Start/End: Original strand, 10234179 - 10234244
Alignment:
Q  355 tagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaacataa 420  Q
    ||||||||||||||||||||||| | |||||| |||||||||||  |||||  |||||||||||||    
T  10234179 tagaatagttagtccgtttaatgaaccattaaatataacttaatcatgagattccattaaacataa 10234244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 213 - 269
Target Start/End: Complemental strand, 18258143 - 18258087
Alignment:
Q  213 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 269  Q
    ||||||| |||||||| |||||||||||| ||||||||| |||||| ||||||||||    
T  18258143 tgttggagtaagccctgatagccaatctagattgattggttttggccttgtatcatg 18258087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 305 - 337
Target Start/End: Complemental strand, 2653239 - 2653207
Alignment:
Q  305 acaaggcatttctttattgattttgttttgttt 337  Q
    |||||||||||||||||||||||||||||||||    
T  2653239 acaaggcatttctttattgattttgttttgttt 2653207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 213 - 269
Target Start/End: Original strand, 18560913 - 18560969
Alignment:
Q  213 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 269  Q
    ||||||| |||||||| | || |||||||| ||||||||| ||||||||||||||||    
T  18560913 tgttggagtaagcccttaaaggcaatctatgttgattgggcttggctttgtatcatg 18560969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 69 - 133
Target Start/End: Complemental strand, 7157529 - 7157465
Alignment:
Q  69 aaatagacacacaaaatcagcataactttgcaaggatctataaaatcgagatcaaaacatgtgta 133  Q
    |||||||||||||| | ||||||||| ||||||  || ||||||||| | ||||||| |||||||    
T  7157529 aaatagacacacaataccagcataacattgcaaaaatttataaaatcaaaatcaaaaaatgtgta 7157465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 192; Significance: 1e-104; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 305 - 512
Target Start/End: Complemental strand, 27381459 - 27381252
Alignment:
Q  305 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 404  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27381459 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 27381360  T
Q  405 accccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaa 504  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  27381359 accccattaaacatatggaaactattctcaaagtatccatagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 27381260  T
Q  505 ctgatgat 512  Q
    ||||||||    
T  27381259 ctgatgat 27381252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 305 - 512
Target Start/End: Complemental strand, 27471842 - 27471635
Alignment:
Q  305 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 404  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27471842 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 27471743  T
Q  405 accccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaa 504  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  27471742 accccattaaacatatggaaactattctcaaagtatccatagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 27471643  T
Q  505 ctgatgat 512  Q
    ||||||||    
T  27471642 ctgatgat 27471635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 307 - 512
Target Start/End: Complemental strand, 17684674 - 17684469
Alignment:
Q  307 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 406  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17684674 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 17684575  T
Q  407 cccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaact 506  Q
    ||| ||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||| |||    
T  17684574 cccgttaaacataaggaaactattctcaaagtatccgtagtcaagctttgatgagaagtgggatatcattaaagcatagagactattatgtaggtagact 17684475  T
Q  507 gatgat 512  Q
    ||||||    
T  17684474 gatgat 17684469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 305 - 512
Target Start/End: Original strand, 29308890 - 29309097
Alignment:
Q  305 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 404  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  29308890 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 29308989  T
Q  405 accccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaa 504  Q
    | ||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| |    
T  29308990 agcccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 29309089  T
Q  505 ctgatgat 512  Q
    ||||||||    
T  29309090 ctgatgat 29309097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 305 - 512
Target Start/End: Original strand, 29315850 - 29316057
Alignment:
Q  305 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 404  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  29315850 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 29315949  T
Q  405 accccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaa 504  Q
    | ||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| |    
T  29315950 agcccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 29316049  T
Q  505 ctgatgat 512  Q
    ||||||||    
T  29316050 ctgatgat 29316057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 307 - 512
Target Start/End: Complemental strand, 16566525 - 16566320
Alignment:
Q  307 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 406  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16566525 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 16566426  T
Q  407 cccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaact 506  Q
    ||| |||||||||||||||||||||| |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| |||    
T  16566425 cccgttaaacataaggaaactattcttaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 16566326  T
Q  507 gatgat 512  Q
    ||||||    
T  16566325 gatgat 16566320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 180; E-Value: 6e-97
Query Start/End: Original strand, 305 - 512
Target Start/End: Complemental strand, 17691647 - 17691440
Alignment:
Q  305 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 404  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17691647 acaaggcatttctttattgattttgttttctttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 17691548  T
Q  405 accccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaa 504  Q
    |||||||||||||||||||||||||||| |||||||||||||||||| |||  ||||||||||||||||||||||||||| ||||||||||||||||| |    
T  17691547 accccattaaacataaggaaactattcttaaagtatccgtagtcaagctttagtgagaagtgggatatcattaaagcataaagactattatgtaggtaga 17691448  T
Q  505 ctgatgat 512  Q
    ||||||||    
T  17691447 ctgatgat 17691440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 170; E-Value: 5e-91
Query Start/End: Original strand, 307 - 512
Target Start/End: Complemental strand, 189182 - 188977
Alignment:
Q  307 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 406  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  189182 aaggcatttctttattgattttgttttgtttcaaaataataaagtccttagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 189083  T
Q  407 cccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaact 506  Q
    |||||||||||||||||||||||||| |||||||  ||||||||| ||| |||||||||| |||||||||||||||||||||||||||||| |||| |||    
T  189082 cccattaaacataaggaaactattcttaaagtatttgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtgggtagact 188983  T
Q  507 gatgat 512  Q
    ||||||    
T  188982 gatgat 188977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 170; E-Value: 5e-91
Query Start/End: Original strand, 307 - 512
Target Start/End: Complemental strand, 25537364 - 25537159
Alignment:
Q  307 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 406  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  25537364 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaataattagtccgtttaatggaacattaagtataactttattgtgagac 25537265  T
Q  407 cccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaact 506  Q
    ||| |||||||||||||||||||||| ||||||| |||||||||| ||| |||||||||||||||||||||||||||| ||||||||||||||||| |||    
T  25537264 cccgttaaacataaggaaactattcttaaagtattcgtagtcaagctttattgagaagtgggatatcattaaagcataaagactattatgtaggtagact 25537165  T
Q  507 gatgat 512  Q
    ||||||    
T  25537164 gatgat 25537159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 307 - 512
Target Start/End: Original strand, 11651725 - 11651930
Alignment:
Q  307 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 406  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  11651725 aaggcatttctttattgattttgatttgtttcaaaataataaagtccctaaaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 11651824  T
Q  407 cccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaact 506  Q
    ||||||||| |||||||||||||||| |||||||| ||||||||| ||| |||||||||| |||||||||||||||||||||||||||||| |||| |||    
T  11651825 cccattaaaaataaggaaactattctaaaagtatcagtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtgggtagact 11651924  T
Q  507 gatgat 512  Q
    ||||||    
T  11651925 gatgat 11651930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 307 - 512
Target Start/End: Complemental strand, 13359474 - 13359269
Alignment:
Q  307 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 406  Q
    ||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||| || |||||||| |||||||||||||||||| |||| ||    
T  13359474 aaggcatttatttatttattttgttttgtttcaaaataataaagtccctagaatagttagttcgcttaatggagcattaagtataacttaatcgtgaaac 13359375  T
Q  407 cccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaact 506  Q
     |||||||||||||  | | |||| | |||||||||||||||||  ||| ||| ||| ||||| | ||||||||| ||||||||||||| | | || |||    
T  13359374 tccattaaacataaaaacattatttttaaagtatccgtagtcaacctttattgtgaaatgggacaacattaaagcgtagagactattatatggatagact 13359275  T
Q  507 gatgat 512  Q
    ||||||    
T  13359274 gatgat 13359269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 344 - 512
Target Start/End: Complemental strand, 20553755 - 20553587
Alignment:
Q  344 aataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaacataaggaaactattctcaaagtatccg 443  Q
    ||||||||| |||| |||| |||||||||||||| || ||||||||  ||||||| |||||| ||||||||| ||||| | | |||||| |||| |||||    
T  20553755 aataaagtctctaggatagctagtccgtttaatgaaatattaagtacgacttaatcgtgagatcccattaaatataagaatattattcttaaagcatccg 20553656  T
Q  444 tagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaactgatgat 512  Q
    |||| || |||| ||| |||||| ||||  ||||||||||| ||| | |||||| |||| |||||||||    
T  20553655 tagtgaatttttattgtgaagtgagataaaattaaagcataaagatttttatgttggtagactgatgat 20553587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 215 - 269
Target Start/End: Complemental strand, 17691737 - 17691683
Alignment:
Q  215 ttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 269  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17691737 ttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 17691683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 212 - 269
Target Start/End: Complemental strand, 27381552 - 27381495
Alignment:
Q  212 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 269  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  27381552 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtttcatg 27381495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 212 - 269
Target Start/End: Complemental strand, 27471935 - 27471878
Alignment:
Q  212 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 269  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  27471935 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtttcatg 27471878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 212 - 269
Target Start/End: Original strand, 29308797 - 29308854
Alignment:
Q  212 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 269  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  29308797 ttgttggaataagccctaatagccaatctatattgattggttttggctttgtatcatg 29308854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 212 - 269
Target Start/End: Original strand, 29315757 - 29315814
Alignment:
Q  212 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 269  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  29315757 ttgttggaataagccctaatagccaatctatattgattggttttggctttgtatcatg 29315814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 212 - 269
Target Start/End: Complemental strand, 17684769 - 17684712
Alignment:
Q  212 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 269  Q
    ||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  17684769 ttgttggaataagccctaatagccaatctatgttgaatgggtttggctttgtatcatg 17684712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 328 - 512
Target Start/End: Original strand, 27925772 - 27925961
Alignment:
Q  328 tgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacat---taagtata--acttaattgtgagaccccattaaacataagg 422  Q
    |||||||||||||||||||||||||| |||||||  ||||  |||||| |||||||   ||||| |   ||||||| ||||||| |||||||||  |||     
T  27925772 tgttttgtttcaaaataataaagtccttagaataactagtatgtttaacggaacataattaagtgtgtgacttaatcgtgagactccattaaactaaaga 27925871  T
Q  423 aaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaactgatgat 512  Q
    ||| |||||| ||||||||  |||||||  ||| ||  ||||||| ||| |||| ||||| | |||||||||||| | ||||||||||||    
T  27925872 aaattattcttaaagtatctctagtcaaactttatttggaagtggtatagcattgaagcacaaagactattatgtggataaactgatgat 27925961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 213 - 267
Target Start/End: Original strand, 11651630 - 11651684
Alignment:
Q  213 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatca 267  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||    
T  11651630 tgttggagtaagccctaatagccaatctatattgattgagtttggctttgtatca 11651684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 212 - 269
Target Start/End: Complemental strand, 25537462 - 25537405
Alignment:
Q  212 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 269  Q
    |||||||| ||||||||||||||||||||||||||| || ||||||||||||||||||    
T  25537462 ttgttggattaagccctaatagccaatctatattgactgagtttggctttgtatcatg 25537405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 324 - 497
Target Start/End: Original strand, 8509941 - 8510115
Alignment:
Q  324 attttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgaga-ccccattaaacataagg 422  Q
    ||||| |||||||| ||||||||||||||  ||||||| ||||||  ||| ||||||||||| |||  |||||||| ||||| |||||||||| || |||    
T  8509941 attttattttgttttaaaataataaagtctatagaataattagtctatttgatggaacattatgtacgacttaattatgagacccccattaaatatgagg 8510040  T
Q  423 aaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgt 497  Q
    |   |||| | |||||||  ||||| ||| ||| ||  ||| || |||| ||||||| |||| ||||||||||||    
T  8510041 atgatattattaaagtatatgtagttaagctttattatgaaatgagatagcattaaaacataaagactattatgt 8510115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 343 - 512
Target Start/End: Complemental strand, 17850663 - 17850495
Alignment:
Q  343 taataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaacataaggaaactattctcaaagtatcc 442  Q
    |||||||||||||| ||||| ||||  ||||  |||||||||| |||  |||||||||||| | || |||||| | ||||| |||||||| ||| |||||    
T  17850663 taataaagtccctataatagctagtttgtttgttggaacattatgtaagacttaattgtgatatccaattaaaaacaaggacactattcttaaattatcc 17850564  T
Q  443 gtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaactgatgat 512  Q
     |||||||| ||| ||| |||||   ||| |||| ||| ||| |||||||||| | |||| |||||||||    
T  17850563 atagtcaagcttt-ttgtgaagtcaaataacattcaagtatatagactattatatgggtagactgatgat 17850495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 312 - 367
Target Start/End: Complemental strand, 31258120 - 31258065
Alignment:
Q  312 atttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagt 367  Q
    |||||||||||| |||||||||||||||||||||||||||| ||| |||| |||||    
T  31258120 atttctttattgcttttgttttgtttcaaaataataaagtctctaaaataattagt 31258065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 212 - 269
Target Start/End: Complemental strand, 13359569 - 13359512
Alignment:
Q  212 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 269  Q
    |||| ||| |||| |||||||||||||||||||| |||||||||| ||||||||||||    
T  13359569 ttgtgggagtaagtcctaatagccaatctatattcattgggtttgactttgtatcatg 13359512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 221 - 269
Target Start/End: Complemental strand, 16566611 - 16566563
Alignment:
Q  221 taagccctaatagccaatctatattgattgggtttggctttgtatcatg 269  Q
    |||||||||||||||||||||| ||||||| ||||| ||||||||||||    
T  16566611 taagccctaatagccaatctatgttgattgagtttgactttgtatcatg 16566563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 213 - 269
Target Start/End: Complemental strand, 189280 - 189221
Alignment:
Q  213 tgttggaataagccctaatagccaatcta---tattgattgggtttggctttgtatcatg 269  Q
    ||||||| ||||||||||||  |||||||   ||||||||||||||||||||||||||||    
T  189280 tgttggagtaagccctaataatcaatctagtatattgattgggtttggctttgtatcatg 189221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 227 - 269
Target Start/End: Complemental strand, 16394526 - 16394484
Alignment:
Q  227 ctaatagccaatctatattgattgggtttggctttgtatcatg 269  Q
    ||||||| |||||||||||||||| ||||| ||||||||||||    
T  16394526 ctaatagacaatctatattgattgagtttgactttgtatcatg 16394484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 321 - 386
Target Start/End: Complemental strand, 22259990 - 22259925
Alignment:
Q  321 ttgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaa 386  Q
    ||||||||||| |||| |||||||||||| |||||| ||||  |||||| ||||||  ||||||||    
T  22259990 ttgattttgttatgttgcaaaataataaactccctaaaataactagtccatttaatataacattaa 22259925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390 (Bit Score: 188; Significance: 1e-101; HSPs: 4)
Name: scaffold0390
Description:

Target: scaffold0390; HSP #1
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 305 - 512
Target Start/End: Complemental strand, 7141 - 6934
Alignment:
Q  305 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 404  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  7141 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaactgtgag 7042  T
Q  405 accccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaa 504  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| |    
T  7041 accctattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 6942  T
Q  505 ctgatgat 512  Q
    ||||||||    
T  6941 ctgatgat 6934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390; HSP #2
Raw Score: 180; E-Value: 6e-97
Query Start/End: Original strand, 305 - 512
Target Start/End: Complemental strand, 14157 - 13950
Alignment:
Q  305 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 404  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||    
T  14157 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctacaatagttagtccgtttaatggaacattaagtataacttaactgtgag 14058  T
Q  405 accccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaa 504  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||||||||||| ||||||||||||||||| |    
T  14057 accccattaaacataaggaaactattctcaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcataaagactattatgtaggtaga 13958  T
Q  505 ctgatgat 512  Q
    ||||||||    
T  13957 ctgatgat 13950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 212 - 269
Target Start/End: Complemental strand, 7234 - 7177
Alignment:
Q  212 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 269  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||    
T  7234 ttgttggaataagccctaatagccaatctatattgattgagtttggttttgtatcatg 7177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390; HSP #4
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 213 - 269
Target Start/End: Complemental strand, 14249 - 14193
Alignment:
Q  213 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 269  Q
    |||||||||||||||||||||||||||||||||||||| |||||| |||||||||||    
T  14249 tgttggaataagccctaatagccaatctatattgattgagtttggttttgtatcatg 14193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 188; Significance: 1e-101; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 305 - 512
Target Start/End: Original strand, 21940665 - 21940872
Alignment:
Q  305 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 404  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21940665 acaatgcatttctttattgattttgttttgtttcaaaataataaagttcctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 21940764  T
Q  405 accccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaa 504  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| |    
T  21940765 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 21940864  T
Q  505 ctgatgat 512  Q
    ||||||||    
T  21940865 ctgatgat 21940872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 168; E-Value: 8e-90
Query Start/End: Original strand, 307 - 502
Target Start/End: Original strand, 28554885 - 28555080
Alignment:
Q  307 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 406  Q
    |||||||||||||||||||||||||| |||||||||||||||| | |||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  28554885 aaggcatttctttattgattttgtttagtttcaaaataataaaatacctaaaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 28554984  T
Q  407 cccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggta 502  Q
    |||||||||||||| ||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28554985 cccattaaacataatgaaactattctaaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggta 28555080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 307 - 512
Target Start/End: Original strand, 22171491 - 22171694
Alignment:
Q  307 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 406  Q
    |||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  22171491 aaggcatttccttattgattttgttttatttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagac 22171590  T
Q  407 cccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaact 506  Q
    |||||||||||||  |||||||||||||||||||||||||||||| ||| ||||||||||| |||||||||||||||||||||||||||||||||| |||    
T  22171591 cccattaaacata--gaaactattctcaaagtatccgtagtcaagctttattgagaagtggaatatcattaaagcatagagactattatgtaggtagact 22171688  T
Q  507 gatgat 512  Q
    ||||||    
T  22171689 gatgat 22171694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 311 - 512
Target Start/End: Original strand, 6094129 - 6094330
Alignment:
Q  311 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 410  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  6094129 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccg 6094228  T
Q  411 ttaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaactgatg 510  Q
    |||||||||||||||||||| | |||||||| ||||||||| ||| ||||||||||||||||||||||||||||||||||||||| | |||| | |||||    
T  6094229 ttaaacataaggaaactatttttaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatatgggtagagtgatg 6094328  T
Q  511 at 512  Q
    ||    
T  6094329 at 6094330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 158; E-Value: 8e-84
Query Start/End: Original strand, 311 - 512
Target Start/End: Original strand, 24642655 - 24642856
Alignment:
Q  311 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 410  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||     
T  24642655 catttctttattgattttgttttgtttcaaaatcataaagtccctagaattgttagtccgtttaatggaacattaagtataacttaattgtgagaccccg 24642754  T
Q  411 ttaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaactgatg 510  Q
    |||||||||||||||||||||| ||||||| |||||||||| ||| |||||||||| ||||||||||||| |||||||||||||||| |||| |||||||    
T  24642755 ttaaacataaggaaactattcttaaagtattcgtagtcaagctttattgagaagtgagatatcattaaagtatagagactattatgtgggtagactgatg 24642854  T
Q  511 at 512  Q
    ||    
T  24642855 at 24642856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 311 - 438
Target Start/End: Original strand, 24636860 - 24636987
Alignment:
Q  311 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 410  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||     
T  24636860 catttctttcttgattttgttttgtttcaaaataataaagtccctagaatagttagtccttttaatggaacattaagtataacttaattgtgagaccccg 24636959  T
Q  411 ttaaacataaggaaactattctcaaagt 438  Q
    |||||||||||||||||||||| |||||    
T  24636960 ttaaacataaggaaactattcttaaagt 24636987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 213 - 269
Target Start/End: Original strand, 21940573 - 21940629
Alignment:
Q  213 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 269  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  21940573 tgttggaataagccctaatagccaatctatattgattggttttggctttgtatcatg 21940629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 213 - 269
Target Start/End: Original strand, 22070108 - 22070164
Alignment:
Q  213 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 269  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  22070108 tgttggaataagccctaatagccaatctatattgattgggtttggttttgtatcatg 22070164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 212 - 269
Target Start/End: Original strand, 22171395 - 22171452
Alignment:
Q  212 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 269  Q
    |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  22171395 ttgttggaataagccctaatagccaatctatattgattgggtttgattttgtatcatg 22171452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 212 - 265
Target Start/End: Original strand, 24642555 - 24642608
Alignment:
Q  212 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtat 265  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  24642555 ttgttggagtaagccctaatagccaatctatattgattgggtttggctttgtat 24642608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 213 - 269
Target Start/End: Original strand, 6094031 - 6094087
Alignment:
Q  213 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 269  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  6094031 tgttggagtaagccctaatagccaatctatattgattgagtttggctttgtatcatg 6094087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 212 - 269
Target Start/End: Original strand, 28554790 - 28554847
Alignment:
Q  212 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 269  Q
    |||||||| |||||||||||||||||||| | ||||||||||||||||||||||||||    
T  28554790 ttgttggagtaagccctaatagccaatctttgttgattgggtttggctttgtatcatg 28554847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 335 - 496
Target Start/End: Complemental strand, 32873019 - 32872857
Alignment:
Q  335 tttcaaaataataaagtccctagaatagttagtccgttta-atggaacattaagtataacttaattgtgagaccccattaaacataaggaaactattctc 433  Q
    ||||||||||||||||||| || |||||||  ||| |||| || ||||||||||||| |||||||||||||| | |||| || | |  || | || | |     
T  32873019 tttcaaaataataaagtccttataatagttcatccatttatatagaacattaagtatgacttaattgtgagatctcattgaaaagagtgacaatactatt 32872920  T
Q  434 aaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatg 496  Q
    ||| |||  ||||| ||| ||| ||| ||||||||||| ||| ||||||||||||||||||||    
T  32872919 aaaatatttgtagttaagatttattgtgaagtgggataacatcaaagcatagagactattatg 32872857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 69 - 147
Target Start/End: Complemental strand, 40755938 - 40755860
Alignment:
Q  69 aaatagacacacaaaatcagcataactttgcaaggatctataaaatcgagatcaaaacatgtgtacgtcaagctaaaat 147  Q
    |||||||||||||| | ||||||||| ||||||  ||||||||||||||||| |||| ||||||| ||| |||||||||    
T  40755938 aaatagacacacaataccagcataacattgcaaaaatctataaaatcgagataaaaaaatgtgtaagtcgagctaaaat 40755860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 317 - 509
Target Start/End: Complemental strand, 38232570 - 38232380
Alignment:
Q  317 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaac 416  Q
    ||||||||||||||||| ||||||||||||||| || ||||||||||||||| |||||||  |   ||| ||||||||||||  ||| || |||||||||    
T  38232570 tttattgattttgttttatttcaaaataataaa-tctctagaatagttagtctgtttaataaatttttaggtataacttaatcatgacactccattaaac 38232472  T
Q  417 ataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaactgat 509  Q
     |||  | | |||||| |||||||  ||||||||  ||| |||  ||||| ||||   |||||||||| | |||||| ||| |||| ||||||    
T  38232471 gtaa-aatagtattcttaaagtatttgtagtcaaactttattgtaaagtgagatagtcttaaagcataaaaactattttgtgggtagactgat 38232380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 326 - 384
Target Start/End: Original strand, 2375027 - 2375085
Alignment:
Q  326 tttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacatt 384  Q
    |||||||||||||||||||||||| |||||| |||| ||||||  ||||||||||||||    
T  2375027 tttgttttgtttcaaaataataaactccctataataattagtcaatttaatggaacatt 2375085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 343 - 406
Target Start/End: Original strand, 10920234 - 10920297
Alignment:
Q  343 taataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 406  Q
    ||||||| | ||||||||| |||||| ||||||||||||||||||||| | ||||| |||||||    
T  10920234 taataaaattcctagaataattagtctgtttaatggaacattaagtatgagttaatcgtgagac 10920297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 212 - 266
Target Start/End: Original strand, 2374946 - 2375000
Alignment:
Q  212 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatc 266  Q
    |||||||||||||||||||||   ||| | |||||||||| ||||||||||||||    
T  2374946 ttgttggaataagccctaataataaatatgtattgattggatttggctttgtatc 2375000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 250
Target Start/End: Original strand, 24636605 - 24636642
Alignment:
Q  213 tgttggaataagccctaatagccaatctatattgattg 250  Q
    ||||||| |||||| |||||||||||||||||||||||    
T  24636605 tgttggagtaagccataatagccaatctatattgattg 24636642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 188; Significance: 1e-101; HSPs: 12)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 305 - 512
Target Start/End: Complemental strand, 21330455 - 21330248
Alignment:
Q  305 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 404  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21330455 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 21330356  T
Q  405 accccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaa 504  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||  |    
T  21330355 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtgga 21330256  T
Q  505 ctgatgat 512  Q
    ||||||||    
T  21330255 ctgatgat 21330248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 305 - 512
Target Start/End: Original strand, 18796506 - 18796713
Alignment:
Q  305 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 404  Q
    |||||| |||| ||| || |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18796506 acaaggaatttatttgtttattttgttttgtttcaaaataacaaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 18796605  T
Q  405 accccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaa 504  Q
    ||| | || |||||||||| | |||||| ||| |||| ||||||||| ||| ||| ||||||| ||||||||||||||| ||||||||||||| |||| |    
T  18796606 acctcttttaacataaggatattattcttaaattatctgtagtcaagctttattgtgaagtggtatatcattaaagcattgagactattatgtgggtaga 18796705  T
Q  505 ctgatgat 512  Q
    ||||||||    
T  18796706 ctgatgat 18796713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 307 - 502
Target Start/End: Original strand, 18619807 - 18620001
Alignment:
Q  307 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 406  Q
    |||| |||||||| |||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||| |||||||| | |||||||| |||||     
T  18619807 aaggaatttctttgttgattttgttttgtttcaaaataataaagtccctataataattagtctgtttaatggagcattaagtgtgacttaattatgaga- 18619905  T
Q  407 cccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggta 502  Q
    ||||||||||| ||||| | |||||| |||||||| || |||||  ||| ||| |||  ||||||  ||||||||||| |||||||||||| ||||    
T  18619906 cccattaaacaaaaggatattattcttaaagtatctgtggtcaaactttattgtgaaaagggataatattaaagcatatagactattatgtgggta 18620001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 311 - 450
Target Start/End: Complemental strand, 19692737 - 19692598
Alignment:
Q  311 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 410  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| ||||||||||||||||||  | |||||||  ||||| | ||    
T  19692737 catttctttattgattttgttttgtttcaaaataatgaagtccctagaataattagtctgtttaatggaacattaagcctgacttaatcatgagatctca 19692638  T
Q  411 ttaaacataaggaaactattctcaaagtatccgtagtcaa 450  Q
    ||||||  ||||||| |||||| ||||||||| |||||||    
T  19692637 ttaaactaaaggaaattattcttaaagtatccttagtcaa 19692598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 370 - 497
Target Start/End: Original strand, 20977957 - 20978084
Alignment:
Q  370 gtttaatggaacattaagtataacttaattgtgagaccccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtggga 469  Q
    |||||||||||||||||| |||| |||||  ||||| ||||||||| ||||||||| |||||| |||  ||||||||||||| |||  || |||||| ||    
T  20977957 gtttaatggaacattaagaataatttaatcatgagatcccattaaaaataaggaaattattcttaaaacatccgtagtcaagctttaatgtgaagtgaga 20978056  T
Q  470 tatcattaaagcatagagactattatgt 497  Q
    ||||| ||||||||||||||||||||||    
T  20978057 tatcactaaagcatagagactattatgt 20978084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 213 - 269
Target Start/End: Complemental strand, 21330549 - 21330493
Alignment:
Q  213 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 269  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21330549 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 21330493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 339 - 512
Target Start/End: Original strand, 36270199 - 36270373
Alignment:
Q  339 aaaataataaagtccctagaatagttag-tccgtttaatggaacattaagtataacttaattgtgagaccccattaaacataaggaaactattctcaaag 437  Q
    |||||||||||||||||||||||||||| |   || |||| ||  |||||| | ||||||| |||||||  ||||||||| || || |||||||| |||     
T  36270199 aaaataataaagtccctagaatagttagtttacttaaatgaaatgttaagtgtgacttaatcgtgagacatcattaaacacaatgacactattcttaaaa 36270298  T
Q  438 tatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaactgatgat 512  Q
     ||||||| ||||| |||  || |||| |||||| |||||||| ||| |||||||| ||| |||| |||||||||    
T  36270299 catccgtaatcaagctttagtgtgaagagggataacattaaagtataaagactattgtgtgggtagactgatgat 36270373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 339 - 497
Target Start/End: Original strand, 18822115 - 18822275
Alignment:
Q  339 aaaataataaagtccctagaatagttagtccgttt-aatgg-aacattaagtataacttaattgtgagaccccattaaacataaggaaactattctcaaa 436  Q
    ||||||||||||||  |||||| |||||| ||||| ||||| || ||||||| |  |||||| ||||||| |||||||||| ||||| |||||||| |||    
T  18822115 aaaataataaagtctatagaattgttagttcgtttaaatggaaaaattaagtgtggcttaatcgtgagacaccattaaacacaaggacactattcttaaa 18822214  T
Q  437 gtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgt 497  Q
      ||  ||| ||||| |||  |  |||||||||||||||||||||| | ||| ||||||||    
T  18822215 acatatgtaatcaagctttagtttgaagtgggatatcattaaagcagatagattattatgt 18822275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 69 - 147
Target Start/End: Complemental strand, 23689139 - 23689061
Alignment:
Q  69 aaatagacacacaaaatcagcataactttgcaaggatctataaaatcgagatcaaaacatgtgtacgtcaagctaaaat 147  Q
    |||||||||||||| | || |||||| ||||||  |||||||||||||||||||||| || |||| ||| |||||||||    
T  23689139 aaatagacacacaataccatcataacattgcaaatatctataaaatcgagatcaaaaaatatgtaagtcgagctaaaat 23689061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 212 - 269
Target Start/End: Complemental strand, 19692830 - 19692773
Alignment:
Q  212 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 269  Q
    |||||||| |||||| ||||||||||||| |||| ||| ||||||| |||||||||||    
T  19692830 ttgttggagtaagccttaatagccaatctgtatttattaggtttggttttgtatcatg 19692773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 212 - 269
Target Start/End: Original strand, 18796411 - 18796470
Alignment:
Q  212 ttgttggaataagccctaatagccaatctata--ttgattgggtttggctttgtatcatg 269  Q
    |||||||| |||||||||| ||  ||||||||  ||||||| ||||||||||||||||||    
T  18796411 ttgttggattaagccctaacagaaaatctatatattgattgcgtttggctttgtatcatg 18796470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 341 - 496
Target Start/End: Complemental strand, 36802820 - 36802664
Alignment:
Q  341 aataataaagtccctagaatagttagtccgtttaa-tggaacattaagtataacttaattgtgagaccccattaaacataaggaaactattctcaaagta 439  Q
    ||||||||||||| | ||||||||| | ||||||| ||||| ||||| | | |||||||||  |||   ||||||||| || || | |||||| |||  |    
T  36802820 aataataaagtcctttgaatagttaattcgtttaaatggaatattaaatgttacttaattgcaagatatcattaaacacaatgacattattcttaaaaca 36802721  T
Q  440 tccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatg 496  Q
    |||||| ||||| ||   ||  |||||||||| |||||||||||| ||| |||||||    
T  36802720 tccgtaatcaagattcagtgtaaagtgggataacattaaagcatatagattattatg 36802664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0433 (Bit Score: 180; Significance: 6e-97; HSPs: 2)
Name: scaffold0433
Description:

Target: scaffold0433; HSP #1
Raw Score: 180; E-Value: 6e-97
Query Start/End: Original strand, 305 - 512
Target Start/End: Original strand, 7107 - 7314
Alignment:
Q  305 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 404  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  7107 acaaggtatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatagaacattaagtataacttaattgtgag 7206  T
Q  405 accccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaa 504  Q
    |||||||||||||||| ||||||||||| |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| |    
T  7207 accccattaaacataatgaaactattctaaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 7306  T
Q  505 ctgatgat 512  Q
    ||||||||    
T  7307 ctgatgat 7314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0433; HSP #2
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 212 - 269
Target Start/End: Original strand, 7014 - 7071
Alignment:
Q  212 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 269  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  7014 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 7071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 180; Significance: 6e-97; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 180; E-Value: 6e-97
Query Start/End: Original strand, 305 - 512
Target Start/End: Complemental strand, 24695673 - 24695466
Alignment:
Q  305 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 404  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24695673 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 24695574  T
Q  405 accccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaa 504  Q
    |||||||||||||||| ||||||||||| |||||||||||||||||| ||| |||||||||| ||||||| ||||||||||||||||||||||||||| |    
T  24695573 accccattaaacataatgaaactattctaaaagtatccgtagtcaagctttattgagaagtgagatatcaataaagcatagagactattatgtaggtaga 24695474  T
Q  505 ctgatgat 512  Q
    ||||||||    
T  24695473 ctgatgat 24695466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 305 - 512
Target Start/End: Complemental strand, 18570070 - 18569863
Alignment:
Q  305 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 404  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  18570070 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaattgaacattaagtataacttaattgtgag 18569971  T
Q  405 accccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaa 504  Q
    ||||| |||||||||||||||||| ||| |||||||||||||||||| ||| ||||||||||| |||||||||||||||| |||||||||||| |||| |    
T  18569970 accccgttaaacataaggaaactactcttaaagtatccgtagtcaagctttattgagaagtggaatatcattaaagcataaagactattatgttggtaga 18569871  T
Q  505 ctgatgat 512  Q
    ||||||||    
T  18569870 ctgatgat 18569863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 158; E-Value: 8e-84
Query Start/End: Original strand, 307 - 512
Target Start/End: Complemental strand, 19714703 - 19714498
Alignment:
Q  307 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 406  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19714703 aaggcatttctttattgattttgttttatttcaaagtaataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 19714604  T
Q  407 cccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaact 506  Q
    ||| |||||||||||||| ||||||| ||| |||||| ||||||| ||| ||||||||| ||||||||||||||||||||||||||||||| |||| |||    
T  19714603 cccgttaaacataaggaatctattcttaaaatatccgaagtcaagctttattgagaagtaggatatcattaaagcatagagactattatgtgggtagact 19714504  T
Q  507 gatgat 512  Q
    ||||||    
T  19714503 gatgat 19714498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 150; E-Value: 5e-79
Query Start/End: Original strand, 311 - 512
Target Start/End: Complemental strand, 19707419 - 19707218
Alignment:
Q  311 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 410  Q
    ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||     
T  19707419 catttctttattgattttgttttatttcaaagtaataaagtccctagaatagttagtcagtttaatggaacattaagtataacttaattgtgagaccccg 19707320  T
Q  411 ttaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaactgatg 510  Q
    |||||||||||||| ||||||| ||| |||||| ||||||| ||| ||||||||| ||||||||||||||||||||||||||||||| |||| |||||||    
T  19707319 ttaaacataaggaatctattcttaaaatatccgaagtcaagctttattgagaagtaggatatcattaaagcatagagactattatgtgggtagactgatg 19707220  T
Q  511 at 512  Q
    ||    
T  19707219 at 19707218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 310 - 493
Target Start/End: Complemental strand, 27347679 - 27347497
Alignment:
Q  310 gcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccc 409  Q
    |||||||||| |||||||||||||| |||||||||||||||||| ||||||| ||| || |||||||||| |||||||| | ||||||| |||||| |||    
T  27347679 gcatttctttgttgattttgttttgattcaaaataataaagtccttagaataattaatctgtttaatggagcattaagtgtgacttaatcgtgaga-ccc 27347581  T
Q  410 attaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactatt 493  Q
    |||||||  ||||| | |||||| |||||||  ||||||||| ||| ||| |||  |||||| |||||||||||||||||||||    
T  27347580 attaaacgaaaggacattattcttaaagtatatgtagtcaagctttattgtgaaaagggataacattaaagcatagagactatt 27347497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 311 - 497
Target Start/End: Complemental strand, 22547217 - 22547031
Alignment:
Q  311 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 410  Q
    ||||| |||||| |||||||||| ||| |||||||||||  | ||| ||||||||||| ||||||||||||||||||||||||||||| |||||| | ||    
T  22547217 catttatttattcattttgttttattttaaaataataaaaccgctataatagttagtcggtttaatggaacattaagtataacttaatcgtgagatctca 22547118  T
Q  411 ttaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgt 497  Q
    ||||| ||| ||| | |||| | ||||||| || ||||||  ||| ||| |||||| |||| |||||||  ||||||||||||||||    
T  22547117 ttaaatatatggacattatttttaaagtattcgcagtcaaactttattgtgaagtgagataacattaaaatatagagactattatgt 22547031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 305 - 414
Target Start/End: Original strand, 39537962 - 39538071
Alignment:
Q  305 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 404  Q
    ||||| |||||||||| ||||||||||||||||||||||  | |||||| |||||||||| || ||||||||||||||||||||||||||||||||||||    
T  39537962 acaagccatttctttaatgattttgttttgtttcaaaatggttaagtccttagaatagttggttcgtttaatggaacattaagtataacttaattgtgag 39538061  T
Q  405 accccattaa 414  Q
    ||| ||||||    
T  39538062 acctcattaa 39538071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 309 - 490
Target Start/End: Complemental strand, 17285935 - 17285754
Alignment:
Q  309 ggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccc 408  Q
    ||||||| ||||||||||||||| ||||||||||||||||  |||  ||||||||||||| ||||||||||||||||||| | ||||||| |||| ||||    
T  17285935 ggcatttatttattgattttgttatgtttcaaaataataatctccagagaatagttagtctgtttaatggaacattaagtgtgacttaatcgtgaaaccc 17285836  T
Q  409 cattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagact 490  Q
     | |||||  || || | |||||| ||||||| | ||||| |  ||| ||| ||| |||||||  ||||||||||| |||||    
T  17285835 tagtaaactaaatgacattattcttaaagtattcatagtcgatctttattgtgaattgggatagtattaaagcatatagact 17285754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 212 - 269
Target Start/End: Complemental strand, 24695766 - 24695709
Alignment:
Q  212 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 269  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24695766 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 24695709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 311 - 414
Target Start/End: Original strand, 31886537 - 31886640
Alignment:
Q  311 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 410  Q
    |||||||||| |||||||||||||||||||| ||||||||||| ||||||| ||||| | |||||| |||||| |||||  ||||||| ||||||| |||    
T  31886537 catttctttagtgattttgttttgtttcaaattaataaagtccttagaataattagttcatttaattgaacatcaagtacgacttaatcgtgagactcca 31886636  T
Q  411 ttaa 414  Q
    ||||    
T  31886637 ttaa 31886640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 213 - 269
Target Start/End: Complemental strand, 19714798 - 19714742
Alignment:
Q  213 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 269  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  19714798 tgttggagtaagccctaatagccaatctatattgattgggtttggctttgtatcatg 19714742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 309 - 490
Target Start/End: Complemental strand, 17299088 - 17298907
Alignment:
Q  309 ggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccc 408  Q
    ||||||| ||||||||||||||| |||||  |||||||||  |||  ||||||||||||||| |||||||||||||||||   ||||||| |||| ||||    
T  17299088 ggcatttatttattgattttgttatgtttataaataataatatccagagaatagttagtccgattaatggaacattaagtgcgacttaatcgtgaaaccc 17298989  T
Q  409 cattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagact 490  Q
     | |||||  || || | |||||| ||||||| | ||||| |  ||| |||  ||||||||||  ||||||||||| |||||    
T  17298988 tagtaaactaaatgacattattcttaaagtattcatagtcgatctttattgttaagtgggatagtattaaagcatatagact 17298907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 212 - 269
Target Start/End: Complemental strand, 19707519 - 19707462
Alignment:
Q  212 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 269  Q
    |||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  19707519 ttgttggagtaagccctaatagccaatctatattgattgagtttggctttgtatcatg 19707462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 213 - 269
Target Start/End: Complemental strand, 27347778 - 27347722
Alignment:
Q  213 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 269  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  27347778 tgttggagtaagccctaatagccaatctatattgattgcgtttggctttgtatcatg 27347722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 371 - 512
Target Start/End: Complemental strand, 18807175 - 18807034
Alignment:
Q  371 tttaatggaacattaagtataacttaattgtgagaccccattaaacataa-ggaaactattctcaaagtatccgtagtcaagttttgttgagaagtggga 469  Q
    |||||||||||||||||| | ||||||| ||||||| |||||||| |||| ||| | |||||| ||||||||  ||||||||  || ||| |||||  ||    
T  18807175 tttaatggaacattaagtgtgacttaatcgtgagacaccattaaa-ataatggacattattcttaaagtatctatagtcaagcgttattgtgaagtaaga 18807077  T
Q  470 tatcattaaagcatagagactattatgtaggtaaactgatgat 512  Q
    || || |||||||||||||||||||||  |||| |||||||||    
T  18807076 taacaataaagcatagagactattatgcgggtagactgatgat 18807034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 418 - 510
Target Start/End: Original strand, 39538701 - 39538793
Alignment:
Q  418 taaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaactgatg 510  Q
    |||||| |||||||| ||| ||||| |||| ||| ||| ||| |||||||||||||||||||||||  |||||||||||| |||| |||||||    
T  39538701 taaggacactattcttaaaatatccatagttaagctttattgtgaagtgggatatcattaaagcatgaagactattatgtgggtagactgatg 39538793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 331 - 421
Target Start/End: Complemental strand, 33477479 - 33477389
Alignment:
Q  331 tttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaacataag 421  Q
    ||||||||||||||||||||||| || ||||||||| | | |||||||| |||||||| | |  |||| |||||||| |||||| ||||||    
T  33477479 tttgtttcaaaataataaagtccttacaatagttaggctgattaatggatcattaagtgtgatctaatcgtgagacctcattaatcataag 33477389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 212 - 269
Target Start/End: Complemental strand, 18570165 - 18570108
Alignment:
Q  212 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 269  Q
    ||||| || ||||| |||||||| |||||||||| |||||||||||||||||||||||    
T  18570165 ttgttcgagtaagctctaatagctaatctatattaattgggtttggctttgtatcatg 18570108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 213 - 268
Target Start/End: Original strand, 39537870 - 39537925
Alignment:
Q  213 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcat 268  Q
    ||||||| |||||||||||||||||||||| |||| || |||| ||||||||||||    
T  39537870 tgttggattaagccctaatagccaatctatgttgactgagtttagctttgtatcat 39537925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 69 - 147
Target Start/End: Complemental strand, 19183716 - 19183638
Alignment:
Q  69 aaatagacacacaaaatcagcataactttgcaaggatctataaaatcgagatcaaaacatgtgtacgtcaagctaaaat 147  Q
    |||||||||||||| | ||| ||||  ||||||  |||||||||||| ||||||||| ||||||| ||| |||||||||    
T  19183716 aaatagacacacaataccagtataaaattgcaaaaatctataaaatcaagatcaaaaaatgtgtaagtcgagctaaaat 19183638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 355 - 423
Target Start/End: Original strand, 11479420 - 11479489
Alignment:
Q  355 tagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccc-cattaaacataagga 423  Q
    ||||||| |||||  |||||||| || ||||||| | |||| |||||||||||| |||||||||||||||    
T  11479420 tagaataattagtgtgtttaatgaaatattaagtgtgacttgattgtgagaccctcattaaacataagga 11479489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0657 (Bit Score: 176; Significance: 1e-94; HSPs: 2)
Name: scaffold0657
Description:

Target: scaffold0657; HSP #1
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 305 - 512
Target Start/End: Original strand, 993 - 1200
Alignment:
Q  305 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 404  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||    
T  993 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctaaaatagttagtccgtttaatgaaacattaagtataacttaattgtgag 1092  T
Q  405 accccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaa 504  Q
    |||||||||||||||| |||||||||||||||||||| ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| |    
T  1093 accccattaaacataaagaaactattctcaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 1192  T
Q  505 ctgatgat 512  Q
    ||||||||    
T  1193 ctgatgat 1200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0657; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 213 - 269
Target Start/End: Original strand, 901 - 957
Alignment:
Q  213 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 269  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  901 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186 (Bit Score: 172; Significance: 3e-92; HSPs: 2)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 305 - 512
Target Start/End: Complemental strand, 26197 - 25990
Alignment:
Q  305 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 404  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  26197 acaagacatttctttattgattttgttttgtttcaaaataataaagtccttagaatagttagtccatttaatggaacattaaatataacttaattgtgag 26098  T
Q  405 accccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaa 504  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| |||||||||||||||||||||||| |||||||||||||||| |    
T  26097 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgaaaagtgggatatcattaaagcatagcgactattatgtaggtaga 25998  T
Q  505 ctgatgat 512  Q
    ||||||||    
T  25997 ctgatgat 25990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 212 - 268
Target Start/End: Complemental strand, 26287 - 26231
Alignment:
Q  212 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcat 268  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  26287 ttgttggaataagccctaatagtcaatctatattgattgggtttggctttgtatcat 26231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 158; Significance: 8e-84; HSPs: 2)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 158; E-Value: 8e-84
Query Start/End: Original strand, 307 - 512
Target Start/End: Original strand, 5531 - 5736
Alignment:
Q  307 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 406  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5531 aaggcatttctttattgatttatttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 5630  T
Q  407 cccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaaact 506  Q
    ||| ||||||||||||||| |||||| |||||||  ||||||||| ||| |||||||||||||||||||||||||||| |||||||||||| |||| |||    
T  5631 cccgttaaacataaggaaattattcttaaagtatatgtagtcaagctttattgagaagtgggatatcattaaagcataaagactattatgtgggtagact 5730  T
Q  507 gatgat 512  Q
    ||||||    
T  5731 gatgat 5736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 212 - 269
Target Start/End: Original strand, 5435 - 5492
Alignment:
Q  212 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 269  Q
    |||||| | |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  5435 ttgttgaagtaagccctaatagccaatctatattgtttgggtttggctttgtatcatg 5492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 138; Significance: 7e-72; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 138; E-Value: 7e-72
Query Start/End: Original strand, 307 - 488
Target Start/End: Complemental strand, 230545 - 230365
Alignment:
Q  307 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 406  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | || |||||||||||||||||||||||||||||||||||||||||||||||||    
T  230545 aaggcatttctttattgattttgttttgtttcaaaataataaagttcttataatagttagtccgtttaatggaacattaagtataacttaattgtgagac 230446  T
Q  407 cccattaaacataaggaaactattctcaaagtatccgtagtcaagttttgttgagaagtgggatatcattaaagcatagaga 488  Q
    ||| |||||||||||||||| ||||| |||||||  ||||||||| ||| ||||||||||||||||||||||||||||||||    
T  230445 ccc-ttaaacataaggaaaccattcttaaagtatttgtagtcaagatttattgagaagtgggatatcattaaagcatagaga 230365  T

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Target: scaffold0008; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 213 - 269
Target Start/End: Complemental strand, 230640 - 230584
Alignment:
Q  213 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 269  Q
    ||||||| |||||  ||||||||||||||||||||||||||||||||||||||||||    
T  230640 tgttggagtaagcaataatagccaatctatattgattgggtttggctttgtatcatg 230584  T

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Target: scaffold0176 (Bit Score: 61; Significance: 6e-26; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 305 - 369
Target Start/End: Complemental strand, 8510 - 8446
Alignment:
Q  305 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtcc 369  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8510 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtcc 8446  T

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Target: scaffold0176; HSP #2
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 212 - 269
Target Start/End: Complemental strand, 8603 - 8546
Alignment:
Q  212 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 269  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  8603 ttgttggaataagccctaatagccaatctatattgattgggttcggctttgtatcatg 8546  T

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Target: scaffold0203 (Bit Score: 58; Significance: 4e-24; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 212 - 269
Target Start/End: Complemental strand, 23826 - 23769
Alignment:
Q  212 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 269  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23826 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 23769  T

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Target: scaffold0326 (Bit Score: 54; Significance: 9e-22; HSPs: 2)
Name: scaffold0326
Description:

Target: scaffold0326; HSP #1
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 212 - 269
Target Start/End: Original strand, 16522 - 16579
Alignment:
Q  212 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 269  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  16522 ttgttggaataagccctaatagccaatctatattgattgggtttggctttatatcatg 16579  T

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Target: scaffold0326; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 305 - 338
Target Start/End: Original strand, 16615 - 16648
Alignment:
Q  305 acaaggcatttctttattgattttgttttgtttc 338  Q
    |||||||||||||||||||||||||||||| |||    
T  16615 acaaggcatttctttattgattttgttttgnttc 16648  T

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Target: scaffold0705 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0705
Description:

Target: scaffold0705; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 212 - 269
Target Start/End: Complemental strand, 98 - 41
Alignment:
Q  212 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 269  Q
    |||||||||||||||||||||||||||||||| ||||||  |||||||||||||||||    
T  98 ttgttggaataagccctaatagccaatctataatgattgattttggctttgtatcatg 41  T

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Target: scaffold0637 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0637
Description:

Target: scaffold0637; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 213 - 269
Target Start/End: Original strand, 8944 - 9000
Alignment:
Q  213 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 269  Q
    ||||||||||||||| |||||||||||||| |||| |||||||||||||||||||||    
T  8944 tgttggaataagcccaaatagccaatctatgttgaatgggtttggctttgtatcatg 9000  T

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Target: scaffold0565 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 2)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 215 - 269
Target Start/End: Complemental strand, 10256 - 10202
Alignment:
Q  215 ttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 269  Q
    ||||| ||||| |||||||||||||||||||||||| ||||| ||||||||||||    
T  10256 ttggagtaagctctaatagccaatctatattgattgagtttgactttgtatcatg 10202  T

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Target: scaffold0565; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 324 - 355
Target Start/End: Complemental strand, 10158 - 10127
Alignment:
Q  324 attttgttttgtttcaaaataataaagtccct 355  Q
    ||||||||||||||||||||||||||||||||    
T  10158 attttgttttgtttcaaaataataaagtccct 10127  T

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Target: scaffold0767 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0767
Description:

Target: scaffold0767; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 213 - 249
Target Start/End: Complemental strand, 37 - 1
Alignment:
Q  213 tgttggaataagccctaatagccaatctatattgatt 249  Q
    |||||||||||||||||||||||||||||||||||||    
T  37 tgttggaataagccctaatagccaatctatattgatt 1  T

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Target: scaffold0267 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0267
Description:

Target: scaffold0267; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 69 - 145
Target Start/End: Original strand, 8615 - 8691
Alignment:
Q  69 aaatagacacacaaaatcagcataactttgcaaggatctataaaatcgagatcaaaacatgtgtacgtcaagctaaa 145  Q
    |||||||||||||| | ||||||||| ||||||  ||||||||||||| ||||||||| | |||| ||| |||||||    
T  8615 aaatagacacacaataccagcataacattgcaaaaatctataaaatcgtgatcaaaacttctgtaagtcgagctaaa 8691  T

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Target: scaffold0170 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 212 - 265
Target Start/End: Original strand, 5877 - 5930
Alignment:
Q  212 ttgttggaataagccctaatagccaatctatattgattgggtttggctttgtat 265  Q
    |||||||| |||| | ||||||||||||||||||||||| ||||| ||||||||    
T  5877 ttgttggagtaagtcataatagccaatctatattgattgagtttgactttgtat 5930  T

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Target: scaffold0650 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 72 - 147
Target Start/End: Complemental strand, 6591 - 6516
Alignment:
Q  72 tagacacacaaaatcagcataactttgcaaggatctataaaatcgagatcaaaacatgtgtacgtcaagctaaaat 147  Q
    ||||||||||| | ||||||||| ||||||  ||||||||||||||||| |||| | ||||| ||  |||||||||    
T  6591 tagacacacaataccagcataacattgcaaaaatctataaaatcgagataaaaaaaagtgtaagttgagctaaaat 6516  T

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Target: scaffold0032 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 334 - 406
Target Start/End: Original strand, 92194 - 92267
Alignment:
Q  334 gtttcaaaataataaagtccctagaatagttagtccgtttaa-tggaacattaagtataacttaattgtgagac 406  Q
    |||| ||| |||||||||| ||||||||  ||||   ||||| ||||||||||||||||||||||| |||||||    
T  92194 gttttaaagtaataaagtctctagaatatctagttattttaaatggaacattaagtataacttaatcgtgagac 92267  T

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Target: scaffold0453 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 69 - 133
Target Start/End: Complemental strand, 9460 - 9396
Alignment:
Q  69 aaatagacacacaaaatcagcataactttgcaaggatctataaaatcgagatcaaaacatgtgta 133  Q
    |||||||||||||| | ||||||||| ||||||  || ||||||||| | ||||||| |||||||    
T  9460 aaatagacacacaataccagcataacattgcaaaaatttataaaatcaaaatcaaaaaatgtgta 9396  T

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