View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15962_high_142 (Length: 209)

Name: NF15962_high_142
Description: NF15962
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15962_high_142
NF15962_high_142
[»] chr3 (51 HSPs)
chr3 (45-209)||(44377781-44377941)
chr3 (46-209)||(35846747-35846906)
chr3 (46-209)||(51754423-51754582)
chr3 (46-209)||(1546154-1546313)
chr3 (46-209)||(24348803-24348962)
chr3 (47-209)||(48458387-48458545)
chr3 (46-186)||(51167166-51167306)
chr3 (47-186)||(22497241-22497380)
chr3 (45-209)||(30357250-30357410)
chr3 (46-209)||(37126601-37126760)
chr3 (46-209)||(38252519-38252678)
chr3 (46-209)||(43973201-43973360)
chr3 (46-186)||(10659526-10659666)
chr3 (46-186)||(13286930-13287070)
chr3 (46-186)||(20607680-20607820)
chr3 (47-186)||(17338468-17338607)
chr3 (47-186)||(43218757-43218896)
chr3 (46-209)||(5273550-5273709)
chr3 (46-209)||(10049085-10049244)
chr3 (46-209)||(10471324-10471483)
chr3 (45-209)||(2445960-2446120)
chr3 (45-209)||(8828586-8828746)
chr3 (49-209)||(23150742-23150898)
chr3 (45-209)||(27449490-27449650)
chr3 (46-186)||(31655045-31655185)
chr3 (45-209)||(9745943-9746102)
chr3 (46-209)||(12227720-12227880)
chr3 (57-209)||(49804831-49804979)
chr3 (47-169)||(26717973-26718095)
chr3 (46-209)||(37821062-37821220)
chr3 (46-209)||(55274117-55274276)
chr3 (46-209)||(46528090-46528257)
chr3 (47-209)||(53018982-53019140)
chr3 (46-186)||(47697768-47697913)
chr3 (45-186)||(998307-998448)
chr3 (46-186)||(8068511-8068651)
chr3 (58-182)||(41114097-41114221)
chr3 (57-209)||(24405782-24405938)
chr3 (45-186)||(28555157-28555297)
chr3 (47-186)||(41454247-41454386)
chr3 (46-209)||(3019202-3019360)
chr3 (46-209)||(26975445-26975595)
chr3 (46-208)||(26229372-26229522)
chr3 (47-186)||(35513049-35513188)
chr3 (80-150)||(33591124-33591194)
chr3 (47-144)||(501740-501837)
chr3 (47-115)||(5218974-5219042)
chr3 (47-117)||(9126350-9126419)
chr3 (47-117)||(9134457-9134526)
chr3 (49-85)||(9116495-9116531)
chr3 (57-93)||(31608390-31608426)
[»] chr1 (49 HSPs)
chr1 (45-209)||(28226310-28226470)
chr1 (46-209)||(50490802-50490961)
chr1 (45-186)||(3770503-3770644)
chr1 (47-209)||(25828677-25828835)
chr1 (46-186)||(26770111-26770251)
chr1 (46-209)||(15475947-15476106)
chr1 (46-209)||(28068796-28068955)
chr1 (47-209)||(40359667-40359825)
chr1 (47-209)||(46674745-46674903)
chr1 (46-183)||(48542541-48542678)
chr1 (45-209)||(37094119-37094279)
chr1 (46-209)||(42885267-42885426)
chr1 (46-186)||(44054803-44054943)
chr1 (47-186)||(13556077-13556216)
chr1 (57-209)||(15907250-15907398)
chr1 (48-186)||(18604860-18604998)
chr1 (46-209)||(45502320-45502478)
chr1 (47-209)||(47534001-47534159)
chr1 (46-186)||(44234012-44234154)
chr1 (57-186)||(30361166-30361295)
chr1 (46-186)||(35719710-35719851)
chr1 (46-186)||(6978902-6979042)
chr1 (46-186)||(30159013-30159153)
chr1 (46-186)||(52469419-52469559)
chr1 (45-209)||(8895621-8895780)
chr1 (46-209)||(46234299-46234458)
chr1 (46-186)||(24180546-24180687)
chr1 (46-186)||(31760688-31760828)
chr1 (45-209)||(49456837-49456997)
chr1 (46-209)||(3046762-3046921)
chr1 (46-209)||(3994837-3994995)
chr1 (45-186)||(4490127-4490268)
chr1 (57-169)||(3416316-3416428)
chr1 (46-186)||(17580869-17581009)
chr1 (46-173)||(20599594-20599721)
chr1 (47-209)||(25729897-25730045)
chr1 (47-186)||(17926177-17926315)
chr1 (57-209)||(43106497-43106652)
chr1 (47-186)||(49740086-49740225)
chr1 (57-182)||(8969476-8969601)
chr1 (47-182)||(7042846-7042982)
chr1 (97-186)||(29033651-29033740)
chr1 (46-126)||(11335634-11335714)
chr1 (46-126)||(11493654-11493734)
chr1 (47-178)||(17136897-17137028)
chr1 (47-116)||(12320252-12320321)
chr1 (152-209)||(11335584-11335637)
chr1 (152-209)||(11493604-11493657)
chr1 (48-96)||(45926252-45926300)
[»] chr7 (31 HSPs)
chr7 (46-209)||(9741198-9741357)
chr7 (46-186)||(18676747-18676887)
chr7 (46-209)||(12848441-12848600)
chr7 (46-209)||(31587890-31588049)
chr7 (46-209)||(41118749-41118908)
chr7 (46-209)||(47455051-47455210)
chr7 (47-186)||(40431266-40431405)
chr7 (46-209)||(3887671-3887830)
chr7 (46-209)||(5544276-5544435)
chr7 (46-209)||(12726190-12726349)
chr7 (46-186)||(44508504-44508645)
chr7 (57-209)||(31621948-31622096)
chr7 (47-186)||(42076336-42076475)
chr7 (46-209)||(44291053-44291212)
chr7 (46-187)||(40186696-40186837)
chr7 (57-186)||(44061820-44061949)
chr7 (45-186)||(47020460-47020601)
chr7 (47-169)||(42697408-42697530)
chr7 (46-168)||(30888401-30888523)
chr7 (46-209)||(38743201-38743354)
chr7 (47-186)||(3112066-3112205)
chr7 (45-209)||(9870374-9870534)
chr7 (113-209)||(25105043-25105135)
chr7 (56-126)||(40190120-40190189)
chr7 (47-87)||(39494886-39494926)
chr7 (49-143)||(27419067-27419161)
chr7 (47-186)||(38168048-38168177)
chr7 (48-102)||(34012058-34012115)
chr7 (57-107)||(10242424-10242474)
chr7 (48-96)||(21278297-21278345)
chr7 (48-112)||(25065987-25066050)
[»] chr6 (26 HSPs)
chr6 (46-209)||(4169665-4169824)
chr6 (46-209)||(4210394-4210553)
chr6 (46-186)||(17595855-17595995)
chr6 (46-209)||(33489793-33489952)
chr6 (46-186)||(10790492-10790632)
chr6 (47-209)||(5545373-5545532)
chr6 (48-209)||(742823-742980)
chr6 (47-209)||(8933777-8933935)
chr6 (49-186)||(33131124-33131261)
chr6 (45-186)||(34475143-34475284)
chr6 (47-186)||(32938392-32938531)
chr6 (46-209)||(8658988-8659150)
chr6 (46-209)||(18676675-18676834)
chr6 (45-186)||(8062789-8062930)
chr6 (46-209)||(28914101-28914256)
chr6 (47-186)||(12713077-12713216)
chr6 (46-183)||(29516666-29516803)
chr6 (47-186)||(11590248-11590387)
chr6 (57-186)||(9224609-9224738)
chr6 (47-180)||(9576031-9576164)
chr6 (47-182)||(2559732-2559866)
chr6 (108-209)||(29863900-29863997)
chr6 (58-186)||(8313748-8313876)
chr6 (47-142)||(20554819-20554914)
chr6 (47-186)||(25144075-25144205)
chr6 (50-92)||(13889149-13889191)
[»] chr5 (23 HSPs)
chr5 (46-209)||(3390799-3390958)
chr5 (46-209)||(33591662-33591821)
chr5 (46-209)||(42675626-42675785)
chr5 (45-209)||(10691878-10692038)
chr5 (47-186)||(36484587-36484726)
chr5 (45-209)||(8836499-8836658)
chr5 (45-209)||(18185761-18185920)
chr5 (45-209)||(35066012-35066171)
chr5 (47-209)||(42221727-42221885)
chr5 (46-209)||(41743328-41743487)
chr5 (46-207)||(8335319-8335476)
chr5 (45-209)||(25031423-25031583)
chr5 (46-209)||(6230224-6230383)
chr5 (46-182)||(23191874-23192010)
chr5 (47-209)||(29296188-29296347)
chr5 (46-186)||(28349034-28349174)
chr5 (46-186)||(15472648-15472793)
chr5 (16-186)||(27771246-27771416)
chr5 (57-169)||(1420980-1421092)
chr5 (47-186)||(8782670-8782809)
chr5 (47-166)||(33570076-33570195)
chr5 (47-145)||(8935914-8936012)
chr5 (47-186)||(25472276-25472415)
[»] chr4 (40 HSPs)
chr4 (46-209)||(39677633-39677792)
chr4 (46-209)||(22169110-22169269)
chr4 (47-209)||(11005580-11005738)
chr4 (47-186)||(49332079-49332218)
chr4 (47-186)||(56162475-56162614)
chr4 (46-209)||(28867643-28867802)
chr4 (47-209)||(2491833-2491991)
chr4 (47-209)||(45884560-45884718)
chr4 (49-186)||(50621666-50621803)
chr4 (46-186)||(24744937-24745077)
chr4 (49-209)||(36308931-36309087)
chr4 (47-186)||(54202332-54202471)
chr4 (47-209)||(27767564-27767721)
chr4 (49-186)||(29923605-29923742)
chr4 (46-186)||(17445607-17445747)
chr4 (45-209)||(36225061-36225221)
chr4 (46-209)||(3875593-3875752)
chr4 (46-209)||(36432415-36432573)
chr4 (46-209)||(3931916-3932076)
chr4 (45-209)||(55282401-55282560)
chr4 (46-209)||(33961729-33961888)
chr4 (45-209)||(7327624-7327784)
chr4 (46-209)||(7554368-7554527)
chr4 (48-169)||(35949466-35949587)
chr4 (46-186)||(3874517-3874657)
chr4 (47-209)||(26488353-26488512)
chr4 (45-209)||(20492503-20492663)
chr4 (47-169)||(29933497-29933619)
chr4 (47-169)||(43957823-43957945)
chr4 (57-169)||(55541836-55541948)
chr4 (47-186)||(11308768-11308907)
chr4 (56-209)||(41764618-41764766)
chr4 (57-183)||(44878054-44878180)
chr4 (46-209)||(28573709-28573855)
chr4 (57-186)||(11381867-11381995)
chr4 (47-178)||(7326393-7326525)
chr4 (48-96)||(15506585-15506633)
chr4 (52-186)||(41476629-41476763)
chr4 (47-111)||(7795306-7795368)
chr4 (150-178)||(16319341-16319369)
[»] chr2 (25 HSPs)
chr2 (46-209)||(21866950-21867109)
chr2 (46-209)||(11124300-11124459)
chr2 (46-186)||(14287437-14287577)
chr2 (46-186)||(30787129-30787269)
chr2 (45-209)||(2372059-2372219)
chr2 (47-209)||(19390538-19390696)
chr2 (47-186)||(2380277-2380416)
chr2 (45-209)||(26479819-26479979)
chr2 (46-186)||(17977732-17977873)
chr2 (47-209)||(12242744-12242904)
chr2 (57-209)||(2357349-2357497)
chr2 (46-209)||(20115062-20115221)
chr2 (46-209)||(25336525-25336684)
chr2 (46-186)||(33965431-33965571)
chr2 (46-186)||(4049460-4049599)
chr2 (46-186)||(41568692-41568832)
chr2 (46-186)||(8113688-8113832)
chr2 (46-183)||(6034412-6034550)
chr2 (46-179)||(31547267-31547400)
chr2 (49-186)||(39430245-39430382)
chr2 (46-182)||(11978763-11978899)
chr2 (49-157)||(1222638-1222746)
chr2 (47-91)||(17435356-17435400)
chr2 (48-96)||(35006460-35006508)
chr2 (48-91)||(43652933-43652976)
[»] chr8 (29 HSPs)
chr8 (46-186)||(35393505-35393645)
chr8 (46-186)||(8352380-8352520)
chr8 (46-209)||(11020403-11020562)
chr8 (47-209)||(38098749-38098907)
chr8 (46-186)||(27719242-27719382)
chr8 (49-209)||(30655004-30655160)
chr8 (45-183)||(29997493-29997631)
chr8 (46-209)||(36781652-36781811)
chr8 (46-186)||(25487208-25487348)
chr8 (46-209)||(33411045-33411205)
chr8 (47-169)||(45084246-45084368)
chr8 (45-186)||(30700000-30700141)
chr8 (46-209)||(483122-483281)
chr8 (46-209)||(20187472-20187631)
chr8 (46-209)||(20206541-20206700)
chr8 (46-186)||(39780312-39780453)
chr8 (47-186)||(5458261-5458399)
chr8 (46-186)||(26416283-26416423)
chr8 (45-209)||(24757733-24757892)
chr8 (46-209)||(12986671-12986828)
chr8 (48-186)||(1104929-1105066)
chr8 (49-166)||(32834592-32834709)
chr8 (46-154)||(20818955-20819063)
chr8 (45-209)||(31097514-31097665)
chr8 (71-186)||(18574818-18574934)
chr8 (47-142)||(13174239-13174334)
chr8 (71-182)||(20524967-20525077)
chr8 (48-91)||(16584425-16584468)
chr8 (58-92)||(29225979-29226013)
[»] scaffold0041 (1 HSPs)
scaffold0041 (46-209)||(105673-105832)
[»] scaffold0562 (2 HSPs)
scaffold0562 (46-209)||(6412-6571)
scaffold0562 (46-186)||(5336-5476)
[»] scaffold1360 (1 HSPs)
scaffold1360 (46-209)||(911-1071)
[»] scaffold0189 (1 HSPs)
scaffold0189 (47-169)||(27815-27937)
[»] scaffold0081 (1 HSPs)
scaffold0081 (47-186)||(11112-11251)
[»] scaffold0057 (1 HSPs)
scaffold0057 (45-186)||(42668-42806)
[»] scaffold0548 (1 HSPs)
scaffold0548 (47-186)||(5258-5397)
[»] scaffold0237 (1 HSPs)
scaffold0237 (108-209)||(19597-19694)
[»] scaffold0025 (1 HSPs)
scaffold0025 (46-119)||(20394-20467)


Alignment Details
Target: chr3 (Bit Score: 140; Significance: 2e-73; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 45 - 209
Target Start/End: Original strand, 44377781 - 44377941
Alignment:
Q  45 taagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccc 144  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44377781 taagttacacctaaatttatttaaaattttacaataataccaaaattgctctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccc 44377880  T
Q  145 ttaccccctttcatccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatcttt 209  Q
    |||||||||||||||||||||||||||||||||||    |||||||||||||||||| |||||||    
T  44377881 ttaccccctttcatccacaaatcaccatagatgtg----caaccaatatctgaatcaacatcttt 44377941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 46 - 209
Target Start/End: Original strand, 35846747 - 35846906
Alignment:
Q  46 aagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccct 145  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  35846747 aagttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccct 35846846  T
Q  146 taccccctttcatccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatcttt 209  Q
    ||||||||||||||||||||||||||||||||||    |||||||||||||||||| |||||||    
T  35846847 taccccctttcatccacaaatcaccatagatgtg----caaccaatatctgaatcaacatcttt 35846906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 46 - 209
Target Start/End: Original strand, 51754423 - 51754582
Alignment:
Q  46 aagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccct 145  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  51754423 aagttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccct 51754522  T
Q  146 taccccctttcatccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatcttt 209  Q
    ||||||||||||||||||||||||||||||||||    |||||||||||||||||| |||||||    
T  51754523 taccccctttcatccacaaatcaccatagatgtg----caaccaatatctgaatcaacatcttt 51754582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 46 - 209
Target Start/End: Complemental strand, 1546313 - 1546154
Alignment:
Q  46 aagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccct 145  Q
    |||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  1546313 aagttacacccaaatttatttaaaattttacaataatatcaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccct 1546214  T
Q  146 taccccctttcatccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatcttt 209  Q
    |||||||||||||||||||||||||||||||||||||    ||||||||||||||| |||||||    
T  1546213 taccccctttcatccacaaatcaccatagatgtgcaa----ccaatatctgaatcaacatcttt 1546154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 46 - 209
Target Start/End: Original strand, 24348803 - 24348962
Alignment:
Q  46 aagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccct 145  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  24348803 aagttacacccaaatttatttaaaattttacaataataccaaaattgccatcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccct 24348902  T
Q  146 taccccctttcatccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatcttt 209  Q
    ||||||||||||||||||||||||||||||||||    |||||||||||||||||| |||||||    
T  24348903 taccccctttcatccacaaatcaccatagatgtg----caaccaatatctgaatcaacatcttt 24348962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 130; E-Value: 1e-67
Query Start/End: Original strand, 47 - 209
Target Start/End: Original strand, 48458387 - 48458545
Alignment:
Q  47 agttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccctt 146  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  48458387 agttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcgttctgaaccctt 48458486  T
Q  147 accccctttcatccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatcttt 209  Q
    |||||||||||||||||||||||||||||||||    |||||||||||||||||| |||||||    
T  48458487 accccctttcatccacaaatcaccatagatgtg----caaccaatatctgaatcaacatcttt 48458545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 46 - 186
Target Start/End: Complemental strand, 51167306 - 51167166
Alignment:
Q  46 aagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccct 145  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  51167306 aagttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattatgaaccct 51167207  T
Q  146 taccccctttcatccacaaatcaccatagatgtgcaaccaa 186  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  51167206 taccccctttcatccacaaatcaccatagatgtgcaaccaa 51167166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 47 - 186
Target Start/End: Original strand, 22497241 - 22497380
Alignment:
Q  47 agttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccctt 146  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22497241 agttacacccaaatttatttaaatttttacaataataccaaaattgtcctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccctt 22497340  T
Q  147 accccctttcatccacaaatcaccatagatgtgcaaccaa 186  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  22497341 accccctttcatccacaaatcaccatagatgtgcaaccaa 22497380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 45 - 209
Target Start/End: Original strand, 30357250 - 30357410
Alignment:
Q  45 taagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccc 144  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  30357250 taagttacacctaaatttatttaaaattttacaataataccaaaattgtcctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccc 30357349  T
Q  145 ttaccccctttcatccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatcttt 209  Q
    |||||||||||||||||||||||||||||||| ||     ||||||||||||||||| |||||||    
T  30357350 ttaccccctttcatccacaaatcaccatagatatg----taaccaatatctgaatcaacatcttt 30357410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 46 - 209
Target Start/End: Complemental strand, 37126760 - 37126601
Alignment:
Q  46 aagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccct 145  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  37126760 aagttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccct 37126661  T
Q  146 taccccctttcatccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatcttt 209  Q
    |||||||||||||||||||||||||||||||    |  |||||||||||||||||| |||||||    
T  37126660 taccccctttcatccacaaatcaccatagat----atacaaccaatatctgaatcaacatcttt 37126601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 46 - 209
Target Start/End: Original strand, 38252519 - 38252678
Alignment:
Q  46 aagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccct 145  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  38252519 aagttacatctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccct 38252618  T
Q  146 taccccctttcatccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatcttt 209  Q
    ||||||||||||| ||||||||||| ||||||||    |||||||||||||||||| |||||||    
T  38252619 taccccctttcattcacaaatcaccgtagatgtg----caaccaatatctgaatcaacatcttt 38252678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 46 - 209
Target Start/End: Complemental strand, 43973360 - 43973201
Alignment:
Q  46 aagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccct 145  Q
    |||||| ||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  43973360 aagttatacccaaatttatttaaaattttacaataataccaaaattgtcctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccct 43973261  T
Q  146 taccccctttcatccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatcttt 209  Q
    |||||||||||||||||||||||||||||||||||||    ||||||||||||||| |||||||    
T  43973260 taccccctttcatccacaaatcaccatagatgtgcaa----ccaatatctgaatcaacatcttt 43973201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 46 - 186
Target Start/End: Original strand, 10659526 - 10659666
Alignment:
Q  46 aagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccct 145  Q
    |||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||    
T  10659526 aagttaaacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcgtttacgatcattctgaaccct 10659625  T
Q  146 taccccctttcatccacaaatcaccatagatgtgcaaccaa 186  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  10659626 taccccctttcatccacaaatcaccatagatgtgcaaccaa 10659666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 46 - 186
Target Start/End: Original strand, 13286930 - 13287070
Alignment:
Q  46 aagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccct 145  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| ||||||||    
T  13286930 aagttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgataattttgaaccct 13287029  T
Q  146 taccccctttcatccacaaatcaccatagatgtgcaaccaa 186  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  13287030 taccccctttcatccacaaatcaccatagatgtgcaaccaa 13287070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 46 - 186
Target Start/End: Complemental strand, 20607820 - 20607680
Alignment:
Q  46 aagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccct 145  Q
    |||||||||| ||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  20607820 aagttacacccaaatttatttaaaattttacaataatatcaaaattgtcctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccct 20607721  T
Q  146 taccccctttcatccacaaatcaccatagatgtgcaaccaa 186  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  20607720 taccccctttcatccacaaatcaccatagatgtgcaaccaa 20607680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 47 - 186
Target Start/End: Complemental strand, 17338607 - 17338468
Alignment:
Q  47 agttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccctt 146  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17338607 agttacacccaaatttatttaaatttttacaataataccaaaattgtcctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccctt 17338508  T
Q  147 accccctttcatccacaaatcaccatagatgtgcaaccaa 186  Q
    || |||||||||||||||||||||||||||||||||||||    
T  17338507 actccctttcatccacaaatcaccatagatgtgcaaccaa 17338468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 47 - 186
Target Start/End: Original strand, 43218757 - 43218896
Alignment:
Q  47 agttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccctt 146  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43218757 agttacacccaaatttatttaaatttttacaataataccaaaattgtcctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccctt 43218856  T
Q  147 accccctttcatccacaaatcaccatagatgtgcaaccaa 186  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  43218857 accccctttcatccacaaatcaccgtagatgtgcaaccaa 43218896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 46 - 209
Target Start/End: Complemental strand, 5273709 - 5273550
Alignment:
Q  46 aagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccct 145  Q
    |||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  5273709 aagttacacccaaatttatttaaaattttacaataataccgaaattgccctcttcatgtaaatttttaaaaactcatcttttatgatcattctgaaccct 5273610  T
Q  146 taccccctttcatccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatcttt 209  Q
    ||||||||||||||||||||||||| |||||||||||    ||||||||||||||| |||||||    
T  5273609 taccccctttcatccacaaatcaccgtagatgtgcaa----ccaatatctgaatcaacatcttt 5273550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 46 - 209
Target Start/End: Complemental strand, 10049244 - 10049085
Alignment:
Q  46 aagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccct 145  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| ||||||||    
T  10049244 aagttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaactcatcttttatgatcattatgaaccct 10049145  T
Q  146 taccccctttcatccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatcttt 209  Q
    ||||| |||||||||||||||||||||||||||||||    ||||||||||||||| |||||||    
T  10049144 taccctctttcatccacaaatcaccatagatgtgcaa----ccaatatctgaatcaacatcttt 10049085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 46 - 209
Target Start/End: Complemental strand, 10471483 - 10471324
Alignment:
Q  46 aagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccct 145  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| |    
T  10471483 aagttacacccaaatttatttaaaattttacaataataccaaaattgtcctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaacctt 10471384  T
Q  146 taccccctttcatccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatcttt 209  Q
    ||||||||||||||||||||||||||||||||||    |||| ||||||||||||| |||||||    
T  10471383 taccccctttcatccacaaatcaccatagatgtg----caactaatatctgaatcaacatcttt 10471324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 45 - 209
Target Start/End: Original strand, 2445960 - 2446120
Alignment:
Q  45 taagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccc 144  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| |||| |||||||||||||||||||||    
T  2445960 taagttacacctaaatttatttaaaattttacaataatatcaaaattgccctcttcatgtgaatttttaaaaacccatattttatgatcattctgaaccc 2446059  T
Q  145 ttaccccctttcatccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatcttt 209  Q
    ||||||| ||||||||||||||||| |||||||||    |||||||||||||||||| |||||||    
T  2446060 ttaccccatttcatccacaaatcacaatagatgtg----caaccaatatctgaatcaacatcttt 2446120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 45 - 209
Target Start/End: Complemental strand, 8828746 - 8828586
Alignment:
Q  45 taagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccc 144  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| |||||||||||||||||||||||| |    
T  8828746 taagttacatccaaatttatttaaaattttacaataataccaaaattgtcctcgtcatgtaaatttttaaaaacccatcttttatgatcattctgaactc 8828647  T
Q  145 ttaccccctttcatccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatcttt 209  Q
    ||||||||||||||||||||||||||||||||||||||    ||||||||||||||| |||||||    
T  8828646 ttaccccctttcatccacaaatcaccatagatgtgcaa----ccaatatctgaatcaacatcttt 8828586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 49 - 209
Target Start/End: Original strand, 23150742 - 23150898
Alignment:
Q  49 ttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaacccttac 148  Q
    ||||||| | ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||     
T  23150742 ttacacccatatttatttaaaattttataataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctaaacccttat 23150841  T
Q  149 cccctttcatccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatcttt 209  Q
    |||||||||||||||||||||||||||||||    |||||||||||||||||| |||||||    
T  23150842 cccctttcatccacaaatcaccatagatgtg----caaccaatatctgaatcaacatcttt 23150898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 45 - 209
Target Start/End: Original strand, 27449490 - 27449650
Alignment:
Q  45 taagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccc 144  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  27449490 taagttacatctaaatttatttaaaattttacaataataccaaaatttccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccc 27449589  T
Q  145 ttaccccctttcatccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatcttt 209  Q
    ||| |||||||||||||||||| ||||||||||||    |||| ||||||||||||| |||||||    
T  27449590 ttatcccctttcatccacaaattaccatagatgtg----caacaaatatctgaatcaacatcttt 27449650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 117; E-Value: 8e-60
Query Start/End: Original strand, 46 - 186
Target Start/End: Original strand, 31655045 - 31655185
Alignment:
Q  46 aagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccct 145  Q
    |||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  31655045 aagttacacccaaatttatttaaaatttaacaataataccaaaattgccctcttcatgtaaatttctaaaaacccatcttttatgatcattctgaaccct 31655144  T
Q  146 taccccctttcatccacaaatcaccatagatgtgcaaccaa 186  Q
    |||| | ||||||||||||||||||||||||||||||||||    
T  31655145 tacctcatttcatccacaaatcaccatagatgtgcaaccaa 31655185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 45 - 209
Target Start/End: Original strand, 9745943 - 9746102
Alignment:
Q  45 taagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccc 144  Q
    |||||||||||  |||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  9745943 taagttacacccgaatttatttaaa-ttttacaataatactaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccc 9746041  T
Q  145 ttaccccctttcatccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatcttt 209  Q
    ||||||||||| |||||||||||||||||||||||    |||||||||||||||||| |||||||    
T  9746042 ttacccccttttatccacaaatcaccatagatgtg----caaccaatatctgaatcaacatcttt 9746102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 46 - 209
Target Start/End: Complemental strand, 12227880 - 12227720
Alignment:
Q  46 aagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccct 145  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| ||||||||||||    
T  12227880 aagttacacttaaatttatttaaaattttacaataataccaaaattgccctcttcacgtaaatttttaaaaacccatcttttatgattattctgaaccct 12227781  T
Q  146 tac-cccctttcatccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatcttt 209  Q
    ||| |||||||||||||||||||| ||||||||||    |||||||||||||||||| |||||||    
T  12227780 tacccccctttcatccacaaatcatcatagatgtg----caaccaatatctgaatcaacatcttt 12227720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 57 - 209
Target Start/End: Complemental strand, 49804979 - 49804831
Alignment:
Q  57 aaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaacccttaccccctttc 156  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  49804979 aaatttatttaaaattttacaataatactaaaattgtcctcttcatgtaaatttttaaaaacccatcttttatgatcgttctgaacccttaccccctttc 49804880  T
Q  157 atccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatcttt 209  Q
    ||||||||||||||||||||||||||    ||||||||||||||| |||||||    
T  49804879 atccacaaatcaccatagatgtgcaa----ccaatatctgaatcaacatcttt 49804831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 47 - 169
Target Start/End: Complemental strand, 26718095 - 26717973
Alignment:
Q  47 agttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccctt 146  Q
    ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26718095 agttacacccaaatttatttaaaattttacaataatatcaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccctt 26717996  T
Q  147 accccctttcatccacaaatcac 169  Q
    |||||||||||||||||||||||    
T  26717995 accccctttcatccacaaatcac 26717973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 46 - 209
Target Start/End: Original strand, 37821062 - 37821220
Alignment:
Q  46 aagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccct 145  Q
    |||||||||| ||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||     
T  37821062 aagttacacccaaatttatttaaaattttataataataccaaaattgtcctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaacccg 37821161  T
Q  146 taccccctttcatccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatcttt 209  Q
    || || ||||||||||||||||||||||||||||    |||||||||||||||||| |||||||    
T  37821162 ta-cctctttcatccacaaatcaccatagatgtg----caaccaatatctgaatcaacatcttt 37821220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 46 - 209
Target Start/End: Complemental strand, 55274276 - 55274117
Alignment:
Q  46 aagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccct 145  Q
    |||||||| | ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||  ||||||||||||||||| ||||| ||    
T  55274276 aagttacatccaaatttatttaaaattttacaataatatcaaaattgccctcttcatgtaaatttttaaaaactcatcttttatgatcattatgaactct 55274177  T
Q  146 taccccctttcatccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatcttt 209  Q
    |||||||||||||||||||||||||||||||||||||    ||||||||||||||| |||||||    
T  55274176 taccccctttcatccacaaatcaccatagatgtgcaa----ccaatatctgaatcaacatcttt 55274117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 46 - 209
Target Start/End: Original strand, 46528090 - 46528257
Alignment:
Q  46 aagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccct 145  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  46528090 aagttacacctaaatttatttaaaattttacaataataccaaaattgtcctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccct 46528189  T
Q  146 taccc--------cctttcatccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatcttt 209  Q
    |||||        |||||||||||||||||||||||||||||    |||||||||||||||||| |||||||    
T  46528190 tacccccttacctcctttcatccacaaatcaccatagatgtg----caaccaatatctgaatcaacatcttt 46528257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 47 - 209
Target Start/End: Original strand, 53018982 - 53019140
Alignment:
Q  47 agttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccctt 146  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||| ||||||||||||||| |||||||| ||||||||||||||| ||||||||||||    
T  53018982 agttacacccaaatttatttaaaattttacaataatatcaaaattgtcctcttcatgtaaatgtttaaaaacccatcttttatgatcgttctgaaccctt 53019081  T
Q  147 accccctttcatccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatcttt 209  Q
    |||||||||||||||||||||| ||||||||||    |||||||||||||||||| |||||||    
T  53019082 accccctttcatccacaaatcatcatagatgtg----caaccaatatctgaatcaacatcttt 53019140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 46 - 186
Target Start/End: Original strand, 47697768 - 47697913
Alignment:
Q  46 aagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccct 145  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| ||||||||||    
T  47697768 aagttacacccaaatttatttaaaattttacaataataccaaaattgctctcttcatgtaaatttttaaaaacccatcttttatgatcaatctgaaccct 47697867  T
Q  146 tacc-----ccctttcatccacaaatcaccatagatgtgcaaccaa 186  Q
    ||||     |||||||||||||||||||||||||||||||||||||    
T  47697868 tacccccttccctttcatccacaaatcaccatagatgtgcaaccaa 47697913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 45 - 186
Target Start/End: Complemental strand, 998448 - 998307
Alignment:
Q  45 taagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccc 144  Q
    ||||||||| | |||||||||||||||||||||||||||| ||||||||| ||||||||||||||| |||||| |||| |||||||||||||||||||||    
T  998448 taagttacatccaaatttatttaaaattttacaataatactaaaattgccatcttcatgtaaatttctaaaaacccatgttttatgatcattctgaaccc 998349  T
Q  145 ttaccccctttcatccacaaatcaccatagatgtgcaaccaa 186  Q
    |||||||||||||| ||||||||||||||||||| |||||||    
T  998348 ttaccccctttcattcacaaatcaccatagatgtacaaccaa 998307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 46 - 186
Target Start/End: Complemental strand, 8068651 - 8068511
Alignment:
Q  46 aagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccct 145  Q
    |||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||| | ||||  ||| ||||||||| ||||||||||||    
T  8068651 aagttacacccaaatttatttaaaattttacaataataccaagattgccctcttcatgtaaatttcttaaaactcatattttatgattattctgaaccct 8068552  T
Q  146 taccccctttcatccacaaatcaccatagatgtgcaaccaa 186  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  8068551 taccccttttcatccacaaatcaccatagatgtgcaaccaa 8068511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 58 - 182
Target Start/End: Complemental strand, 41114221 - 41114097
Alignment:
Q  58 aatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaacccttaccccctttca 157  Q
    |||||||||||||||||||||||||| |||||||  |||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  41114221 aatttatttaaaattttacaataatatcaaaattatcctcttcatgtaaatttttaaaaatttatcttttatgatcattctgaacccttaccccctttca 41114122  T
Q  158 tccacaaatcaccatagatgtgcaa 182  Q
    |||||||||||||||||||||||||    
T  41114121 tccacaaatcaccatagatgtgcaa 41114097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 57 - 209
Target Start/End: Original strand, 24405782 - 24405938
Alignment:
Q  57 aaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaacccttaccc------ 150  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||          
T  24405782 aaatttatttaaaattttacaataataccaaaattgtcctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaacccttacccccttac 24405881  T
Q  151 --cctttcatccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatcttt 209  Q
      |||||||||||||||||||||||||||||    |||||||||||||||||| |||||||    
T  24405882 ctcctttcatccacaaatcaccatagatgtg----caaccaatatctgaatcaacatcttt 24405938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 45 - 186
Target Start/End: Complemental strand, 28555297 - 28555157
Alignment:
Q  45 taagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccc 144  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||| | ||||||||||||||| ||||||   ||||||||||||||||||||||||    
T  28555297 taagttacacccaaatttatttaaaattttacaataataccaaaattgtcttcttcatgtaaatttctaaaaacttatcttttatgatcattctgaaccc 28555198  T
Q  145 ttaccccctttcatccacaaatcaccatagatgtgcaaccaa 186  Q
    ||| || |||||||||||||||||||||||||||||||||||    
T  28555197 tta-cctctttcatccacaaatcaccatagatgtgcaaccaa 28555157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 47 - 186
Target Start/End: Original strand, 41454247 - 41454386
Alignment:
Q  47 agttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccctt 146  Q
    |||||||||||||||||||||||||||||||||||||||||||||| | | ||||||||||||  |||||| ||||||||||||||||||||||||| |     
T  41454247 agttacacctaaatttatttaaaattttacaataataccaaaattgtctttttcatgtaaattactaaaaacccatcttttatgatcattctgaaccttc 41454346  T
Q  147 accccctttcatccacaaatcaccatagatgtgcaaccaa 186  Q
    ||||||||||||||| ||||||||||| ||||||||||||    
T  41454347 accccctttcatccaaaaatcaccataaatgtgcaaccaa 41454386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 46 - 209
Target Start/End: Original strand, 3019202 - 3019360
Alignment:
Q  46 aagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccct 145  Q
    |||||||| |||||||||||||||||||||||||||||  ||||||| | ||||||||||||||||||||||  |||||||||| |||||||||||||||    
T  3019202 aagttacatctaaatttatttaaaattttacaataatattaaaattgtcatcttcatgtaaatttttaaaaactcatcttttataatcattctgaaccct 3019301  T
Q  146 taccccctttcatccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatcttt 209  Q
    ||  ||||||||||||||||||||||||||||||    |||||||||||||||||| |||||||    
T  3019302 ta-tccctttcatccacaaatcaccatagatgtg----caaccaatatctgaatcaacatcttt 3019360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 46 - 209
Target Start/End: Complemental strand, 26975595 - 26975445
Alignment:
Q  46 aagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccct 145  Q
    ||||||||||||||||||||||||||||||| |||||| ||||||||         ||||||||||||||||||||||||||||||||||||||||||||    
T  26975595 aagttacacctaaatttatttaaaattttactataatatcaaaattg---------tgtaaatttttaaaaatccatcttttatgatcattctgaaccct 26975505  T
Q  146 taccccctttcatccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatcttt 209  Q
    || ||||||||||||||||||||||||||||||||||    ||||||||||||||| |||||||    
T  26975504 tatcccctttcatccacaaatcaccatagatgtgcaa----ccaatatctgaatcaacatcttt 26975445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 46 - 208
Target Start/End: Original strand, 26229372 - 26229522
Alignment:
Q  46 aagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccct 145  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||| |||||||||||||        ||||||    
T  26229372 aagttacacccaaatttatttaaaattttacaataataccaaaattgtcctcttcatgtaaatgtttaaaaacccatcttttatga--------aaccct 26229463  T
Q  146 taccccctttcatccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatctt 208  Q
    ||||||||||||||||||||||||||||||||||    |||||||||||||||||| ||||||    
T  26229464 taccccctttcatccacaaatcaccatagatgtg----caaccaatatctgaatcaacatctt 26229522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 47 - 186
Target Start/End: Complemental strand, 35513188 - 35513049
Alignment:
Q  47 agttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccctt 146  Q
    ||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| || ||||| || ||||||||||||| |     
T  35513188 agttacatctaaatttatttaaaattttacaataatatcaaaattgccctcttcatgtagatttttaaaaacccttctttcattatcattctgaaccttc 35513089  T
Q  147 accccctttcatccacaaatcaccatagatgtgcaaccaa 186  Q
    ||||||||||||||| |||||| ||||||||||| |||||    
T  35513088 accccctttcatccaaaaatcatcatagatgtgctaccaa 35513049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 80 - 150
Target Start/End: Original strand, 33591124 - 33591194
Alignment:
Q  80 aataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaacccttaccc 150  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  33591124 aataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaacccttaccc 33591194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 47 - 144
Target Start/End: Original strand, 501740 - 501837
Alignment:
Q  47 agttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccc 144  Q
    ||||||| | ||||||||||||||||||||||||||| ||||||||  |||||||||||||||| ||||||  |||||||||||||||||||||||||    
T  501740 agttacatccaaatttatttaaaattttacaataatatcaaaattgttctcttcatgtaaatttctaaaaactcatcttttatgatcattctgaaccc 501837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 47 - 115
Target Start/End: Original strand, 5218974 - 5219042
Alignment:
Q  47 agttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaa 115  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||| || ||| ||||||| ||||    
T  5218974 agttacacccaaatttatttaaaattttacaataataccaaaattgccccctccatctaaatttctaaa 5219042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 47 - 117
Target Start/End: Complemental strand, 9126419 - 9126350
Alignment:
Q  47 agttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaa 117  Q
    ||||||||||||||||| ||||||||||||||||||||| |||||  ||||||||||||||||||| ||||    
T  9126419 agttacacctaaatttacttaaaattttacaataataccgaaatt-acctcttcatgtaaattttttaaaa 9126350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 47 - 117
Target Start/End: Complemental strand, 9134526 - 9134457
Alignment:
Q  47 agttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaa 117  Q
    ||||||||||||||||| ||||||||||||||||||||| |||||  ||||||||||||||||||| ||||    
T  9134526 agttacacctaaatttacttaaaattttacaataataccgaaatt-acctcttcatgtaaattttttaaaa 9134457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 85
Target Start/End: Complemental strand, 9116531 - 9116495
Alignment:
Q  49 ttacacctaaatttatttaaaattttacaataatacc 85  Q
    ||||||| ||||||| |||||||||||||||||||||    
T  9116531 ttacacccaaatttacttaaaattttacaataatacc 9116495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 93
Target Start/End: Complemental strand, 31608426 - 31608390
Alignment:
Q  57 aaatttatttaaaattttacaataataccaaaattgc 93  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  31608426 aaatttacttaaaattttataataataccaaaattgc 31608390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 136; Significance: 4e-71; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 45 - 209
Target Start/End: Complemental strand, 28226470 - 28226310
Alignment:
Q  45 taagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccc 144  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||    
T  28226470 taagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgattattctgaaccc 28226371  T
Q  145 ttaccccctttcatccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatcttt 209  Q
    ||||||||||||||||||||||||||||||||||||||    ||||||||||||||| |||||||    
T  28226370 ttaccccctttcatccacaaatcaccatagatgtgcaa----ccaatatctgaatcaacatcttt 28226310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 46 - 209
Target Start/End: Original strand, 50490802 - 50490961
Alignment:
Q  46 aagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccct 145  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  50490802 aagttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccct 50490901  T
Q  146 taccccctttcatccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatcttt 209  Q
    ||||||||||||||||||||||||||||||||||    |||||||||||||||||| |||||||    
T  50490902 taccccctttcatccacaaatcaccatagatgtg----caaccaatatctgaatcaacatcttt 50490961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 130; E-Value: 1e-67
Query Start/End: Original strand, 45 - 186
Target Start/End: Original strand, 3770503 - 3770644
Alignment:
Q  45 taagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccc 144  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||    
T  3770503 taagttacacctaaatttatttaaaattttacaataataccaaaattgccttcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccc 3770602  T
Q  145 ttaccccctttcatccacaaatcaccatagatgtgcaaccaa 186  Q
    ||||||||||||||||||||||||||||||||| ||||||||    
T  3770603 ttaccccctttcatccacaaatcaccatagatgcgcaaccaa 3770644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 130; E-Value: 1e-67
Query Start/End: Original strand, 47 - 209
Target Start/End: Original strand, 25828677 - 25828835
Alignment:
Q  47 agttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccctt 146  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  25828677 agttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaactcatcttttatgatcattctgaaccctt 25828776  T
Q  147 accccctttcatccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatcttt 209  Q
    |||||||||||||||||||||||||||||||||    |||||||||||||||||| |||||||    
T  25828777 accccctttcatccacaaatcaccatagatgtg----caaccaatatctgaatcaacatcttt 25828835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 46 - 186
Target Start/End: Complemental strand, 26770251 - 26770111
Alignment:
Q  46 aagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccct 145  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  26770251 aagttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttctaaaaacccatcttttatgatcattctgaaccct 26770152  T
Q  146 taccccctttcatccacaaatcaccatagatgtgcaaccaa 186  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  26770151 taccccctttcatccacaaatcaccatagatgtgcaaccaa 26770111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 46 - 209
Target Start/End: Complemental strand, 15476106 - 15475947
Alignment:
Q  46 aagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccct 145  Q
    |||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||    
T  15476106 aagttacacccaaatttatttaaaattttacaataatacaaaaattgccctcttcatgtaaatttttaaaaacccatcttttattatcattctgaaccct 15476007  T
Q  146 taccccctttcatccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatcttt 209  Q
    |||||||||||||||||||||||||||||||||||||    ||||||||||||||| |||||||    
T  15476006 taccccctttcatccacaaatcaccatagatgtgcaa----ccaatatctgaatcaacatcttt 15475947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 46 - 209
Target Start/End: Complemental strand, 28068955 - 28068796
Alignment:
Q  46 aagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccct 145  Q
    ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  28068955 aagttacacataaatttatttaaaattttacaataataccaaacttgccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccct 28068856  T
Q  146 taccccctttcatccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatcttt 209  Q
    |||||||||||||||| ||||||||||||||||||||    ||||||||||||||| |||||||    
T  28068855 taccccctttcatccataaatcaccatagatgtgcaa----ccaatatctgaatcaacatcttt 28068796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 47 - 209
Target Start/End: Original strand, 40359667 - 40359825
Alignment:
Q  47 agttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccctt 146  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  40359667 agttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcgttctgaaccctt 40359766  T
Q  147 accccctttcatccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatcttt 209  Q
    ||| |||||||||||||||||||||||||||||    |||||||||||||||||| |||||||    
T  40359767 acctcctttcatccacaaatcaccatagatgtg----caaccaatatctgaatcaacatcttt 40359825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 47 - 209
Target Start/End: Original strand, 46674745 - 46674903
Alignment:
Q  47 agttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccctt 146  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  46674745 agttacacctaaatttatttaaaattttacaataataccaaaattgtcctcttcatgtaaatttttaaaatcccatcttttatgatcattctgaaccctt 46674844  T
Q  147 accccctttcatccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatcttt 209  Q
    |||||||||||||||||||||||||||||||||     ||||||||||||||||| |||||||    
T  46674845 accccctttcatccacaaatcaccatagatgtg----taaccaatatctgaatcaacatcttt 46674903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 46 - 183
Target Start/End: Complemental strand, 48542678 - 48542541
Alignment:
Q  46 aagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccct 145  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  48542678 aagttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacacatcttttatgatcattctgaaccct 48542579  T
Q  146 taccccctttcatccacaaatcaccatagatgtgcaac 183  Q
    ||||||||||||||||||||||||||||||||||||||    
T  48542578 taccccctttcatccacaaatcaccatagatgtgcaac 48542541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 45 - 209
Target Start/End: Complemental strand, 37094279 - 37094119
Alignment:
Q  45 taagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccc 144  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| || ||||||| |||||||||||||||    
T  37094279 taagttacacccaaatttatttaaaattttacaataataccaaaattgtcctcttcatgtaaatttttaaaaacccctcttttacgatcattctgaaccc 37094180  T
Q  145 ttaccccctttcatccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatcttt 209  Q
    ||||||||||||||||||||||||||||||||||||||    ||||||||||||||| |||||||    
T  37094179 ttaccccctttcatccacaaatcaccatagatgtgcaa----ccaatatctgaatcaacatcttt 37094119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 46 - 209
Target Start/End: Original strand, 42885267 - 42885426
Alignment:
Q  46 aagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccct 145  Q
    |||||||||| |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  42885267 aagttacacccaaatttatttaaaattttacaataatacaaaaattgtcctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccct 42885366  T
Q  146 taccccctttcatccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatcttt 209  Q
    ||||||||||||| ||||||||||||||||||||    |||||||||||||||||| |||||||    
T  42885367 taccccctttcatacacaaatcaccatagatgtg----caaccaatatctgaatcaacatcttt 42885426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 121; E-Value: 3e-62
Query Start/End: Original strand, 46 - 186
Target Start/End: Complemental strand, 44054943 - 44054803
Alignment:
Q  46 aagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccct 145  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| ||||||||    
T  44054943 aagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttctaaaaacccatcttttatgatcattttgaaccct 44054844  T
Q  146 taccccctttcatccacaaatcaccatagatgtgcaaccaa 186  Q
    |||||| |||||||||||||||||||||||||| |||||||    
T  44054843 taccccttttcatccacaaatcaccatagatgtacaaccaa 44054803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 47 - 186
Target Start/End: Original strand, 13556077 - 13556216
Alignment:
Q  47 agttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccctt 146  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  13556077 agttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtcaatttttaaaaacccatcttttatgatcattctgaaccctt 13556176  T
Q  147 accccctttcatccacaaatcaccatagatgtgcaaccaa 186  Q
    |||||||||| ||||||||||||||||| |||||||||||    
T  13556177 accccctttcgtccacaaatcaccatagttgtgcaaccaa 13556216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 57 - 209
Target Start/End: Original strand, 15907250 - 15907398
Alignment:
Q  57 aaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaacccttaccccctttc 156  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  15907250 aaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattttgaacccttaccccctttc 15907349  T
Q  157 atccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatcttt 209  Q
    |||||||||||||||||||||||    ||| |||||||||||||| |||||||    
T  15907350 atccacaaatcaccatagatgtg----caatcaatatctgaatcaacatcttt 15907398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 119; E-Value: 5e-61
Query Start/End: Original strand, 48 - 186
Target Start/End: Original strand, 18604860 - 18604998
Alignment:
Q  48 gttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccctta 147  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||| ||||||||||||||||||||||||||| |    
T  18604860 gttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaattactaaaaacccatcttttatgatcattctgaaccctca 18604959  T
Q  148 ccccctttcatccacaaatcaccatagatgtgcaaccaa 186  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  18604960 ccccatttcatccacaaatcaccatagatgtgcaaccaa 18604998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 119; E-Value: 5e-61
Query Start/End: Original strand, 46 - 209
Target Start/End: Complemental strand, 45502478 - 45502320
Alignment:
Q  46 aagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccct 145  Q
    |||||||||| ||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  45502478 aagttacacccaaatttaattaaa-ttttataataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccct 45502380  T
Q  146 taccccctttcatccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatcttt 209  Q
    |||||||||||||||||||||||||||||||||||||    ||||||||||||||| |||||||    
T  45502379 taccccctttcatccacaaatcaccatagatgtgcaa----ccaatatctgaatcaacatcttt 45502320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 47 - 209
Target Start/End: Original strand, 47534001 - 47534159
Alignment:
Q  47 agttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccctt 146  Q
    ||||||||  ||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  47534001 agttacactcaaatttatttaaaattttacaataatatcaaaattgtcctcttcatgtaaatttttaaaaacccatcttttatgatcgttctgaaccctt 47534100  T
Q  147 accccctttcatccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatcttt 209  Q
    |||||||||||||||||||||||||||||||||    |||||||||||||||||| |||||||    
T  47534101 accccctttcatccacaaatcaccatagatgtg----caaccaatatctgaatcaacatcttt 47534159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 46 - 186
Target Start/End: Complemental strand, 44234154 - 44234012
Alignment:
Q  46 aagttacacctaaatttatttaaaattttacaataata--ccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaacc 143  Q
    |||||||||| |||||||||||||||||||||||||||  ||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||    
T  44234154 aagttacacccaaatttatttaaaattttacaataatataccaaaattgccctcttcatgtaaatttctaaaaacccatcttttatgatcattctgaacc 44234055  T
Q  144 cttaccccctttcatccacaaatcaccatagatgtgcaaccaa 186  Q
    |||||||||||||||| ||||||||||||||||||||||||||    
T  44234054 cttaccccctttcatcaacaaatcaccatagatgtgcaaccaa 44234012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 57 - 186
Target Start/End: Original strand, 30361166 - 30361295
Alignment:
Q  57 aaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaacccttaccccctttc 156  Q
    ||||||||||||||||||||||||||| ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||    
T  30361166 aaatttatttaaaattttacaataatatcaaaattgctctcttcatgtaaatttctaaaaatccatcttttatgatcattctgaacccttaccccccttc 30361265  T
Q  157 atccacaaatcaccatagatgtgcaaccaa 186  Q
    ||||||||||||||||||||||||||||||    
T  30361266 atccacaaatcaccatagatgtgcaaccaa 30361295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 46 - 186
Target Start/End: Original strand, 35719710 - 35719851
Alignment:
Q  46 aagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaa-tccatcttttatgatcattctgaaccc 144  Q
    |||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  35719710 aagttacacccaaatttatttaaaattttataataataccaaaattgccctcttcatgtaaatttttaaaaaccccatcttttatgatcattctgaaccc 35719809  T
Q  145 ttaccccctttcatccacaaatcaccatagatgtgcaaccaa 186  Q
    |||| || ||||||||||||||||||||||||||||||||||    
T  35719810 ttacaccatttcatccacaaatcaccatagatgtgcaaccaa 35719851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 46 - 186
Target Start/End: Original strand, 6978902 - 6979042
Alignment:
Q  46 aagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccct 145  Q
    |||||||||| ||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||  ||||||||||||||||||||||| ||    
T  6978902 aagttacacccaaatttatttaaaattttacaataatatcaaaattgccttcttcatgtaaatttttaaaaactcatcttttatgatcattctgaactct 6979001  T
Q  146 taccccctttcatccacaaatcaccatagatgtgcaaccaa 186  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  6979002 taccccctttcatccacaaatcaacatagatgtgcaaccaa 6979042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 46 - 186
Target Start/End: Original strand, 30159013 - 30159153
Alignment:
Q  46 aagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccct 145  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| | ||||||||||||||||||||||  ||||||||||||||||||||||| ||    
T  30159013 aagttacacctaaatttatttaaaattttacaataatatcaaaattgtcatcttcatgtaaatttttaaaaactcatcttttatgatcattctgaactct 30159112  T
Q  146 taccccctttcatccacaaatcaccatagatgtgcaaccaa 186  Q
    || ||||||||||||||||||||||||||||||||||||||    
T  30159113 tatcccctttcatccacaaatcaccatagatgtgcaaccaa 30159153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 46 - 186
Target Start/End: Complemental strand, 52469559 - 52469419
Alignment:
Q  46 aagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccct 145  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||  ||||||||||||||||| |||||| |    
T  52469559 aagttacacccaaatttatttaaaattttacaataataccaaaattgtcctcttcatgtaaatttttaaaaactcatcttttatgatcattatgaaccat 52469460  T
Q  146 taccccctttcatccacaaatcaccatagatgtgcaaccaa 186  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  52469459 taccccctttcttccacaaatcaccatagatgtgcaaccaa 52469419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 45 - 209
Target Start/End: Original strand, 8895621 - 8895780
Alignment:
Q  45 taagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccc 144  Q
    ||||||||||| |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||| |    
T  8895621 taagttacacccaaatttatttaaaattttacaataatactaaaattgtcctcttcatgtaaatttttaaaaacccatcttttatgatcattatgaactc 8895720  T
Q  145 ttaccccctttcatccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatcttt 209  Q
    |||||||||||||||||||||||| ||||||||||    |||||||||||||||||| |||||||    
T  8895721 ttaccccctttcatccacaaatca-catagatgtg----caaccaatatctgaatcaacatcttt 8895780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 46 - 209
Target Start/End: Complemental strand, 46234458 - 46234299
Alignment:
Q  46 aagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccct 145  Q
    ||||||||  ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  46234458 aagttacatttaaatttatttaaaattttacaataatactaaaattgtcctcttcatgtaaatttttaaaaactcatcttttatgatcattctgaaccct 46234359  T
Q  146 taccccctttcatccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatcttt 209  Q
    ||||||||||||| |||||||||||||||||||     |||||||||||||||||| |||||||    
T  46234358 taccccctttcattcacaaatcaccatagatgt----acaaccaatatctgaatcaacatcttt 46234299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 46 - 186
Target Start/End: Complemental strand, 24180687 - 24180546
Alignment:
Q  46 aagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatcc-atcttttatgatcattctgaaccc 144  Q
    |||||||||| ||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| || ||||||||||||||||||||||||    
T  24180687 aagttacacccaaatttatttaaaattttataataataccaaaattgcccttttcatgtaaatttttaaaaaccccatcttttatgatcattctgaaccc 24180588  T
Q  145 ttaccccctttcatccacaaatcaccatagatgtgcaaccaa 186  Q
    |||| || ||||||||||||||||||||||||||||||||||    
T  24180587 ttacaccatttcatccacaaatcaccatagatgtgcaaccaa 24180546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 46 - 186
Target Start/End: Complemental strand, 31760828 - 31760688
Alignment:
Q  46 aagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccct 145  Q
    |||||||||  |||||||||||||||||||||||||||  ||||||| ||||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  31760828 aagttacactcaaatttatttaaaattttacaataatataaaaattgtcctcttcatgtaaatttctaaaaacccatcttttatgatcattctgaaccct 31760729  T
Q  146 taccccctttcatccacaaatcaccatagatgtgcaaccaa 186  Q
    ||||||||||||||||||||||||||||||||| |||||||    
T  31760728 taccccctttcatccacaaatcaccatagatgtacaaccaa 31760688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 45 - 209
Target Start/End: Original strand, 49456837 - 49456997
Alignment:
Q  45 taagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccc 144  Q
    |||||||||  ||||||||||||||||||||||||||||| ||||||  ||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  49456837 taagttacatttaaatttatttaaaattttacaataatactaaaattatcctcttcatgtaaatttttaaaaattcatcttttatgatcattctgaaccc 49456936  T
Q  145 ttaccccctttcatccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatcttt 209  Q
    |||||  |||||||||||||||||| |||||||||    |||||||||||||||||| |||||||    
T  49456937 ttaccatctttcatccacaaatcactatagatgtg----caaccaatatctgaatcaacatcttt 49456997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 46 - 209
Target Start/End: Original strand, 3046762 - 3046921
Alignment:
Q  46 aagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccct 145  Q
    |||||||| |||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  3046762 aagttacatctaaatttatttaaaattttacaataatattaaaattgccctcttcatgtaaatttttaaaaactcatcttttatgatcattctgaaccct 3046861  T
Q  146 taccccctttcatccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatcttt 209  Q
    ||   |||||||||||||||| ||||||||||||    |||||||||||||||||| |||||||    
T  3046862 tatatcctttcatccacaaattaccatagatgtg----caaccaatatctgaatcaacatcttt 3046921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 46 - 209
Target Start/End: Complemental strand, 3994995 - 3994837
Alignment:
Q  46 aagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccct 145  Q
    |||||||||| |||||||||||||||||||||||||||||||| ||| | |||||||| ||||||||||||| |||||||||||||||||||||||| ||    
T  3994995 aagttacacccaaatttatttaaaattttacaataataccaaa-ttgtcatcttcatgaaaatttttaaaaacccatcttttatgatcattctgaacact 3994897  T
Q  146 taccccctttcatccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatcttt 209  Q
    |||||||||||||||||||||||||||||||||     |||||||||||||||||| |||||||    
T  3994896 taccccctttcatccacaaatcaccatagatgt----acaaccaatatctgaatcaacatcttt 3994837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 45 - 186
Target Start/End: Complemental strand, 4490268 - 4490127
Alignment:
Q  45 taagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccc 144  Q
    ||||||||||| ||||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||  |||||||||||||||||||||||||    
T  4490268 taagttacacccaaatttatttaaaattttacaataatatcaaaattgtcctcttcatgtaaatttctaaaaactcatcttttatgatcattctgaaccc 4490169  T
Q  145 ttaccccctttcatccacaaatcaccatagatgtgcaaccaa 186  Q
    |||| | |||||||||| ||||||||||||||||||||||||    
T  4490168 ttactctctttcatccataaatcaccatagatgtgcaaccaa 4490127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 57 - 169
Target Start/End: Original strand, 3416316 - 3416428
Alignment:
Q  57 aaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaacccttaccccctttc 156  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  3416316 aaatttatttaaaattttacaataataccaaaatcgccctcttcatgtaaatttttaaaaacccatcttttatgatcattatgaacccttaccccctttc 3416415  T
Q  157 atccacaaatcac 169  Q
    |||||||||||||    
T  3416416 atccacaaatcac 3416428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 46 - 186
Target Start/End: Complemental strand, 17581009 - 17580869
Alignment:
Q  46 aagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccct 145  Q
    |||||||| | ||||||||||||||||||||||||||||||||||||  |||||||||||| ||| |||||| | |||||||||||||||||||||| ||    
T  17581009 aagttacatccaaatttatttaaaattttacaataataccaaaattgttctcttcatgtaattttctaaaaacctatcttttatgatcattctgaactct 17580910  T
Q  146 taccccctttcatccacaaatcaccatagatgtgcaaccaa 186  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  17580909 taccccctttcatccacaaatcaccatagatatgcaaccaa 17580869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 46 - 173
Target Start/End: Complemental strand, 20599721 - 20599594
Alignment:
Q  46 aagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccct 145  Q
    |||||||||| |||||||||||||||||||||||||||| |||||||  |||||||||||||||||||||||   || ||||||||||||||||||||||    
T  20599721 aagttacacccaaatttatttaaaattttacaataatactaaaattgttctcttcatgtaaatttttaaaaacttatattttatgatcattctgaaccct 20599622  T
Q  146 taccccctttcatccacaaatcaccata 173  Q
    ||||||||||||| ||||||||||||||    
T  20599621 taccccctttcatacacaaatcaccata 20599594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 47 - 209
Target Start/End: Complemental strand, 25730045 - 25729897
Alignment:
Q  47 agttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccctt 146  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||         |||| ||||    
T  25730045 agttacacccaaatttatttaaaattttacaataataccaaaattgtcctcttcatgtaaatttttaaaaacccatctttta---------tgaaacctt 25729955  T
Q  147 accccctttcatccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatcttt 209  Q
    | |||||||||||||||||||||||||||||||    |||||||||||||||||| |||||||    
T  25729954 a-cccctttcatccacaaatcaccatagatgtg----caaccaatatctgaatcaacatcttt 25729897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 47 - 186
Target Start/End: Complemental strand, 17926315 - 17926177
Alignment:
Q  47 agttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccctt 146  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| | | ||| ||||||||| |||||| |||||||||||||||||||||||   ||    
T  17926315 agttacacccaaatttatttaaaattttacaataataccaaaattgtcatgttcgtgtaaatttctaaaaacccatcttttatgatcattctgaa-tttt 17926217  T
Q  147 accccctttcatccacaaatcaccatagatgtgcaaccaa 186  Q
      ||| ||||||| ||||||||||||||||||||||||||    
T  17926216 ttcccttttcatctacaaatcaccatagatgtgcaaccaa 17926177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 57 - 209
Target Start/End: Complemental strand, 43106652 - 43106497
Alignment:
Q  57 aaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaa-------aatccatcttttatgatcattctgaacccttacc 149  Q
    ||||||||||||||||||||||||||| ||||| || ||||||||||||||||||||||       || | |||||||||||||||||||||||||||||    
T  43106652 aaatttatttaaaattttacaataatatcaaaagtgtcctcttcatgtaaatttttaaattttaaaaacctatcttttatgatcattctgaacccttacc 43106553  T
Q  150 ccctttcatccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatcttt 209  Q
    |||||||||| | ||||||||||||||    |  |||||||||||||||||| |||||||    
T  43106552 ccctttcatcaaaaaatcaccatagat----atacaaccaatatctgaatcaacatcttt 43106497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 47 - 186
Target Start/End: Original strand, 49740086 - 49740225
Alignment:
Q  47 agttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccctt 146  Q
    |||||||  |||||||||||||||||||||||||||| |||||||| | | ||||||||||||| |||||| ||||||| ||| |||||||||||   |     
T  49740086 agttacatttaaatttatttaaaattttacaataatatcaaaattgtcatgttcatgtaaatttctaaaaacccatcttatataatcattctgaattttc 49740185  T
Q  147 accccctttcatccacaaatcaccatagatgtgcaaccaa 186  Q
    ||| ||||||||||||||||||| ||||||||||||||||    
T  49740186 acctcctttcatccacaaatcactatagatgtgcaaccaa 49740225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 57 - 182
Target Start/End: Original strand, 8969476 - 8969601
Alignment:
Q  57 aaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaacccttaccccctttc 156  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||||||||| ||||||||| ||||| || ||||||||||||||| ||||| ||||    
T  8969476 aaatttatttaaaattttacaataatactaaaatttccctcttcatgtaaatttctaaaaatccttctttcattatcattctgaaccctcaccccttttc 8969575  T
Q  157 atccacaaatcaccatagatgtgcaa 182  Q
       |||||| |||||||||| |||||    
T  8969576 tcgcacaaaccaccatagatatgcaa 8969601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 47 - 182
Target Start/End: Complemental strand, 7042982 - 7042846
Alignment:
Q  47 agttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccctt 146  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| |  ||||| || |||||| ||||||||     
T  7042982 agttacacctaaatttatttaaaatcttacaataataccaaaattgccctcttcatgtaaatttctaaaaaccattctttcattatcattttgaaccctc 7042883  T
Q  147 acccc-ctttcatccacaaatcaccatagatgtgcaa 182  Q
    |||||  ||||| ||||||| |||||| ||| |||||    
T  7042882 acccctttttcacccacaaaccaccatggatatgcaa 7042846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 97 - 186
Target Start/End: Complemental strand, 29033740 - 29033651
Alignment:
Q  97 cttcatgtaaatttttaaaaatccatcttttatgatcattctgaacccttaccccctttcatccacaaatcaccatagatgtgcaaccaa 186  Q
    |||||||||||||||||||||   || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  29033740 cttcatgtaaatttttaaaaacttattttttatgatcattctgaacccttaccccctttcatccataaatcaccatagatgtgcaaccaa 29033651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 46 - 126
Target Start/End: Complemental strand, 11335714 - 11335634
Alignment:
Q  46 aagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttt 126  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||    
T  11335714 aagttacacccaaatttatttaaaattttacaataataccaaaattgtcctcttcatgtaaatttttaaaaacccatcttt 11335634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 46 - 126
Target Start/End: Complemental strand, 11493734 - 11493654
Alignment:
Q  46 aagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttt 126  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||    
T  11493734 aagttacacccaaatttatttaaaattttacaataataccaaaattgtcctcttcatgtaaatttttaaaaacccatcttt 11493654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 47 - 178
Target Start/End: Original strand, 17136897 - 17137028
Alignment:
Q  47 agttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccctt 146  Q
    |||||||  |||||||||||||||||||| ||||||||| |||||| | | | ||| |||| || |||||| ||   ||| ||||| ||| |||||| ||    
T  17136897 agttacatttaaatttatttaaaattttataataataccgaaattgtcgtatccatataaaattctaaaaacccccttttcatgataattttgaaccttt 17136996  T
Q  147 accccctttcatccacaaatcaccatagatgt 178  Q
       |||||||||||||||||||||||||||||    
T  17136997 gatccctttcatccacaaatcaccatagatgt 17137028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 47 - 116
Target Start/End: Complemental strand, 12320321 - 12320252
Alignment:
Q  47 agttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaa 116  Q
    |||||||| |||||||| ||||||||||||||||||| |||||||| | |||  ||||||||||||||||    
T  12320321 agttacacttaaatttacttaaaattttacaataatatcaaaattgtcttctcaatgtaaatttttaaaa 12320252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 152 - 209
Target Start/End: Complemental strand, 11335637 - 11335584
Alignment:
Q  152 ctttcatccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatcttt 209  Q
    |||||||||||||||||||||||||||||||    ||||||||||||||| |||||||    
T  11335637 ctttcatccacaaatcaccatagatgtgcaa----ccaatatctgaatcaacatcttt 11335584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 152 - 209
Target Start/End: Complemental strand, 11493657 - 11493604
Alignment:
Q  152 ctttcatccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatcttt 209  Q
    |||||||||||||||||||||||||||||||    ||||||||||||||| |||||||    
T  11493657 ctttcatccacaaatcaccatagatgtgcaa----ccaatatctgaatcaacatcttt 11493604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 48 - 96
Target Start/End: Complemental strand, 45926300 - 45926252
Alignment:
Q  48 gttacacctaaatttatttaaaattttacaataataccaaaattgccct 96  Q
    |||||||||||||||| |||||| |||||||||||||||||||| ||||    
T  45926300 gttacacctaaatttacttaaaagtttacaataataccaaaattaccct 45926252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 135; Significance: 2e-70; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 46 - 209
Target Start/End: Complemental strand, 9741357 - 9741198
Alignment:
Q  46 aagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccct 145  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  9741357 aagttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccct 9741258  T
Q  146 taccccctttcatccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatcttt 209  Q
    |||||||||||||||||||||||||||||||||||||    ||||||||||||||| |||||||    
T  9741257 taccccctttcatccacaaatcaccatagatgtgcaa----ccaatatctgaatcaacatcttt 9741198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 133; E-Value: 2e-69
Query Start/End: Original strand, 46 - 186
Target Start/End: Complemental strand, 18676887 - 18676747
Alignment:
Q  46 aagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccct 145  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18676887 aagttacacccaaatttatttaaaattttacaataataccaaaattgccatcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccct 18676788  T
Q  146 taccccctttcatccacaaatcaccatagatgtgcaaccaa 186  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  18676787 taccccctttcatccacaaatcaccatagatgtgcaaccaa 18676747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 46 - 209
Target Start/End: Original strand, 12848441 - 12848600
Alignment:
Q  46 aagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccct 145  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||| |||||||||||||||||||||||||||    
T  12848441 aagttacacctaaatttatttaaaattttacaataataccaaaattaccctcttcatataaatttttaaaaacccatcttttatgatcattctgaaccct 12848540  T
Q  146 taccccctttcatccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatcttt 209  Q
    ||||||||||||||||||||||||||||||||||    |||||||||||||||||| |||||||    
T  12848541 taccccctttcatccacaaatcaccatagatgtg----caaccaatatctgaatcaacatcttt 12848600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 46 - 209
Target Start/End: Complemental strand, 31588049 - 31587890
Alignment:
Q  46 aagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccct 145  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  31588049 aagttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccct 31587950  T
Q  146 taccccctttcatccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatcttt 209  Q
    |||||||||||||||||||||||||||| ||||||||    ||||||||||||||| |||||||    
T  31587949 taccccctttcatccacaaatcaccatatatgtgcaa----ccaatatctgaatcaacatcttt 31587890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 46 - 209
Target Start/End: Complemental strand, 41118908 - 41118749
Alignment:
Q  46 aagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccct 145  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  41118908 aagttacacctaaatttatttaaaatttaacaataataccaaaattgccttcttcatgtaaatttttaaaaatccatcttttatgataattctgaaccct 41118809  T
Q  146 taccccctttcatccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatcttt 209  Q
    |||||||||||||||||||||||||||||||||||||    ||||||||||||||| |||||||    
T  41118808 taccccctttcatccacaaatcaccatagatgtgcaa----ccaatatctgaatcaacatcttt 41118749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 46 - 209
Target Start/End: Original strand, 47455051 - 47455210
Alignment:
Q  46 aagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccct 145  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  47455051 aagttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccct 47455150  T
Q  146 taccccctttcatccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatcttt 209  Q
    ||||||||||||||||||||||| ||||||||||    |||||||||||||||||| |||||||    
T  47455151 taccccctttcatccacaaatcatcatagatgtg----caaccaatatctgaatcaacatcttt 47455210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 47 - 186
Target Start/End: Complemental strand, 40431405 - 40431266
Alignment:
Q  47 agttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccctt 146  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40431405 agttacacccaaatttatttaaatttttacaataataccaaaattgtcctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccctt 40431306  T
Q  147 accccctttcatccacaaatcaccatagatgtgcaaccaa 186  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  40431305 accccctttcatccacaaatcaccatagatgtgcaaccaa 40431266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 46 - 209
Target Start/End: Original strand, 3887671 - 3887830
Alignment:
Q  46 aagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccct 145  Q
    |||||||||  ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  3887671 aagttacactcaaatttatttaaaattttacaataatatcaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccct 3887770  T
Q  146 taccccctttcatccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatcttt 209  Q
    ||||||||||||||||||||||||||||||||||    |||||||||||||||||| |||||||    
T  3887771 taccccctttcatccacaaatcaccatagatgtg----caaccaatatctgaatcaacatcttt 3887830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 46 - 209
Target Start/End: Complemental strand, 5544435 - 5544276
Alignment:
Q  46 aagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccct 145  Q
    |||||||||| |||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  5544435 aagttacacccaaatttatttaaaattttacaataatattaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccct 5544336  T
Q  146 taccccctttcatccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatcttt 209  Q
    |||||||||||||||||||||||||||||||||||||    ||||||||||||||| |||||||    
T  5544335 taccccctttcatccacaaatcaccatagatgtgcaa----ccaatatctgaatcaacatcttt 5544276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 46 - 209
Target Start/End: Complemental strand, 12726349 - 12726190
Alignment:
Q  46 aagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccct 145  Q
    ||||||||||  |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  12726349 aagttacacccgaatttatttaaaattttacaataataccaaaattaccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccct 12726250  T
Q  146 taccccctttcatccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatcttt 209  Q
    |||||||||||||||||||||||||||||||||||||    ||||||||||||||| |||||||    
T  12726249 taccccctttcatccacaaatcaccatagatgtgcaa----ccaatatctgaatcaacatcttt 12726190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 46 - 186
Target Start/End: Original strand, 44508504 - 44508645
Alignment:
Q  46 aagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaattttt-aaaaatccatcttttatgatcattctgaaccc 144  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  44508504 aagttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaattttttaaaaacccatcttttatgatcattctgaaccc 44508603  T
Q  145 ttaccccctttcatccacaaatcaccatagatgtgcaaccaa 186  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  44508604 ttaccccctttcatccacaaatcaccatagatgtgcaaccaa 44508645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 57 - 209
Target Start/End: Original strand, 31621948 - 31622096
Alignment:
Q  57 aaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaacccttaccccctttc 156  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||    
T  31621948 aaatttatttaaaattttacaataataccaaaattgtcctcttcatgtaaatttttaaaaattcatcttttatgatcattctgaacccttactccctttc 31622047  T
Q  157 atccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatcttt 209  Q
    |||||||||||||||||||||||    |||||||||||||||||| |||||||    
T  31622048 atccacaaatcaccatagatgtg----caaccaatatctgaatcaacatcttt 31622096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 47 - 186
Target Start/End: Original strand, 42076336 - 42076475
Alignment:
Q  47 agttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccctt 146  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  42076336 agttacacccaaatttatttaaatttttacaataataccaaaattgtcctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccgtt 42076435  T
Q  147 accccctttcatccacaaatcaccatagatgtgcaaccaa 186  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  42076436 accccatttcatccacaaatcaccatagatgtgcaaccaa 42076475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 46 - 209
Target Start/End: Original strand, 44291053 - 44291212
Alignment:
Q  46 aagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccct 145  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| | |||||||||||||||||||||| |||||||||||||||||| ||||| ||    
T  44291053 aagttacacctaaatttatttaaaattttacaataatatcaaaattgtcatcttcatgtaaatttttaaaaacccatcttttatgatcattatgaactct 44291152  T
Q  146 taccccctttcatccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatcttt 209  Q
    |||||||||||||| |||||||||||||||||||    |||||||||||||||||| |||||||    
T  44291153 taccccctttcatctacaaatcaccatagatgtg----caaccaatatctgaatcaacatcttt 44291212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 46 - 187
Target Start/End: Complemental strand, 40186837 - 40186696
Alignment:
Q  46 aagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccct 145  Q
    |||||||| | ||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||||||||| ||    
T  40186837 aagttacatccaaatttatttaaaattttataataataccaaaagtgccctcttcatgtaaatttttaaaaactcatcttttatgatcattctgaactct 40186738  T
Q  146 taccccctttcatccacaaatcaccatagatgtgcaaccaac 187  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  40186737 taccccctttcatccacaaatcaccatagatgtgcaaccaac 40186696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 57 - 186
Target Start/End: Original strand, 44061820 - 44061949
Alignment:
Q  57 aaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaacccttaccccctttc 156  Q
    ||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  44061820 aaatttatttaaaattttacaataatatcaaaattgctctcttcatgtaaatttttaaaaactcatcttttatgatcattctgaacccttaccccctttc 44061919  T
Q  157 atccacaaatcaccatagatgtgcaaccaa 186  Q
    ||||||||||||||||||||||||||||||    
T  44061920 atccacaaatcaccatagatgtgcaaccaa 44061949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 45 - 186
Target Start/End: Complemental strand, 47020601 - 47020460
Alignment:
Q  45 taagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccc 144  Q
    ||||||||||| ||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  47020601 taagttacacccaaatttatttaaaattttacaataatatcaaaattgtcctcttcatgtaaatttttaaaaactcatcttttatgatcattctgaaccc 47020502  T
Q  145 ttaccccctttcatccacaaatcaccatagatgtgcaaccaa 186  Q
    ||||||||||||||||||||| || |||||||||||||||||    
T  47020501 ttaccccctttcatccacaaaccatcatagatgtgcaaccaa 47020460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 47 - 169
Target Start/End: Original strand, 42697408 - 42697530
Alignment:
Q  47 agttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccctt 146  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  42697408 agttacacccaaatttatttaaaattttacaataataccaaaattgtcctctttatgtaaatttttaaaaattcatcttttatgatcattctgaaccctt 42697507  T
Q  147 accccctttcatccacaaatcac 169  Q
    |||||||||||||||||||||||    
T  42697508 accccctttcatccacaaatcac 42697530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 46 - 168
Target Start/End: Complemental strand, 30888523 - 30888401
Alignment:
Q  46 aagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccct 145  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||| ||||||||||||||||||||||    
T  30888523 aagttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttctaaaaacccatattttatgatcattctgaaccct 30888424  T
Q  146 taccccctttcatccacaaatca 168  Q
    |||||||||||||||||||||||    
T  30888423 taccccctttcatccacaaatca 30888401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 46 - 209
Target Start/End: Complemental strand, 38743354 - 38743201
Alignment:
Q  46 aagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccct 145  Q
    |||||||||  ||||||||||||||||||||||||||| ||||||||||||||      ||| |||||||||||||||||||||||||||||||||||||    
T  38743354 aagttacactcaaatttatttaaaattttacaataatatcaaaattgccctct------aaaattttaaaaatccatcttttatgatcattctgaaccct 38743261  T
Q  146 taccccctttcatccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatcttt 209  Q
    |||| ||||||||||||||||||||||||||||||||    ||||||||||||||| |||||||    
T  38743260 tacctcctttcatccacaaatcaccatagatgtgcaa----ccaatatctgaatcaacatcttt 38743201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 47 - 186
Target Start/End: Complemental strand, 3112205 - 3112066
Alignment:
Q  47 agttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccctt 146  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| || ||||||||||||||  |||||| | |||||||||||||||| |||||| |     
T  3112205 agttacacccaaatttatttaaaattttacaataataccaaaattaccatcttcatgtaaattactaaaaacctatcttttatgatcattatgaaccttc 3112106  T
Q  147 accccctttcatccacaaatcaccatagatgtgcaaccaa 186  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  3112105 accccctttcatccacaaattaccatagatgtgcaaccaa 3112066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 45 - 209
Target Start/End: Complemental strand, 9870534 - 9870374
Alignment:
Q  45 taagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccc 144  Q
    ||||||||| | ||||| ||| |||| |||||||||||| |||||||| ||||||||||||||||| |||||| ||||||||||| |||||||||||| |    
T  9870534 taagttacatccaaattaattaaaaagtttacaataataacaaaattgtcctcttcatgtaaatttctaaaaacccatcttttattatcattctgaacac 9870435  T
Q  145 ttaccccctttcatccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatcttt 209  Q
    ||| |||||||||||||||||||||||||||||||    || ||||||||||||||| |||||||    
T  9870434 ttatcccctttcatccacaaatcaccatagatgtg----catccaatatctgaatcaacatcttt 9870374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 113 - 209
Target Start/End: Original strand, 25105043 - 25105135
Alignment:
Q  113 aaaaatccatcttttatgatcattctgaacccttaccccctttcatccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatcttt 209  Q
    ||||| |||||||||||||| |||||||||| ||| |||||||||||||||||||||||||||||||     || |||||||||||||| |||||||    
T  25105043 aaaaacccatcttttatgattattctgaacctttatcccctttcatccacaaatcaccatagatgtg----aaatcaatatctgaatcaacatcttt 25105135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 56 - 126
Target Start/End: Complemental strand, 40190189 - 40190120
Alignment:
Q  56 taaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttt 126  Q
    |||||||||||||||||| ||||||||| |||||||||||||||||| ||||||| |||||| ||||||||    
T  40190189 taaatttatttaaaattt-acaataatatcaaaattgccctcttcatataaatttctaaaaacccatcttt 40190120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 47 - 87
Target Start/End: Original strand, 39494886 - 39494926
Alignment:
Q  47 agttacacctaaatttatttaaaattttacaataataccaa 87  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  39494886 agttacacctaaatttatttaaaattttacaataataccaa 39494926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 49 - 143
Target Start/End: Complemental strand, 27419161 - 27419067
Alignment:
Q  49 ttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaacc 143  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||| |||| || ||| | || |||||| |  | ||| || |||||||||||||    
T  27419161 ttacacctaaatttacttaaaattttataataataccaaaattgctctctccacgtagaattctaaaaacctctttttcataatcattctgaacc 27419067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 186
Target Start/End: Complemental strand, 38168177 - 38168048
Alignment:
Q  47 agttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccctt 146  Q
    ||||||| | ||| ||| |||||||||||||| ||||||||||||| |||         ||||| |||||| || | |||| |||||||| ||||||||     
T  38168177 agttacatccaaaattacttaaaattttacaaaaataccaaaattgtcct---------aatttctaaaaaccccttttttgtgatcattttgaaccctc 38168087  T
Q  147 accccctttcatccacaaatcaccatagatgtgcaaccaa 186  Q
    ||| | |||||||| ||||||||||||| |||||||||||    
T  38168086 acctc-tttcatccgcaaatcaccataggtgtgcaaccaa 38168048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 48 - 102
Target Start/End: Original strand, 34012058 - 34012115
Alignment:
Q  48 gttacacctaaatttatttaaaatttta---caataataccaaaattgccctcttcat 102  Q
    ||||||||||||||||||||||||||||   |||||||||||| ||| |||| |||||    
T  34012058 gttacacctaaatttatttaaaattttacttcaataataccaagatttcccttttcat 34012115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 107
Target Start/End: Complemental strand, 10242474 - 10242424
Alignment:
Q  57 aaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaa 107  Q
    ||||||| ||||||||| |||||||||||||||||  | ||||||||||||    
T  10242474 aaatttacttaaaatttgacaataataccaaaattatcatcttcatgtaaa 10242424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 96
Target Start/End: Original strand, 21278297 - 21278345
Alignment:
Q  48 gttacacctaaatttatttaaaattttacaataataccaaaattgccct 96  Q
    |||||||||||||||  ||||||||||   |||||||||||||||||||    
T  21278297 gttacacctaaattttcttaaaatttttttataataccaaaattgccct 21278345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 112
Target Start/End: Original strand, 25065987 - 25066050
Alignment:
Q  48 gttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaattttt 112  Q
    |||||| ||||||||| || |||||| ||||||||||||||||| | || ||||| |||||||||    
T  25065987 gttacatctaaatttacttgaaatttcacaataataccaaaattactct-ttcatataaattttt 25066050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 135; Significance: 2e-70; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 46 - 209
Target Start/End: Original strand, 4169665 - 4169824
Alignment:
Q  46 aagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccct 145  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  4169665 aagttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccct 4169764  T
Q  146 taccccctttcatccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatcttt 209  Q
    ||||||||||||||||||||||||||||||||||    |||||||||||||||||| |||||||    
T  4169765 taccccctttcatccacaaatcaccatagatgtg----caaccaatatctgaatcaacatcttt 4169824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 46 - 209
Target Start/End: Original strand, 4210394 - 4210553
Alignment:
Q  46 aagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccct 145  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  4210394 aagttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccct 4210493  T
Q  146 taccccctttcatccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatcttt 209  Q
    ||||||||||||||||||||||||||||||||||    |||||||||||||||||| |||||||    
T  4210494 taccccctttcatccacaaatcaccatagatgtg----caaccaatatctgaatcaacatcttt 4210553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 133; E-Value: 2e-69
Query Start/End: Original strand, 46 - 186
Target Start/End: Complemental strand, 17595995 - 17595855
Alignment:
Q  46 aagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccct 145  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  17595995 aagttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccct 17595896  T
Q  146 taccccctttcatccacaaatcaccatagatgtgcaaccaa 186  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  17595895 taccccctttcatccacaaatcaccatagatgtgcaaccaa 17595855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 46 - 209
Target Start/End: Original strand, 33489793 - 33489952
Alignment:
Q  46 aagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccct 145  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  33489793 aagttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaactcatcttttatgatcattctgaaccct 33489892  T
Q  146 taccccctttcatccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatcttt 209  Q
    ||||||||||||||||||||||||||||||||||    |||||||||||||||||| |||||||    
T  33489893 taccccctttcatccacaaatcaccatagatgtg----caaccaatatctgaatcaacatcttt 33489952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 46 - 186
Target Start/End: Original strand, 10790492 - 10790632
Alignment:
Q  46 aagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccct 145  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  10790492 aagttacaccaaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaattcatcttttatgatcattctgaaccct 10790591  T
Q  146 taccccctttcatccacaaatcaccatagatgtgcaaccaa 186  Q
    ||| |||||||||||||||||||||||||||||||||||||    
T  10790592 tacaccctttcatccacaaatcaccatagatgtgcaaccaa 10790632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 47 - 209
Target Start/End: Original strand, 5545373 - 5545532
Alignment:
Q  47 agttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccctt 146  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  5545373 agttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccctt 5545472  T
Q  147 accccctttcatccacaaa-tcaccatagatgtgcaaccaaccaatatctgaatcagcatcttt 209  Q
    ||||||||||||||||||| ||||||||||||||    |||||||||||||||||| |||||||    
T  5545473 accccctttcatccacaaattcaccatagatgtg----caaccaatatctgaatcaacatcttt 5545532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 48 - 209
Target Start/End: Complemental strand, 742980 - 742823
Alignment:
Q  48 gttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccctta 147  Q
    |||||||  ||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  742980 gttacactcaaatttatttaaaattttacaataataccaaaattgctctcttcgtgtaaatttttaaaaatccatcttttatgatcattctgaaccctta 742881  T
Q  148 ccccctttcatccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatcttt 209  Q
    |||||||||||||||||||||||||||||||||||    ||||||||||||||| |||||||    
T  742880 ccccctttcatccacaaatcaccatagatgtgcaa----ccaatatctgaatcaacatcttt 742823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 47 - 209
Target Start/End: Complemental strand, 8933935 - 8933777
Alignment:
Q  47 agttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccctt 146  Q
    ||||||||| |||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  8933935 agttacacccaaatttatttaaaattttactataataccaaaattgtcctcttcatgtaaatttttaaaaacccatcttttatgatcgttctgaaccctt 8933836  T
Q  147 accccctttcatccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatcttt 209  Q
    ||||||||||||||||||||||||||||||||||||    ||||||||||||||| |||||||    
T  8933835 accccctttcatccacaaatcaccatagatgtgcaa----ccaatatctgaatcaacatcttt 8933777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 49 - 186
Target Start/End: Complemental strand, 33131261 - 33131124
Alignment:
Q  49 ttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaacccttac 148  Q
    ||||||| ||||||||||||| |||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33131261 ttacacccaaatttatttaaatttttacaataatactaaaattgtcctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaacccttac 33131162  T
Q  149 cccctttcatccacaaatcaccatagatgtgcaaccaa 186  Q
    ||||||||||||||||||||||||||||||||||||||    
T  33131161 cccctttcatccacaaatcaccatagatgtgcaaccaa 33131124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 45 - 186
Target Start/End: Original strand, 34475143 - 34475284
Alignment:
Q  45 taagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccc 144  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  34475143 taagttacatctaaatttatttacaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaactcatcttttatgatcattctgaaccc 34475242  T
Q  145 ttaccccctttcatccacaaatcaccatagatgtgcaaccaa 186  Q
    |||||||||||||||||||||| |||||||||||||||||||    
T  34475243 ttaccccctttcatccacaaatgaccatagatgtgcaaccaa 34475284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 47 - 186
Target Start/End: Complemental strand, 32938531 - 32938392
Alignment:
Q  47 agttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccctt 146  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||    
T  32938531 agttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttctaaaaacccatcttttatgatcattctgaaccctt 32938432  T
Q  147 accccctttcatccacaaatcaccatagatgtgcaaccaa 186  Q
    | ||||||||||| ||||||||||||||||||||||||||    
T  32938431 atcccctttcatcgacaaatcaccatagatgtgcaaccaa 32938392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 46 - 209
Target Start/End: Original strand, 8658988 - 8659150
Alignment:
Q  46 aagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatctt---ttatgatcattctgaac 142  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||   ||||||||||| |||||    
T  8658988 aagttacacccaaatttatttaaaattttacaataataccaaaattgtcctcttcatgtaaatttttaaaaacccatctttaattatgatcattttgaac 8659087  T
Q  143 ccttaccccctttcatccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatcttt 209  Q
    |||||||||||||||||||||||||||||||||||||    |||||||||||||||||| |||||||    
T  8659088 ccttaccccctttcatccacaaatcaccatagatgtg----caaccaatatctgaatcaacatcttt 8659150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 46 - 209
Target Start/End: Complemental strand, 18676834 - 18676675
Alignment:
Q  46 aagttacacctaaatttatttaaaatttt-acaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccc 144  Q
    ||||||||||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  18676834 aagttacacctaaatttatttaaaatttttataataataccaaaattgtcctcttcatgtaaatttttaaaaattcatcttttatgatcattctgaaccc 18676735  T
Q  145 ttaccccctttcatccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatcttt 209  Q
    ||| |||||||||||||||||||||||||||||||    |||||||||||||||||| |||||||    
T  18676734 tta-cccctttcatccacaaatcaccatagatgtg----caaccaatatctgaatcaacatcttt 18676675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 45 - 186
Target Start/End: Original strand, 8062789 - 8062930
Alignment:
Q  45 taagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccc 144  Q
    ||||||||||| ||||||||||||||||||| |||||||||||||||| ||||||||||||| ||| |||||| ||||||||||||||||||||||||||    
T  8062789 taagttacacccaaatttatttaaaattttataataataccaaaattgtcctcttcatgtaattttctaaaaacccatcttttatgatcattctgaaccc 8062888  T
Q  145 ttaccccctttcatccacaaatcaccatagatgtgcaaccaa 186  Q
    ||||||| ||||||||||||||||||||||||||||||||||    
T  8062889 ttaccccttttcatccacaaatcaccatagatgtgcaaccaa 8062930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 46 - 209
Target Start/End: Complemental strand, 28914256 - 28914101
Alignment:
Q  46 aagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccct 145  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| | ||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  28914256 aagttacacctaaatttatttaaaattttacaataatatcaaaattactctcttcatgtaaatttttaaaaaccaatcttttatgatcattctgaaccct 28914157  T
Q  146 taccccctttcatccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatcttt 209  Q
    ||||||||||||||||||||||||    ||||||    |||||||||||||||||| |||||||    
T  28914156 taccccctttcatccacaaatcac----gatgtg----caaccaatatctgaatcaacatcttt 28914101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 47 - 186
Target Start/End: Complemental strand, 12713216 - 12713077
Alignment:
Q  47 agttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccctt 146  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||  |||||||||||||||||||||||||||     
T  12713216 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttctaaaaccccatcttttatgatcattctgaaccctc 12713117  T
Q  147 accccctttcatccacaaatcaccatagatgtgcaaccaa 186  Q
     |||| |||||||||||| |||||||||||||||||||||    
T  12713116 gccccttttcatccacaactcaccatagatgtgcaaccaa 12713077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 46 - 183
Target Start/End: Original strand, 29516666 - 29516803
Alignment:
Q  46 aagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccct 145  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| || || ||    
T  29516666 aagttacatctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttctaaaaattcatcttttatgatcattttggactct 29516765  T
Q  146 taccccctttcatccacaaatcaccatagatgtgcaac 183  Q
    |||| ||||||||| ||||||||||||||||| |||||    
T  29516766 tacctcctttcatctacaaatcaccatagatgcgcaac 29516803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 47 - 186
Target Start/End: Original strand, 11590248 - 11590387
Alignment:
Q  47 agttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccctt 146  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| | |||||||||||||||| ||||||||| ||||| || ||||||||||||| |     
T  11590248 agttacacccaaatttatttaaaattttacaataataccaaaattacactcttcatgtaaatttctaaaaatccttctttcattatcattctgaaccatc 11590347  T
Q  147 accccctttcatccacaaatcaccatagatgtgcaaccaa 186  Q
     |||| |||| |||| ||||||||||||||||||||||||    
T  11590348 gccccatttcgtccataaatcaccatagatgtgcaaccaa 11590387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 57 - 186
Target Start/End: Original strand, 9224609 - 9224738
Alignment:
Q  57 aaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaacccttaccccctttc 156  Q
    |||||||||||||||||||||| |||| |||||||| ||||||||||||||||||| |||| || ||||| || |||||| |||||||| ||||||||||    
T  9224609 aaatttatttaaaattttacaacaatatcaaaattgtcctcttcatgtaaattttttaaaacccttctttcattatcattttgaaccctcaccccctttc 9224708  T
Q  157 atccacaaatcaccatagatgtgcaaccaa 186  Q
    ||| | |||||||||||||||||| |||||    
T  9224709 atctagaaatcaccatagatgtgctaccaa 9224738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 47 - 180
Target Start/End: Original strand, 9576031 - 9576164
Alignment:
Q  47 agttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccctt 146  Q
    ||||||||  |||||||||||||||||||||||||||| |||||||| ||| |||||||||||| |||||| || ||||| || |||||||||||||||     
T  9576031 agttacacacaaatttatttaaaattttacaataatactaaaattgctctcatcatgtaaatttctaaaaacccttctttcattatcattctgaaccctc 9576130  T
Q  147 accccctttcatccacaaatcaccatagatgtgc 180  Q
    |||||  ||||||||||||||| |||||| ||||    
T  9576131 accccacttcatccacaaatcatcatagacgtgc 9576164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 47 - 182
Target Start/End: Original strand, 2559732 - 2559866
Alignment:
Q  47 agttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccctt 146  Q
    ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| ||||| ||||||| | ||||| || |||||| ||||||||     
T  2559732 agttacaccaaaatttatttaaaattttataataataccaaaattgccctcttcatgtcaatttctaaaaat-cttctttcattatcattttgaaccctc 2559830  T
Q  147 accccctttcatccacaaatcaccatagatgtgcaa 182  Q
    ||||| ||||| ||||||| |||||| ||| |||||    
T  2559831 accccttttcacccacaaaccaccatggatatgcaa 2559866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 108 - 209
Target Start/End: Complemental strand, 29863997 - 29863900
Alignment:
Q  108 tttttaaaaatccatcttttatgatcattctgaacccttaccccctttcatccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatct 207  Q
    |||||||||| |||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    ||||||||||||||| |||||    
T  29863997 tttttaaaaacccattttttacgatcattctgaacccttaccccctttcatccacaaatcaccatagatgtgcaa----ccaatatctgaatcaacatct 29863902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 58 - 186
Target Start/End: Complemental strand, 8313876 - 8313748
Alignment:
Q  58 aatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaacccttaccccctttca 157  Q
    ||||||| |||||||||||||||||| || ||||| ||||||||||||||||| |||||| |  | ||| || ||||||| ||||||| |||||||||||    
T  8313876 aatttatataaaattttacaataatatcataattgtcctcttcatgtaaatttgtaaaaacctttatttcattatcattccgaaccctcaccccctttca 8313777  T
Q  158 tccacaaatcaccatagatgtgcaaccaa 186  Q
    || | ||||||||||| ||||| ||||||    
T  8313776 tcaataaatcaccatatatgtgtaaccaa 8313748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 47 - 142
Target Start/End: Complemental strand, 20554914 - 20554819
Alignment:
Q  47 agttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaac 142  Q
    ||||||| |||||||||||||||| | ||||||||||| |||||| |||||||||||||||||| ||||||  | ||||| || ||||||||||||    
T  20554914 agttacatctaaatttatttaaaactgtacaataatactaaaattaccctcttcatgtaaatttctaaaaactcttctttcattatcattctgaac 20554819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 47 - 186
Target Start/End: Complemental strand, 25144205 - 25144075
Alignment:
Q  47 agttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccctt 146  Q
    ||||||||  ||||||| |||||||||||||||||||||||||||||          | ||||| |||||| || | |||||| |||||| |||   ||     
T  25144205 agttacactcaaatttacttaaaattttacaataataccaaaattgc---------attaatttctaaaaaccccttttttattatcattatgagttctc 25144115  T
Q  147 accccctttcatccacaaatcaccatagatgtgcaaccaa 186  Q
    ||||||||||||||||| | ||||||||||||||||||||    
T  25144114 accccctttcatccacagaccaccatagatgtgcaaccaa 25144075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 50 - 92
Target Start/End: Complemental strand, 13889191 - 13889149
Alignment:
Q  50 tacacctaaatttatttaaaattttacaataataccaaaattg 92  Q
    |||||||||||||| ||||||||||||||||||||||||||||    
T  13889191 tacacctaaatttacttaaaattttacaataataccaaaattg 13889149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 135; Significance: 2e-70; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 46 - 209
Target Start/End: Complemental strand, 3390958 - 3390799
Alignment:
Q  46 aagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccct 145  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  3390958 aagttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccct 3390859  T
Q  146 taccccctttcatccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatcttt 209  Q
    |||||||||||||||||||||||||||||||||||||    ||||||||||||||| |||||||    
T  3390858 taccccctttcatccacaaatcaccatagatgtgcaa----ccaatatctgaatcaacatcttt 3390799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 46 - 209
Target Start/End: Complemental strand, 33591821 - 33591662
Alignment:
Q  46 aagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccct 145  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||    
T  33591821 aagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaatcct 33591722  T
Q  146 taccccctttcatccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatcttt 209  Q
    |||||||||||||||||||||||||||||||||||||    ||||||||||||||| |||||||    
T  33591721 taccccctttcatccacaaatcaccatagatgtgcaa----ccaatatctgaatcaacatcttt 33591662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 46 - 209
Target Start/End: Complemental strand, 42675785 - 42675626
Alignment:
Q  46 aagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccct 145  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  42675785 aagttacacctaaatttatttaaaattttacaataatatcaaaattgccctcttcatgtaaatttttaaaaattcatcttttatgatcattctgaaccct 42675686  T
Q  146 taccccctttcatccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatcttt 209  Q
    |||||||||||||||||||||||||||||||||||||    ||||||||||||||| |||||||    
T  42675685 taccccctttcatccacaaatcaccatagatgtgcaa----ccaatatctgaatcaacatcttt 42675626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 45 - 209
Target Start/End: Complemental strand, 10692038 - 10691878
Alignment:
Q  45 taagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccc 144  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  10692038 taagttacacctaaatttatttaaaattttacaataatatcaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccc 10691939  T
Q  145 ttaccccctttcatccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatcttt 209  Q
    ||||||  ||||||||||||||||||||||||||||||    ||||||||||||||| |||||||    
T  10691938 ttacccgatttcatccacaaatcaccatagatgtgcaa----ccaatatctgaatcaacatcttt 10691878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 47 - 186
Target Start/End: Complemental strand, 36484726 - 36484587
Alignment:
Q  47 agttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccctt 146  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  36484726 agttacacctaaatttatttaaatttttacaataataccaaaattgtccttttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccctt 36484627  T
Q  147 accccctttcatccacaaatcaccatagatgtgcaaccaa 186  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  36484626 accccctttcatccacaaatcaccatagatgtgcaaccaa 36484587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 45 - 209
Target Start/End: Complemental strand, 8836658 - 8836499
Alignment:
Q  45 taagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccc 144  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  8836658 taagttacacctaaatttatttaaaattttacaataatatcaaaattgtcctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccc 8836559  T
Q  145 ttaccccctttcatccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatcttt 209  Q
    |||||||| ||||||||||||||||||||||||||    |||||||||||||||||| |||||||    
T  8836558 ttaccccc-ttcatccacaaatcaccatagatgtg----caaccaatatctgaatcaacatcttt 8836499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 45 - 209
Target Start/End: Original strand, 18185761 - 18185920
Alignment:
Q  45 taagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccc 144  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| |    
T  18185761 taagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattttgaactc 18185860  T
Q  145 ttaccccctttcatccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatcttt 209  Q
    ||| |||||||||||||||||||||||||||||||    |||||||||||||||||| |||||||    
T  18185861 tta-cccctttcatccacaaatcaccatagatgtg----caaccaatatctgaatcaacatcttt 18185920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 45 - 209
Target Start/End: Complemental strand, 35066171 - 35066012
Alignment:
Q  45 taagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccc 144  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  35066171 taagttacacccaaatttatttaaaattttacaataataccaaaattgctctcttcatgtaaatttttaaaaacccat-ttttatgatcattctgaaccc 35066073  T
Q  145 ttaccccctttcatccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatcttt 209  Q
    |||||||||||||||||||||||||||||||||||    |||||||||||||||||| |||||||    
T  35066072 ttaccccctttcatccacaaatcaccatagatgtg----caaccaatatctgaatcaacatcttt 35066012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 47 - 209
Target Start/End: Original strand, 42221727 - 42221885
Alignment:
Q  47 agttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccctt 146  Q
    ||||||||  ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  42221727 agttacactcaaatttatttaaaattttacaataataccaaaattgcactcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccctt 42221826  T
Q  147 accccctttcatccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatcttt 209  Q
    |||||||||||||||||||||||||||| ||||    |||||||||||||||||| |||||||    
T  42221827 accccctttcatccacaaatcaccataggtgtg----caaccaatatctgaatcaacatcttt 42221885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 119; E-Value: 5e-61
Query Start/End: Original strand, 46 - 209
Target Start/End: Complemental strand, 41743487 - 41743328
Alignment:
Q  46 aagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccct 145  Q
    |||||||| | |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  41743487 aagttacatccaaatttatttaaaattttacaataataccaaaattgtcctcttcatgtaaatttttaaaaattcatcttttatgatcattttgaaccct 41743388  T
Q  146 taccccctttcatccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatcttt 209  Q
    || ||||||||||||||||||||||||||||||||||    ||||||||||||||| |||||||    
T  41743387 tatcccctttcatccacaaatcaccatagatgtgcaa----ccaatatctgaatcaacatcttt 41743328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 117; E-Value: 8e-60
Query Start/End: Original strand, 46 - 207
Target Start/End: Original strand, 8335319 - 8335476
Alignment:
Q  46 aagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccct 145  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  8335319 aagttacacttaaatttatttaaaattttacaataatatcaaaattgctctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccct 8335418  T
Q  146 taccccctttcatccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatct 207  Q
    | ||| ||||||||||||||||||||||||||||||||    |||||||||||||| |||||    
T  8335419 ttccctctttcatccacaaatcaccatagatgtgcaac----caatatctgaatcaacatct 8335476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 45 - 209
Target Start/End: Original strand, 25031423 - 25031583
Alignment:
Q  45 taagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccc 144  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| ||    
T  25031423 taagttacacccaaatttatttaaaattttacaataatatcaaaattgcactcttcatgtaaatttttaaaaacccatcttttatgatcattctgaatcc 25031522  T
Q  145 ttaccccctttcatccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatcttt 209  Q
    |||||||||||||||||||||||||| ||||| ||    |||||||||||||||||| |||||||    
T  25031523 ttaccccctttcatccacaaatcaccgtagatatg----caaccaatatctgaatcaacatcttt 25031583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 46 - 209
Target Start/End: Original strand, 6230224 - 6230383
Alignment:
Q  46 aagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccct 145  Q
    ||||||||| ||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||  ||| ||||||||||||||||||||||    
T  6230224 aagttacacttaaatttatttaaaattttacaataatattaaaattgccctcttcatgtaaatttttaaaaactcatattttatgatcattctgaaccct 6230323  T
Q  146 taccccctttcatccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatcttt 209  Q
    || |||||||||||||||||||||||||||||||    |||||||||||||||||| |||||||    
T  6230324 tatcccctttcatccacaaatcaccatagatgtg----caaccaatatctgaatcaacatcttt 6230383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 46 - 182
Target Start/End: Complemental strand, 23192010 - 23191874
Alignment:
Q  46 aagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccct 145  Q
    |||||||||| |||||| |||||||||||| |||||||| ||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  23192010 aagttacacccaaatttgtttaaaattttataataatactaaaattgccctcttcatgtaaatttctaaaaacccatcttttatgatcattctgaaccct 23191911  T
Q  146 taccccctttcatccacaaatcaccatagatgtgcaa 182  Q
    |||||||||||||||||||||||||||||||||||||    
T  23191910 taccccctttcatccacaaatcaccatagatgtgcaa 23191874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 47 - 209
Target Start/End: Original strand, 29296188 - 29296347
Alignment:
Q  47 agttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccctt 146  Q
    ||||||| ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||| |||    
T  29296188 agttacatctaaatttatttaaaattttacaataatatcaaaattgtcctcttcatgtaaatttttaaaaactcatcttttatgatcattctgaactctt 29296287  T
Q  147 accccctttcatccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatcttt 209  Q
    |||| ||||||||||||||||||||||||||||||||||   | ||||||||||| |||||||    
T  29296288 accctctttcatccacaaatcaccatagatgtgcaacca---attatctgaatcaacatcttt 29296347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 46 - 186
Target Start/End: Original strand, 28349034 - 28349174
Alignment:
Q  46 aagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccct 145  Q
    |||||||||||||||||||||||||||| |||||||||||||||||| | ||||||||||||||| |||||| |||||||||||||| ||||||||||||    
T  28349034 aagttacacctaaatttatttaaaatttaacaataataccaaaattgtcatcttcatgtaaatttctaaaaacccatcttttatgatgattctgaaccct 28349133  T
Q  146 taccccctttcatccacaaatcaccatagatgtgcaaccaa 186  Q
    |||| | ||||||||||||||||||||||||||||||||||    
T  28349134 tacctcatttcatccacaaatcaccatagatgtgcaaccaa 28349174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 46 - 186
Target Start/End: Complemental strand, 15472793 - 15472648
Alignment:
Q  46 aagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccct 145  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||| |||||||||||||||| ||||||||||    
T  15472793 aagttacacccaaatttatttaaaattttacaataataccaaaattgtcttcttcatgtaaatttttaaaaacccatcttttatgatcaatctgaaccct 15472694  T
Q  146 taccc-----cctttcatccacaaatcaccatagatgtgcaaccaa 186  Q
    |||||     ||||||||||||||||||||||||||||||||||||    
T  15472693 tacccccttccctttcatccacaaatcaccatagatgtgcaaccaa 15472648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 16 - 186
Target Start/End: Complemental strand, 27771416 - 27771246
Alignment:
Q  16 agaccggtgctagtcacaccctnnnnnnntaagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaa 115  Q
    |||||||||||||||||||||         |||||||| | ||||||||||||||||| |||||||||||||||||| | ||||||||||||||| ||||    
T  27771416 agaccggtgctagtcacacccaaaaaaaacaagttacatccaaatttatttaaaatttaacaataataccaaaattgtcatcttcatgtaaatttctaaa 27771317  T
Q  116 aatccatcttttatgatcattctgaacccttaccccctttcatccacaaatcaccatagatgtgcaaccaa 186  Q
    || |||||||||||||||||||||||| |||||| | ||||||||||||||||||||||||||||||||||    
T  27771316 aacccatcttttatgatcattctgaactcttacctcatttcatccacaaatcaccatagatgtgcaaccaa 27771246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 57 - 169
Target Start/End: Original strand, 1420980 - 1421092
Alignment:
Q  57 aaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaacccttaccccctttc 156  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  1420980 aaatttatttaaaattttacaataataccaaaattgcccttttcatgtaaaattttaaaaacccatcttttatgatcattctgaacccttaccccctttc 1421079  T
Q  157 atccacaaatcac 169  Q
    |||||||||||||    
T  1421080 atccacaaatcac 1421092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 47 - 186
Target Start/End: Complemental strand, 8782809 - 8782670
Alignment:
Q  47 agttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccctt 146  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||| | | ||||||||||||| |||||| |||||||| ||||||||||||||  ||     
T  8782809 agttacacccaaatttatttaaaattttacaataatactaaaattgtcttgttcatgtaaatttctaaaaacccatctttcatgatcattctgaattctc 8782710  T
Q  147 accccctttcatccacaaatcaccatagatgtgcaaccaa 186  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  8782709 accccctttcatccacaaattaccatagatgtgcaaccaa 8782670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 47 - 166
Target Start/End: Complemental strand, 33570195 - 33570076
Alignment:
Q  47 agttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccctt 146  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| | | ||||||||||||| |||||| ||| |||||||||||||||||||  ||     
T  33570195 agttacacccaaatttatttaaaattttacaataataccaaaattgtcatgttcatgtaaatttctaaaaacccaccttttatgatcattctgaattctc 33570096  T
Q  147 accccctttcatccacaaat 166  Q
    ||||||||| ||||||||||    
T  33570095 acccccttttatccacaaat 33570076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 47 - 145
Target Start/End: Complemental strand, 8936012 - 8935914
Alignment:
Q  47 agttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccct 145  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| |  ||||| || |||||||||||||||    
T  8936012 agttacacccaaatttatttaaaattttacaataataccaaaattgtcctcttcatgtaaatttctaaaaaccattctttcattatcattctgaaccct 8935914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 47 - 186
Target Start/End: Complemental strand, 25472415 - 25472276
Alignment:
Q  47 agttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccctt 146  Q
    ||||||||| ||||||||||||||||||| ||||||||  |||   |||||||||| |||| || |||||| |||| ||| |||||||||||||||  |     
T  25472415 agttacacccaaatttatttaaaattttataataatactgaaaccaccctcttcatttaaaattctaaaaacccatttttcatgatcattctgaactttc 25472316  T
Q  147 accccctttcatccacaaatcaccatagatgtgcaaccaa 186  Q
    | ||||||||| | ||||| || |||| ||||| ||||||    
T  25472315 atcccctttcacctacaaaccatcataaatgtgaaaccaa 25472276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 135; Significance: 2e-70; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 46 - 209
Target Start/End: Complemental strand, 39677792 - 39677633
Alignment:
Q  46 aagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccct 145  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  39677792 aagttacacctaaatttatttaaaattttacaataataccaaaattaccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccct 39677693  T
Q  146 taccccctttcatccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatcttt 209  Q
    |||||||||||||||||||||||||||||||||||||    ||||||||||||||| |||||||    
T  39677692 taccccctttcatccacaaatcaccatagatgtgcaa----ccaatatctgaatcaacatcttt 39677633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 46 - 209
Target Start/End: Original strand, 22169110 - 22169269
Alignment:
Q  46 aagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccct 145  Q
    ||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22169110 aagttacacccgaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccct 22169209  T
Q  146 taccccctttcatccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatcttt 209  Q
    || |||||||||||||||||||||||||||||||    |||||||||||||||||| |||||||    
T  22169210 tatcccctttcatccacaaatcaccatagatgtg----caaccaatatctgaatcaacatcttt 22169269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 130; E-Value: 1e-67
Query Start/End: Original strand, 47 - 209
Target Start/End: Complemental strand, 11005738 - 11005580
Alignment:
Q  47 agttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccctt 146  Q
    ||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  11005738 agttacacccaaatttatttaaaatttaacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccctt 11005639  T
Q  147 accccctttcatccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatcttt 209  Q
    ||||||||||||||||||||||||||||||||||||    ||||||||||||||| |||||||    
T  11005638 accccctttcatccacaaatcaccatagatgtgcaa----ccaatatctgaatcaacatcttt 11005580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 47 - 186
Target Start/End: Complemental strand, 49332218 - 49332079
Alignment:
Q  47 agttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccctt 146  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49332218 agttacacccaaatttatttaaatttttacaataataccaaaattgtcctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccctt 49332119  T
Q  147 accccctttcatccacaaatcaccatagatgtgcaaccaa 186  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  49332118 accccctttcatccacaaatcaccatagatgtgcaaccaa 49332079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 47 - 186
Target Start/End: Original strand, 56162475 - 56162614
Alignment:
Q  47 agttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccctt 146  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  56162475 agttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcgttctgaaccctt 56162574  T
Q  147 accccctttcatccacaaatcaccatagatgtgcaaccaa 186  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  56162575 accccctttcatccacaaatcaccatagatgtgcaaccaa 56162614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 46 - 209
Target Start/End: Complemental strand, 28867802 - 28867643
Alignment:
Q  46 aagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccct 145  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  28867802 aagttacacttaaatttatttaaaattttacaataataccaaaattgctctcttcatgtaaatttttaaaaactcatcttttatgatcattctgaaccct 28867703  T
Q  146 taccccctttcatccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatcttt 209  Q
    |||||||||||||||||||||||||||||||||||||    ||||||||||||||| |||||||    
T  28867702 taccccctttcatccacaaatcaccatagatgtgcaa----ccaatatctgaatcaacatcttt 28867643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 47 - 209
Target Start/End: Original strand, 2491833 - 2491991
Alignment:
Q  47 agttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccctt 146  Q
    ||||||||| ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  2491833 agttacacccaaatttatttaaaatttaacaataatatcaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccctt 2491932  T
Q  147 accccctttcatccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatcttt 209  Q
    |||||||||||||||||||||||||||||||||    |||||||||||||||||| |||||||    
T  2491933 accccctttcatccacaaatcaccatagatgtg----caaccaatatctgaatcaacatcttt 2491991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 47 - 209
Target Start/End: Original strand, 45884560 - 45884718
Alignment:
Q  47 agttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccctt 146  Q
    |||| ||| |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45884560 agtttcacttaaatttatttaaaattttacaataatatcaaaattgtcctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccctt 45884659  T
Q  147 accccctttcatccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatcttt 209  Q
    |||||||||||||||||||||||||||||||||    |||||||||||||||||| |||||||    
T  45884660 accccctttcatccacaaatcaccatagatgtg----caaccaatatctgaatcaacatcttt 45884718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 49 - 186
Target Start/End: Original strand, 50621666 - 50621803
Alignment:
Q  49 ttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaacccttac 148  Q
    ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  50621666 ttacacccaaatttatttaaaattttacaataataccaaaattgtcctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaacccttac 50621765  T
Q  149 cccctttcatccacaaatcaccatagatgtgcaaccaa 186  Q
    ||||||||||||||||||||||||||||||||||||||    
T  50621766 cccctttcatccacaaatcaccatagatgtgcaaccaa 50621803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 46 - 186
Target Start/End: Complemental strand, 24745077 - 24744937
Alignment:
Q  46 aagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccct 145  Q
    |||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||    
T  24745077 aagttacacccaaatttatttacaattttacaataataccaaaattgccctcttcatataaatttttaaaaatccatcttttataatcattctgaaccct 24744978  T
Q  146 taccccctttcatccacaaatcaccatagatgtgcaaccaa 186  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  24744977 taccccctttcatccacaaatcaccatagatgtgcaaccaa 24744937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 49 - 209
Target Start/End: Complemental strand, 36309087 - 36308931
Alignment:
Q  49 ttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaacccttac 148  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  36309087 ttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaacccttac 36308988  T
Q  149 cccctttcatccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatcttt 209  Q
     || ||||||||||||||||||||||||||||||    ||||||||||||||| |||||||    
T  36308987 tccttttcatccacaaatcaccatagatgtgcaa----ccaatatctgaatcaacatcttt 36308931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 47 - 186
Target Start/End: Original strand, 54202332 - 54202471
Alignment:
Q  47 agttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccctt 146  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  54202332 agttacacccaaatttatttaaaattttacaataataccaaaattgtcctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccctt 54202431  T
Q  147 accccctttcatccacaaatcaccatagatgtgcaaccaa 186  Q
    |||||||||||||||||||||||||||||| |||||||||    
T  54202432 accccctttcatccacaaatcaccatagatttgcaaccaa 54202471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 47 - 209
Target Start/End: Complemental strand, 27767721 - 27767564
Alignment:
Q  47 agttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccctt 146  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  27767721 agttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcgttctgaaccctt 27767622  T
Q  147 accccctttcatccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatcttt 209  Q
    | |||||||||||||||||||||||||||||||    |||||||||||||||||| |||||||    
T  27767621 a-cccctttcatccacaaatcaccatagatgtg----caaccaatatctgaatcaacatcttt 27767564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 49 - 186
Target Start/End: Original strand, 29923605 - 29923742
Alignment:
Q  49 ttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaacccttac 148  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | |||||||||||||||| |||||||||||    
T  29923605 ttacacctaaatttatttaaaattttacaataatactaaaattgccctcttcatgtaaatttttaaaaacctatcttttatgatcattttgaacccttac 29923704  T
Q  149 cccctttcatccacaaatcaccatagatgtgcaaccaa 186  Q
    ||||||||||||||||||||||||||||||||||||||    
T  29923705 cccctttcatccacaaatcaccatagatgtgcaaccaa 29923742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 121; E-Value: 3e-62
Query Start/End: Original strand, 46 - 186
Target Start/End: Complemental strand, 17445747 - 17445607
Alignment:
Q  46 aagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccct 145  Q
    |||||||||| |||||||||||||||||||||||||||||||||||  ||||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  17445747 aagttacacccaaatttatttaaaattttacaataataccaaaattatcctcttcatgtaaatttctaaaaacccatcttttatgatcattctgaaccct 17445648  T
Q  146 taccccctttcatccacaaatcaccatagatgtgcaaccaa 186  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  17445647 taccccctttcatccacaaatcaccatagatgtgcaaccaa 17445607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 45 - 209
Target Start/End: Complemental strand, 36225221 - 36225061
Alignment:
Q  45 taagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccc 144  Q
    ||||||||| | ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |    
T  36225221 taagttacatccaaatttatttaaaattttacaataatatcaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaactc 36225122  T
Q  145 ttaccccctttcatccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatcttt 209  Q
    |||| |||||||||||||||||||||||||||||||||    ||||||||||||||| |||||||    
T  36225121 ttactccctttcatccacaaatcaccatagatgtgcaa----ccaatatctgaatcaacatcttt 36225061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 119; E-Value: 5e-61
Query Start/End: Original strand, 46 - 209
Target Start/End: Complemental strand, 3875752 - 3875593
Alignment:
Q  46 aagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccct 145  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||||    
T  3875752 aagttacacccaaatttatttaaaattttacaataataccaaaattgtcctcttcatgtaaatttttaaaaacccatattttatgatcattctgaaccct 3875653  T
Q  146 taccccctttcatccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatcttt 209  Q
    || ||| ||||||||||||||||||||||||||||||    ||||||||||||||| |||||||    
T  3875652 tatcccatttcatccacaaatcaccatagatgtgcaa----ccaatatctgaatcaacatcttt 3875593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 119; E-Value: 5e-61
Query Start/End: Original strand, 46 - 209
Target Start/End: Complemental strand, 36432573 - 36432415
Alignment:
Q  46 aagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccct 145  Q
    ||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  36432573 aagttacacctaaatttatttaaaattttacaataacgtcaaaattgccctcttcatgtaaatttttaaaaa-ccatcttttatgatcattctgaaccct 36432475  T
Q  146 taccccctttcatccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatcttt 209  Q
    ||| |||||||||||||||||||||||||||||||||    ||||||||||||||| |||||||    
T  36432474 tactccctttcatccacaaatcaccatagatgtgcaa----ccaatatctgaatcaacatcttt 36432415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 46 - 209
Target Start/End: Complemental strand, 3932076 - 3931916
Alignment:
Q  46 aagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatc-catcttttatgatcattctgaaccc 144  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | |||||||||||||||||||||||||    
T  3932076 aagttacaccaaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttctaaaaacctcatcttttatgatcattctgaaccc 3931977  T
Q  145 ttaccccctttcatccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatcttt 209  Q
    ||||||||||| |||||||||||||||||||||||     ||||||||||||||||| |||||||    
T  3931976 ttacccccttttatccacaaatcaccatagatgtg----taaccaatatctgaatcaacatcttt 3931916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 45 - 209
Target Start/End: Complemental strand, 55282560 - 55282401
Alignment:
Q  45 taagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccc 144  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| |||||||||||||||||||||    
T  55282560 taagttacatctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaattttttaaaaacccatattttatgatcattctgaaccc 55282461  T
Q  145 ttaccccctttcatccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatcttt 209  Q
    ||| || ||||||||||||||||||||||||||||    |||||||||||||||||| |||||||    
T  55282460 tta-cctctttcatccacaaatcaccatagatgtg----caaccaatatctgaatcaacatcttt 55282401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 46 - 209
Target Start/End: Complemental strand, 33961888 - 33961729
Alignment:
Q  46 aagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccct 145  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||  |||||||| |||||||||||||||||    
T  33961888 aagttacacctaaatttatttaaaattttacaataatatcaaaattgccatcttcatgtaaatttttaaaaactcatcttttctgatcattctgaaccct 33961789  T
Q  146 taccccctttcatccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatcttt 209  Q
    ||| ||||||||||||||||||||||||| |||||||    ||||||||||||||| |||||||    
T  33961788 tactccctttcatccacaaatcaccataggtgtgcaa----ccaatatctgaatcaacatcttt 33961729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 45 - 209
Target Start/End: Complemental strand, 7327784 - 7327624
Alignment:
Q  45 taagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccc 144  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||| |     
T  7327784 taagttacatccaaatttatttaaaattttacaataataccaaaattgtcctcttcatgtaaatttttaaaaactcatcttttatgatcattctgaatct 7327685  T
Q  145 ttaccccctttcatccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatcttt 209  Q
    |||||||||||||||||||||||||||||||||||    |||| ||||||||||||| |||||||    
T  7327684 ttaccccctttcatccacaaatcaccatagatgtg----caacaaatatctgaatcaacatcttt 7327624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 46 - 209
Target Start/End: Complemental strand, 7554527 - 7554368
Alignment:
Q  46 aagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccct 145  Q
    |||||||||| |||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  7554527 aagttacacccaaatttatttcaaattttacaataataccaaaattgccatcttcatgtaaatttttaaaaacccatcttttatgatcattttgaaccct 7554428  T
Q  146 taccccctttcatccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatcttt 209  Q
    ||||||||||||| || ||| ||||||||||||||||    ||||||||||||||| |||||||    
T  7554427 taccccctttcattcataaaccaccatagatgtgcaa----ccaatatctgaatcaacatcttt 7554368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 48 - 169
Target Start/End: Complemental strand, 35949587 - 35949466
Alignment:
Q  48 gttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccctta 147  Q
    |||||||| |||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  35949587 gttacacccaaatttatttaaaattttacaataataccaaaattgtcctctttatgtaaatttttaaaaatccatcttttatgatcattctgaaccctta 35949488  T
Q  148 ccccctttcatccacaaatcac 169  Q
    ||||||||||||||||||||||    
T  35949487 ccccctttcatccacaaatcac 35949466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 46 - 186
Target Start/End: Complemental strand, 3874657 - 3874517
Alignment:
Q  46 aagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccct 145  Q
    |||||||| | |||||||||||||||| ||| ||||||||||||||| ||||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  3874657 aagttacatccaaatttatttaaaattgtactataataccaaaattgtcctcttcatgtaaatttctaaaaacccatcttttatgatcattctgaaccct 3874558  T
Q  146 taccccctttcatccacaaatcaccatagatgtgcaaccaa 186  Q
    |||||||||||||||||||||||||| ||||||||||||||    
T  3874557 taccccctttcatccacaaatcaccaaagatgtgcaaccaa 3874517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 47 - 209
Target Start/End: Original strand, 26488353 - 26488512
Alignment:
Q  47 agttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccctt 146  Q
    ||||||||| |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  26488353 agttacacccaaatttatttcaaattt-acaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccctt 26488451  T
Q  147 a--ccccctttcatccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatcttt 209  Q
    |  ||||||||||||||||||||| ||||||||||    |||||||||||||||||| |||||||    
T  26488452 accccccctttcatccacaaatcatcatagatgtg----caaccaatatctgaatcaacatcttt 26488512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 45 - 209
Target Start/End: Original strand, 20492503 - 20492663
Alignment:
Q  45 taagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccc 144  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||  ||||||||||||||||||| || |     
T  20492503 taagttacatcgaaatttatttaaaattttacaataataccaaaattgtcctcttcatgtaaatttttaaaaactcatcttttatgatcattctaaaaca 20492602  T
Q  145 ttaccccctttcatccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatcttt 209  Q
    |||||||||||||||||||||||||||||||||||    |||| ||||||||||||| |||||||    
T  20492603 ttaccccctttcatccacaaatcaccatagatgtg----caactaatatctgaatcaacatcttt 20492663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 47 - 169
Target Start/End: Complemental strand, 29933619 - 29933497
Alignment:
Q  47 agttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccctt 146  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||    
T  29933619 agttacatctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgattattctgaaccctt 29933520  T
Q  147 accccctttcatccacaaatcac 169  Q
    |||| ||||||||||||||||||    
T  29933519 accctctttcatccacaaatcac 29933497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 47 - 169
Target Start/End: Complemental strand, 43957945 - 43957823
Alignment:
Q  47 agttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccctt 146  Q
    |||||| || |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| ||||||||||||||||||||||||||||    
T  43957945 agttacccccaaatttatttaaaattttacaataataccaaaattgcccttttcatgtaaaattttaaaaacccatcttttatgatcattctgaaccctt 43957846  T
Q  147 accccctttcatccacaaatcac 169  Q
    |||||||||||||||||||||||    
T  43957845 accccctttcatccacaaatcac 43957823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 57 - 169
Target Start/End: Original strand, 55541836 - 55541948
Alignment:
Q  57 aaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaacccttaccccctttc 156  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  55541836 aaatttatttaaaattttacaataataccaaaattgctctcttcatgtaaaattttaaaaacccatcttttatgatcattctgaacccttaccccctttc 55541935  T
Q  157 atccacaaatcac 169  Q
    |||||||||||||    
T  55541936 atccacaaatcac 55541948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 47 - 186
Target Start/End: Original strand, 11308768 - 11308907
Alignment:
Q  47 agttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccctt 146  Q
    ||||||||  ||||||||||||||||||||||| |||||||||||||||| ||||||||||||| |||||| |||||||||||||||||||||||  ||     
T  11308768 agttacactcaaatttatttaaaattttacaattataccaaaattgccctgttcatgtaaatttctaaaaacccatcttttatgatcattctgaattctc 11308867  T
Q  147 accccctttcatccacaaatcaccatagatgtgcaaccaa 186  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  11308868 accccctttcatccacaaatcaccatatatgtgcaaccaa 11308907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 56 - 209
Target Start/End: Complemental strand, 41764766 - 41764618
Alignment:
Q  56 taaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaacccttacccccttt 155  Q
    |||||||||||||||||||||||||||| |||||||| | ||||||||||||||||||||||   |||||||||||||||||||||| |||||| |||||    
T  41764766 taaatttatttaaaattttacaataatatcaaaattgtc-tcttcatgtaaatttttaaaaacttatcttttatgatcattctgaactcttacctccttt 41764668  T
Q  156 catccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatcttt 209  Q
     ||||||||||||||||||||||||||    ||||||||||||||| |||||||    
T  41764667 tatccacaaatcaccatagatgtgcaa----ccaatatctgaatcaacatcttt 41764618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 57 - 183
Target Start/End: Original strand, 44878054 - 44878180
Alignment:
Q  57 aaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaacccttaccccctttc 156  Q
    |||||||||||||| ||||||||||||| ||||||| ||||||||||||||||| || |||  |||||||||||||| ||||||||| | ||||||||||    
T  44878054 aaatttatttaaaaatttacaataatactaaaattgtcctcttcatgtaaatttctagaaactcatcttttatgatcgttctgaaccttcaccccctttc 44878153  T
Q  157 atccacaaatcaccatagatgtgcaac 183  Q
    ||||| |||||||||||||||||||||    
T  44878154 atccataaatcaccatagatgtgcaac 44878180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 46 - 209
Target Start/End: Complemental strand, 28573855 - 28573709
Alignment:
Q  46 aagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccct 145  Q
    |||||||||| ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||  |||||             ||||||||    
T  28573855 aagttacacccaaatttatttaaaattttacagtaatatcaaaattgccctcttcatgtaaatttttaaaaactcatct-------------tgaaccct 28573769  T
Q  146 taccccctttcatccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatcttt 209  Q
    |||||||||||||||||||||||| |||||||||    |||||||||||||||||| |||||||    
T  28573768 taccccctttcatccacaaatcactatagatgtg----caaccaatatctgaatcaacatcttt 28573709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 57 - 186
Target Start/End: Complemental strand, 11381995 - 11381867
Alignment:
Q  57 aaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaacccttaccccctttc 156  Q
    ||||||||||||||||||||||||||| ||||||||| || |||| |||||||| ||||||  ||||||||||||||||||| ||  || | ||||||||    
T  11381995 aaatttatttaaaattttacaataatatcaaaattgctctgttcaagtaaatttctaaaaactcatcttttatgatcattctaaattctca-cccctttc 11381897  T
Q  157 atccacaaatcaccatagatgtgcaaccaa 186  Q
    |||||||||||| |||||||||||||||||    
T  11381896 atccacaaatcatcatagatgtgcaaccaa 11381867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 47 - 178
Target Start/End: Complemental strand, 7326525 - 7326393
Alignment:
Q  47 agttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaa-tccatcttttatgatcattctgaaccct 145  Q
    ||||||||| ||||||||||||||||||| ||||||||  |||||||||||| |||||||| || ||||||  |||| ||| ||||||||| |||||| |    
T  7326525 agttacacccaaatttatttaaaattttagaataatactgaaattgccctctccatgtaaaattctaaaaaccccatttttcatgatcattttgaacctt 7326426  T
Q  146 taccccctttcatccacaaatcaccatagatgt 178  Q
    || || |||||| ||||||| ||||||||||||    
T  7326425 taacctctttcacccacaaaccaccatagatgt 7326393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 96
Target Start/End: Complemental strand, 15506633 - 15506585
Alignment:
Q  48 gttacacctaaatttatttaaaattttacaataataccaaaattgccct 96  Q
    |||||||| ||||||| ||||||||||| |||||||| |||||||||||    
T  15506633 gttacacccaaatttacttaaaattttataataatacaaaaattgccct 15506585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 186
Target Start/End: Complemental strand, 41476763 - 41476629
Alignment:
Q  52 cacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaacccttacccc 151  Q
    |||| ||||||| ||||||||||||||  || ||||||||| |||||  |||||||||| | |||| |  | ||| || |||| | |||||| | || ||    
T  41476763 cacccaaatttacttaaaattttacaacgatgccaaaattgtcctctctatgtaaatttcttaaaacctttttttcattatcactttgaaccttcactcc 41476664  T
Q  152 ctttcatccacaaatcaccatagatgtgcaaccaa 186  Q
     ||||| ||||||| ||||||  ||||||||||||    
T  41476663 ttttcacccacaaaccaccatgaatgtgcaaccaa 41476629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 111
Target Start/End: Complemental strand, 7795368 - 7795306
Alignment:
Q  47 agttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttt 111  Q
    ||||||||| ||||||||| ||||||||| ||||||||||||| || ||| ||||| ||||||||    
T  7795368 agttacacccaaatttatt-aaaattttataataataccaaaactg-ccttttcatataaatttt 7795306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 178
Target Start/End: Original strand, 16319341 - 16319369
Alignment:
Q  150 ccctttcatccacaaatcaccatagatgt 178  Q
    |||||||||||||||||||||||||||||    
T  16319341 ccctttcatccacaaatcaccatagatgt 16319369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 135; Significance: 2e-70; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 46 - 209
Target Start/End: Complemental strand, 21867109 - 21866950
Alignment:
Q  46 aagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccct 145  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  21867109 aagttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccct 21867010  T
Q  146 taccccctttcatccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatcttt 209  Q
    |||||||||||||||||||||||||||||||||||||    ||||||||||||||| |||||||    
T  21867009 taccccctttcatccacaaatcaccatagatgtgcaa----ccaatatctgaatcaacatcttt 21866950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 46 - 209
Target Start/End: Complemental strand, 11124459 - 11124300
Alignment:
Q  46 aagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccct 145  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  11124459 aagttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattttgaaccct 11124360  T
Q  146 taccccctttcatccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatcttt 209  Q
    |||||||||||||||||||||||||||||||||||||    ||||||||||||||| |||||||    
T  11124359 taccccctttcatccacaaatcaccatagatgtgcaa----ccaatatctgaatcaacatcttt 11124300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 46 - 186
Target Start/End: Complemental strand, 14287577 - 14287437
Alignment:
Q  46 aagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccct 145  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| |    
T  14287577 aagttacacctaaatttatttaaaattttacaataataccaaaattgtcctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaacctt 14287478  T
Q  146 taccccctttcatccacaaatcaccatagatgtgcaaccaa 186  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  14287477 taccccctttcatccacaaatcaccatagatgtgcaaccaa 14287437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 46 - 186
Target Start/End: Complemental strand, 30787269 - 30787129
Alignment:
Q  46 aagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccct 145  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||    
T  30787269 aagttacacccaaatttatttaaaattttacaataataccaaaattgccctattcatgtaaatttttaaaaacccatcttttatgatcattctgaaccct 30787170  T
Q  146 taccccctttcatccacaaatcaccatagatgtgcaaccaa 186  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  30787169 taccccctttcatccacaaatcaccatagatgtgcaaccaa 30787129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 45 - 209
Target Start/End: Complemental strand, 2372219 - 2372059
Alignment:
Q  45 taagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccc 144  Q
    ||||||||| ||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2372219 taagttacatctaaatttatttaaacttttacaataatactaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccc 2372120  T
Q  145 ttaccccctttcatccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatcttt 209  Q
    |||||||||||||||||||||||||||||||||||    ||| |||||||||||||| |||||||    
T  2372119 ttaccccctttcatccacaaatcaccatagatgtg----caatcaatatctgaatcaacatcttt 2372059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 47 - 209
Target Start/End: Complemental strand, 19390696 - 19390538
Alignment:
Q  47 agttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccctt 146  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  19390696 agttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcgttctgaaccctt 19390597  T
Q  147 accccctttcatccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatcttt 209  Q
    ||||| ||||||||||||||||||||||||||||||    ||||||||||||||| |||||||    
T  19390596 accccttttcatccacaaatcaccatagatgtgcaa----ccaatatctgaatcaacatcttt 19390538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 47 - 186
Target Start/End: Complemental strand, 2380416 - 2380277
Alignment:
Q  47 agttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccctt 146  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  2380416 agttacacccaaatttatttaaatttttacaataataccaaaattgtcctcttcatgtaaatttttaaaaatcaatcttttatgatcattctgaaccctt 2380317  T
Q  147 accccctttcatccacaaatcaccatagatgtgcaaccaa 186  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  2380316 accccctttcatccacaaatcaccatagatgtgcaaccaa 2380277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 45 - 209
Target Start/End: Complemental strand, 26479979 - 26479819
Alignment:
Q  45 taagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccc 144  Q
    |||||||||||  ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  26479979 taagttacaccccaatttatttaaaattttacaataataccaaaattgtcctcttcatgtaaatttttaaaaaccaatcttttatgatcattctgaaccc 26479880  T
Q  145 ttaccccctttcatccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatcttt 209  Q
    ||||||||||||||||||||||||||||||||||||||    ||||||||||||||| |||||||    
T  26479879 ttaccccctttcatccacaaatcaccatagatgtgcaa----ccaatatctgaatcaacatcttt 26479819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 46 - 186
Target Start/End: Complemental strand, 17977873 - 17977732
Alignment:
Q  46 aagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaa-tccatcttttatgatcattctgaaccc 144  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  17977873 aagttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaaccccatcttttatgatcattctgaaccc 17977774  T
Q  145 ttaccccctttcatccacaaatcaccatagatgtgcaaccaa 186  Q
    ||||||||||||||||||||||||| ||||||||||||||||    
T  17977773 ttaccccctttcatccacaaatcacaatagatgtgcaaccaa 17977732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 121; E-Value: 3e-62
Query Start/End: Original strand, 47 - 209
Target Start/End: Original strand, 12242744 - 12242904
Alignment:
Q  47 agttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccctt 146  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  12242744 agttacacctaaatttatttaaaattttacaataataccaaaattgtcctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccctt 12242843  T
Q  147 accccc--tttcatccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatcttt 209  Q
    ||||||  |||||||||||||||| ||||||||||    |||||||||||||||||| |||||||    
T  12242844 accccccatttcatccacaaatcatcatagatgtg----caaccaatatctgaatcaacatcttt 12242904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 57 - 209
Target Start/End: Original strand, 2357349 - 2357497
Alignment:
Q  57 aaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaacccttaccccctttc 156  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  2357349 aaatttatttaaaattttacaataatactaaaattgtcctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaacccttaccccctttc 2357448  T
Q  157 atccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatcttt 209  Q
    |||||||||||||||||||||||    |||||||||||||||||| |||||||    
T  2357449 atccacaaatcaccatagatgtg----caaccaatatctgaatcaacatcttt 2357497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 46 - 209
Target Start/End: Original strand, 20115062 - 20115221
Alignment:
Q  46 aagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccct 145  Q
    |||||||||| |||||||||||||||||||||||||||||||||||  ||||||||||||||||||| |||| ||||||||||||||||||||||||| |    
T  20115062 aagttacacccaaatttatttaaaattttacaataataccaaaattttcctcttcatgtaaattttttaaaacccatcttttatgatcattctgaacctt 20115161  T
Q  146 taccccctttcatccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatcttt 209  Q
    ||||| ||||||||||||||||||||||||||||    |||||||||||||||||| |||||||    
T  20115162 taccctctttcatccacaaatcaccatagatgtg----caaccaatatctgaatcaacatcttt 20115221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 46 - 209
Target Start/End: Original strand, 25336525 - 25336684
Alignment:
Q  46 aagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccct 145  Q
    |||||||||| ||||||||||||||||||||||||||| |||||||| ||| |||||||||||||||||||||| |||||||||||| |||||||||| |    
T  25336525 aagttacacccaaatttatttaaaattttacaataatatcaaaattgtccttttcatgtaaatttttaaaaatctatcttttatgattattctgaacctt 25336624  T
Q  146 taccccctttcatccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatcttt 209  Q
    ||||||||||||||||||||||||||||||||||    |||||||||||||||||| |||||||    
T  25336625 taccccctttcatccacaaatcaccatagatgtg----caaccaatatctgaatcaacatcttt 25336684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 46 - 186
Target Start/End: Complemental strand, 33965571 - 33965431
Alignment:
Q  46 aagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccct 145  Q
    |||||||||| ||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  33965571 aagttacacccaaatttatttaaaattttacaataatatcaaaattgtcctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccct 33965472  T
Q  146 taccccctttcatccacaaatcaccatagatgtgcaaccaa 186  Q
    | ||| |||||||||||||||||||||| ||||||||||||    
T  33965471 tgccctctttcatccacaaatcaccataaatgtgcaaccaa 33965431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 46 - 186
Target Start/End: Original strand, 4049460 - 4049599
Alignment:
Q  46 aagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccct 145  Q
    |||||||||| ||||||||||||||||||||||||||| |||||||| | |||||||||||||||||||||| |||||||||||||| ||||||||||||    
T  4049460 aagttacacccaaatttatttaaaattttacaataatatcaaaattgtcttcttcatgtaaatttttaaaaa-ccatcttttatgattattctgaaccct 4049558  T
Q  146 taccccctttcatccacaaatcaccatagatgtgcaaccaa 186  Q
    |||||||||||||| ||||||||||||||||||||||||||    
T  4049559 taccccctttcatctacaaatcaccatagatgtgcaaccaa 4049599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 46 - 186
Target Start/End: Complemental strand, 41568832 - 41568692
Alignment:
Q  46 aagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccct 145  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| ||||||  ||||||||||||||||| ||||||||    
T  41568832 aagttacacctaaatttatttaaaattttacaataataccaaaattatcctcttcatgtaaatttctaaaaactcatcttttatgatcattttgaaccct 41568733  T
Q  146 taccccctttcatccacaaatcaccatagatgtgcaaccaa 186  Q
    |||||| |||||||||||||||||||||||||| |||||||    
T  41568732 taccccttttcatccacaaatcaccatagatgtacaaccaa 41568692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 46 - 186
Target Start/End: Original strand, 8113688 - 8113832
Alignment:
Q  46 aagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaacc-- 143  Q
    |||||||||| |||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||      
T  8113688 aagttacacccaaatttatttaaaattttactataataccaaaattgtcctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccct 8113787  T
Q  144 --cttaccccctttcatccacaaatcaccatagatgtgcaaccaa 186  Q
      ||||||||||||||||||||| |||||||||||||||||||||    
T  8113788 tacttaccccctttcatccacaagtcaccatagatgtgcaaccaa 8113832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 46 - 183
Target Start/End: Original strand, 6034412 - 6034550
Alignment:
Q  46 aagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaa-tccatcttttatgatcattctgaaccc 144  Q
    |||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  6034412 aagttacacccaaatttatttaaaattttataataatactaaaattgccctcttcatgtaaatttttaaaaaccccatcttttatgatcattctgaaccc 6034511  T
Q  145 ttaccccctttcatccacaaatcaccatagatgtgcaac 183  Q
    |||| |||||||||||||||||||| |||||||||||||    
T  6034512 ttacaccctttcatccacaaatcactatagatgtgcaac 6034550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 46 - 179
Target Start/End: Complemental strand, 31547400 - 31547267
Alignment:
Q  46 aagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccct 145  Q
    |||||| ||| |||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  31547400 aagttagacccaaatttatttaaaattttacaataataccaaaattgtcatcttcatgtaaatttttaaaaattcatcttttatgatcattctgaaccct 31547301  T
Q  146 taccccctttcatccacaaatcaccatagatgtg 179  Q
    |||| ||||||||||||||||||||||| |||||    
T  31547300 tacctcctttcatccacaaatcaccatatatgtg 31547267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 49 - 186
Target Start/End: Complemental strand, 39430382 - 39430245
Alignment:
Q  49 ttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaacccttac 148  Q
    ||||||| ||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||||||  ||| |||||||||||||||||||||||||    
T  39430382 ttacacccaaatttatttaaaattttacaataataccaaaattgttctcttcatgtaaatttctaaaaactcatattttatgatcattctgaacccttac 39430283  T
Q  149 cccctttcatccacaaatcaccatagatgtgcaaccaa 186  Q
    ||| ||||||||||||||||||||||||||||||||||    
T  39430282 cccttttcatccacaaatcaccatagatgtgcaaccaa 39430245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 46 - 182
Target Start/End: Original strand, 11978763 - 11978899
Alignment:
Q  46 aagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccct 145  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | ||||  |||||||||||||||| |||| ||||||||||||||||||| ||    
T  11978763 aagttacacctaaatttatttaaaattttacaataataccaaaattgtcatctttctgtaaatttttaaaaacccattttttatgatcattctgaactct 11978862  T
Q  146 taccccctttcatccacaaatcaccatagatgtgcaa 182  Q
    || ||||||||||||||||||||||||||||||||||    
T  11978863 tatcccctttcatccacaaatcaccatagatgtgcaa 11978899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 49 - 157
Target Start/End: Complemental strand, 1222746 - 1222638
Alignment:
Q  49 ttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaacccttac 148  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||| |||||||||||||||||||||||  ||||||||||||||||||||||||||||     
T  1222746 ttacacccaaatttatttagaattttacaataatactaaaattgctctcttcatgtaaatttttaaaaactcatcttttatgatcattctgaacccttat 1222647  T
Q  149 cccctttca 157  Q
    |||||||||    
T  1222646 cccctttca 1222638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 47 - 91
Target Start/End: Original strand, 17435356 - 17435400
Alignment:
Q  47 agttacacctaaatttatttaaaattttacaataataccaaaatt 91  Q
    |||||||| |||||||||||||||||||||||||||| |||||||    
T  17435356 agttacacttaaatttatttaaaattttacaataatatcaaaatt 17435400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 48 - 96
Target Start/End: Complemental strand, 35006508 - 35006460
Alignment:
Q  48 gttacacctaaatttatttaaaattttacaataataccaaaattgccct 96  Q
    |||||||||||||||| |||||| |||||||||||| ||||||||||||    
T  35006508 gttacacctaaatttacttaaaagtttacaataatatcaaaattgccct 35006460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 48 - 91
Target Start/End: Original strand, 43652933 - 43652976
Alignment:
Q  48 gttacacctaaatttatttaaaattttacaataataccaaaatt 91  Q
    |||| ||| |||||||||||||||||||||||||||| ||||||    
T  43652933 gttatacccaaatttatttaaaattttacaataatactaaaatt 43652976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 133; Significance: 2e-69; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 133; E-Value: 2e-69
Query Start/End: Original strand, 46 - 186
Target Start/End: Complemental strand, 35393645 - 35393505
Alignment:
Q  46 aagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccct 145  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  35393645 aagttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccct 35393546  T
Q  146 taccccctttcatccacaaatcaccatagatgtgcaaccaa 186  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  35393545 taccccctttcatccacaaatcaccatagatgtgcaaccaa 35393505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 46 - 186
Target Start/End: Original strand, 8352380 - 8352520
Alignment:
Q  46 aagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccct 145  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  8352380 aagttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccct 8352479  T
Q  146 taccccctttcatccacaaatcaccatagatgtgcaaccaa 186  Q
    | |||||||||||||||||||||||||||||||||||||||    
T  8352480 tcccccctttcatccacaaatcaccatagatgtgcaaccaa 8352520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 46 - 209
Target Start/End: Original strand, 11020403 - 11020562
Alignment:
Q  46 aagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccct 145  Q
    ||||||||||  ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||    
T  11020403 aagttacacccgaatttatttaaaattttacaataataccaaaattgccctcttcatataaatttttaaaaacccatcttttatgatcattctgaaccct 11020502  T
Q  146 taccccctttcatccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatcttt 209  Q
    ||||||||||||||||||||||||||||||||||    |||||||||||||||||| |||||||    
T  11020503 taccccctttcatccacaaatcaccatagatgtg----caaccaatatctgaatcaacatcttt 11020562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 47 - 209
Target Start/End: Complemental strand, 38098907 - 38098749
Alignment:
Q  47 agttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccctt 146  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  38098907 agttacacccaaatttatttaaaattttacaataataccaaaattgtcctcttcatgtaaatttttaaaaacccatcttttatgatcgttctgaaccctt 38098808  T
Q  147 accccctttcatccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatcttt 209  Q
    ||||||||||||||||||||||||||||||||||||    ||||||||||||||| |||||||    
T  38098807 accccctttcatccacaaatcaccatagatgtgcaa----ccaatatctgaatcaacatcttt 38098749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 46 - 186
Target Start/End: Original strand, 27719242 - 27719382
Alignment:
Q  46 aagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccct 145  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  27719242 aagttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttctaaaaacccatcttttatgatcattctgaaccct 27719341  T
Q  146 taccccctttcatccacaaatcaccatagatgtgcaaccaa 186  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  27719342 taccctctttcatccacaaatcaccatagatgtgcaaccaa 27719382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 49 - 209
Target Start/End: Original strand, 30655004 - 30655160
Alignment:
Q  49 ttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaacccttac 148  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | || |||||||||||||||||||||||||    
T  30655004 ttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacctattttttatgatcattctgaacccttac 30655103  T
Q  149 cccctttcatccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatcttt 209  Q
    |||||||||||||||||||||||||||||||    |||||||||||||||||| |||||||    
T  30655104 cccctttcatccacaaatcaccatagatgtg----caaccaatatctgaatcaacatcttt 30655160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 45 - 183
Target Start/End: Original strand, 29997493 - 29997631
Alignment:
Q  45 taagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccc 144  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||| |||||||||||    
T  29997493 taagttacacccaaatttatttaaaattttacaataataccaaaattgccttcttcatgtaaatttttaaaaacccatcttttatgattattctgaaccc 29997592  T
Q  145 ttaccccctttcatccacaaatcaccatagatgtgcaac 183  Q
    |||||||||||||||||||||||||||||||||||||||    
T  29997593 ttaccccctttcatccacaaatcaccatagatgtgcaac 29997631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 46 - 209
Target Start/End: Original strand, 36781652 - 36781811
Alignment:
Q  46 aagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccct 145  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| ||||||||    
T  36781652 aagttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaactcatcttttatgatcattttgaaccct 36781751  T
Q  146 taccccctttcatccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatcttt 209  Q
    ||||||||||||||||||||||| ||||||||||    |||||||||||||||||| |||||||    
T  36781752 taccccctttcatccacaaatcatcatagatgtg----caaccaatatctgaatcaacatcttt 36781811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 121; E-Value: 3e-62
Query Start/End: Original strand, 46 - 186
Target Start/End: Complemental strand, 25487348 - 25487208
Alignment:
Q  46 aagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccct 145  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  25487348 aagttacacccaaatttatttaaaattttacaataataccaaaattgtcctcttcatgtaaatttctaaaaatccatcttttatgatcattctgaaccct 25487249  T
Q  146 taccccctttcatccacaaatcaccatagatgtgcaaccaa 186  Q
    || ||||||||||||||||||||||||||||||||| ||||    
T  25487248 tatcccctttcatccacaaatcaccatagatgtgcagccaa 25487208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 46 - 209
Target Start/End: Original strand, 33411045 - 33411205
Alignment:
Q  46 aagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaattttt-aaaaatccatcttttatgatcattctgaaccc 144  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||| |||||||    
T  33411045 aagttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaattttttaaaaacccatcttttatgatcattttgaaccc 33411144  T
Q  145 ttaccccctttcatccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatcttt 209  Q
    |||||| ||||||||||||||||||||||||||||    |||||||||||||||||| |||||||    
T  33411145 ttaccctctttcatccacaaatcaccatagatgtg----caaccaatatctgaatcaacatcttt 33411205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 119; E-Value: 5e-61
Query Start/End: Original strand, 47 - 169
Target Start/End: Original strand, 45084246 - 45084368
Alignment:
Q  47 agttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccctt 146  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45084246 agttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccctt 45084345  T
Q  147 accccctttcatccacaaatcac 169  Q
    |||||||||||||||||||||||    
T  45084346 accccctttcatccacaaatcac 45084368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 45 - 186
Target Start/End: Complemental strand, 30700141 - 30700000
Alignment:
Q  45 taagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccc 144  Q
    ||||||||||  ||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||| |||||||||||||||||||||||||    
T  30700141 taagttacactcaaatttatttaaaattttacaataatatcaaaattgccctctttgtgtaaatttttaaaaattcatcttttatgatcattctgaaccc 30700042  T
Q  145 ttaccccctttcatccacaaatcaccatagatgtgcaaccaa 186  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  30700041 ttaccccctttcatccacaaatcaccatagatgtgcaaccaa 30700000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 46 - 209
Target Start/End: Complemental strand, 483281 - 483122
Alignment:
Q  46 aagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccct 145  Q
    |||||||| | |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  483281 aagttacatccaaatttatttaaaattttacaataatactaaaattgtcctcttcatgtaaatttttaaaaacccatcttttatgatcattttgaaccct 483182  T
Q  146 taccccctttcatccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatcttt 209  Q
    ||||||||||||||||||||||||||||||||||    |||| ||||||||||||| |||||||    
T  483181 taccccctttcatccacaaatcaccatagatgtg----caactaatatctgaatcaacatcttt 483122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 46 - 209
Target Start/End: Original strand, 20187472 - 20187631
Alignment:
Q  46 aagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccct 145  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| | |||||||||||||||||||||| |||||||||||||||||| ||||| ||    
T  20187472 aagttacacctaaatttatttaaaattttacaataatatcaaaattgtcatcttcatgtaaatttttaaaaacccatcttttatgatcattatgaactct 20187571  T
Q  146 taccccctttcatccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatcttt 209  Q
    |||||||||||||| |||||||||||||||||||    |||||||||||||||||| |||||||    
T  20187572 taccccctttcatctacaaatcaccatagatgtg----caaccaatatctgaatcaacatcttt 20187631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 46 - 209
Target Start/End: Original strand, 20206541 - 20206700
Alignment:
Q  46 aagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccct 145  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| | |||||||||||||||||||||| |||||||||||||||||| ||||| ||    
T  20206541 aagttacacctaaatttatttaaaattttacaataatatcaaaattgtcatcttcatgtaaatttttaaaaacccatcttttatgatcattatgaactct 20206640  T
Q  146 taccccctttcatccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatcttt 209  Q
    |||||||||||||| |||||||||||||||||||    |||||||||||||||||| |||||||    
T  20206641 taccccctttcatctacaaatcaccatagatgtg----caaccaatatctgaatcaacatcttt 20206700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 46 - 186
Target Start/End: Original strand, 39780312 - 39780453
Alignment:
Q  46 aagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatcc-atcttttatgatcattctgaaccc 144  Q
    |||||||||| ||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  39780312 aagttacacccaaatttatttaaaattttataataatatcaaaattgccctcttcatgtaaatttttaaaaaccccatcttttatgatcattctgaaccc 39780411  T
Q  145 ttaccccctttcatccacaaatcaccatagatgtgcaaccaa 186  Q
    |||| |||||||||||||||||||||||||||||||||||||    
T  39780412 ttacaccctttcatccacaaatcaccatagatgtgcaaccaa 39780453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 47 - 186
Target Start/End: Original strand, 5458261 - 5458399
Alignment:
Q  47 agttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccctt 146  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||   |     
T  5458261 agttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttctaaaaacccatcttttatgatcattctgaa-tttc 5458359  T
Q  147 accccctttcatccacaaatcaccatagatgtgcaaccaa 186  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  5458360 accccctttcatccacaaatcaccatagatgtgcaaccaa 5458399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 46 - 186
Target Start/End: Complemental strand, 26416423 - 26416283
Alignment:
Q  46 aagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccct 145  Q
    |||||||| | ||||||||||||||||||||||||||| |||||| | ||||||||||||||||| |||||| |||||||||||||| ||||||||||||    
T  26416423 aagttacatccaaatttatttaaaattttacaataatatcaaaatggtcctcttcatgtaaatttctaaaaacccatcttttatgattattctgaaccct 26416324  T
Q  146 taccccctttcatccacaaatcaccatagatgtgcaaccaa 186  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  26416323 taccccctttcatccacaaatcacaatagatgtgcaaccaa 26416283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 45 - 209
Target Start/End: Complemental strand, 24757892 - 24757733
Alignment:
Q  45 taagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccc 144  Q
    ||||||||| | |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| |||| ||||||||||||||||||| |    
T  24757892 taagttacatccaaatttatttaaaattttacaataatactaaaattgtcctcttcatgtaaatttttaaaaacccat-ttttatgatcattctgaactc 24757794  T
Q  145 ttaccccctttcatccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatcttt 209  Q
    ||||||| |||||||||||||||||||||||||||    ||| |||||||||||||| |||||||    
T  24757793 ttaccccttttcatccacaaatcaccatagatgtg----caatcaatatctgaatcaacatcttt 24757733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 46 - 209
Target Start/End: Original strand, 12986671 - 12986828
Alignment:
Q  46 aagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccct 145  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||  ||||||||||||||||||||||||||    
T  12986671 aagttacacctaaatttatttaaaattttacaataatatcaaaattgccctcttcgtgtaaatttttaaaaactcatcttttatgatcattctgaaccct 12986770  T
Q  146 taccccctttcatccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatcttt 209  Q
    ||  || |||||||||||||| | ||||||||||     ||||||||||||||||| |||||||    
T  12986771 ta--ccatttcatccacaaattatcatagatgtg----aaaccaatatctgaatcaacatcttt 12986828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 48 - 186
Target Start/End: Complemental strand, 1105066 - 1104929
Alignment:
Q  48 gttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccctta 147  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||  |||||| |||||||||||||| ||||||||| || |    
T  1105066 gttacacctaaatttatttaaaattttacaataataccaaaattgctttcttcatgtaaattactaaaaacccatcttttatgataattctgaactctca 1104967  T
Q  148 ccccctttcatccacaaatcaccatagatgtgcaaccaa 186  Q
     ||||||||||||||||||||||||||||||||||||||    
T  1104966 -cccctttcatccacaaatcaccatagatgtgcaaccaa 1104929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 49 - 166
Target Start/End: Original strand, 32834592 - 32834709
Alignment:
Q  49 ttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaacccttac 148  Q
    |||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||| ||||||||||||||     
T  32834592 ttacacctaaatttatttaaaattttacaataataccaaaattgtcatcttcatgtaaatttttaaaaatccattttttatgattattctgaacccttat 32834691  T
Q  149 cccctttcatccacaaat 166  Q
    ||||||||||||||||||    
T  32834692 cccctttcatccacaaat 32834709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 46 - 154
Target Start/End: Original strand, 20818955 - 20819063
Alignment:
Q  46 aagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccct 145  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  20818955 aagttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttctaaaaacccatcttttatgatcattctgaaccct 20819054  T
Q  146 taccccctt 154  Q
    |||||||||    
T  20819055 taccccctt 20819063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 45 - 209
Target Start/End: Original strand, 31097514 - 31097665
Alignment:
Q  45 taagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccc 144  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||| ||||||||||         |||||||    
T  31097514 taagttacacccaaatttatttaaaattttacaataataccaaaattgtcttcttcatgtaaatttttaaaaacccatctttta---------tgaaccc 31097604  T
Q  145 ttaccccctttcatccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatcttt 209  Q
    |||||||||||||||||||||||||||||||||||    |||||||||||||||||| |||||||    
T  31097605 ttaccccctttcatccacaaatcaccatagatgtg----caaccaatatctgaatcaacatcttt 31097665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 71 - 186
Target Start/End: Original strand, 18574818 - 18574934
Alignment:
Q  71 ttttacaataataccaaaattgccctcttcatgtaaatttttaaaaatc-catcttttatgatcattctgaacccttaccccctttcatccacaaatcac 169  Q
    ||||||||||||||||||||| |||||||||||||||||| |||||| | | ||||  || |||||| |||||||| |||||||||||||||||||||||    
T  18574818 ttttacaataataccaaaattaccctcttcatgtaaatttgtaaaaaactcttcttccattatcattttgaaccctcaccccctttcatccacaaatcac 18574917  T
Q  170 catagatgtgcaaccaa 186  Q
    |||||||||||||||||    
T  18574918 catagatgtgcaaccaa 18574934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 47 - 142
Target Start/End: Original strand, 13174239 - 13174334
Alignment:
Q  47 agttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaac 142  Q
    ||||||||  ||||||| ||||||||||||||||||||| |||||  |||||||| ||||||||||||||| || | ||| ||||||||| |||||    
T  13174239 agttacactcaaatttacttaaaattttacaataataccgaaattagcctcttcaagtaaatttttaaaaacccttttttcatgatcattatgaac 13174334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 71 - 182
Target Start/End: Original strand, 20524967 - 20525077
Alignment:
Q  71 ttttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaacccttaccccctttcatccacaaatcacc 170  Q
    ||||||||||||||| |||||| | ||||||||||||||||| |||| || ||||| || |||| | |||||| ||| ||| ||||| ||| |||||| |    
T  20524967 ttttacaataataccgaaattgtcttcttcatgtaaattttttaaaa-ccttctttcattatcactttgaacctttatcccttttcacccaaaaatcatc 20525065  T
Q  171 atagatgtgcaa 182  Q
    || |||||||||    
T  20525066 atggatgtgcaa 20525077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 48 - 91
Target Start/End: Original strand, 16584425 - 16584468
Alignment:
Q  48 gttacacctaaatttatttaaaattttacaataataccaaaatt 91  Q
    |||||||| ||||||| ||||||||||| |||||||||||||||    
T  16584425 gttacacccaaatttacttaaaattttataataataccaaaatt 16584468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 92
Target Start/End: Complemental strand, 29226013 - 29225979
Alignment:
Q  58 aatttatttaaaattttacaataataccaaaattg 92  Q
    |||||||||||||||||||||||||| ||||||||    
T  29226013 aatttatttaaaattttacaataatatcaaaattg 29225979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 131; Significance: 4e-68; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 46 - 209
Target Start/End: Complemental strand, 105832 - 105673
Alignment:
Q  46 aagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccct 145  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  105832 aagttacacctaaatttatttaaaatttaacaataataccaaaattgccttcttcatgtaaatttttaaaaatccatcttttatgataattctgaaccct 105733  T
Q  146 taccccctttcatccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatcttt 209  Q
    |||||||||||||||||||||||||||||||||||||    ||||||||||||||| |||||||    
T  105732 taccccctttcatccacaaatcaccatagatgtgcaa----ccaatatctgaatcaacatcttt 105673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0562 (Bit Score: 119; Significance: 5e-61; HSPs: 2)
Name: scaffold0562
Description:

Target: scaffold0562; HSP #1
Raw Score: 119; E-Value: 5e-61
Query Start/End: Original strand, 46 - 209
Target Start/End: Complemental strand, 6571 - 6412
Alignment:
Q  46 aagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccct 145  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||||    
T  6571 aagttacacccaaatttatttaaaattttacaataataccaaaattgtcctcttcatgtaaatttttaaaaacccatattttatgatcattctgaaccct 6472  T
Q  146 taccccctttcatccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatcttt 209  Q
    || ||| ||||||||||||||||||||||||||||||    ||||||||||||||| |||||||    
T  6471 tatcccatttcatccacaaatcaccatagatgtgcaa----ccaatatctgaatcaacatcttt 6412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0562; HSP #2
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 46 - 186
Target Start/End: Complemental strand, 5476 - 5336
Alignment:
Q  46 aagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccct 145  Q
    |||||||| | |||||||||||||||| ||| ||||||||||||||| ||||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  5476 aagttacatccaaatttatttaaaattgtactataataccaaaattgtcctcttcatgtaaatttctaaaaacccatcttttatgatcattctgaaccct 5377  T
Q  146 taccccctttcatccacaaatcaccatagatgtgcaaccaa 186  Q
    |||||||||||||||||||||||||| ||||||||||||||    
T  5376 taccccctttcatccacaaatcaccaaagatgtgcaaccaa 5336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1360 (Bit Score: 116; Significance: 3e-59; HSPs: 1)
Name: scaffold1360
Description:

Target: scaffold1360; HSP #1
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 46 - 209
Target Start/End: Complemental strand, 1071 - 911
Alignment:
Q  46 aagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatc-catcttttatgatcattctgaaccc 144  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | |||||||||||||||||||||||||    
T  1071 aagttacaccaaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttctaaaaacctcatcttttatgatcattctgaaccc 972  T
Q  145 ttaccccctttcatccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatcttt 209  Q
    ||||||||||| |||||||||||||||||||||||     ||||||||||||||||| |||||||    
T  971 ttacccccttttatccacaaatcaccatagatgtg----taaccaatatctgaatcaacatcttt 911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0189 (Bit Score: 115; Significance: 1e-58; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 47 - 169
Target Start/End: Complemental strand, 27937 - 27815
Alignment:
Q  47 agttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccctt 146  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  27937 agttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccctt 27838  T
Q  147 accccctttcatccacaaatcac 169  Q
    |||||||||||||||||||||||    
T  27837 accccctttcatccacaaatcac 27815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 104; Significance: 5e-52; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 47 - 186
Target Start/End: Original strand, 11112 - 11251
Alignment:
Q  47 agttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccctt 146  Q
    ||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||  |||||| |||||||||||||||||||||||||||     
T  11112 agttacatctaaatttatttaaaattttacaataataacaaaattgccctcttcatgtatattactaaaaacccatcttttatgatcattctgaaccctc 11211  T
Q  147 accccctttcatccacaaatcaccatagatgtgcaaccaa 186  Q
    | ||||||||||||| ||||||||||||||||||||||||    
T  11212 atcccctttcatccaaaaatcaccatagatgtgcaaccaa 11251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 104; Significance: 5e-52; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 45 - 186
Target Start/End: Complemental strand, 42806 - 42668
Alignment:
Q  45 taagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccc 144  Q
    ||||||||||  ||||||||||||||||||||||||   |||||||||||||||||||||||||||| |||| ||||||||||||||||||| |||||||    
T  42806 taagttacactcaaatttatttaaaattttacaata---ccaaaattgccctcttcatgtaaattttaaaaactccatcttttatgatcattttgaaccc 42710  T
Q  145 ttaccccctttcatccacaaatcaccatagatgtgcaaccaa 186  Q
    ||||||| ||||||||||||||||||||||||||||||||||    
T  42709 ttaccccatttcatccacaaatcaccatagatgtgcaaccaa 42668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0548 (Bit Score: 100; Significance: 1e-49; HSPs: 1)
Name: scaffold0548
Description:

Target: scaffold0548; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 47 - 186
Target Start/End: Original strand, 5258 - 5397
Alignment:
Q  47 agttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccctt 146  Q
    ||||||||  ||||||||||||||||||||||| |||||||||||||||| ||||||||||||| |||||| |||||||||||||||||||||||  ||     
T  5258 agttacactcaaatttatttaaaattttacaattataccaaaattgccctgttcatgtaaatttctaaaaacccatcttttatgatcattctgaattctc 5357  T
Q  147 accccctttcatccacaaatcaccatagatgtgcaaccaa 186  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  5358 accccctttcatccacaaatcaccatatatgtgcaaccaa 5397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 108 - 209
Target Start/End: Complemental strand, 19694 - 19597
Alignment:
Q  108 tttttaaaaatccatcttttatgatcattctgaacccttaccccctttcatccacaaatcaccatagatgtgcaaccaaccaatatctgaatcagcatct 207  Q
    |||||||||| |||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    ||||||||||||||| |||||    
T  19694 tttttaaaaacccattttttacgatcattctgaacccttaccccctttcatccacaaatcaccatagatgtgcaa----ccaatatctgaatcaacatct 19599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 62; Significance: 6e-27; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 46 - 119
Target Start/End: Complemental strand, 20467 - 20394
Alignment:
Q  46 aagttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatc 119  Q
    |||||||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||    
T  20467 aagttacacccaaatttatttaaaattttacaataatatcaaaattgccctcttaatgtaaatttttaaaaatc 20394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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