View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15962_low_157 (Length: 208)
Name: NF15962_low_157
Description: NF15962
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15962_low_157 |
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Alignment Details
Target: chr5 (Bit Score: 190; Significance: 1e-103; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 42697803 - 42697614
Alignment:
| Q |
1 |
ccctccaattagcatgtaatgcctaagtcacactcatgaaaattgaaatgcatacattattagtttacaatcaagaagttagtcgcggctaaaataagtg |
100 |
Q |
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| T |
42697803 |
ccctccaattagcatgtaatgcctaagtcacactcatgaaaattgaaatgcatacattattagtttacaatcaagaagttagtcgcggctaaaataagtg |
42697704 |
T |
|
| Q |
101 |
tttatgttattcaattagcaaaaataaaaacattgccaaccaattaatcttattcaaagtaacaacccaaccataaaattctgatatacg |
190 |
Q |
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| T |
42697703 |
tttatgttattcaattagcaaaaataaaaacattgccaaccaattaatcttattcaaagtaacaacccaaccataaaattctgatatacg |
42697614 |
T |
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