View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15962_high_92 (Length: 276)
Name: NF15962_high_92
Description: NF15962
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15962_high_92 |
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Alignment Details
Target: chr3 (Bit Score: 175; Significance: 3e-94; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 18 - 213
Target Start/End: Complemental strand, 25731264 - 25731067
Alignment:
| Q |
18 |
cataaaataccagtattccaataatgcaggagaatagaagctgaatcacgcacaggatgttctaattcatgagaggtgacattcgcaacatccgaaaaag |
117 |
Q |
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| T |
25731264 |
cataaaatagcagtattccaataatgcaggagaatggaagctgaatcacgcacaggatgttctaattcatgagaggtgacattcgcaacatccgaaaagg |
25731165 |
T |
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| Q |
118 |
aaataacatatcataaaaattaaggattgttgt--cgcccatgtgataatcaaaagagcaaactgaggccaatataaccaaaacaggaatccaccaaa |
213 |
Q |
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| T |
25731164 |
aaataacatatcataaaaattaaggattgttgtcgcgcccatgtgataatcaaaagagcaaactgaggccaatataaccaaaacaggaatccaccaaa |
25731067 |
T |
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