View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15962_high_121 (Length: 240)
Name: NF15962_high_121
Description: NF15962
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15962_high_121 |
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Alignment Details
Target: chr2 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 16 - 216
Target Start/End: Complemental strand, 38279174 - 38278974
Alignment:
| Q |
16 |
attaagaaaaaacgaacttaaatcaagtcatcaaccctacacaataccagacacttttccaccctataagcaactccaaagagcagtaaccactaaccat |
115 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38279174 |
attaagaaaaaacgaacttaaatcaagtcatcaaccctacacaataccagacacttttccaccctataagcaactccaaagagcagtaaccactaaccat |
38279075 |
T |
|
| Q |
116 |
tcagagaatgttatcatttctaaactcaaacatccaaattaaacttgggcctctatcctatggttgaataataagcagtttcagttctttcctaaatcta |
215 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
38279074 |
tcagagaatgttatcatttctaaactcaaacatccaaattaaacttgggcctctatcctatggttgaataataagcagtttcagttctttcttaaatcta |
38278975 |
T |
|
| Q |
216 |
t |
216 |
Q |
| |
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| |
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| T |
38278974 |
t |
38278974 |
T |
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