View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15962_high_68 (Length: 330)
Name: NF15962_high_68
Description: NF15962
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15962_high_68 |
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Alignment Details
Target: chr8 (Bit Score: 294; Significance: 1e-165; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 294; E-Value: 1e-165
Query Start/End: Original strand, 16 - 317
Target Start/End: Complemental strand, 7630760 - 7630459
Alignment:
| Q |
16 |
tgattcactgcaaagtgcattgctgattctcctatcaacctccaagcttgatggacagttaagaaatctatcaaggggaagctcagaaatctctttttcg |
115 |
Q |
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| T |
7630760 |
tgattcactgcaaagtgcattgctgattctcctatcaacctccaagcttgatggacagttaagaaatctatcaaggggaagctcagaaatctctttttcg |
7630661 |
T |
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| Q |
116 |
acgtttggttttcgtcgtaagagtcttgttaactccttttgtagttttccaatttcttctggagtgaagtctggtacttcctctgaggaggattgatcct |
215 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
7630660 |
acgtttggttttcgtcgtaagagtcttgttaactccttttgtagttttccaatttcttctggagtgaagtctggtacttcctctgaggaggatggatcct |
7630561 |
T |
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| Q |
216 |
cttgttgtgtattttggttttctatgttttgtgtgatttcattgttgtttccaaatgttccaattgctagcaaactatgaggccaatcactaaattcttc |
315 |
Q |
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|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7630560 |
cttgttgtgtattttggttttctatgttttgtgtgatttcgttgttgtttccaaatgttccaattgctagcaaactatgaggccaatcactaaattcttc |
7630461 |
T |
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| Q |
316 |
tc |
317 |
Q |
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|| |
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| T |
7630460 |
tc |
7630459 |
T |
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