View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15962_high_63 (Length: 337)
Name: NF15962_high_63
Description: NF15962
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15962_high_63 |
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Alignment Details
Target: chr3 (Bit Score: 277; Significance: 1e-155; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 277; E-Value: 1e-155
Query Start/End: Original strand, 8 - 320
Target Start/End: Complemental strand, 47579198 - 47578886
Alignment:
| Q |
8 |
cgaagaaaatgcttagtcattgaaatcatttcacatttgttggttgatataataagaatcattgttatattatatatagtaagtattagtattaagtacg |
107 |
Q |
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| T |
47579198 |
cgaacaaaatgcttattcattgaaatcatttcacatttgttggttgatataataagaatcattgttatattatatatagtaagtaatagtattaagtatg |
47579099 |
T |
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| Q |
108 |
aataagagaatgaaaatactaacgccaaggtggaggactatttatgcaataatgaacaccaggtaattgctctttagctgggtgtgctactggtagttgt |
207 |
Q |
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| T |
47579098 |
aataagagaatgaaaatactaacgccaaggtggaggactatttatgcaatattgaacaccaggtaattgctctttagctgggtgtgctactggtagttgt |
47578999 |
T |
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| Q |
208 |
tcttgttttgcatctttggaccgtgatttcttgttgttgttgccgccatcaccgccacccccagcattatttccatttccaccatctccaccttcatttt |
307 |
Q |
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| T |
47578998 |
tcttgttttgcatctttggactgtgattttttgttgttgttgccgccatcaccgccgccaccagcattatttccatttccaccatctccaccttcatttt |
47578899 |
T |
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| Q |
308 |
gagccatatgttg |
320 |
Q |
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| T |
47578898 |
gagccatatgttg |
47578886 |
T |
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