View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15962_low_104 (Length: 272)

Name: NF15962_low_104
Description: NF15962
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15962_low_104
NF15962_low_104
[»] chr5 (24 HSPs)
chr5 (11-210)||(38943753-38943952)
chr5 (209-272)||(18183456-18183519)
chr5 (210-272)||(24331555-24331617)
chr5 (212-272)||(2865242-2865302)
chr5 (208-272)||(8647925-8647989)
chr5 (212-272)||(19359623-19359683)
chr5 (209-272)||(15372360-15372423)
chr5 (213-272)||(29455229-29455288)
chr5 (214-272)||(5819416-5819474)
chr5 (212-272)||(5818927-5818987)
chr5 (214-270)||(8647438-8647494)
chr5 (212-272)||(24362323-24362383)
chr5 (214-269)||(7349507-7349562)
chr5 (214-272)||(164191-164249)
chr5 (214-272)||(19359136-19359194)
chr5 (208-269)||(8461421-8461482)
chr5 (212-261)||(14464018-14464067)
chr5 (210-264)||(15708967-15709021)
chr5 (211-272)||(14215730-14215791)
chr5 (212-272)||(8460928-8460988)
chr5 (216-272)||(15371873-15371928)
chr5 (212-272)||(18182968-18183028)
chr5 (215-272)||(4222209-4222266)
chr5 (216-264)||(14215243-14215291)
[»] chr2 (31 HSPs)
chr2 (207-272)||(26538566-26538631)
chr2 (210-269)||(43058822-43058881)
chr2 (213-272)||(7446341-7446400)
chr2 (209-272)||(18451318-18451381)
chr2 (209-272)||(20440518-20440581)
chr2 (212-269)||(28847185-28847242)
chr2 (212-272)||(11091007-11091067)
chr2 (212-272)||(22374318-22374378)
chr2 (208-272)||(28616607-28616671)
chr2 (211-270)||(239350-239409)
chr2 (209-272)||(7446833-7446896)
chr2 (213-272)||(18450829-18450888)
chr2 (213-272)||(20444748-20444807)
chr2 (215-272)||(35781150-35781207)
chr2 (212-272)||(1978106-1978166)
chr2 (212-272)||(1978596-1978656)
chr2 (212-272)||(11090519-11090579)
chr2 (212-272)||(22374812-22374872)
chr2 (208-272)||(40027134-40027198)
chr2 (216-272)||(40815347-40815403)
chr2 (214-270)||(43058333-43058389)
chr2 (213-272)||(26538096-26538155)
chr2 (213-264)||(28617109-28617160)
chr2 (217-272)||(40027627-40027682)
chr2 (209-264)||(40815840-40815895)
chr2 (215-272)||(239839-239896)
chr2 (217-272)||(8425847-8425902)
chr2 (217-272)||(14432145-14432200)
chr2 (211-269)||(3025463-3025521)
chr2 (216-270)||(15551501-15551555)
chr2 (214-270)||(35779708-35779764)
[»] chr7 (21 HSPs)
chr7 (212-272)||(35289388-35289448)
chr7 (203-272)||(2658828-2658897)
chr7 (208-272)||(19591012-19591076)
chr7 (208-272)||(38859128-38859192)
chr7 (214-272)||(19590525-19590583)
chr7 (208-269)||(37787257-37787318)
chr7 (212-272)||(4478187-4478247)
chr7 (213-272)||(37786766-37786825)
chr7 (206-272)||(32004606-32004672)
chr7 (212-265)||(34533789-34533842)
chr7 (212-272)||(19830418-19830478)
chr7 (213-268)||(19830910-19830965)
chr7 (217-272)||(29100338-29100393)
chr7 (214-272)||(35288903-35288961)
chr7 (217-269)||(4641443-4641495)
chr7 (213-269)||(38858642-38858698)
chr7 (212-271)||(34534279-34534338)
chr7 (214-272)||(32005101-32005159)
chr7 (210-272)||(38160947-38161009)
chr7 (220-272)||(23953216-23953268)
chr7 (212-272)||(28583437-28583497)
[»] chr6 (29 HSPs)
chr6 (212-272)||(1149463-1149523)
chr6 (205-271)||(11444978-11445044)
chr6 (210-272)||(22219840-22219902)
chr6 (205-270)||(11445476-11445541)
chr6 (211-272)||(12935154-12935215)
chr6 (212-272)||(20741098-20741158)
chr6 (213-272)||(23073998-23074057)
chr6 (212-272)||(18257135-18257195)
chr6 (212-272)||(23075615-23075675)
chr6 (213-265)||(31470314-31470366)
chr6 (214-272)||(11277069-11277127)
chr6 (212-270)||(12935646-12935704)
chr6 (211-272)||(2319669-2319730)
chr6 (217-270)||(18504922-18504975)
chr6 (215-272)||(18505406-18505463)
chr6 (213-265)||(15828135-15828187)
chr6 (210-270)||(28472633-28472693)
chr6 (210-270)||(29859822-29859882)
chr6 (217-272)||(10899942-10899997)
chr6 (209-272)||(10900417-10900480)
chr6 (213-272)||(20741591-20741650)
chr6 (214-272)||(18257624-18257682)
chr6 (213-272)||(11276589-11276648)
chr6 (214-272)||(1149919-1149977)
chr6 (214-272)||(4811372-4811430)
chr6 (210-272)||(31470803-31470865)
chr6 (217-270)||(2322707-2322760)
chr6 (215-264)||(15827639-15827688)
chr6 (216-272)||(29033436-29033492)
[»] chr1 (32 HSPs)
chr1 (212-272)||(18984117-18984177)
chr1 (210-272)||(21856038-21856100)
chr1 (215-272)||(8678542-8678599)
chr1 (212-269)||(50970276-50970333)
chr1 (212-272)||(26859546-26859606)
chr1 (216-272)||(33144406-33144462)
chr1 (213-269)||(39154510-39154566)
chr1 (213-268)||(5540309-5540364)
chr1 (205-272)||(9018964-9019031)
chr1 (214-265)||(29306953-29307004)
chr1 (213-272)||(50970765-50970824)
chr1 (214-272)||(8679028-8679086)
chr1 (212-270)||(15173582-15173640)
chr1 (215-272)||(4636458-4636515)
chr1 (215-272)||(5539817-5539874)
chr1 (207-272)||(15646185-15646250)
chr1 (209-270)||(29870108-29870169)
chr1 (216-272)||(47826966-47827022)
chr1 (217-272)||(15173099-15173154)
chr1 (213-272)||(15646682-15646741)
chr1 (213-272)||(18984606-18984665)
chr1 (213-272)||(29869619-29869678)
chr1 (204-270)||(9019452-9019518)
chr1 (208-270)||(26859053-26859115)
chr1 (214-272)||(29307429-29307487)
chr1 (222-272)||(33143925-33143975)
chr1 (216-272)||(17433702-17433758)
chr1 (214-270)||(21856532-21856588)
chr1 (205-272)||(2733444-2733511)
chr1 (217-272)||(5963065-5963120)
chr1 (213-272)||(52268289-52268348)
chr1 (215-272)||(5962579-5962636)
[»] chr3 (33 HSPs)
chr3 (210-272)||(29801903-29801965)
chr3 (212-272)||(31779139-31779199)
chr3 (208-272)||(43973927-43973991)
chr3 (211-270)||(20840557-20840616)
chr3 (213-272)||(31778652-31778711)
chr3 (209-272)||(32535450-32535513)
chr3 (214-272)||(39556064-39556122)
chr3 (209-270)||(24301045-24301106)
chr3 (213-270)||(39555577-39555634)
chr3 (209-272)||(26837842-26837905)
chr3 (209-272)||(30104477-30104540)
chr3 (212-265)||(4275858-4275911)
chr3 (211-272)||(5137468-5137529)
chr3 (213-270)||(20841050-20841107)
chr3 (216-265)||(25853721-25853770)
chr3 (215-272)||(51473429-51473486)
chr3 (209-269)||(37727420-37727480)
chr3 (213-272)||(37726928-37726987)
chr3 (211-270)||(48452986-48453045)
chr3 (214-272)||(25853234-25853292)
chr3 (211-272)||(17464488-17464549)
chr3 (213-270)||(23644461-23644518)
chr3 (213-270)||(27393660-27393717)
chr3 (213-270)||(27394066-27394123)
chr3 (209-272)||(23644952-23645015)
chr3 (217-272)||(25612464-25612519)
chr3 (217-272)||(26274570-26274625)
chr3 (213-272)||(30098250-30098309)
chr3 (214-272)||(29801356-29801414)
chr3 (212-270)||(37222060-37222118)
chr3 (214-272)||(50116896-50116954)
chr3 (217-270)||(32534962-32535015)
chr3 (212-272)||(5136978-5137038)
[»] chr4 (35 HSPs)
chr4 (203-272)||(22434168-22434237)
chr4 (211-272)||(23494930-23494991)
chr4 (212-272)||(15523233-15523293)
chr4 (212-272)||(51021282-51021342)
chr4 (209-270)||(11153636-11153697)
chr4 (212-272)||(25447723-25447783)
chr4 (208-272)||(25937664-25937728)
chr4 (213-272)||(15523721-15523780)
chr4 (214-269)||(35363091-35363146)
chr4 (210-272)||(20958346-20958408)
chr4 (214-272)||(25447247-25447305)
chr4 (214-272)||(46193405-46193463)
chr4 (208-269)||(4220049-4220110)
chr4 (210-270)||(22434665-22434725)
chr4 (200-272)||(25938158-25938230)
chr4 (216-272)||(46193892-46193948)
chr4 (213-272)||(16318263-16318322)
chr4 (217-272)||(48526668-48526723)
chr4 (216-270)||(4219559-4219613)
chr4 (211-265)||(18764014-18764068)
chr4 (211-265)||(20471005-20471059)
chr4 (214-272)||(45082911-45082969)
chr4 (211-272)||(12234326-12234387)
chr4 (216-272)||(2118295-2118351)
chr4 (216-272)||(23494445-23494501)
chr4 (212-272)||(33109951-33110011)
chr4 (216-272)||(38962306-38962362)
chr4 (212-272)||(54995554-54995614)
chr4 (213-272)||(10258374-10258433)
chr4 (209-272)||(51020792-51020855)
chr4 (214-272)||(12234816-12234874)
chr4 (216-269)||(33109686-33109739)
chr4 (214-270)||(16691560-16691616)
chr4 (212-268)||(48293592-48293648)
chr4 (212-272)||(54995067-54995127)
[»] chr8 (23 HSPs)
chr8 (208-272)||(11656449-11656513)
chr8 (209-269)||(34541038-34541098)
chr8 (212-272)||(41681132-41681192)
chr8 (205-272)||(19176281-19176348)
chr8 (210-272)||(19176777-19176839)
chr8 (217-272)||(9928912-9928967)
chr8 (213-272)||(9930144-9930203)
chr8 (213-272)||(13225126-13225185)
chr8 (210-264)||(12571859-12571913)
chr8 (210-272)||(33742918-33742980)
chr8 (213-266)||(11656950-11657003)
chr8 (215-272)||(31133707-31133764)
chr8 (212-272)||(4629795-4629855)
chr8 (208-272)||(9178122-9178186)
chr8 (212-272)||(31133218-31133278)
chr8 (213-272)||(44831246-44831305)
chr8 (214-272)||(41681621-41681679)
chr8 (211-269)||(44831735-44831793)
chr8 (217-269)||(4630276-4630328)
chr8 (217-261)||(12572349-12572393)
chr8 (207-270)||(10918119-10918182)
chr8 (217-272)||(33328161-33328216)
chr8 (212-272)||(11337009-11337069)
[»] scaffold1223 (2 HSPs)
scaffold1223 (214-272)||(1228-1286)
scaffold1223 (216-272)||(755-811)
[»] scaffold0951 (2 HSPs)
scaffold0951 (211-272)||(2154-2215)
scaffold0951 (212-272)||(1665-1725)
[»] scaffold0295 (2 HSPs)
scaffold0295 (211-272)||(4790-4851)
scaffold0295 (216-265)||(5285-5334)
[»] scaffold0176 (1 HSPs)
scaffold0176 (208-272)||(19108-19172)
[»] scaffold0057 (2 HSPs)
scaffold0057 (217-272)||(61945-62000)
scaffold0057 (212-270)||(61026-61084)
[»] scaffold0417 (1 HSPs)
scaffold0417 (214-272)||(11110-11168)
[»] scaffold0019 (1 HSPs)
scaffold0019 (210-272)||(134160-134222)
[»] scaffold0273 (1 HSPs)
scaffold0273 (212-272)||(4694-4754)
[»] scaffold0432 (1 HSPs)
scaffold0432 (217-264)||(10367-10414)
[»] scaffold1585 (1 HSPs)
scaffold1585 (215-272)||(568-625)
[»] scaffold0027 (2 HSPs)
scaffold0027 (217-270)||(42172-42225)
scaffold0027 (210-272)||(42645-42707)
[»] scaffold0007 (1 HSPs)
scaffold0007 (217-272)||(64792-64847)


Alignment Details
Target: chr5 (Bit Score: 192; Significance: 1e-104; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 11 - 210
Target Start/End: Complemental strand, 38943952 - 38943753
Alignment:
Q  11 gagatgaaccacatgttaataaattttcaaatgtcgaaatttacatatatgtttaatgtctagggggtcattgatgttactgctataagggtgcaatgct 110  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38943952 gagaagaaccacatgttaataaattttcaaatgtcgaaatttacatatatgtttaatgtctagggggtcattgatgttactgctataagggtgcaatgct 38943853  T
Q  111 tctattgaagttgccacctgatagttatttttcatgcgtaatgtagttgtgtggcagcaactatttggtggaggaatcattgaaggaaaaccattaaatt 210  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  38943852 tctattgaagttgccacctgatagttatttttcatgcgtaatgtagttgtgtggcagcaactatttggtggaggaatcattgaaggaaaacccttaaatt 38943753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 209 - 272
Target Start/End: Complemental strand, 18183519 - 18183456
Alignment:
Q  209 ttttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    ||||||||||||||||||||||  |||||||| ||||| |||||||||||||||||||||||||    
T  18183519 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccct 18183456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 210 - 272
Target Start/End: Original strand, 24331555 - 24331617
Alignment:
Q  210 tttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    |||||||||||||||||||||  |||||||| |||| ||||||||||||||||||||||||||    
T  24331555 tttaggcttaattacacttttggtcctcgtgttttgatctactcacgaaactggtcctgccct 24331617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 212 - 272
Target Start/End: Complemental strand, 2865302 - 2865242
Alignment:
Q  212 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    |||||||||||||||||||  |||||||| ||||| |||||||||||||||||||||||||    
T  2865302 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccct 2865242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 208 - 272
Target Start/End: Complemental strand, 8647989 - 8647925
Alignment:
Q  208 attttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    |||||||||||||||||||||||  |||||||| ||||| ||||||||||||||| |||||||||    
T  8647989 attttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgccct 8647925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 212 - 272
Target Start/End: Complemental strand, 19359683 - 19359623
Alignment:
Q  212 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    |||||||||||||||||||  |||||||| ||||| |||||||||||||||||||||||||    
T  19359683 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccct 19359623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 209 - 272
Target Start/End: Complemental strand, 15372423 - 15372360
Alignment:
Q  209 ttttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    ||||||| ||||||||||||||  |||||||| ||||| |||||||||||||||||||||||||    
T  15372423 ttttaggtttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccct 15372360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 213 - 272
Target Start/End: Complemental strand, 29455288 - 29455229
Alignment:
Q  213 aggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    |||||||||||||| |||  |||||||| |||||||||||||||||||||||||||||||    
T  29455288 aggcttaattacacctttggtcctcgtgttttggtctactcacgaaactggtcctgccct 29455229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 214 - 272
Target Start/End: Complemental strand, 5819474 - 5819416
Alignment:
Q  214 ggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    |||||||||||||||||  |||||||| ||||| |||||||||||||||||||||||||    
T  5819474 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccct 5819416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 212 - 272
Target Start/End: Original strand, 5818927 - 5818987
Alignment:
Q  212 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    |||| ||||||||||||||  |||||||| ||||| |||||||||||||||||||||||||    
T  5818927 taggtttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccct 5818987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 214 - 270
Target Start/End: Original strand, 8647438 - 8647494
Alignment:
Q  214 ggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcc 270  Q
    |||||||||||||||||  |||||||| ||||| |||||||||||||||||||||||    
T  8647438 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcc 8647494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 212 - 272
Target Start/End: Complemental strand, 24362383 - 24362323
Alignment:
Q  212 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    |||||||||||||||||||  |||||||  ||||| |||||||||||||||||||||||||    
T  24362383 taggcttaattacacttttggtcctcgtattttggcctactcacgaaactggtcctgccct 24362323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 214 - 269
Target Start/End: Complemental strand, 7349562 - 7349507
Alignment:
Q  214 ggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgc 269  Q
    |||||||||||||||||  |||||||| |||||||||||||||||| |||||||||    
T  7349562 ggcttaattacacttttggtcctcgtgttttggtctactcacgaaattggtcctgc 7349507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 214 - 272
Target Start/End: Original strand, 164191 - 164249
Alignment:
Q  214 ggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    |||||||||||||||||  |||||||| ||||  |||||||||||||||||||||||||    
T  164191 ggcttaattacacttttggtcctcgtgttttgacctactcacgaaactggtcctgccct 164249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 214 - 272
Target Start/End: Original strand, 19359136 - 19359194
Alignment:
Q  214 ggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    |||||||||||||||||  ||||| || ||||| |||||||||||||||||||||||||    
T  19359136 ggcttaattacacttttggtcctcttgttttggcctactcacgaaactggtcctgccct 19359194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 208 - 269
Target Start/End: Complemental strand, 8461482 - 8461421
Alignment:
Q  208 attttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgc 269  Q
    |||| ||||||||||||||||||  |||||||| ||||| ||||||||||||||| ||||||    
T  8461482 atttaaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgttcctgc 8461421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 212 - 261
Target Start/End: Complemental strand, 14464067 - 14464018
Alignment:
Q  212 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaact 261  Q
    |||||||||||||||||||| |||||||| ||||| ||||||||||||||    
T  14464067 taggcttaattacacttttagtcctcgtgttttggcctactcacgaaact 14464018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 210 - 264
Target Start/End: Original strand, 15708967 - 15709021
Alignment:
Q  210 tttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggt 264  Q
    |||||||||||||||||||||  |||| ||| ||||| |||||||||||||||||    
T  15708967 tttaggcttaattacacttttggtcctagtgttttggcctactcacgaaactggt 15709021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 211 - 272
Target Start/End: Complemental strand, 14215791 - 14215730
Alignment:
Q  211 ttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    ||||||||||||||| ||||  |||||||| ||||  ||||||||||||||| |||||||||    
T  14215791 ttaggcttaattacaattttggtcctcgtgttttgacctactcacgaaactgatcctgccct 14215730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 272
Target Start/End: Original strand, 8460928 - 8460988
Alignment:
Q  212 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    ||||||||||| |||||||  || ||||  ||||| |||||||||||||||||||||||||    
T  8460928 taggcttaattccacttttggtcatcgtattttggcctactcacgaaactggtcctgccct 8460988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 216 - 272
Target Start/End: Original strand, 15371873 - 15371928
Alignment:
Q  216 cttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    ||||||||||||||| ||||||||  ||||||||||||||| || ||||||||||||    
T  15371873 cttaattacacttttgatcctcgtattttggtctactcacg-aattggtcctgccct 15371928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 272
Target Start/End: Original strand, 18182968 - 18183028
Alignment:
Q  212 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    |||| ||||||||||||||  || ||||| ||||| |||||||||||||||||| ||||||    
T  18182968 taggtttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcatgccct 18183028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 215 - 272
Target Start/End: Complemental strand, 4222266 - 4222209
Alignment:
Q  215 gcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    ||||||||||||||||  |||||||| ||||| || ||||||||| ||||| ||||||    
T  4222266 gcttaattacacttttggtcctcgtgttttgggcttctcacgaaaatggtcatgccct 4222209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 216 - 264
Target Start/End: Original strand, 14215243 - 14215291
Alignment:
Q  216 cttaattacacttttaatcctcgtgatttggtctactcacgaaactggt 264  Q
    |||||||||||||||  |||||||| |||||  ||||||||||||||||    
T  14215243 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggt 14215291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 50; Significance: 1e-19; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 207 - 272
Target Start/End: Complemental strand, 26538631 - 26538566
Alignment:
Q  207 aattttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    ||||||||||||||||||||||||  |||||||| ||||| |||||||||||||||||||||||||    
T  26538631 aattttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccct 26538566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 210 - 269
Target Start/End: Complemental strand, 43058881 - 43058822
Alignment:
Q  210 tttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgc 269  Q
    ||||||||||||||||||||| ||||||||| ||||| ||||||||||||||||||||||    
T  43058881 tttaggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgc 43058822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 213 - 272
Target Start/End: Original strand, 7446341 - 7446400
Alignment:
Q  213 aggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    |||||||||||||||||| ||||||||| ||||||||||||| |||| ||||||||||||    
T  7446341 aggcttaattacacttttgatcctcgtgttttggtctactcatgaaattggtcctgccct 7446400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 209 - 272
Target Start/End: Complemental strand, 18451381 - 18451318
Alignment:
Q  209 ttttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    ||||||||||||||||||||||  |||||||| ||||| ||||| |||||||||||||||||||    
T  18451381 ttttaggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgccct 18451318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 209 - 272
Target Start/End: Complemental strand, 20440581 - 20440518
Alignment:
Q  209 ttttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    ||||||||||||||||||||||  |||||||| ||||| | |||||||||||||||||||||||    
T  20440581 ttttaggcttaattacacttttggtcctcgtgttttggccaactcacgaaactggtcctgccct 20440518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 212 - 269
Target Start/End: Complemental strand, 28847242 - 28847185
Alignment:
Q  212 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgc 269  Q
    |||||||||||||| ||||  |||||||| ||||||||||||||||||||||||||||    
T  28847242 taggcttaattacatttttggtcctcgtgttttggtctactcacgaaactggtcctgc 28847185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 212 - 272
Target Start/End: Complemental strand, 11091067 - 11091007
Alignment:
Q  212 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    |||||||||||||||||||  |||||||| ||||| |||||||||||||||||| ||||||    
T  11091067 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgccct 11091007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 212 - 272
Target Start/End: Original strand, 22374318 - 22374378
Alignment:
Q  212 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    |||||||||||||||||||  |||||||| ||||| |||||||||||||||||| ||||||    
T  22374318 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgccct 22374378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 208 - 272
Target Start/End: Original strand, 28616607 - 28616671
Alignment:
Q  208 attttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    ||||| |||||||||||||||||  |||||||| ||||| |||||||||||||||||| ||||||    
T  28616607 atttttggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgccct 28616671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 211 - 270
Target Start/End: Original strand, 239350 - 239409
Alignment:
Q  211 ttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcc 270  Q
    ||||||||||||||||||||  || ||||| ||||| |||||||||||||||||||||||    
T  239350 ttaggcttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcctgcc 239409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 209 - 272
Target Start/End: Complemental strand, 7446896 - 7446833
Alignment:
Q  209 ttttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    ||||||||||||||||| |||| ||||||||| ||||   ||||||||||||||||||||||||    
T  7446896 ttttaggcttaattacatttttgatcctcgtgttttgccttactcacgaaactggtcctgccct 7446833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 213 - 272
Target Start/End: Original strand, 18450829 - 18450888
Alignment:
Q  213 aggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    ||||||||||||||||||  |||||||| ||||| ||||||||||||||||||| |||||    
T  18450829 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtccagccct 18450888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 213 - 272
Target Start/End: Original strand, 20444748 - 20444807
Alignment:
Q  213 aggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    ||||||||||||||||||  |||||||| ||||| | |||||||||||||||||||||||    
T  20444748 aggcttaattacacttttggtcctcgtgttttggccaactcacgaaactggtcctgccct 20444807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 215 - 272
Target Start/End: Complemental strand, 35781207 - 35781150
Alignment:
Q  215 gcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    |||||||||||||||| ||||||||| ||||| |||||||||||| ||||| ||||||    
T  35781207 gcttaattacacttttgatcctcgtgttttggcctactcacgaaaatggtcatgccct 35781150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 212 - 272
Target Start/End: Original strand, 1978106 - 1978166
Alignment:
Q  212 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    |||||||||||||| ||||  |||| ||| ||||| |||||||||||||||||||||||||    
T  1978106 taggcttaattacatttttggtccttgtgttttggcctactcacgaaactggtcctgccct 1978166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 212 - 272
Target Start/End: Complemental strand, 1978656 - 1978596
Alignment:
Q  212 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    |||||||||||||||||||  |||| ||| ||||| |||||||||||| ||||||||||||    
T  1978656 taggcttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgccct 1978596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 212 - 272
Target Start/End: Original strand, 11090519 - 11090579
Alignment:
Q  212 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    |||| ||||||||||||||  |||||||| ||||| |||||||||||||| ||||||||||    
T  11090519 taggtttaattacacttttggtcctcgtgttttggcctactcacgaaacttgtcctgccct 11090579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 212 - 272
Target Start/End: Complemental strand, 22374872 - 22374812
Alignment:
Q  212 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    |||||||||||||||||||  |||||||| ||||| |||||||||||| ||||| ||||||    
T  22374872 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcttgccct 22374812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 208 - 272
Target Start/End: Original strand, 40027134 - 40027198
Alignment:
Q  208 attttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    |||| ||||||||||||||||||  || ||||| ||||| |||||||||||||||||| ||||||    
T  40027134 atttaaggcttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcatgccct 40027198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 216 - 272
Target Start/End: Original strand, 40815347 - 40815403
Alignment:
Q  216 cttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    |||||||||||||||  |||||||| ||||| |||||||||||||||||| ||||||    
T  40815347 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgccct 40815403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 214 - 270
Target Start/End: Original strand, 43058333 - 43058389
Alignment:
Q  214 ggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcc 270  Q
    ||||||||||||||||| ||||||||| ||||| | |||||| ||||||||||||||    
T  43058333 ggcttaattacacttttgatcctcgtgttttggccaactcactaaactggtcctgcc 43058389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 213 - 272
Target Start/End: Original strand, 26538096 - 26538155
Alignment:
Q  213 aggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    ||||||||||||||||||  |||||||| |||||  |||||||||||||||| |||||||    
T  26538096 aggcttaattacacttttggtcctcgtgttttggcttactcacgaaactggttctgccct 26538155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 213 - 264
Target Start/End: Complemental strand, 28617160 - 28617109
Alignment:
Q  213 aggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggt 264  Q
    ||||||||||||||||||  |||||||| ||||| |||||||||||||||||    
T  28617160 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggt 28617109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 217 - 272
Target Start/End: Complemental strand, 40027682 - 40027627
Alignment:
Q  217 ttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    ||||||||||||||  |||||||| ||||| |||||||||||| ||||||||||||    
T  40027682 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgccct 40027627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 209 - 264
Target Start/End: Complemental strand, 40815895 - 40815840
Alignment:
Q  209 ttttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggt 264  Q
    ||||||| ||||||||||||||  |||||||| ||||| |||||||||||||||||    
T  40815895 ttttaggtttaattacacttttggtcctcgtgttttggcctactcacgaaactggt 40815840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 215 - 272
Target Start/End: Complemental strand, 239896 - 239839
Alignment:
Q  215 gcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    ||||| ||||||||||  |||||||| ||||| |||||||||||| ||||||||||||    
T  239896 gcttagttacacttttggtcctcgtgttttggcctactcacgaaattggtcctgccct 239839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 217 - 272
Target Start/End: Complemental strand, 8425902 - 8425847
Alignment:
Q  217 ttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    ||||||||||||||  | || ||| |||||||||||||||||| ||||||||||||    
T  8425902 ttaattacacttttggttcttgtgttttggtctactcacgaaattggtcctgccct 8425847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 217 - 272
Target Start/End: Original strand, 14432145 - 14432200
Alignment:
Q  217 ttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    ||||||||||||||  |||||||| ||||| ||||||| |||||||||| ||||||    
T  14432145 ttaattacacttttggtcctcgtgttttggcctactcatgaaactggtcttgccct 14432200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 211 - 269
Target Start/End: Original strand, 3025463 - 3025521
Alignment:
Q  211 ttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgc 269  Q
    ||||| || |||||| ||||  |||||||| ||||| ||||||||||||||||||||||    
T  3025463 ttaggtttgattacatttttggtcctcgtgttttggcctactcacgaaactggtcctgc 3025521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 216 - 270
Target Start/End: Original strand, 15551501 - 15551555
Alignment:
Q  216 cttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcc 270  Q
    |||||||||||||||  |||||||| |||||| ||||||||||| ||||| ||||    
T  15551501 cttaattacacttttggtcctcgtgttttggtttactcacgaaaatggtcatgcc 15551555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 214 - 270
Target Start/End: Original strand, 35779708 - 35779764
Alignment:
Q  214 ggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcc 270  Q
    |||||||||||||||||  |||||||| ||||   ||||||||||| ||||||||||    
T  35779708 ggcttaattacacttttggtcctcgtgttttgacatactcacgaaaatggtcctgcc 35779764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 49; Significance: 4e-19; HSPs: 21)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 212 - 272
Target Start/End: Complemental strand, 35289448 - 35289388
Alignment:
Q  212 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    ||||||||||||||||||| ||||||||| ||||| |||||||||||||||||||||||||    
T  35289448 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgccct 35289388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 203 - 272
Target Start/End: Original strand, 2658828 - 2658897
Alignment:
Q  203 attaaattttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    ||||| || |||||||||||||||||||  |||||||| ||||| |||||||||||||||||||||||||    
T  2658828 attaatttctaggcttaattacactttttgtcctcgtgttttggcctactcacgaaactggtcctgccct 2658897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 208 - 272
Target Start/End: Complemental strand, 19591076 - 19591012
Alignment:
Q  208 attttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    |||||||||||||||||||||||  | |||||| ||||| |||||||||||||||||||||||||    
T  19591076 attttaggcttaattacacttttggtactcgtgttttggcctactcacgaaactggtcctgccct 19591012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 208 - 272
Target Start/End: Complemental strand, 38859192 - 38859128
Alignment:
Q  208 attttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    |||||||||||||||||||||||  |||||||| ||||| |||||||||||| ||||||||||||    
T  38859192 attttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgccct 38859128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 214 - 272
Target Start/End: Original strand, 19590525 - 19590583
Alignment:
Q  214 ggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    |||||||||||||||||  |||||||| ||||| |||||||||||||||||||||||||    
T  19590525 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccct 19590583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 208 - 269
Target Start/End: Complemental strand, 37787318 - 37787257
Alignment:
Q  208 attttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgc 269  Q
    |||||||||||||||| ||||||  |||||||| ||||| ||||||||||||||||||||||    
T  37787318 attttaggcttaattatacttttggtcctcgtgttttggcctactcacgaaactggtcctgc 37787257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 212 - 272
Target Start/End: Complemental strand, 4478247 - 4478187
Alignment:
Q  212 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    |||| |||| ||||||||| ||||||||| ||||| |||||||||||||||||||||||||    
T  4478247 taggtttaagtacacttttgatcctcgtgttttggcctactcacgaaactggtcctgccct 4478187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 213 - 272
Target Start/End: Original strand, 37786766 - 37786825
Alignment:
Q  213 aggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    ||||||||||||||||||  |||||||| ||||| ||||| |||||||||||||||||||    
T  37786766 aggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgccct 37786825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 206 - 272
Target Start/End: Original strand, 32004606 - 32004672
Alignment:
Q  206 aaattttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    ||||| |||||||||||||||||||  |||||||| ||||| |||||||||||| || |||||||||    
T  32004606 aaattataggcttaattacacttttggtcctcgtgttttggcctactcacgaaattgatcctgccct 32004672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 212 - 265
Target Start/End: Original strand, 34533789 - 34533842
Alignment:
Q  212 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtc 265  Q
    |||||||||||||||||||  |||||||| ||||| ||||||||||||||||||    
T  34533789 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtc 34533842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 212 - 272
Target Start/End: Original strand, 19830418 - 19830478
Alignment:
Q  212 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    |||| ||||||||||||||  |||||||| ||||| |||||||||||||||||| ||||||    
T  19830418 taggtttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgccct 19830478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 213 - 268
Target Start/End: Complemental strand, 19830965 - 19830910
Alignment:
Q  213 aggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctg 268  Q
    ||||||||||||||||||  |||||||| ||||| |||||||| ||||||||||||    
T  19830965 aggcttaattacacttttggtcctcgtgttttggcctactcacaaaactggtcctg 19830910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 217 - 272
Target Start/End: Complemental strand, 29100393 - 29100338
Alignment:
Q  217 ttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    ||||||||||||||  |||||||| |||||||||||||| ||| ||||||||||||    
T  29100393 ttaattacacttttggtcctcgtgttttggtctactcacaaaattggtcctgccct 29100338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 272
Target Start/End: Original strand, 35288903 - 35288961
Alignment:
Q  214 ggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    |||||||||||||||||  || ||||  ||||| |||||||||||||||||||||||||    
T  35288903 ggcttaattacacttttggtcatcgtattttggcctactcacgaaactggtcctgccct 35288961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 269
Target Start/End: Original strand, 4641443 - 4641495
Alignment:
Q  217 ttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgc 269  Q
    ||||||||||||||  |||||||| |||||  |||||||||||||||||||||    
T  4641443 ttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgc 4641495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 269
Target Start/End: Original strand, 38858642 - 38858698
Alignment:
Q  213 aggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgc 269  Q
    ||||||||| ||||||||  |||||||| |||||  |||||||||||||||||||||    
T  38858642 aggcttaataacacttttggtcctcgtgttttggcatactcacgaaactggtcctgc 38858698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 212 - 271
Target Start/End: Complemental strand, 34534338 - 34534279
Alignment:
Q  212 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 271  Q
    |||||||||||| ||||||  | |||||| ||||| ||||||||||||||| ||||||||    
T  34534338 taggcttaattatacttttggttctcgtgttttggcctactcacgaaactgatcctgccc 34534279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 214 - 272
Target Start/End: Complemental strand, 32005159 - 32005101
Alignment:
Q  214 ggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    |||||||||||||||||  ||||| || |||||  ||||||||||||||||| ||||||    
T  32005159 ggcttaattacacttttggtcctcatgttttggcatactcacgaaactggtcatgccct 32005101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 272
Target Start/End: Original strand, 38160947 - 38161009
Alignment:
Q  210 tttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    |||||||||||||||||||||  |||||| | ||||| |||||||||||| |  |||||||||    
T  38160947 tttaggcttaattacacttttggtcctcgggttttggcctactcacgaaaataatcctgccct 38161009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 272
Target Start/End: Complemental strand, 23953268 - 23953216
Alignment:
Q  220 attacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    |||||| ||||  |||||||| |||| |||||||||||||||||||| |||||    
T  23953268 attacatttttggtcctcgtgttttgatctactcacgaaactggtcccgccct 23953216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 212 - 272
Target Start/End: Original strand, 28583437 - 28583497
Alignment:
Q  212 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    |||||||||||||||||||  |||||||| ||||| ||||||| || | |||| |||||||    
T  28583437 taggcttaattacacttttggtcctcgtgttttggcctactcatgagattggttctgccct 28583497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 49; Significance: 4e-19; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 212 - 272
Target Start/End: Original strand, 1149463 - 1149523
Alignment:
Q  212 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    ||||||||||||||||||| ||||||||| ||||| |||||||||||||||||||||||||    
T  1149463 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgccct 1149523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 205 - 271
Target Start/End: Original strand, 11444978 - 11445044
Alignment:
Q  205 taaattttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccc 271  Q
    ||||||||||||||||||||||||||  |||||||| ||||| ||||||||||| ||||||||||||    
T  11444978 taaattttaggcttaattacacttttggtcctcgtgttttggcctactcacgaagctggtcctgccc 11445044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 210 - 272
Target Start/End: Complemental strand, 22219902 - 22219840
Alignment:
Q  210 tttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    |||||||||||||||||||||  |||||||| ||||| |||||||||||||||||||||||||    
T  22219902 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccct 22219840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 205 - 270
Target Start/End: Complemental strand, 11445541 - 11445476
Alignment:
Q  205 taaattttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcc 270  Q
    |||| |||||||||||||||||||||  |||||||| ||||| |||||||||||||||||||||||    
T  11445541 taaaatttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcc 11445476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 211 - 272
Target Start/End: Original strand, 12935154 - 12935215
Alignment:
Q  211 ttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    ||||||||||||||||||||  |||||||| ||||| |||||||||||||||||||||||||    
T  12935154 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccct 12935215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 212 - 272
Target Start/End: Original strand, 20741098 - 20741158
Alignment:
Q  212 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    |||||||||||||||||||  |||||||| ||||| |||||||||||||||||||||||||    
T  20741098 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccct 20741158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 213 - 272
Target Start/End: Original strand, 23073998 - 23074057
Alignment:
Q  213 aggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    ||||||||||||||||||  |||||||| ||||| |||||||||||||||||||||||||    
T  23073998 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccct 23074057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 212 - 272
Target Start/End: Original strand, 18257135 - 18257195
Alignment:
Q  212 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    |||||||||||||||||||  |||||||| |||||  ||||||||||||||||||||||||    
T  18257135 taggcttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcctgccct 18257195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 212 - 272
Target Start/End: Complemental strand, 23075675 - 23075615
Alignment:
Q  212 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    |||||||||||||||||||  |||||||| ||||| |||||||||||||||||| ||||||    
T  23075675 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgccct 23075615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 213 - 265
Target Start/End: Original strand, 31470314 - 31470366
Alignment:
Q  213 aggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtc 265  Q
    |||||||||||||||||| ||||||||| ||||| ||||||||||||||||||    
T  31470314 aggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtc 31470366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 214 - 272
Target Start/End: Complemental strand, 11277127 - 11277069
Alignment:
Q  214 ggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    |||||||||||||||||  |||||||| |||||  ||||||||||||||||||||||||    
T  11277127 ggcttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 11277069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 212 - 270
Target Start/End: Complemental strand, 12935704 - 12935646
Alignment:
Q  212 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcc 270  Q
    |||||||||||||||||||  |||||||| |||||  ||||||||||||||||||||||    
T  12935704 taggcttaattacacttttggtcctcgtgttttggcgtactcacgaaactggtcctgcc 12935646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 211 - 272
Target Start/End: Original strand, 2319669 - 2319730
Alignment:
Q  211 ttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    ||||||||||||||| ||||  |||||||| ||||| |||||||||||||||||| ||||||    
T  2319669 ttaggcttaattacatttttggtcctcgtgttttggcctactcacgaaactggtcatgccct 2319730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 217 - 270
Target Start/End: Original strand, 18504922 - 18504975
Alignment:
Q  217 ttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcc 270  Q
    ||||||||||||||  |||||||| ||||| |||||||||||||||||||||||    
T  18504922 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcc 18504975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 215 - 272
Target Start/End: Complemental strand, 18505463 - 18505406
Alignment:
Q  215 gcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    ||||||||| ||||||  |||||||| ||||||||||||||||||||| |||||||||    
T  18505463 gcttaattatacttttggtcctcgtgttttggtctactcacgaaactgatcctgccct 18505406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 213 - 265
Target Start/End: Complemental strand, 15828187 - 15828135
Alignment:
Q  213 aggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtc 265  Q
    ||||||||||||||||||  |||||||| ||||| ||||||||||||||||||    
T  15828187 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtc 15828135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 210 - 270
Target Start/End: Original strand, 28472633 - 28472693
Alignment:
Q  210 tttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcc 270  Q
    |||||||||||||||||||||  |||||||| ||||| | |||||||||| ||||||||||    
T  28472633 tttaggcttaattacacttttggtcctcgtgttttggccaactcacgaaagtggtcctgcc 28472693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 210 - 270
Target Start/End: Original strand, 29859822 - 29859882
Alignment:
Q  210 tttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcc 270  Q
    |||||||||||||||||||||  |||||||| ||||| | |||||||||| ||||||||||    
T  29859822 tttaggcttaattacacttttggtcctcgtgttttggccaactcacgaaagtggtcctgcc 29859882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 217 - 272
Target Start/End: Original strand, 10899942 - 10899997
Alignment:
Q  217 ttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    ||||||||||||||  || ||||| ||||| |||||||||||||||||||||||||    
T  10899942 ttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcctgccct 10899997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 209 - 272
Target Start/End: Complemental strand, 10900480 - 10900417
Alignment:
Q  209 ttttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    |||| |||||||||||||||||  |||||||  ||||| |||||||||||||||||| ||||||    
T  10900480 tttttggcttaattacacttttggtcctcgtattttggcctactcacgaaactggtcatgccct 10900417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 213 - 272
Target Start/End: Complemental strand, 20741650 - 20741591
Alignment:
Q  213 aggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    ||||||||||||||| ||  |||||||| ||||| ||||||||||||||| |||||||||    
T  20741650 aggcttaattacactcttggtcctcgtgttttggcctactcacgaaactgatcctgccct 20741591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 272
Target Start/End: Complemental strand, 18257682 - 18257624
Alignment:
Q  214 ggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    |||||||||| ||||||  |||||||| ||||  |||||||||||||||||||||||||    
T  18257682 ggcttaattatacttttggtcctcgtgttttgacctactcacgaaactggtcctgccct 18257624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 213 - 272
Target Start/End: Original strand, 11276589 - 11276648
Alignment:
Q  213 aggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    |||||||||||||| |||| ||| |||| ||||||||||||| ||||||| |||| ||||    
T  11276589 aggcttaattacacgtttagtccgcgtgttttggtctactcatgaaactgatcctaccct 11276648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 214 - 272
Target Start/End: Complemental strand, 1149977 - 1149919
Alignment:
Q  214 ggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    |||||||||||||||||  |||||||| ||| | ||||||| |||||||||| ||||||    
T  1149977 ggcttaattacacttttggtcctcgtgttttagcctactcatgaaactggtcatgccct 1149919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 214 - 272
Target Start/End: Original strand, 4811372 - 4811430
Alignment:
Q  214 ggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    |||||||||||||||||  |||  ||  |||||||||||||||||||||||| ||||||    
T  4811372 ggcttaattacacttttggtcccagtattttggtctactcacgaaactggtcatgccct 4811430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 272
Target Start/End: Complemental strand, 31470865 - 31470803
Alignment:
Q  210 tttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    |||| ||||||||||||||||  |||| ||| ||| | ||||||||||||||||| |||||||    
T  31470865 tttatgcttaattacacttttggtccttgtgttttagcctactcacgaaactggttctgccct 31470803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 217 - 270
Target Start/End: Complemental strand, 2322760 - 2322707
Alignment:
Q  217 ttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcc 270  Q
    ||||||||||||||  || ||||| |||||||||||||||||||| ||| ||||    
T  2322760 ttaattacacttttggtcttcgtgttttggtctactcacgaaactagtcttgcc 2322707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 215 - 264
Target Start/End: Original strand, 15827639 - 15827688
Alignment:
Q  215 gcttaattacacttttaatcctcgtgatttggtctactcacgaaactggt 264  Q
    ||||||||||||||||  |||||||| |||||  ||||||||||||||||    
T  15827639 gcttaattacacttttggtcctcgtgttttggcttactcacgaaactggt 15827688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 216 - 272
Target Start/End: Original strand, 29033436 - 29033492
Alignment:
Q  216 cttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    |||||||||||||||  |||||||  ||||| || ||||||||| ||||||||||||    
T  29033436 cttaattacacttttggtcctcgtattttggcctgctcacgaaattggtcctgccct 29033492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 49; Significance: 4e-19; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 212 - 272
Target Start/End: Original strand, 18984117 - 18984177
Alignment:
Q  212 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    |||||||||||||||||||  |||||||| |||||||||||||||||||||||||||||||    
T  18984117 taggcttaattacacttttggtcctcgtgttttggtctactcacgaaactggtcctgccct 18984177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 210 - 272
Target Start/End: Original strand, 21856038 - 21856100
Alignment:
Q  210 tttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    ||||| |||||||||||||||  |||||||| |||| ||||||||||||||||||||||||||    
T  21856038 tttagacttaattacacttttggtcctcgtgttttgatctactcacgaaactggtcctgccct 21856100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 215 - 272
Target Start/End: Original strand, 8678542 - 8678599
Alignment:
Q  215 gcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    ||||||||||||||||  |||||||| ||||| |||||||||||||||||||||||||    
T  8678542 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccct 8678599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 212 - 269
Target Start/End: Original strand, 50970276 - 50970333
Alignment:
Q  212 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgc 269  Q
    |||||||||||||||||||  |||||||| ||||| ||||||||||||||||||||||    
T  50970276 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgc 50970333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 212 - 272
Target Start/End: Complemental strand, 26859606 - 26859546
Alignment:
Q  212 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    ||||||||||||||||||| ||||||||| ||||| ||||||||||||||  |||||||||    
T  26859606 taggcttaattacacttttgatcctcgtgttttgggctactcacgaaactaatcctgccct 26859546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 216 - 272
Target Start/End: Complemental strand, 33144462 - 33144406
Alignment:
Q  216 cttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    |||||||||||||||  |||||||| ||||| |||||||||||||||||||||||||    
T  33144462 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccct 33144406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 213 - 269
Target Start/End: Complemental strand, 39154566 - 39154510
Alignment:
Q  213 aggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgc 269  Q
    ||||||||||||||||||  |||||||| ||||| ||||||||||||||||||||||    
T  39154566 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgc 39154510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 213 - 268
Target Start/End: Complemental strand, 5540364 - 5540309
Alignment:
Q  213 aggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctg 268  Q
    ||||||||||||||||||  |||||||| ||||| |||||||||||||||||||||    
T  5540364 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctg 5540309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 205 - 272
Target Start/End: Original strand, 9018964 - 9019031
Alignment:
Q  205 taaattttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    |||| |||||||||||||||||||||  |||||||| ||||| ||||| ||||||||||| |||||||    
T  9018964 taaactttaggcttaattacacttttggtcctcgtgttttggcctactaacgaaactggttctgccct 9019031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 214 - 265
Target Start/End: Original strand, 29306953 - 29307004
Alignment:
Q  214 ggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtc 265  Q
    ||||||||||||||||| ||||||||| ||||| ||||||||||||||||||    
T  29306953 ggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtc 29307004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 213 - 272
Target Start/End: Complemental strand, 50970824 - 50970765
Alignment:
Q  213 aggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    ||||||||||||||||||  |||||||| ||||| ||||| |||||||||||||||||||    
T  50970824 aggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgccct 50970765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 214 - 272
Target Start/End: Complemental strand, 8679086 - 8679028
Alignment:
Q  214 ggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    |||||||||||||||||  |||||||| ||||| ||||||||| |||||||||||||||    
T  8679086 ggcttaattacacttttggtcctcgtgttttggcctactcacggaactggtcctgccct 8679028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 212 - 270
Target Start/End: Complemental strand, 15173640 - 15173582
Alignment:
Q  212 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcc 270  Q
    |||||||||||||||||||  |||||||| ||||| |||||||| ||||||||||||||    
T  15173640 taggcttaattacacttttggtcctcgtgttttggcctactcacaaaactggtcctgcc 15173582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 215 - 272
Target Start/End: Complemental strand, 4636515 - 4636458
Alignment:
Q  215 gcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    ||||||||||||||||  |||||||| ||||| ||||||||||||||| |||||||||    
T  4636515 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgccct 4636458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 215 - 272
Target Start/End: Original strand, 5539817 - 5539874
Alignment:
Q  215 gcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    ||||||||||||||||  |||||||| ||||| |||||||||||| ||||||||||||    
T  5539817 gcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgccct 5539874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 207 - 272
Target Start/End: Original strand, 15646185 - 15646250
Alignment:
Q  207 aattttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    |||| |||||||||||| ||||||  |||||||| ||||| |||||||||||||||||| ||||||    
T  15646185 aattctaggcttaattatacttttggtcctcgtgttttggcctactcacgaaactggtcatgccct 15646250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 209 - 270
Target Start/End: Complemental strand, 29870169 - 29870108
Alignment:
Q  209 ttttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcc 270  Q
    |||| |||||||||||||||||  |||||||| ||||| ||||||| |||||||||||||||    
T  29870169 tttttggcttaattacacttttggtcctcgtgttttggcctactcatgaaactggtcctgcc 29870108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 216 - 272
Target Start/End: Original strand, 47826966 - 47827022
Alignment:
Q  216 cttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    |||||||||||||||  |||||||| |||||||||||||||||| ||||| ||||||    
T  47826966 cttaattacacttttggtcctcgtgttttggtctactcacgaaaatggtcatgccct 47827022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 217 - 272
Target Start/End: Original strand, 15173099 - 15173154
Alignment:
Q  217 ttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    ||||||||||||||  |||||||| ||||| |||||||||||||| ||||||||||    
T  15173099 ttaattacacttttggtcctcgtgttttggcctactcacgaaactagtcctgccct 15173154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 213 - 272
Target Start/End: Complemental strand, 15646741 - 15646682
Alignment:
Q  213 aggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    ||||||||||||||||||  |||||||| ||||| ||||||||||||||| |||| ||||    
T  15646741 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctaccct 15646682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 213 - 272
Target Start/End: Complemental strand, 18984665 - 18984606
Alignment:
Q  213 aggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    ||||||||||||||||||  |||| ||| ||||| |||||||||||| ||||||||||||    
T  18984665 aggcttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgccct 18984606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 213 - 272
Target Start/End: Original strand, 29869619 - 29869678
Alignment:
Q  213 aggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    ||||||||||||||||||  |||||||| |||||  ||||||||||||||||| ||||||    
T  29869619 aggcttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcttgccct 29869678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 204 - 270
Target Start/End: Complemental strand, 9019518 - 9019452
Alignment:
Q  204 ttaaattttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcc 270  Q
    ||||| |||||||||||||||||||||  |||||||| ||||  |||||||| |||||||| |||||    
T  9019518 ttaaagtttaggcttaattacacttttggtcctcgtgttttgacctactcacaaaactggttctgcc 9019452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 270
Target Start/End: Original strand, 26859053 - 26859115
Alignment:
Q  208 attttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcc 270  Q
    ||||| |||||||||||||||||  |||| ||| ||||| ||||| |||||||||||||||||    
T  26859053 atttttggcttaattacacttttggtccttgtgttttggcctactaacgaaactggtcctgcc 26859115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 272
Target Start/End: Complemental strand, 29307487 - 29307429
Alignment:
Q  214 ggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    ||||||||| |||||||  |||||||| ||||  |||||||||||||||||||||||||    
T  29307487 ggcttaattgcacttttggtcctcgtgttttgacctactcacgaaactggtcctgccct 29307429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 222 - 272
Target Start/End: Original strand, 33143925 - 33143975
Alignment:
Q  222 tacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    |||||||||  |||||||| ||||| |||||||||||||||||||||||||    
T  33143925 tacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccct 33143975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 216 - 272
Target Start/End: Complemental strand, 17433758 - 17433702
Alignment:
Q  216 cttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    |||||||||||||||  |||||||| | ||| |||||||||||||||||| ||||||    
T  17433758 cttaattacacttttggtcctcgtgttctggcctactcacgaaactggtcatgccct 17433702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 270
Target Start/End: Complemental strand, 21856588 - 21856532
Alignment:
Q  214 ggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcc 270  Q
    |||||||||||||||||  |||||||| ||||| ||||||| ||||||| |||||||    
T  21856588 ggcttaattacacttttggtcctcgtgttttggcctactcatgaaactgatcctgcc 21856532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 205 - 272
Target Start/End: Complemental strand, 2733511 - 2733444
Alignment:
Q  205 taaattttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    ||||||||||||||||||| ||||||  |||| ||| ||||| ||| || ||||| ||||||||||||    
T  2733511 taaattttaggcttaattatacttttggtccttgtgttttggcctattcgcgaaattggtcctgccct 2733444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 217 - 272
Target Start/End: Complemental strand, 5963120 - 5963065
Alignment:
Q  217 ttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    ||||||||||||||  |||||||| ||||| ||||||||||||||| || ||||||    
T  5963120 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgccct 5963065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 213 - 272
Target Start/End: Original strand, 52268289 - 52268348
Alignment:
Q  213 aggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    ||||||||||||||||||  |||||||  ||||| || ||||||||| ||||||||||||    
T  52268289 aggcttaattacacttttggtcctcgtattttggcctgctcacgaaattggtcctgccct 52268348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 215 - 272
Target Start/End: Original strand, 5962579 - 5962636
Alignment:
Q  215 gcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    ||||||||||| ||||  |||||||| | ||||||| ||||||||||||||| |||||    
T  5962579 gcttaattacatttttggtcctcgtgttatggtctattcacgaaactggtccggccct 5962636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 47; Significance: 7e-18; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 210 - 272
Target Start/End: Complemental strand, 29801965 - 29801903
Alignment:
Q  210 tttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    ||||||||||||||||||||| ||||||||  ||||| |||||||||||||||||||||||||    
T  29801965 tttaggcttaattacacttttgatcctcgtattttggcctactcacgaaactggtcctgccct 29801903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 212 - 272
Target Start/End: Complemental strand, 31779199 - 31779139
Alignment:
Q  212 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    |||||||||||||||||||  |||||||| ||||| |||||||||||||||||||||||||    
T  31779199 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccct 31779139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 208 - 272
Target Start/End: Complemental strand, 43973991 - 43973927
Alignment:
Q  208 attttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    |||||||||||||||||||||||  |||||||| ||||| ||||||||||||||||| |||||||    
T  43973991 attttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggttctgccct 43973927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 211 - 270
Target Start/End: Original strand, 20840557 - 20840616
Alignment:
Q  211 ttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcc 270  Q
    ||||||||||||||||||||  |||||||| ||||| |||||||||||||||||||||||    
T  20840557 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcc 20840616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 213 - 272
Target Start/End: Original strand, 31778652 - 31778711
Alignment:
Q  213 aggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    ||||||||||||||||||  |||||||| ||||||||||||| |||||||||||||||||    
T  31778652 aggcttaattacacttttggtcctcgtgttttggtctactcatgaaactggtcctgccct 31778711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 209 - 272
Target Start/End: Complemental strand, 32535513 - 32535450
Alignment:
Q  209 ttttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    |||| |||||||||||||||||  |||||||| ||||| |||||||||||||||||||||||||    
T  32535513 tttttggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccct 32535450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 214 - 272
Target Start/End: Complemental strand, 39556122 - 39556064
Alignment:
Q  214 ggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    |||||||||||||||||  |||||||| ||||| |||||||||||||||||||||||||    
T  39556122 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccct 39556064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 209 - 270
Target Start/End: Complemental strand, 24301106 - 24301045
Alignment:
Q  209 ttttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcc 270  Q
    ||||||||||||||||||||||  |||||||| ||||| |||||||||||| ||||||||||    
T  24301106 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcc 24301045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 213 - 270
Target Start/End: Original strand, 39555577 - 39555634
Alignment:
Q  213 aggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcc 270  Q
    ||||||||||||||||||  |||||||| ||||| |||||||||||||||||||||||    
T  39555577 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcc 39555634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 209 - 272
Target Start/End: Complemental strand, 26837905 - 26837842
Alignment:
Q  209 ttttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    ||||||||||||||||||||||  |||||||| ||||| ||||| ||||||||||| |||||||    
T  26837905 ttttaggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggttctgccct 26837842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 209 - 272
Target Start/End: Original strand, 30104477 - 30104540
Alignment:
Q  209 ttttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    ||||||||||||||||||||||  |||||||| ||||  |||||||||||| ||||||||||||    
T  30104477 ttttaggcttaattacacttttggtcctcgtgttttgacctactcacgaaattggtcctgccct 30104540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 212 - 265
Target Start/End: Complemental strand, 4275911 - 4275858
Alignment:
Q  212 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtc 265  Q
    |||||||||||||||||||  |||||||| ||||| ||||||||||||||||||    
T  4275911 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtc 4275858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 211 - 272
Target Start/End: Complemental strand, 5137529 - 5137468
Alignment:
Q  211 ttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    ||||||||||||||||||||  |||||||| ||||| ||||||| ||||||||| |||||||    
T  5137529 ttaggcttaattacacttttggtcctcgtgttttggcctactcatgaaactggttctgccct 5137468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 213 - 270
Target Start/End: Complemental strand, 20841107 - 20841050
Alignment:
Q  213 aggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcc 270  Q
    ||||||||||||||||||  | |||||| ||||| |||||||||||||||||||||||    
T  20841107 aggcttaattacacttttggtgctcgtgttttggcctactcacgaaactggtcctgcc 20841050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 216 - 265
Target Start/End: Complemental strand, 25853770 - 25853721
Alignment:
Q  216 cttaattacacttttaatcctcgtgatttggtctactcacgaaactggtc 265  Q
    ||||||||||||||| ||||||||| |||| |||||||||||||||||||    
T  25853770 cttaattacacttttgatcctcgtgttttgctctactcacgaaactggtc 25853721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 215 - 272
Target Start/End: Original strand, 51473429 - 51473486
Alignment:
Q  215 gcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    ||||||||||||||||  |||||||| ||||||||| |||||||| ||||||||||||    
T  51473429 gcttaattacacttttggtcctcgtgttttggtctattcacgaaattggtcctgccct 51473486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 209 - 269
Target Start/End: Complemental strand, 37727480 - 37727420
Alignment:
Q  209 ttttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgc 269  Q
    |||| |||||||||||||||||  ||||| || ||||| ||||||||||||||||||||||    
T  37727480 tttttggcttaattacacttttggtcctcatgttttggcctactcacgaaactggtcctgc 37727420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 213 - 272
Target Start/End: Original strand, 37726928 - 37726987
Alignment:
Q  213 aggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    ||||||||||||||||||  |||||||| |||||||| || ||||||||||| |||||||    
T  37726928 aggcttaattacacttttggtcctcgtgttttggtctgcttacgaaactggttctgccct 37726987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 211 - 270
Target Start/End: Original strand, 48452986 - 48453045
Alignment:
Q  211 ttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcc 270  Q
    |||||||| |||||||||||  || ||||| ||||| |||||||||||||||||||||||    
T  48452986 ttaggcttgattacacttttggtcatcgtgttttggcctactcacgaaactggtcctgcc 48453045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 272
Target Start/End: Original strand, 25853234 - 25853292
Alignment:
Q  214 ggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    |||||||||||||||||  |||||||| ||||| |||||||||||| ||||| ||||||    
T  25853234 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcatgccct 25853292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 211 - 272
Target Start/End: Original strand, 17464488 - 17464549
Alignment:
Q  211 ttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    ||||||||||||||||||||  |||||||| ||||| ||| || ||||||||||| ||||||    
T  17464488 ttaggcttaattacacttttggtcctcgtgttttggcctattcgcgaaactggtcatgccct 17464549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 213 - 270
Target Start/End: Original strand, 23644461 - 23644518
Alignment:
Q  213 aggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcc 270  Q
    ||||||||||||||||||  |||||||  ||||| |||||||||||| ||||||||||    
T  23644461 aggcttaattacacttttggtcctcgtattttggcctactcacgaaattggtcctgcc 23644518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 213 - 270
Target Start/End: Original strand, 27393660 - 27393717
Alignment:
Q  213 aggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcc 270  Q
    ||||||||||||||||||  |||||||| ||||  |||||||| ||||||||||||||    
T  27393660 aggcttaattacacttttggtcctcgtgttttgacctactcacaaaactggtcctgcc 27393717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 213 - 270
Target Start/End: Complemental strand, 27394123 - 27394066
Alignment:
Q  213 aggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcc 270  Q
    ||||||||||||||||||  |||||||| ||||| ||||||||||||  |||||||||    
T  27394123 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaataggtcctgcc 27394066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 209 - 272
Target Start/End: Complemental strand, 23645015 - 23644952
Alignment:
Q  209 ttttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    |||| |||||||||| ||||||  |||||||| ||||| |||||||||||| ||||||| ||||    
T  23645015 ttttcggcttaattatacttttggtcctcgtgttttggcctactcacgaaattggtcctaccct 23644952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 217 - 272
Target Start/End: Complemental strand, 25612519 - 25612464
Alignment:
Q  217 ttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    ||||||||||||||  |||||||| ||||  |||||||||||| ||||||||||||    
T  25612519 ttaattacacttttggtcctcgtgttttgacctactcacgaaattggtcctgccct 25612464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 217 - 272
Target Start/End: Original strand, 26274570 - 26274625
Alignment:
Q  217 ttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    ||||||||| |||| ||||| ||  ||||| |||||||||||||||||||||||||    
T  26274570 ttaattacatttttgatccttgtattttggactactcacgaaactggtcctgccct 26274625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 213 - 272
Target Start/End: Complemental strand, 30098309 - 30098250
Alignment:
Q  213 aggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    ||||||||||||||||||  |||||||| ||||   ||||||||||||||||| ||||||    
T  30098309 aggcttaattacacttttggtcctcgtgttttgacatactcacgaaactggtcttgccct 30098250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 214 - 272
Target Start/End: Original strand, 29801356 - 29801414
Alignment:
Q  214 ggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    |||||||||||||||||  || ||||| |||||  ||||||| ||||||||||||||||    
T  29801356 ggcttaattacacttttggtcatcgtgttttggcatactcacaaaactggtcctgccct 29801414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 270
Target Start/End: Complemental strand, 37222118 - 37222060
Alignment:
Q  212 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcc 270  Q
    |||||||||||||||||||  |||||||| ||||  |||||||| ||| ||||||||||    
T  37222118 taggcttaattacacttttggtcctcgtgttttgccctactcacaaaattggtcctgcc 37222060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 214 - 272
Target Start/End: Complemental strand, 50116954 - 50116896
Alignment:
Q  214 ggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    ||||||||||||||||| ||||||||| ||||   ||||||||||| ||||| ||||||    
T  50116954 ggcttaattacacttttgatcctcgtgttttgacttactcacgaaattggtcatgccct 50116896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 217 - 270
Target Start/End: Original strand, 32534962 - 32535015
Alignment:
Q  217 ttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcc 270  Q
    ||||||||||||||  |||||||| |||||  ||||||||||| ||||||||||    
T  32534962 ttaattacacttttggtcctcgtgttttggcatactcacgaaattggtcctgcc 32535015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 212 - 272
Target Start/End: Original strand, 5136978 - 5137038
Alignment:
Q  212 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    |||| ||||||||||||||  |||||||| ||||| | |||||||||| ||||| ||||||    
T  5136978 taggtttaattacacttttggtcctcgtgttttggccaactcacgaaattggtcatgccct 5137038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 46; Significance: 3e-17; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 203 - 272
Target Start/End: Original strand, 22434168 - 22434237
Alignment:
Q  203 attaaattttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    |||||||||| |||||||||||||||||  |||||||| |||||  ||||||||||||||||||||||||    
T  22434168 attaaatttttggcttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcctgccct 22434237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 211 - 272
Target Start/End: Complemental strand, 23494991 - 23494930
Alignment:
Q  211 ttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    ||||||||||||||||||||  |||||||| ||||| |||||||||||||||||||||||||    
T  23494991 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccct 23494930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 212 - 272
Target Start/End: Original strand, 15523233 - 15523293
Alignment:
Q  212 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    |||||||||||||||||||  |||||||| ||||| |||||||||||||||||||||||||    
T  15523233 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccct 15523293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 212 - 272
Target Start/End: Complemental strand, 51021342 - 51021282
Alignment:
Q  212 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    ||||||||||||||||||| ||||||||| ||||| |||||||||||| ||||||||||||    
T  51021342 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaattggtcctgccct 51021282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 209 - 270
Target Start/End: Complemental strand, 11153697 - 11153636
Alignment:
Q  209 ttttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcc 270  Q
    |||| |||||||||||||||||  |||||||| ||||| |||||||||||||||||||||||    
T  11153697 tttttggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcc 11153636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 212 - 272
Target Start/End: Complemental strand, 25447783 - 25447723
Alignment:
Q  212 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    |||||||||||||||||||  || ||||| ||||| |||||||||||||||||||||||||    
T  25447783 taggcttaattacacttttggtcttcgtgttttggcctactcacgaaactggtcctgccct 25447723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 208 - 272
Target Start/End: Original strand, 25937664 - 25937728
Alignment:
Q  208 attttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    |||||||||||||||||| ||||  |||||||| ||| | |||||||||||||||||||||||||    
T  25937664 attttaggcttaattacatttttggtcctcgtgttttagcctactcacgaaactggtcctgccct 25937728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 213 - 272
Target Start/End: Complemental strand, 15523780 - 15523721
Alignment:
Q  213 aggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    ||||||||||||||||||  || ||||| ||||| |||||||||||||||||||||||||    
T  15523780 aggcttaattacacttttggtcatcgtgttttgggctactcacgaaactggtcctgccct 15523721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 214 - 269
Target Start/End: Complemental strand, 35363146 - 35363091
Alignment:
Q  214 ggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgc 269  Q
    ||||||||||||||||| ||||||||| ||||| ||||||||||||||||| ||||    
T  35363146 ggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggttctgc 35363091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 210 - 272
Target Start/End: Complemental strand, 20958408 - 20958346
Alignment:
Q  210 tttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    |||| ||||||||||||||||| |||||||  ||||| |||||||||||| ||||||||||||    
T  20958408 tttacgcttaattacacttttagtcctcgtattttggcctactcacgaaaatggtcctgccct 20958346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 214 - 272
Target Start/End: Original strand, 25447247 - 25447305
Alignment:
Q  214 ggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    |||||||||||||||||  |||||||| ||||| ||||||| |||||||||||||||||    
T  25447247 ggcttaattacacttttggtcctcgtgttttggcctactcatgaaactggtcctgccct 25447305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 214 - 272
Target Start/End: Original strand, 46193405 - 46193463
Alignment:
Q  214 ggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    |||||||||||||||||  |||||||| ||||| |||||||||||| ||||||||||||    
T  46193405 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgccct 46193463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 208 - 269
Target Start/End: Complemental strand, 4220110 - 4220049
Alignment:
Q  208 attttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgc 269  Q
    |||||||| ||||||||||||||  |||||||| ||||| ||||||||||||||| ||||||    
T  4220110 attttaggtttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgc 4220049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 210 - 270
Target Start/End: Complemental strand, 22434725 - 22434665
Alignment:
Q  210 tttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcc 270  Q
    |||||| ||||||||| ||||  |||||||| ||||| |||||||||||||||||||||||    
T  22434725 tttaggtttaattacatttttggtcctcgtgttttggcctactcacgaaactggtcctgcc 22434665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 200 - 272
Target Start/End: Complemental strand, 25938230 - 25938158
Alignment:
Q  200 accattaaattttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    ||||||||| |  ||||||||||||||||||  |||| ||| ||||| |||||||||||| ||||||||||||    
T  25938230 accattaaaataaaggcttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgccct 25938158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 216 - 272
Target Start/End: Complemental strand, 46193948 - 46193892
Alignment:
Q  216 cttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    |||||||||||||||  |||||||| ||||| |||||||||||| ||||||||||||    
T  46193948 cttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgccct 46193892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 213 - 272
Target Start/End: Complemental strand, 16318322 - 16318263
Alignment:
Q  213 aggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    ||||||||||||||||||  |||||||| ||||| |||||||| |||||| |||||||||    
T  16318322 aggcttaattacacttttggtcctcgtgttttggcctactcacaaaactgatcctgccct 16318263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 217 - 272
Target Start/End: Complemental strand, 48526723 - 48526668
Alignment:
Q  217 ttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    ||||||| ||||||  |||||||| |||||||||||||||||||||||| ||||||    
T  48526723 ttaattatacttttggtcctcgtgttttggtctactcacgaaactggtcttgccct 48526668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 216 - 270
Target Start/End: Original strand, 4219559 - 4219613
Alignment:
Q  216 cttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcc 270  Q
    |||||||||| ||||  |||||||| ||||| |||||||||||||||||||||||    
T  4219559 cttaattacatttttggtcctcgtgttttggcctactcacgaaactggtcctgcc 4219613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 211 - 265
Target Start/End: Complemental strand, 18764068 - 18764014
Alignment:
Q  211 ttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtc 265  Q
    |||| |||||||||||||||  |||||||| ||||| ||||||||||||||||||    
T  18764068 ttagacttaattacacttttggtcctcgtgttttggcctactcacgaaactggtc 18764014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 211 - 265
Target Start/End: Complemental strand, 20471059 - 20471005
Alignment:
Q  211 ttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtc 265  Q
    ||||||||||||||||||||  |||||||| ||||| ||||| ||||||||||||    
T  20471059 ttaggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtc 20471005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 272
Target Start/End: Complemental strand, 45082969 - 45082911
Alignment:
Q  214 ggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    |||||||||||||||||  |||||||| |||||  ||||||||||||||||| ||||||    
T  45082969 ggcttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcatgccct 45082911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 211 - 272
Target Start/End: Original strand, 12234326 - 12234387
Alignment:
Q  211 ttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    ||||||||||||||||||||  ||||| || |||||  || |||||||||||||||||||||    
T  12234326 ttaggcttaattacacttttggtcctcttgttttggcttattcacgaaactggtcctgccct 12234387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 216 - 272
Target Start/End: Original strand, 2118295 - 2118351
Alignment:
Q  216 cttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    |||||||||||||||  |||| ||| ||||| |||||||||||| ||||||||||||    
T  2118295 cttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgccct 2118351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 216 - 272
Target Start/End: Original strand, 23494445 - 23494501
Alignment:
Q  216 cttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    |||||||||| ||||  |||||||| ||||| |||||||||||||| ||||||||||    
T  23494445 cttaattacatttttggtcctcgtgttttggcctactcacgaaactagtcctgccct 23494501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 272
Target Start/End: Complemental strand, 33110011 - 33109951
Alignment:
Q  212 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    |||||||||||||||||||  ||||| || ||||| || ||||||||| ||||||||||||    
T  33110011 taggcttaattacacttttggtcctcatgttttggcctgctcacgaaattggtcctgccct 33109951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 216 - 272
Target Start/End: Complemental strand, 38962362 - 38962306
Alignment:
Q  216 cttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    |||||||||| ||||  |||||||| ||||||||| ||||||||||||||| |||||    
T  38962362 cttaattacatttttggtcctcgtgttttggtctattcacgaaactggtccggccct 38962306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 272
Target Start/End: Complemental strand, 54995614 - 54995554
Alignment:
Q  212 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    |||| ||||||||||||||  |||||||| ||||| ||||||||||||||| || ||||||    
T  54995614 taggtttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgccct 54995554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 213 - 272
Target Start/End: Complemental strand, 10258433 - 10258374
Alignment:
Q  213 aggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    ||||||||||||||||||  |||||||| | ||| ||||||| |||| ||||||||||||    
T  10258433 aggcttaattacacttttggtcctcgtgttgtggcctactcaggaaattggtcctgccct 10258374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 209 - 272
Target Start/End: Original strand, 51020792 - 51020855
Alignment:
Q  209 ttttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    |||||||||||||||||||||| |||||| || |||||   | |||| ||||||||||||||||    
T  51020792 ttttaggcttaattacacttttgatcctcatgttttggctaattcactaaactggtcctgccct 51020855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 214 - 272
Target Start/End: Complemental strand, 12234874 - 12234816
Alignment:
Q  214 ggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    |||||||||| ||||||  |||||||| ||||| ||||||||||||||| || ||||||    
T  12234874 ggcttaattatacttttggtcctcgtgttttggcctactcacgaaactgatcatgccct 12234816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 216 - 269
Target Start/End: Original strand, 33109686 - 33109739
Alignment:
Q  216 cttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgc 269  Q
    |||||||||| ||||  |||||||| |||||  |||||||||||||||||||||    
T  33109686 cttaattacatttttggtcctcgtgttttggcatactcacgaaactggtcctgc 33109739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 214 - 270
Target Start/End: Complemental strand, 16691616 - 16691560
Alignment:
Q  214 ggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcc 270  Q
    ||||||||||||||||| ||||  ||| ||||  |||||||||||| ||||||||||    
T  16691616 ggcttaattacacttttgatccctgtgttttgacctactcacgaaaatggtcctgcc 16691560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 212 - 268
Target Start/End: Original strand, 48293592 - 48293648
Alignment:
Q  212 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctg 268  Q
    |||||||||||||||||||  |||||||| |||||  ||||||||||| || |||||    
T  48293592 taggcttaattacacttttggtcctcgtgttttggcttactcacgaaattgatcctg 48293648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 212 - 272
Target Start/End: Original strand, 54995067 - 54995127
Alignment:
Q  212 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    |||| ||||||||||||||  ||||||||  |||| |||||||||||||| ||||| ||||    
T  54995067 taggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctaccct 54995127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 45; Significance: 1e-16; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 208 - 272
Target Start/End: Original strand, 11656449 - 11656513
Alignment:
Q  208 attttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    |||||||||||||||||||||||  |||||||| ||||| |||||||||||||||||| ||||||    
T  11656449 attttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgccct 11656513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 209 - 269
Target Start/End: Complemental strand, 34541098 - 34541038
Alignment:
Q  209 ttttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgc 269  Q
    ||||||||||||||||||||||  |||||||| ||||| ||||||||||||||||||||||    
T  34541098 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgc 34541038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 212 - 272
Target Start/End: Original strand, 41681132 - 41681192
Alignment:
Q  212 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    |||||||||||||||||||  |||||||| ||||| |||||||||||||||||||||||||    
T  41681132 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccct 41681192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 205 - 272
Target Start/End: Original strand, 19176281 - 19176348
Alignment:
Q  205 taaattttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    ||||| ||||||||||||||||||||  |||||||| ||||| |||||||||||||| ||||||||||    
T  19176281 taaatattaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactagtcctgccct 19176348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 210 - 272
Target Start/End: Complemental strand, 19176839 - 19176777
Alignment:
Q  210 tttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    |||||||||||||||||||||  |||||||| ||||| ||||||||| |||||||||||||||    
T  19176839 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgtaactggtcctgccct 19176777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 217 - 272
Target Start/End: Original strand, 9928912 - 9928967
Alignment:
Q  217 ttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    ||||||||||||||  |||||||| |||| ||||||||||||||||||||||||||    
T  9928912 ttaattacacttttggtcctcgtgttttgatctactcacgaaactggtcctgccct 9928967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 213 - 272
Target Start/End: Complemental strand, 9930203 - 9930144
Alignment:
Q  213 aggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    ||||||||||||||||||  |||||||  ||||| |||||||||||||||||||||||||    
T  9930203 aggcttaattacacttttggtcctcgtattttggcctactcacgaaactggtcctgccct 9930144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 213 - 272
Target Start/End: Complemental strand, 13225185 - 13225126
Alignment:
Q  213 aggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    ||||||||||||||||||  |||||||| ||||| |||||||||||||||||| ||||||    
T  13225185 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgccct 13225126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 210 - 264
Target Start/End: Original strand, 12571859 - 12571913
Alignment:
Q  210 tttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggt 264  Q
    |||||||||||||||||||||  |||||||| ||||| |||||||||||||||||    
T  12571859 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggt 12571913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 210 - 272
Target Start/End: Original strand, 33742918 - 33742980
Alignment:
Q  210 tttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    |||||||||||||||||||||  |||||||| ||||  |||||||||||||||||| ||||||    
T  33742918 tttaggcttaattacacttttggtcctcgtgttttgacctactcacgaaactggtcttgccct 33742980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 213 - 266
Target Start/End: Complemental strand, 11657003 - 11656950
Alignment:
Q  213 aggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcc 266  Q
    ||||||||||||||||||  |||||||| ||||| |||||||||||||||||||    
T  11657003 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcc 11656950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 215 - 272
Target Start/End: Complemental strand, 31133764 - 31133707
Alignment:
Q  215 gcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    ||||||||||||||||  |||||||| ||||| ||||||||||||||| |||||||||    
T  31133764 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgccct 31133707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 212 - 272
Target Start/End: Original strand, 4629795 - 4629855
Alignment:
Q  212 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    ||||||||||| |||||||||| |||||| |||||  || |||||||||||||||||||||    
T  4629795 taggcttaattgcacttttaattctcgtgttttggcatattcacgaaactggtcctgccct 4629855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 208 - 272
Target Start/End: Complemental strand, 9178186 - 9178122
Alignment:
Q  208 attttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    ||||| |||||||||||||||||  |||||||| ||||| ||||||||||||||| || ||||||    
T  9178186 atttttggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgccct 9178122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 212 - 272
Target Start/End: Original strand, 31133218 - 31133278
Alignment:
Q  212 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    |||||||||||||||||||  |||||||| ||||  ||||||||||||||||||| |||||    
T  31133218 taggcttaattacacttttggtcctcgtgttttgccctactcacgaaactggtcccgccct 31133278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 213 - 272
Target Start/End: Original strand, 44831246 - 44831305
Alignment:
Q  213 aggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    ||||||||||||||||||  ||||| || ||||| |||||||||||| ||||||||||||    
T  44831246 aggcttaattacacttttggtcctcatgttttggcctactcacgaaattggtcctgccct 44831305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 272
Target Start/End: Complemental strand, 41681679 - 41681621
Alignment:
Q  214 ggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    |||||||||||||||||  |||||||| ||||| ||| |||||||||||||||| ||||    
T  41681679 ggcttaattacacttttggtcctcgtgttttggcctaatcacgaaactggtcctaccct 41681621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 211 - 269
Target Start/End: Complemental strand, 44831793 - 44831735
Alignment:
Q  211 ttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgc 269  Q
    ||||||||||| ||||||||  |||||||| |||||  |||||||||||||||||||||    
T  44831793 ttaggcttaataacacttttggtcctcgtgttttggcatactcacgaaactggtcctgc 44831735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 269
Target Start/End: Complemental strand, 4630328 - 4630276
Alignment:
Q  217 ttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgc 269  Q
    |||||||||||||| ||| ||||| ||||| |||||||||||| |||||||||    
T  4630328 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgc 4630276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 261
Target Start/End: Complemental strand, 12572393 - 12572349
Alignment:
Q  217 ttaattacacttttaatcctcgtgatttggtctactcacgaaact 261  Q
    ||||||||||||||  |||||||| ||||||||||||||||||||    
T  12572393 ttaattacacttttggtcctcgtgttttggtctactcacgaaact 12572349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 207 - 270
Target Start/End: Original strand, 10918119 - 10918182
Alignment:
Q  207 aattttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcc 270  Q
    ||||||||| ||||||||| ||||  |||||||| |||| ||||||||||||| ||||| ||||    
T  10918119 aattttaggtttaattacattttttgtcctcgtgttttgatctactcacgaaattggtcttgcc 10918182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 217 - 272
Target Start/End: Original strand, 33328161 - 33328216
Alignment:
Q  217 ttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    ||||||||||||||  |||||||| ||||| ||||||||||||||| || ||||||    
T  33328161 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgccct 33328216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 212 - 272
Target Start/End: Complemental strand, 11337069 - 11337009
Alignment:
Q  212 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    |||||||||||||||||||  || ||||| |||||  ||||||||||| |||||| |||||    
T  11337069 taggcttaattacacttttggtcttcgtgttttggcttactcacgaaattggtcccgccct 11337009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold1223
Description:

Target: scaffold1223; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 214 - 272
Target Start/End: Complemental strand, 1286 - 1228
Alignment:
Q  214 ggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    |||||||||||||||||| |||||||| |||||  ||||||||||||||||||||||||    
T  1286 ggcttaattacacttttagtcctcgtgttttggcttactcacgaaactggtcctgccct 1228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 216 - 272
Target Start/End: Original strand, 755 - 811
Alignment:
Q  216 cttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    |||||||||||||||  || ||||| ||||| |||||||||| ||||||||||||||    
T  755 cttaattacacttttggtcttcgtgttttggcctactcacgatactggtcctgccct 811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0951
Description:

Target: scaffold0951; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 211 - 272
Target Start/End: Complemental strand, 2215 - 2154
Alignment:
Q  211 ttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    ||||||||||||||||||||  |||||||| ||||| ||||| |||||||||||||||||||    
T  2215 ttaggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgccct 2154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 212 - 272
Target Start/End: Original strand, 1665 - 1725
Alignment:
Q  212 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    |||||||||||||||||||  ||||| || ||||| |||||||||||||||||||||||||    
T  1665 taggcttaattacacttttggtcctcctgttttggcctactcacgaaactggtcctgccct 1725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 211 - 272
Target Start/End: Original strand, 4790 - 4851
Alignment:
Q  211 ttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    ||||||||||||||||||||  |||||||| ||||| |||||||||||||||||| ||||||    
T  4790 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgccct 4851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 216 - 265
Target Start/End: Complemental strand, 5334 - 5285
Alignment:
Q  216 cttaattacacttttaatcctcgtgatttggtctactcacgaaactggtc 265  Q
    |||||||||||||||  |||||||| ||||| ||| ||||||||||||||    
T  5334 cttaattacacttttggtcctcgtgttttggcctagtcacgaaactggtc 5285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 208 - 272
Target Start/End: Complemental strand, 19172 - 19108
Alignment:
Q  208 attttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    ||||| |||||||||||||||||  |||||||| ||||| |||||||||||||| ||||||||||    
T  19172 atttttggcttaattacacttttggtcctcgtgttttggcctactcacgaaacttgtcctgccct 19108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 217 - 272
Target Start/End: Complemental strand, 62000 - 61945
Alignment:
Q  217 ttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    |||||||||||||| ||||||||| |||||||||||||||||| ||||||| ||||    
T  62000 ttaattacacttttgatcctcgtgttttggtctactcacgaaaatggtcctaccct 61945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 270
Target Start/End: Original strand, 61026 - 61084
Alignment:
Q  212 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcc 270  Q
    ||||||||| ||||||||| ||||||||| ||||| |||||||||||| || |||||||    
T  61026 taggcttaagtacacttttgatcctcgtgttttggcctactcacgaaaatgatcctgcc 61084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 214 - 272
Target Start/End: Complemental strand, 11168 - 11110
Alignment:
Q  214 ggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    |||||||||||||||||  |||||||| ||||| ||||| |||||||||||||||||||    
T  11168 ggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgccct 11110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 210 - 272
Target Start/End: Complemental strand, 134222 - 134160
Alignment:
Q  210 tttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    |||||||||||||||||||||  |||||||| ||||| |||||||||||||| ||| ||||||    
T  134222 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactagtcatgccct 134160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 212 - 272
Target Start/End: Complemental strand, 4754 - 4694
Alignment:
Q  212 taggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    |||||||||||||||||||  || ||||| |||||  ||||||||||||||||||||||||    
T  4754 taggcttaattacacttttggtcttcgtgttttggcatactcacgaaactggtcctgccct 4694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 217 - 264
Target Start/End: Complemental strand, 10414 - 10367
Alignment:
Q  217 ttaattacacttttaatcctcgtgatttggtctactcacgaaactggt 264  Q
    ||||||||||||||  |||||||| |||||||||||||||||||||||    
T  10414 ttaattacacttttggtcctcgtgttttggtctactcacgaaactggt 10367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1585 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold1585
Description:

Target: scaffold1585; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 215 - 272
Target Start/End: Original strand, 568 - 625
Alignment:
Q  215 gcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    |||||||||||||||| ||||||||| ||||| |||||||||||| || || ||||||    
T  568 gcttaattacacttttgatcctcgtgttttggcctactcacgaaaatgatcatgccct 625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 217 - 270
Target Start/End: Original strand, 42172 - 42225
Alignment:
Q  217 ttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgcc 270  Q
    ||||||||||||||| | |||||| ||||||||| ||||||||||| |||||||    
T  42172 ttaattacacttttagttctcgtgttttggtctaatcacgaaactgatcctgcc 42225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 210 - 272
Target Start/End: Complemental strand, 42707 - 42645
Alignment:
Q  210 tttaggcttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    |||||||||||||| ||||||   ||||||| ||||||||||||| ||||||| | |||||||    
T  42707 tttaggcttaattatacttttggncctcgtgttttggtctactcaggaaactgattctgccct 42645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 217 - 272
Target Start/End: Complemental strand, 64847 - 64792
Alignment:
Q  217 ttaattacacttttaatcctcgtgatttggtctactcacgaaactggtcctgccct 272  Q
    ||||||||||||||  |||||||| |||||  |||||||||||||||||| |||||    
T  64847 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcccgccct 64792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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