View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15962_low_18 (Length: 479)

Name: NF15962_low_18
Description: NF15962
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15962_low_18
NF15962_low_18
[»] chr5 (52 HSPs)
chr5 (18-470)||(18512154-18512624)
chr5 (339-457)||(18512671-18512788)
chr5 (338-454)||(11348493-11348609)
chr5 (338-454)||(8539534-8539650)
chr5 (340-457)||(30192428-30192545)
chr5 (340-457)||(35671018-35671135)
chr5 (340-454)||(13838444-13838558)
chr5 (345-457)||(35672030-35672142)
chr5 (345-457)||(41622109-41622221)
chr5 (340-422)||(3891454-3891536)
chr5 (378-447)||(35564207-35564276)
chr5 (340-443)||(3892460-3892560)
chr5 (340-457)||(35282420-35282536)
chr5 (332-454)||(42912098-42912218)
chr5 (340-422)||(5747-5829)
chr5 (380-445)||(204454-204520)
chr5 (341-422)||(14684-14765)
chr5 (374-443)||(30711214-30711283)
chr5 (343-435)||(13563625-13563717)
chr5 (343-447)||(38408490-38408594)
chr5 (399-457)||(35651351-35651409)
chr5 (339-457)||(40789226-40789344)
chr5 (346-447)||(38971649-38971750)
chr5 (343-444)||(41623071-41623172)
chr5 (340-426)||(20509571-20509657)
chr5 (342-405)||(20744015-20744078)
chr5 (378-433)||(40788784-40788839)
chr5 (340-398)||(7757320-7757378)
chr5 (340-398)||(7762264-7762322)
chr5 (378-427)||(8679529-8679578)
chr5 (315-360)||(13707482-13707527)
chr5 (311-360)||(18512617-18512666)
chr5 (374-443)||(27659889-27659958)
chr5 (343-447)||(5200379-5200483)
chr5 (374-422)||(8574652-8574700)
chr5 (315-359)||(13665476-13665520)
chr5 (382-454)||(34080134-34080206)
chr5 (340-399)||(38855731-38855791)
chr5 (340-392)||(43094596-43094648)
chr5 (341-396)||(42937189-42937244)
chr5 (339-422)||(8580498-8580582)
chr5 (340-422)||(13837694-13837777)
chr5 (340-396)||(19037490-19037547)
chr5 (315-360)||(29430081-29430126)
chr5 (344-396)||(30708899-30708952)
chr5 (379-447)||(5196990-5197058)
chr5 (378-422)||(8680301-8680345)
chr5 (374-422)||(11027065-11027113)
chr5 (340-392)||(11346008-11346060)
chr5 (340-399)||(28880315-28880375)
chr5 (382-454)||(35281778-35281850)
chr5 (374-422)||(38853449-38853497)
[»] chr8 (80 HSPs)
chr8 (18-360)||(12206783-12207125)
chr8 (18-360)||(12451211-12451553)
chr8 (25-359)||(28694138-28694483)
chr8 (340-457)||(28694014-28694131)
chr8 (340-447)||(39277481-39277588)
chr8 (340-457)||(12206660-12206777)
chr8 (340-457)||(12451088-12451205)
chr8 (351-457)||(12207236-12207342)
chr8 (351-457)||(12451664-12451770)
chr8 (345-457)||(34891946-34892058)
chr8 (342-444)||(36345927-36346029)
chr8 (340-422)||(44933830-44933912)
chr8 (340-422)||(2335168-2335250)
chr8 (340-454)||(41016353-41016467)
chr8 (344-409)||(12207173-12207238)
chr8 (344-409)||(12451601-12451666)
chr8 (340-457)||(13782171-13782288)
chr8 (342-447)||(39513209-39513314)
chr8 (340-457)||(40740842-40740959)
chr8 (340-444)||(43520796-43520900)
chr8 (340-422)||(27502588-27502667)
chr8 (342-457)||(38134134-38134249)
chr8 (340-422)||(5533045-5533127)
chr8 (340-422)||(28617539-28617621)
chr8 (332-422)||(32585004-32585092)
chr8 (351-447)||(39831102-39831198)
chr8 (342-421)||(3085513-3085592)
chr8 (342-457)||(16939316-16939431)
chr8 (339-434)||(16940295-16940390)
chr8 (340-454)||(7120839-7120953)
chr8 (340-422)||(22550885-22550967)
chr8 (340-422)||(27501571-27501653)
chr8 (340-422)||(32584023-32584105)
chr8 (400-457)||(37651752-37651809)
chr8 (340-417)||(38604268-38604345)
chr8 (340-424)||(7121806-7121890)
chr8 (340-433)||(3695330-3695420)
chr8 (340-422)||(38603284-38603363)
chr8 (336-431)||(39583309-39583404)
chr8 (340-443)||(15030833-15030937)
chr8 (340-454)||(31745121-31745235)
chr8 (339-457)||(36127308-36127426)
chr8 (340-422)||(43363280-43363362)
chr8 (340-422)||(44841894-44841976)
chr8 (340-443)||(45066381-45066485)
chr8 (332-454)||(34798822-34798942)
chr8 (343-447)||(20859627-20859731)
chr8 (340-436)||(36595966-36596062)
chr8 (400-447)||(6013849-6013896)
chr8 (410-457)||(6013901-6013948)
chr8 (340-435)||(13783128-13783223)
chr8 (378-433)||(36344966-36345021)
chr8 (344-447)||(40075078-40075181)
chr8 (340-398)||(34366906-34366964)
chr8 (340-393)||(30755692-30755745)
chr8 (340-397)||(39601700-39601757)
chr8 (378-447)||(41858471-41858540)
chr8 (340-452)||(38330458-38330569)
chr8 (340-396)||(42602457-42602513)
chr8 (382-422)||(43362294-43362334)
chr8 (340-422)||(28618459-28618538)
chr8 (379-422)||(31184564-31184607)
chr8 (379-422)||(31185504-31185547)
chr8 (340-447)||(41471039-41471146)
chr8 (340-405)||(10749694-10749759)
chr8 (343-405)||(22547457-22547519)
chr8 (378-444)||(41472072-41472138)
chr8 (341-434)||(44934508-44934598)
chr8 (351-428)||(20854582-20854659)
chr8 (340-422)||(22014455-22014538)
chr8 (332-433)||(22960608-22960708)
chr8 (378-447)||(37328862-37328931)
chr8 (378-422)||(5532432-5532476)
chr8 (309-360)||(12207116-12207165)
chr8 (309-360)||(12451544-12451593)
chr8 (374-422)||(22510518-22510566)
chr8 (378-426)||(40745339-40745387)
chr8 (340-400)||(41855361-41855421)
chr8 (342-398)||(41858143-41858199)
chr8 (340-396)||(44727525-44727580)
[»] chr4 (80 HSPs)
chr4 (340-447)||(20208456-20208563)
chr4 (340-447)||(18884524-18884631)
chr4 (340-443)||(21022908-21023011)
chr4 (340-442)||(48807406-48807508)
chr4 (340-443)||(46253436-46253536)
chr4 (340-422)||(14201550-14201629)
chr4 (340-443)||(51037488-51037591)
chr4 (341-447)||(40061182-40061288)
chr4 (340-422)||(40833630-40833712)
chr4 (343-454)||(28084013-28084122)
chr4 (341-422)||(31242186-31242268)
chr4 (339-443)||(26792263-26792368)
chr4 (374-457)||(40061037-40061120)
chr4 (340-447)||(52469063-52469170)
chr4 (342-424)||(37296207-37296289)
chr4 (340-457)||(27872315-27872432)
chr4 (340-417)||(50446984-50447061)
chr4 (340-420)||(38369202-38369282)
chr4 (379-454)||(29306499-29306574)
chr4 (378-457)||(43175670-43175749)
chr4 (340-422)||(14200532-14200614)
chr4 (339-457)||(48806421-48806539)
chr4 (373-438)||(18411202-18411267)
chr4 (340-457)||(43176648-43176765)
chr4 (379-443)||(29307521-29307585)
chr4 (340-422)||(23221690-23221769)
chr4 (340-433)||(35631126-35631216)
chr4 (340-422)||(40832617-40832696)
chr4 (340-422)||(55587329-55587408)
chr4 (340-422)||(55588307-55588386)
chr4 (340-398)||(16984181-16984239)
chr4 (340-422)||(23220649-23220731)
chr4 (342-428)||(37855824-37855910)
chr4 (338-435)||(3403805-3403902)
chr4 (341-394)||(44674163-44674216)
chr4 (340-443)||(3408260-3408364)
chr4 (340-428)||(4783611-4783699)
chr4 (342-422)||(7485683-7485763)
chr4 (344-420)||(21015712-21015788)
chr4 (332-433)||(40962914-40963013)
chr4 (340-400)||(49889676-49889736)
chr4 (353-457)||(50023580-50023684)
chr4 (353-457)||(50030698-50030802)
chr4 (384-447)||(18411144-18411207)
chr4 (340-422)||(28235581-28235663)
chr4 (378-433)||(28322175-28322230)
chr4 (340-443)||(51036453-51036556)
chr4 (377-447)||(37295209-37295279)
chr4 (351-457)||(50020053-50020159)
chr4 (386-447)||(2449674-2449735)
chr4 (340-457)||(11565802-11565919)
chr4 (339-396)||(28081455-28081512)
chr4 (343-428)||(51429326-51429411)
chr4 (340-396)||(55793916-55793973)
chr4 (343-447)||(8111438-8111542)
chr4 (378-454)||(9013927-9014003)
chr4 (351-447)||(30703964-30704060)
chr4 (340-443)||(38368181-38368281)
chr4 (340-422)||(16473700-16473782)
chr4 (378-433)||(28157541-28157596)
chr4 (378-433)||(33812880-33812935)
chr4 (340-439)||(46254468-46254567)
chr4 (340-370)||(958614-958644)
chr4 (378-424)||(9655964-9656010)
chr4 (340-398)||(16983517-16983575)
chr4 (340-443)||(26932533-26932637)
chr4 (412-454)||(55407873-55407915)
chr4 (374-443)||(1309169-1309238)
chr4 (340-396)||(6178130-6178187)
chr4 (379-435)||(15999858-15999915)
chr4 (340-427)||(21343397-21343481)
chr4 (343-396)||(40354599-40354652)
chr4 (340-396)||(41795376-41795433)
chr4 (340-396)||(49094080-49094137)
chr4 (374-447)||(50196964-50197037)
chr4 (342-370)||(2448999-2449027)
chr4 (374-422)||(6181846-6181894)
chr4 (378-422)||(7484701-7484745)
chr4 (340-444)||(37856764-37856868)
chr4 (374-422)||(49090417-49090465)
[»] chr1 (69 HSPs)
chr1 (338-454)||(49429153-49429269)
chr1 (315-454)||(50036786-50036925)
chr1 (340-457)||(13761064-13761181)
chr1 (332-428)||(19915330-19915423)
chr1 (345-440)||(42290249-42290344)
chr1 (340-422)||(19914437-19914519)
chr1 (340-447)||(47653727-47653831)
chr1 (344-447)||(4208342-4208445)
chr1 (342-445)||(7942922-7943025)
chr1 (340-443)||(19161842-19161945)
chr1 (340-454)||(49660765-49660876)
chr1 (340-422)||(586625-586707)
chr1 (340-422)||(30194392-30194474)
chr1 (346-436)||(48228328-48228418)
chr1 (340-443)||(4883183-4883286)
chr1 (342-457)||(5329059-5329174)
chr1 (342-457)||(12627175-12627290)
chr1 (340-398)||(29765549-29765607)
chr1 (340-457)||(5330034-5330150)
chr1 (332-454)||(51461864-51461984)
chr1 (340-447)||(21700866-21700970)
chr1 (340-428)||(29424345-29424433)
chr1 (340-422)||(30195407-30195486)
chr1 (340-454)||(44470031-44470145)
chr1 (338-435)||(41453796-41453893)
chr1 (346-447)||(50343994-50344095)
chr1 (378-454)||(26769105-26769181)
chr1 (340-428)||(29425356-29425444)
chr1 (315-371)||(36183918-36183973)
chr1 (332-433)||(45780920-45781019)
chr1 (378-426)||(49502071-49502119)
chr1 (343-398)||(2425708-2425763)
chr1 (379-422)||(43011798-43011841)
chr1 (379-422)||(47652698-47652741)
chr1 (332-422)||(49661744-49661835)
chr1 (389-444)||(51461094-51461149)
chr1 (378-428)||(13149069-13149119)
chr1 (351-453)||(47505916-47506018)
chr1 (340-398)||(51271611-51271669)
chr1 (340-396)||(13636142-13636199)
chr1 (344-460)||(36184309-36184426)
chr1 (339-424)||(41909724-41909809)
chr1 (340-443)||(585604-585704)
chr1 (353-427)||(12628163-12628236)
chr1 (340-447)||(18609040-18609144)
chr1 (349-397)||(44596857-44596905)
chr1 (380-428)||(50683194-50683242)
chr1 (340-422)||(22524097-22524179)
chr1 (340-433)||(28456741-28456831)
chr1 (379-454)||(35255356-35255431)
chr1 (378-433)||(45780193-45780248)
chr1 (402-457)||(48455431-48455486)
chr1 (343-422)||(22397790-22397870)
chr1 (340-370)||(26633550-26633580)
chr1 (381-435)||(29356733-29356787)
chr1 (340-398)||(46886407-46886465)
chr1 (378-428)||(46909633-46909683)
chr1 (374-443)||(13629353-13629422)
chr1 (340-396)||(19159619-19159676)
chr1 (374-447)||(21140971-21141044)
chr1 (377-418)||(38632466-38632507)
chr1 (340-396)||(94406-94462)
chr1 (340-447)||(1167507-1167615)
chr1 (374-422)||(2365205-2365253)
chr1 (374-422)||(19924725-19924773)
chr1 (379-459)||(26606732-26606812)
chr1 (344-400)||(36908571-36908627)
chr1 (340-444)||(41459231-41459335)
chr1 (340-396)||(46217338-46217394)
[»] chr2 (65 HSPs)
chr2 (342-458)||(14002454-14002570)
chr2 (340-447)||(33222562-33222669)
chr2 (340-442)||(40156350-40156452)
chr2 (342-457)||(37322133-37322247)
chr2 (374-443)||(3085986-3086055)
chr2 (340-454)||(30801982-30802093)
chr2 (340-443)||(30803038-30803141)
chr2 (340-422)||(36510876-36510958)
chr2 (374-443)||(29074057-29074126)
chr2 (340-457)||(29407907-29408024)
chr2 (340-443)||(10424789-10424892)
chr2 (340-443)||(28477087-28477190)
chr2 (351-450)||(36652849-36652948)
chr2 (378-447)||(4286040-4286109)
chr2 (340-429)||(10425839-10425928)
chr2 (340-457)||(12252502-12252619)
chr2 (374-435)||(29947725-29947786)
chr2 (376-433)||(39185989-39186046)
chr2 (378-447)||(40220585-40220654)
chr2 (341-443)||(43619163-43619266)
chr2 (341-454)||(43976791-43976904)
chr2 (340-444)||(29406921-29407025)
chr2 (340-423)||(28138550-28138633)
chr2 (377-443)||(39951207-39951273)
chr2 (340-454)||(40221150-40221264)
chr2 (340-444)||(2271757-2271862)
chr2 (340-447)||(28420237-28420341)
chr2 (340-447)||(4286721-4286828)
chr2 (340-433)||(12252082-12252172)
chr2 (315-370)||(19694261-19694316)
chr2 (340-447)||(26544009-26544116)
chr2 (340-402)||(3943212-3943274)
chr2 (340-398)||(7189971-7190029)
chr2 (340-443)||(21998163-21998267)
chr2 (340-443)||(22003421-22003525)
chr2 (345-427)||(29401630-29401712)
chr2 (340-422)||(39489154-39489236)
chr2 (158-234)||(3920092-3920168)
chr2 (340-396)||(23346777-23346833)
chr2 (340-447)||(29948785-29948889)
chr2 (374-454)||(33416068-33416148)
chr2 (378-454)||(43313417-43313493)
chr2 (340-454)||(3086086-3086197)
chr2 (342-445)||(6232613-6232716)
chr2 (340-433)||(33001947-33002037)
chr2 (340-434)||(39033541-39033632)
chr2 (340-422)||(39489986-39490065)
chr2 (341-454)||(3803564-3803678)
chr2 (340-457)||(28139576-28139694)
chr2 (340-428)||(2983364-2983453)
chr2 (340-396)||(17424128-17424185)
chr2 (374-443)||(20937847-20937916)
chr2 (341-398)||(24607589-24607646)
chr2 (377-422)||(39033069-39033114)
chr2 (340-396)||(23347348-23347404)
chr2 (340-396)||(43258753-43258809)
chr2 (344-447)||(6637480-6637583)
chr2 (341-396)||(43257747-43257802)
chr2 (383-457)||(16544679-16544753)
chr2 (340-405)||(41273268-41273333)
chr2 (382-447)||(37294287-37294352)
chr2 (374-422)||(3940784-3940832)
chr2 (374-422)||(30497004-30497052)
chr2 (340-396)||(43870141-43870197)
chr2 (374-422)||(43978506-43978554)
[»] chr7 (58 HSPs)
chr7 (340-457)||(14102368-14102485)
chr7 (340-457)||(14412385-14412502)
chr7 (346-457)||(38555026-38555137)
chr7 (340-457)||(30846815-30846932)
chr7 (379-447)||(34139728-34139796)
chr7 (340-443)||(10524377-10524480)
chr7 (342-457)||(14101384-14101499)
chr7 (342-457)||(14411401-14411516)
chr7 (374-443)||(13921318-13921387)
chr7 (343-447)||(19804512-19804616)
chr7 (340-422)||(42794167-42794246)
chr7 (340-422)||(7040-7122)
chr7 (340-422)||(17840910-17840992)
chr7 (340-454)||(19072376-19072490)
chr7 (341-443)||(27656988-27657090)
chr7 (340-420)||(12210610-12210690)
chr7 (340-443)||(49140606-49140706)
chr7 (340-435)||(12027298-12027392)
chr7 (340-422)||(46907510-46907589)
chr7 (340-422)||(49141641-49141720)
chr7 (378-447)||(7974885-7974954)
chr7 (338-422)||(45258022-45258106)
chr7 (340-447)||(11885905-11886012)
chr7 (340-454)||(28563600-28563711)
chr7 (340-422)||(42582086-42582165)
chr7 (340-422)||(8067-8149)
chr7 (340-433)||(29112336-29112426)
chr7 (340-442)||(38555433-38555535)
chr7 (374-447)||(47521363-47521436)
chr7 (340-428)||(13645362-13645450)
chr7 (332-443)||(18109786-18109898)
chr7 (340-457)||(13644357-13644474)
chr7 (384-454)||(31512272-31512342)
chr7 (340-422)||(42583080-42583162)
chr7 (374-443)||(38083757-38083826)
chr7 (343-447)||(5541566-5541670)
chr7 (373-457)||(47751237-47751321)
chr7 (340-422)||(17834458-17834540)
chr7 (342-457)||(30845887-30846002)
chr7 (332-422)||(46908484-46908575)
chr7 (340-397)||(46738798-46738855)
chr7 (340-444)||(11886904-11887008)
chr7 (378-454)||(38084805-38084881)
chr7 (340-443)||(40928947-40929051)
chr7 (339-447)||(48590358-48590466)
chr7 (340-433)||(29097160-29097250)
chr7 (340-447)||(31324826-31324932)
chr7 (379-422)||(42795139-42795182)
chr7 (340-443)||(7975629-7975733)
chr7 (378-416)||(38266159-38266197)
chr7 (340-396)||(9367744-9367801)
chr7 (340-422)||(10098137-10098220)
chr7 (378-447)||(27658031-27658100)
chr7 (315-360)||(27919092-27919137)
chr7 (340-369)||(36186493-36186522)
chr7 (340-396)||(17838647-17838703)
chr7 (378-430)||(38265411-38265463)
chr7 (340-435)||(40140696-40140792)
[»] chr3 (83 HSPs)
chr3 (340-422)||(50998700-50998782)
chr3 (340-444)||(14043918-14044022)
chr3 (341-428)||(24703436-24703523)
chr3 (340-457)||(11270304-11270421)
chr3 (340-457)||(32592153-32592270)
chr3 (343-454)||(16861068-16861179)
chr3 (340-454)||(2062325-2062439)
chr3 (373-443)||(4330742-4330812)
chr3 (338-443)||(4002690-4002795)
chr3 (341-433)||(24700681-24700773)
chr3 (340-457)||(45075286-45075399)
chr3 (381-457)||(51755606-51755682)
chr3 (340-443)||(19988409-19988512)
chr3 (342-457)||(32743143-32743258)
chr3 (340-443)||(34543156-34543259)
chr3 (340-422)||(12897795-12897877)
chr3 (340-454)||(19842443-19842557)
chr3 (340-422)||(27739587-27739669)
chr3 (340-422)||(28817021-28817103)
chr3 (342-444)||(50330561-50330663)
chr3 (340-457)||(7941046-7941163)
chr3 (340-420)||(11248530-11248607)
chr3 (340-444)||(6143620-6143724)
chr3 (340-447)||(1294097-1294204)
chr3 (340-447)||(10658769-10658876)
chr3 (340-422)||(11095107-11095186)
chr3 (381-447)||(26494557-26494623)
chr3 (374-443)||(3493538-3493607)
chr3 (374-443)||(3497232-3497301)
chr3 (340-447)||(10492893-10492997)
chr3 (340-443)||(16851076-16851176)
chr3 (381-457)||(20485597-20485673)
chr3 (343-447)||(49265734-49265838)
chr3 (341-400)||(596777-596836)
chr3 (340-435)||(13743251-13743346)
chr3 (340-422)||(26245306-26245385)
chr3 (340-422)||(2267001-2267083)
chr3 (340-422)||(11249544-11249626)
chr3 (340-398)||(55385132-55385190)
chr3 (339-418)||(7942025-7942103)
chr3 (343-447)||(55207686-55207791)
chr3 (340-435)||(2743355-2743451)
chr3 (343-447)||(17561705-17561809)
chr3 (340-422)||(12898710-12898789)
chr3 (340-422)||(27738579-27738658)
chr3 (378-433)||(31977619-31977674)
chr3 (340-433)||(32744172-32744262)
chr3 (340-398)||(43476186-43476245)
chr3 (378-433)||(52514251-52514306)
chr3 (384-447)||(52515052-52515115)
chr3 (378-428)||(4274051-4274101)
chr3 (340-398)||(43478850-43478908)
chr3 (340-422)||(2645426-2645509)
chr3 (340-396)||(2647719-2647776)
chr3 (340-396)||(8475823-8475879)
chr3 (341-398)||(16647168-16647225)
chr3 (340-428)||(34712197-34712286)
chr3 (340-397)||(41802994-41803051)
chr3 (340-457)||(45076270-45076387)
chr3 (340-428)||(4274970-4275058)
chr3 (340-447)||(34648224-34648331)
chr3 (340-422)||(4015149-4015231)
chr3 (340-435)||(13747738-13747833)
chr3 (340-454)||(34712779-34712894)
chr3 (340-398)||(600564-600622)
chr3 (340-418)||(10492002-10492080)
chr3 (340-398)||(48246407-48246465)
chr3 (340-396)||(4331840-4331896)
chr3 (379-435)||(9429908-9429965)
chr3 (374-443)||(16444557-16444626)
chr3 (344-409)||(19750026-19750091)
chr3 (382-419)||(19750075-19750112)
chr3 (340-396)||(34049076-34049133)
chr3 (340-396)||(42166430-42166486)
chr3 (340-396)||(54389791-54389848)
chr3 (344-396)||(2271337-2271389)
chr3 (340-396)||(4004823-4004879)
chr3 (346-418)||(16611075-16611147)
chr3 (346-418)||(22048106-22048178)
chr3 (374-422)||(34045378-34045426)
chr3 (340-447)||(34542102-34542206)
chr3 (379-447)||(34645508-34645576)
chr3 (374-422)||(46388928-46388976)
[»] scaffold0092 (1 HSPs)
scaffold0092 (340-457)||(54501-54618)
[»] scaffold0176 (1 HSPs)
scaffold0176 (379-447)||(653-721)
[»] chr6 (35 HSPs)
chr6 (379-457)||(35096607-35096685)
chr6 (340-444)||(15888820-15888923)
chr6 (340-422)||(2109488-2109570)
chr6 (340-422)||(25554676-25554758)
chr6 (340-422)||(26349946-26350027)
chr6 (340-443)||(13164280-13164380)
chr6 (340-443)||(6760892-6760995)
chr6 (340-447)||(14124738-14124845)
chr6 (340-444)||(28249833-28249938)
chr6 (378-454)||(456099-456175)
chr6 (340-444)||(9049104-9049208)
chr6 (332-426)||(117228-117320)
chr6 (340-405)||(9048063-9048128)
chr6 (374-443)||(32691100-32691169)
chr6 (339-457)||(17596876-17596995)
chr6 (340-396)||(22305104-22305161)
chr6 (374-422)||(8707952-8708000)
chr6 (379-422)||(13158406-13158449)
chr6 (379-422)||(13163262-13163305)
chr6 (378-433)||(14834667-14834722)
chr6 (378-433)||(15545690-15545745)
chr6 (340-443)||(13382578-13382682)
chr6 (340-369)||(2051052-2051081)
chr6 (340-396)||(6204823-6204880)
chr6 (340-396)||(11691790-11691847)
chr6 (340-393)||(14012395-14012448)
chr6 (340-422)||(17597544-17597627)
chr6 (340-369)||(29286253-29286282)
chr6 (346-447)||(32034392-32034493)
chr6 (419-447)||(3178149-3178177)
chr6 (340-396)||(29076343-29076399)
chr6 (340-396)||(29109876-29109932)
chr6 (340-396)||(29111316-29111372)
chr6 (340-400)||(31151058-31151118)
chr6 (340-396)||(32223533-32223589)
[»] scaffold0188 (1 HSPs)
scaffold0188 (351-447)||(27947-28043)
[»] scaffold0199 (2 HSPs)
scaffold0199 (344-443)||(10602-10701)
scaffold0199 (340-396)||(12408-12464)
[»] scaffold0038 (1 HSPs)
scaffold0038 (340-444)||(49995-50100)
[»] scaffold0065 (2 HSPs)
scaffold0065 (340-457)||(65253-65371)
scaffold0065 (340-434)||(65423-65514)
[»] scaffold0016 (1 HSPs)
scaffold0016 (340-422)||(69241-69323)
[»] scaffold0217 (1 HSPs)
scaffold0217 (402-457)||(8738-8793)
[»] scaffold0019 (2 HSPs)
scaffold0019 (340-422)||(134334-134413)
scaffold0019 (340-427)||(127467-127554)
[»] scaffold0513 (1 HSPs)
scaffold0513 (381-435)||(8157-8211)
[»] scaffold0494 (2 HSPs)
scaffold0494 (374-443)||(11508-11577)
scaffold0494 (340-399)||(5324-5384)
[»] scaffold0180 (1 HSPs)
scaffold0180 (340-443)||(15642-15745)
[»] scaffold0101 (1 HSPs)
scaffold0101 (340-396)||(36554-36611)
[»] scaffold0219 (1 HSPs)
scaffold0219 (342-370)||(15726-15754)
[»] scaffold0192 (1 HSPs)
scaffold0192 (344-428)||(18923-19007)


Alignment Details
Target: chr5 (Bit Score: 310; Significance: 1e-174; HSPs: 52)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 310; E-Value: 1e-174
Query Start/End: Original strand, 18 - 470
Target Start/End: Complemental strand, 18512624 - 18512154
Alignment:
Q  18 atcaatgggtacagtttcaatgcattccaagccaaaaattataatacgctatgtcgattacggggaacttgttgaacaagttctataagacaaatcaaag 117  Q
    |||||||| ||||||| |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18512624 atcaatggttacagttccaatgcattcaaaggcaaaaattataatacgctatgtcgattacggggaacttgttgaacaagttctataagacaaatcaaag 18512525  T
Q  118 gcaaaatcatcactaaagaatcactnnnnnnnctcatgtcttcaatgatttgtgaattatgcagcgatatccataatgaatcaaaatcgaatttaattca 217  Q
    |||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  18512524 gcaaaatcatcactaaagaatcactaaaaaaactcatgtcttcaatgatttgtgaattatgcagcaatatccataatgaatcgaaatcgaatttaattca 18512425  T
Q  218 atccattgatgatgatgatgtaaccactgttacactaggaattggaaatgaaagagaactggaaccgaaatgtgcagattcttgataatgaacccattga 317  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18512424 atccattgatgatgatgatgtaaccactgttacactaggaattggaaataaaagagaactggaaccgaaatgtgcagattcttgataatgaacccattga 18512325  T
Q  318 tgatgat-aattttgagttttc-----------------attttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgagga 399  Q
    ||||||| | |||| | |||||                 |  || ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||    
T  18512324 tgatgatgagttttcatttttctcggtagttaactgccgaagtttctcggcagttaactgcagccggttttactaaacttcggcagttaactgccgatga 18512225  T
Q  400 gcatttgagtaatttactcgtgtttctcaaccaaactaaatgtgtcaatagcaatacttttactgtttcat 470  Q
    |||||||| |||||||||||||||||| | |||||||||||||||||||||||||||| ||||||||||||    
T  18512224 gcatttgaataatttactcgtgtttctaagccaaactaaatgtgtcaatagcaatactcttactgtttcat 18512154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 339 - 457
Target Start/End: Original strand, 18512671 - 18512788
Alignment:
Q  339 attttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaa 438  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| |||||||||    
T  18512671 attttcctcggcagttaactgcagccggttttactaaacttcggcagttaactgccgaagagcattt-agtaatttactcgtgtttctcagccaaactaa 18512769  T
Q  439 atgtgtcaatagcaatact 457  Q
    ||||||||| |||||||||    
T  18512770 atgtgtcaacagcaatact 18512788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 338 - 454
Target Start/End: Original strand, 11348493 - 11348609
Alignment:
Q  338 cattttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaacta 437  Q
    |||||||||||||||||||||||| |||| |||   |||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||     
T  11348493 cattttcctcggcagttaactgcatccggatttctaaaacttcggcagttaactgccgaggaacatttgagtaatttactcgtgtttctcagccaaactc 11348592  T
Q  438 aatgtgtcaatagcaat 454  Q
    |||||||||| ||||||    
T  11348593 aatgtgtcaacagcaat 11348609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 338 - 454
Target Start/End: Original strand, 8539534 - 8539650
Alignment:
Q  338 cattttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaacta 437  Q
    |||||||||||||||||||||||| |||| |||   ||||||||||||||||||||||||| | |||||||||||||||| |||||||||| |||||||     
T  8539534 cattttcctcggcagttaactgcagccggatttctaaaacttcggcagttaactgccgaggggtatttgagtaatttacttgtgtttctcagccaaactc 8539633  T
Q  438 aatgtgtcaatagcaat 454  Q
    |||||||||| ||||||    
T  8539634 aatgtgtcaacagcaat 8539650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 340 - 457
Target Start/End: Complemental strand, 30192545 - 30192428
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaa 439  Q
    ||||||||| |||||||||||| |||||| |   ||| ||||||||||||||||||| | |||||||||||||||||||||||||||||  ||||  |||    
T  30192545 ttttcctcgacagttaactgcagccggttctttaaaatttcggcagttaactgccgaagggcatttgagtaatttactcgtgtttctcagtcaaatcaaa 30192446  T
Q  440 tgtgtcaatagcaatact 457  Q
    |||||||| |||||||||    
T  30192445 tgtgtcaacagcaatact 30192428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 340 - 457
Target Start/End: Complemental strand, 35671135 - 35671018
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaa 439  Q
    |||||||||||||||||||||| |||||| |   ||| |||| ||||||| ||||||||| ||||| ||||||||||||||||||||||| ||||  |||    
T  35671135 ttttcctcggcagttaactgcagccggttctttaaaatttcgacagttaattgccgaggaacatttaagtaatttactcgtgtttctcaatcaaatcaaa 35671036  T
Q  440 tgtgtcaatagcaatact 457  Q
    |||||||| | |||||||    
T  35671035 tgtgtcaacaacaatact 35671018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 340 - 454
Target Start/End: Original strand, 13838444 - 13838558
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaa 439  Q
    |||||||||| ||||||||||| |||||||    | | ||||||||||||||||||||| | ||||| ||||||||||||||||||||| |||||| | |    
T  13838444 ttttcctcggtagttaactgcagccggtttcttcagaattcggcagttaactgccgaggggtatttgggtaatttactcgtgtttctcagccaaacaaca 13838543  T
Q  440 tgtgtcaatagcaat 454  Q
    |||||||| ||||||    
T  13838544 tgtgtcaacagcaat 13838558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 345 - 457
Target Start/End: Original strand, 35672030 - 35672142
Alignment:
Q  345 ctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaatgtgt 444  Q
    ||||||| |||||||||| || || | | |||||||||||||||||||||||||  |||||||||||||||||| ||||||||| |||||  |||| |||    
T  35672030 ctcggcacttaactgcaatcgattcttcaaaacttcggcagttaactgccgagggacatttgagtaatttactcatgtttctcagccaaatcaaatatgt 35672129  T
Q  445 caatagcaatact 457  Q
     || |||||||||    
T  35672130 gaacagcaatact 35672142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 345 - 457
Target Start/End: Complemental strand, 41622221 - 41622109
Alignment:
Q  345 ctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaatgtgt 444  Q
    |||||||||||||| || || ||| |   ||| ||||||||||||||||||| |  ||||||||||||||||||||||||||||  ||||||||||||||    
T  41622221 ctcggcagttaactacagccagttctttaaaatttcggcagttaactgccgatggacatttgagtaatttactcgtgtttctcagtcaaactaaatgtgt 41622122  T
Q  445 caatagcaatact 457  Q
    ||| | |||||||    
T  41622121 caacaacaatact 41622109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 340 - 422
Target Start/End: Complemental strand, 3891536 - 3891454
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgt 422  Q
    |||||||||||||||||||||| |||  |||   ||||||||||||||||||||||||| | |||||||||||||||||||||    
T  3891536 ttttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgccgaggggtatttgagtaatttactcgtgt 3891454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 378 - 447
Target Start/End: Complemental strand, 35564276 - 35564207
Alignment:
Q  378 ttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaatgtgtcaa 447  Q
    ||||||||||||||||||| ||  |||||||||| ||||||||||||||||||||||| |||||||||||    
T  35564276 ttcggcagttaactgccgaagaatatttgagtaaattactcgtgtttctcaaccaaaccaaatgtgtcaa 35564207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 340 - 443
Target Start/End: Original strand, 3892460 - 3892560
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaa 439  Q
    |||||||||||||||||||||| ||||||| | |||  |||||||||||||||||||||  ||||||||||||||||||||||  |  |||||||| |||    
T  3892460 ttttcctcggcagttaactgcagccggtttca-taa--ttcggcagttaactgccgagggacatttgagtaatttactcgtgtggcataaccaaaccaaa 3892556  T
Q  440 tgtg 443  Q
    ||||    
T  3892557 tgtg 3892560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 340 - 457
Target Start/End: Original strand, 35282420 - 35282536
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaa 439  Q
    |||||||||||||||||||||| ||| || |  |||| ||| |||||||||||   ||| ||||||||||||||||||  ||||||||| ||||||||||    
T  35282420 ttttcctcggcagttaactgcagccgattcttttaaatttcagcagttaactgagaagg-gcatttgagtaatttactaatgtttctcagccaaactaaa 35282518  T
Q  440 tgtgtcaatagcaatact 457  Q
    ||||| || | |||||||    
T  35282519 tgtgtaaacaacaatact 35282536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 332 - 454
Target Start/End: Complemental strand, 42912218 - 42912098
Alignment:
Q  332 agttttca-ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaac 430  Q
    |||||||| ||||||||||||||||||| || ||||||| | |||  ||||||||||||||||||||||||||||| |||| ||||| ||  |||||| |    
T  42912218 agttttcagttttcctcggcagttaactacagccggtttca-taa--ttcggcagttaactgccgaggagcatttgggtaaattactagtaattctcagc 42912122  T
Q  431 caaactaaatgtgtcaatagcaat 454  Q
    ||||   |||||||||| ||||||    
T  42912121 caaaggtaatgtgtcaacagcaat 42912098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 340 - 422
Target Start/End: Complemental strand, 5829 - 5747
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgt 422  Q
    |||||||||||| |||||||||  ||  |||   ||||||||||||||||||||||||| || ||||||||||||||||||||    
T  5829 ttttcctcggcaattaactgcagtcgtatttctaaaacttcggcagttaactgccgaggggcgtttgagtaatttactcgtgt 5747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 380 - 445
Target Start/End: Complemental strand, 204520 - 204454
Alignment:
Q  380 cggcagttaactgccga-ggagcatttgagtaatttactcgtgtttctcaaccaaactaaatgtgtc 445  Q
    ||||||||||||||||| || |||||||||||| ||||| |||||||||| ||||||||||||||||    
T  204520 cggcagttaactgccgaaggggcatttgagtaaattactggtgtttctcagccaaactaaatgtgtc 204454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 341 - 422
Target Start/End: Original strand, 14684 - 14765
Alignment:
Q  341 tttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgt 422  Q
    |||||||||||||||||| || |||  |||   ||||||||||||||||||||||| |  ||||||||||||||||||||||    
T  14684 tttcctcggcagttaactacagccgtatttctaaaacttcggcagttaactgccgaaggacatttgagtaatttactcgtgt 14765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 374 - 443
Target Start/End: Original strand, 30711214 - 30711283
Alignment:
Q  374 aaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaatgtg 443  Q
    ||||||||||||||||||||||||||||||||| |||||||||| ||||  |  | ||||||||||||||    
T  30711214 aaacttcggcagttaactgccgaggagcatttgcgtaatttacttgtgtggcatagccaaactaaatgtg 30711283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 343 - 435
Target Start/End: Complemental strand, 13563717 - 13563625
Alignment:
Q  343 tcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaac 435  Q
    ||||||||||||||||||| |||| ||   ||  |||||||||||||||||||||| | ||||| |||||||||  |||||||||| ||||||    
T  13563717 tcctcggcagttaactgcagccggattacatattcttcggcagttaactgccgaggggtatttgggtaatttacatgtgtttctcagccaaac 13563625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 343 - 447
Target Start/End: Original strand, 38408490 - 38408594
Alignment:
Q  343 tcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaatgt 442  Q
    ||||||| ||||||||||   |||||||   |||||||||||||||| |||||| | ||||||  |||| |||||||||| ||||| |||||| ||||||    
T  38408490 tcctcgggagttaactgccgtcggttttctaaaacttcggcagttaattgccgaagggcatttaggtaaattactcgtgtgtctcagccaaaccaaatgt 38408589  T
Q  443 gtcaa 447  Q
    |||||    
T  38408590 gtcaa 38408594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 399 - 457
Target Start/End: Complemental strand, 35651409 - 35651351
Alignment:
Q  399 agcatttgagtaatttactcgtgtttctcaaccaaactaaatgtgtcaatagcaatact 457  Q
    ||||||||| |||||||||||||||||||| |||||| ||||||||||| | |||||||    
T  35651409 agcatttgaataatttactcgtgtttctcagccaaaccaaatgtgtcaacaacaatact 35651351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 339 - 457
Target Start/End: Original strand, 40789226 - 40789344
Alignment:
Q  339 attttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaa 438  Q
    ||||||||||||||||||||||| ||| || |   ||| ||| | | ||||||||| | |  ||||||| |||||||||| |||||||||| ||||| ||    
T  40789226 attttcctcggcagttaactgcagccgattctttaaaatttcagtaattaactgccaatggacatttgaataatttactcatgtttctcaatcaaaccaa 40789325  T
Q  439 atgtgtcaatagcaatact 457  Q
    ||||||||| | |||||||    
T  40789326 atgtgtcaacaacaatact 40789344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 346 - 447
Target Start/End: Original strand, 38971649 - 38971750
Alignment:
Q  346 tcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaatgtgtc 445  Q
    |||||||||||||||| |||||||    ||| ||||| ||||||||||||| | ||||||  |||| ||| |||||| |||||||| ||| |||||||||    
T  38971649 tcggcagttaactgcagccggtttccacaaaattcgggagttaactgccgaagggcatttaggtaaattagtcgtgtgtctcaacctaaccaaatgtgtc 38971748  T
Q  446 aa 447  Q
    ||    
T  38971749 aa 38971750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 343 - 444
Target Start/End: Original strand, 41623071 - 41623172
Alignment:
Q  343 tcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaatgt 442  Q
    |||||||||||| |||||| |||||| |   ||| ||||||||||||||||||| | | ||||| |||| |||| ||||||||||| | |||| ||||||    
T  41623071 tcctcggcagtttactgcagccggttctttaaaatttcggcagttaactgccgaagggtatttgggtaaattacccgtgtttctcagctaaaccaaatgt 41623170  T
Q  443 gt 444  Q
    ||    
T  41623171 gt 41623172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 340 - 426
Target Start/End: Original strand, 20509571 - 20509657
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgagga---gcatttgagtaatttactcgtgtttct 426  Q
    |||||||||| ||||||||||||| ||||| | |||  ||||||||||||||||||| ||   |||||||||||| ||||||||||||||    
T  20509571 ttttcctcggtagttaactgcaactggtttca-taa--ttcggcagttaactgccgaagaagggcatttgagtaaattactcgtgtttct 20509657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 342 - 405
Target Start/End: Original strand, 20744015 - 20744078
Alignment:
Q  342 ttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcattt 405  Q
    |||||||||||||||||||| ||| || |   ||||||||||||||||||||||||| ||||||    
T  20744015 ttcctcggcagttaactgcagccgattctttaaaacttcggcagttaactgccgaggggcattt 20744078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 378 - 433
Target Start/End: Original strand, 40788784 - 40788839
Alignment:
Q  378 ttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaa 433  Q
    |||||||||||||||||||||||||||||  ||| |||||||||||| ||| ||||    
T  40788784 ttcggcagttaactgccgaggagcatttggataaattactcgtgtttttcagccaa 40788839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 340 - 398
Target Start/End: Complemental strand, 7757378 - 7757320
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgagg 398  Q
    |||||||||||||||||||||| |||| |||   ||||||||||||||||||| |||||    
T  7757378 ttttcctcggcagttaactgcagccggatttctaaaacttcggcagttaactgtcgagg 7757320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 340 - 398
Target Start/End: Original strand, 7762264 - 7762322
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgagg 398  Q
    ||||||||| ||||||||||||||||  |||   |||||||||||||||||||||||||    
T  7762264 ttttcctcgacagttaactgcaaccgaatttctaaaacttcggcagttaactgccgagg 7762322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 378 - 427
Target Start/End: Complemental strand, 8679578 - 8679529
Alignment:
Q  378 ttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctc 427  Q
    |||||||||||||||||||||  ||||| ||||| |||||||||||||||    
T  8679578 ttcggcagttaactgccgagggacatttcagtaaattactcgtgtttctc 8679529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 315 - 360
Target Start/End: Complemental strand, 13707527 - 13707482
Alignment:
Q  315 tgatgatgataattttgagttttcattttcctcggcagttaactgc 360  Q
    ||||||| ||||||||| ||||||||||||||||| ||||||||||    
T  13707527 tgatgattataattttgggttttcattttcctcggtagttaactgc 13707482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 311 - 360
Target Start/End: Original strand, 18512617 - 18512666
Alignment:
Q  311 ccattgatgatgataattttgagttttcattttcctcggcagttaactgc 360  Q
    |||||||||||||||||| ||||||||||||||  |||||||||| ||||    
T  18512617 ccattgatgatgataattctgagttttcatttttttcggcagttagctgc 18512666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 374 - 443
Target Start/End: Complemental strand, 27659958 - 27659889
Alignment:
Q  374 aaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaatgtg 443  Q
    |||||||||||||| ||| |||| | |||||||||||||||||||||||  | || |||||| |||||||    
T  27659958 aaacttcggcagtttactaccgaagggcatttgagtaatttactcgtgtggcacagccaaaccaaatgtg 27659889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 343 - 447
Target Start/End: Original strand, 5200379 - 5200483
Alignment:
Q  343 tcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaatgt 442  Q
    ||||||| ||||||||||| ||| ||||   |||||||| ||||||||| |||| || |||||  |||| ||||| |||| ||| |||||||| ||||||    
T  5200379 tcctcgggagttaactgcagccgattttctaaaacttcgacagttaactaccgatgaacatttaggtaaattacttgtgtgtcttaaccaaaccaaatgt 5200478  T
Q  443 gtcaa 447  Q
     ||||    
T  5200479 atcaa 5200483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 374 - 422
Target Start/End: Complemental strand, 8574700 - 8574652
Alignment:
Q  374 aaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgt 422  Q
    |||||||||||||| ||| |||| | |||||||||||||||||||||||    
T  8574700 aaacttcggcagtttactaccgaagggcatttgagtaatttactcgtgt 8574652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 315 - 359
Target Start/End: Complemental strand, 13665520 - 13665476
Alignment:
Q  315 tgatgatgataattttgagttttcattttcctcggcagttaactg 359  Q
    ||||||||||||||||| |||||||||||| |||| |||||||||    
T  13665520 tgatgatgataattttgggttttcattttcttcggtagttaactg 13665476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 382 - 454
Target Start/End: Original strand, 34080134 - 34080206
Alignment:
Q  382 gcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaatgtgtcaatagcaat 454  Q
    ||||||||||||||||| | ||||| |||||||||| |||||| ||| |||| | | ||||||||| ||||||    
T  34080134 gcagttaactgccgaggggtatttgggtaatttacttgtgtttatcagccaaccaacatgtgtcaacagcaat 34080206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 340 - 399
Target Start/End: Original strand, 38855731 - 38855791
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttact-aaacttcggcagttaactgccgagga 399  Q
    |||||||||||||||||||||  |||||||   | ||||||||||||||||||||||||||    
T  38855731 ttttcctcggcagttaactgccgccggtttccttcaaacttcggcagttaactgccgagga 38855791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 340 - 392
Target Start/End: Original strand, 43094596 - 43094648
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactg 392  Q
    |||||||||||||||||||||| |||| |||   |||||||||||||||||||    
T  43094596 ttttcctcggcagttaactgcagccggatttctaaaacttcggcagttaactg 43094648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 396
Target Start/End: Complemental strand, 42937244 - 42937189
Alignment:
Q  341 tttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccga 396  Q
    |||| |||||||||||||||  ||||||||  |||||||||||||||||| |||||    
T  42937244 tttcttcggcagttaactgccgccggttttcttaaacttcggcagttaaccgccga 42937189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 339 - 422
Target Start/End: Original strand, 8580498 - 8580582
Alignment:
Q  339 attttcctcggcagttaactgcaaccggttttactaaa--cttcggcagttaactgccgaggagcatttgagtaatttactcgtgt 422  Q
    ||||||||||||||||||||||  ||| |||  |||||  |||||||||  |||| |||| | |||||||||||||||||||||||    
T  8580498 attttcctcggcagttaactgccgccgatttc-ctaaaaacttcggcagcaaactaccgaagggcatttgagtaatttactcgtgt 8580582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 422
Target Start/End: Complemental strand, 13837777 - 13837694
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttact--aaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgt 422  Q
    |||||||||||||||||||||  |||| ||||||  |||||||||||||| |||||||| | ||||||  ||||  |||||||||    
T  13837777 ttttcctcggcagttaactgccgccgg-tttactaaaaacttcggcagtttactgccgaagggcatttttgtaaagtactcgtgt 13837694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 396
Target Start/End: Original strand, 19037490 - 19037547
Alignment:
Q  340 ttttcctcggcagttaactgcaaccgg-ttttactaaacttcggcagttaactgccga 396  Q
    |||||||||||||||||||||| |||| ||| |  ||| |||||||||||||||||||    
T  19037490 ttttcctcggcagttaactgcagccggatttgagaaaatttcggcagttaactgccga 19037547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 315 - 360
Target Start/End: Complemental strand, 29430126 - 29430081
Alignment:
Q  315 tgatgatgataattttgagttttcattttcctcggcagttaactgc 360  Q
    |||||||||||||| || ||||||||||| ||||| ||||||||||    
T  29430126 tgatgatgataattctgggttttcatttttctcggtagttaactgc 29430081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 344 - 396
Target Start/End: Complemental strand, 30708952 - 30708899
Alignment:
Q  344 cctcggcagttaactgcaaccgg-ttttactaaacttcggcagttaactgccga 396  Q
    |||||||||||||||||| |||| |||| | ||| |||||||||||||||||||    
T  30708952 cctcggcagttaactgcagccggatttttcaaaatttcggcagttaactgccga 30708899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 379 - 447
Target Start/End: Complemental strand, 5197058 - 5196990
Alignment:
Q  379 tcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaatgtgtcaa 447  Q
    |||||||||||||||||||| ||||||   ||| |||||||||| ||||| | ||||  ||||||||||    
T  5197058 tcggcagttaactgccgaggggcatttagataaattactcgtgtgtctcagcgaaacctaatgtgtcaa 5196990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 378 - 422
Target Start/End: Original strand, 8680301 - 8680345
Alignment:
Q  378 ttcggcagttaactgccgaggagcatttgagtaatttactcgtgt 422  Q
    ||||||||||||||||||| | ||||||| |||| ||||||||||    
T  8680301 ttcggcagttaactgccgaagggcatttgggtaaattactcgtgt 8680345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 374 - 422
Target Start/End: Complemental strand, 11027113 - 11027065
Alignment:
Q  374 aaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgt 422  Q
    ||||||||||||||||||||||| | ||||||  ||| |||||||||||    
T  11027113 aaacttcggcagttaactgccgaagggcattttggtattttactcgtgt 11027065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 340 - 392
Target Start/End: Complemental strand, 11346060 - 11346008
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactg 392  Q
    |||||||||||||||||||||| | || |||   |||||||||||||||||||    
T  11346060 ttttcctcggcagttaactgcagctggatttctaaaacttcggcagttaactg 11346008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 340 - 399
Target Start/End: Complemental strand, 28880375 - 28880315
Alignment:
Q  340 ttttcctcggcagttaactgcaaccgg-ttttactaaacttcggcagttaactgccgagga 399  Q
    |||||||||||||||  ||||| |||| |||| | ||| ||||||||||||||||||||||    
T  28880375 ttttcctcggcagtttgctgcagccggatttttcaaaatttcggcagttaactgccgagga 28880315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 382 - 454
Target Start/End: Complemental strand, 35281850 - 35281778
Alignment:
Q  382 gcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaatgtgtcaatagcaat 454  Q
    ||||||||||||||||  ||||||| |||| ||| | |||||||||| |||||   |||||||||| ||||||    
T  35281850 gcagttaactgccgagaggcatttgggtaaattattagtgtttctcagccaaaggtaatgtgtcaacagcaat 35281778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 374 - 422
Target Start/End: Complemental strand, 38853497 - 38853449
Alignment:
Q  374 aaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgt 422  Q
    ||||||||||||||||||||||| | ||||||  ||| |||||||||||    
T  38853497 aaacttcggcagttaactgccgaagggcattttggtattttactcgtgt 38853449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 254; Significance: 1e-141; HSPs: 80)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 18 - 360
Target Start/End: Complemental strand, 12207125 - 12206783
Alignment:
Q  18 atcaatgggtacagtttcaatgcattccaagccaaaaattataatacgctatgtcgattacggggaacttgttgaacaagttctataagacaaatcaaag 117  Q
    |||||||||||||  | |||||||||| ||| |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||    
T  12207125 atcaatgggtacaactccaatgcattcaaaggcaaaaattataatacgctatgttgattacagggaacttgttgaacaagttctataagacaaatcaaag 12207026  T
Q  118 gcaaaatcatcactaaagaatcactnnnnnnnctcatgtcttcaatgatttgtgaattatgcagcgatatccataatgaatcaaaatcgaatttaattca 217  Q
    ||||||||||||||||| |||||||       ||||||| ||||||||||||||||||||||||||||||||||||  |||| |||||||||||||||||    
T  12207025 gcaaaatcatcactaaaaaatcactaaaaaaactcatgtgttcaatgatttgtgaattatgcagcgatatccataacaaatcgaaatcgaatttaattca 12206926  T
Q  218 atccattgatgatgatgatgtaaccactgttacactaggaattggaaatgaaagagaactggaaccgaaatgtgcagattcttgataatgaacccattga 317  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||    
T  12206925 atccattgatgatgatgatgtaaccactgttacactaggaattggaaatgaaagagagctggaatcgaaatgtgcagattcttgataatgaacccattga 12206826  T
Q  318 tgatgataattttgagttttcattttcctcggcagttaactgc 360  Q
    ||||||||||| ||||||||||||||| |||| ||||||||||    
T  12206825 tgatgataattctgagttttcattttcttcggtagttaactgc 12206783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 18 - 360
Target Start/End: Complemental strand, 12451553 - 12451211
Alignment:
Q  18 atcaatgggtacagtttcaatgcattccaagccaaaaattataatacgctatgtcgattacggggaacttgttgaacaagttctataagacaaatcaaag 117  Q
    |||||||||||||  | |||||||||| ||| |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||    
T  12451553 atcaatgggtacaactccaatgcattcaaaggcaaaaattataatacgctatgttgattacagggaacttgttgaacaagttctataagacaaatcaaag 12451454  T
Q  118 gcaaaatcatcactaaagaatcactnnnnnnnctcatgtcttcaatgatttgtgaattatgcagcgatatccataatgaatcaaaatcgaatttaattca 217  Q
    ||||||||||||||||| |||||||       ||||||| ||||||||||||||||||||||||||||||||||||  |||| |||||||||||||||||    
T  12451453 gcaaaatcatcactaaaaaatcactaaaaaaactcatgtgttcaatgatttgtgaattatgcagcgatatccataacaaatcgaaatcgaatttaattca 12451354  T
Q  218 atccattgatgatgatgatgtaaccactgttacactaggaattggaaatgaaagagaactggaaccgaaatgtgcagattcttgataatgaacccattga 317  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||    
T  12451353 atccattgatgatgatgatgtaaccactgttacactaggaattggaaatgaaagagagctggaatcgaaatgtgcagattcttgataatgaacccattga 12451254  T
Q  318 tgatgataattttgagttttcattttcctcggcagttaactgc 360  Q
    ||||||||||| ||||||||||||||| |||| ||||||||||    
T  12451253 tgatgataattctgagttttcattttcttcggtagttaactgc 12451211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 25 - 359
Target Start/End: Complemental strand, 28694483 - 28694138
Alignment:
Q  25 ggtacagtttcaatgcattccaagccaaaaattataatacgctatgtcgattacggggaacttgttgaacaagttct----ataagacaaatcaaaggca 120  Q
    ||||||||| |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| | ||    |||||||||||||||||||    
T  28694483 ggtacagttccaatgcattcaaaggcaaaaattataatacgctatgtcgattacggggaacttgttgaacaaatactttttataagacaaatcaaaggca 28694384  T
Q  121 aaatcatcactaaagaatcactnnnnnnnctcatgtcttcaatgatttgtgaattatgcagcgatatccataatgaatcaaaatcgaatttaattcaatc 220  Q
    |||||||||||||| |||||||       || | || ||||||||||||||||||||| ||||||||||||||  |||| ||||||||||||||||||||    
T  28694383 aaatcatcactaaaaaatcactacaaaaactaacgtgttcaatgatttgtgaattatgtagcgatatccataacaaatcgaaatcgaatttaattcaatc 28694284  T
Q  221 cattgatgatgatgatgtaaccactgttacactaggaattggaaatgaaagagaactggaaccgaaatgtgcagattcttgataatgaacccattgat-- 318  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||      
T  28694283 cattgatgatgatgatgtaaccactgttacactaggaattggaaatgaaagagaattggaaccgaaatgtgtagattcttgataatgaacccattgatga 28694184  T
Q  319 -----gatgataattttgagttttcattttcctcggcagttaactg 359  Q
         |||||||||| ||||||||||||||||| |  |||||||||    
T  28694183 tggatgatgataattctgagttttcattttcctggctagttaactg 28694138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 340 - 457
Target Start/End: Complemental strand, 28694131 - 28694014
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaa 439  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  28694131 ttttcctcggcagttaactgcagccggttttactaaacttcggcagttaactgccgagggacatttgagtaatttactcgtgtttctcaaccaaactaaa 28694032  T
Q  440 tgtgtcaatagcaatact 457  Q
    |||||||| |||||||||    
T  28694031 tgtgtcaacagcaatact 28694014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 340 - 447
Target Start/End: Original strand, 39277481 - 39277588
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaa 439  Q
    |||||||||| | ||||||||| ||| || ||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| |||||| |||    
T  39277481 ttttcctcggtaattaactgcagccgattctactaaacttcggcagttaactgccgaggggcatttgaataatttactcgtgtttctcagccaaaccaaa 39277580  T
Q  440 tgtgtcaa 447  Q
    ||||||||    
T  39277581 tgtgtcaa 39277588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 340 - 457
Target Start/End: Complemental strand, 12206777 - 12206660
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaa 439  Q
    ||||||||| | |||||||||| |||||||||||||||||||||||||||||||| | |  ||||||||||||||| |||||||||||||| ||| ||||    
T  12206777 ttttcctcgacggttaactgcacccggttttactaaacttcggcagttaactgccaatggacatttgagtaatttaatcgtgtttctcaactaaattaaa 12206678  T
Q  440 tgtgtcaatagcaatact 457  Q
    |||||||| | |||||||    
T  12206677 tgtgtcaacaacaatact 12206660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 340 - 457
Target Start/End: Complemental strand, 12451205 - 12451088
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaa 439  Q
    ||||||||| | |||||||||| |||||||||||||||||||||||||||||||| | |  ||||||||||||||| |||||||||||||| ||| ||||    
T  12451205 ttttcctcgacggttaactgcacccggttttactaaacttcggcagttaactgccaatggacatttgagtaatttaatcgtgtttctcaactaaattaaa 12451106  T
Q  440 tgtgtcaatagcaatact 457  Q
    |||||||| | |||||||    
T  12451105 tgtgtcaacaacaatact 12451088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 351 - 457
Target Start/End: Original strand, 12207236 - 12207342
Alignment:
Q  351 agttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaatgtgtcaatag 450  Q
    ||||||||||| ||  |||||||||||||||||||||||||||||| | |||||||||||||||| |||||||||||| ||||| |||||||||||| |     
T  12207236 agttaactgcagccaattttactaaacttcggcagttaactgccgatgggcatttgagtaatttattcgtgtttctcagccaaattaaatgtgtcaacat 12207335  T
Q  451 caatact 457  Q
    |||||||    
T  12207336 caatact 12207342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 351 - 457
Target Start/End: Original strand, 12451664 - 12451770
Alignment:
Q  351 agttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaatgtgtcaatag 450  Q
    ||||||||||| ||  |||||||||||||||||||||||||||||| | |||||||||||||||| |||||||||||| ||||| |||||||||||| |     
T  12451664 agttaactgcagccaattttactaaacttcggcagttaactgccgatgggcatttgagtaatttattcgtgtttctcagccaaattaaatgtgtcaacat 12451763  T
Q  451 caatact 457  Q
    |||||||    
T  12451764 caatact 12451770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 345 - 457
Target Start/End: Complemental strand, 34892058 - 34891946
Alignment:
Q  345 ctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaatgtgt 444  Q
    |||||||||||||||||||||||| |   ||| || |  |||||||||||||||||||||||| ||||||| |||||||||||| | |||| ||||||||    
T  34892058 ctcggcagttaactgcaaccggttctttaaaattttgatagttaactgccgaggagcatttgaataatttattcgtgtttctcagctaaaccaaatgtgt 34891959  T
Q  445 caatagcaatact 457  Q
    ||| |||||||||    
T  34891958 caacagcaatact 34891946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 342 - 444
Target Start/End: Original strand, 36345927 - 36346029
Alignment:
Q  342 ttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaatg 441  Q
    |||||||||||||||||||| |||||  |  |||| ||||||||||||||| ||| || |||||||||||||||||||||||| ||| |||||| |||||    
T  36345927 ttcctcggcagttaactgcagccggtgcttttaaatttcggcagttaactgtcgaagaacatttgagtaatttactcgtgtttatcagccaaaccaaatg 36346026  T
Q  442 tgt 444  Q
    |||    
T  36346027 tgt 36346029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 340 - 422
Target Start/End: Complemental strand, 44933912 - 44933830
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgt 422  Q
    |||||||||||||||||||||| |||  |||   ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  44933912 ttttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgccgaggggcatttgagtaatttactcgtgt 44933830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 340 - 422
Target Start/End: Original strand, 2335168 - 2335250
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgt 422  Q
    |||||||||||||||||||||| |||  |||   ||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  2335168 ttttcctcggcagttaactgcagccgtatttctaaaacttcggtagttaactgccgaggggcatttgagtaatttactcgtgt 2335250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 340 - 454
Target Start/End: Complemental strand, 41016467 - 41016353
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaa 439  Q
    ||||||||||||||||||||||   || |||   ||||||||| ||||||||| ||||| |||||||| | |||||||||||||||| | ||||||| ||    
T  41016467 ttttcctcggcagttaactgcagttggatttctaaaacttcggtagttaactgtcgaggggcatttgaatgatttactcgtgtttcttagccaaactcaa 41016368  T
Q  440 tgtgtcaatagcaat 454  Q
    |||||||| ||||||    
T  41016367 tgtgtcaacagcaat 41016353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 344 - 409
Target Start/End: Original strand, 12207173 - 12207238
Alignment:
Q  344 cctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagt 409  Q
    ||||||||| |||||||| |||||||||||||||||| ||||||||||| ||||||||||||||||    
T  12207173 cctcggcagctaactgcagccggttttactaaacttcagcagttaactgtcgaggagcatttgagt 12207238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 344 - 409
Target Start/End: Original strand, 12451601 - 12451666
Alignment:
Q  344 cctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagt 409  Q
    ||||||||| |||||||| |||||||||||||||||| ||||||||||| ||||||||||||||||    
T  12451601 cctcggcagctaactgcagccggttttactaaacttcagcagttaactgtcgaggagcatttgagt 12451666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 340 - 457
Target Start/End: Complemental strand, 13782288 - 13782171
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaa 439  Q
    ||||||||||||||||| ||||  ||||| |   ||| || ||||||||||||||||||  ||||| |||||||||||||||||||||| |||||  |||    
T  13782288 ttttcctcggcagttaattgcagtcggttctttaaaattttggcagttaactgccgagggacatttaagtaatttactcgtgtttctcagccaaatcaaa 13782189  T
Q  440 tgtgtcaatagcaatact 457  Q
    |||||||| | |||||||    
T  13782188 tgtgtcaacaacaatact 13782171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 342 - 447
Target Start/End: Original strand, 39513209 - 39513314
Alignment:
Q  342 ttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaatg 441  Q
    ||||||| ||||||| |||| |||||| |   ||| ||||  ||||||||||||||| |||||||||||||||||||||||||||||  ||||| |||||    
T  39513209 ttcctcgacagttaattgcagccggttctttaaaatttcgatagttaactgccgaggggcatttgagtaatttactcgtgtttctcagtcaaaccaaatg 39513308  T
Q  442 tgtcaa 447  Q
    ||||||    
T  39513309 tgtcaa 39513314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 340 - 457
Target Start/End: Complemental strand, 40740959 - 40740842
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaa 439  Q
    |||||||||||||||||||||| |||||| |   ||| ||||||||||||||| ||| |   ||||| |||| |||||||||||||||| |||||| |||    
T  40740959 ttttcctcggcagttaactgcagccggttctttaaaatttcggcagttaactgtcgaaggatatttgggtaaattactcgtgtttctcagccaaaccaaa 40740860  T
Q  440 tgtgtcaatagcaatact 457  Q
    ||||| || |||||||||    
T  40740859 tgtgtgaacagcaatact 40740842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 340 - 444
Target Start/End: Original strand, 43520796 - 43520900
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaa 439  Q
    |||||||| ||||||||||||| ||| || |   ||| ||||||||||||||||||| || ||||||| ||||||||||||||||||||  ||||| |||    
T  43520796 ttttcctcagcagttaactgcagccgattctttaaaatttcggcagttaactgccgatgaacatttgaataatttactcgtgtttctcactcaaaccaaa 43520895  T
Q  440 tgtgt 444  Q
    |||||    
T  43520896 tgtgt 43520900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 340 - 422
Target Start/End: Original strand, 27502588 - 27502667
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgt 422  Q
    |||||||||||||||||||||| ||||||| | |||  |||| |||||||||||||||| |||||||||||||||||||||||    
T  27502588 ttttcctcggcagttaactgcagccggtttca-taa--ttcgacagttaactgccgaggggcatttgagtaatttactcgtgt 27502667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 342 - 457
Target Start/End: Original strand, 38134134 - 38134249
Alignment:
Q  342 ttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaatg 441  Q
    |||||||||||||||||||| |||||| |   ||| || | |||||||||||||| | |||||||||||||||||| |||| ||||| |||||| |||||    
T  38134134 ttcctcggcagttaactgcagccggttctttaaaattttgacagttaactgccgatgggcatttgagtaatttacttgtgtctctcagccaaaccaaatg 38134233  T
Q  442 tgtcaatagcaatact 457  Q
    ||| || | |||||||    
T  38134234 tgtaaacaacaatact 38134249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 340 - 422
Target Start/End: Original strand, 5533045 - 5533127
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgt 422  Q
    |||||||||||||||||||||| |||  |||   |||||||||||||||||||| |||| | |||||||||||||||||||||    
T  5533045 ttttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgctgaggggtatttgagtaatttactcgtgt 5533127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 340 - 422
Target Start/End: Complemental strand, 28617621 - 28617539
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgt 422  Q
    |||||||||||||||||||||| |||  |||   ||||||||||||||||||||||| | | |||||||||||||||||||||    
T  28617621 ttttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgccgaagggtatttgagtaatttactcgtgt 28617539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 332 - 422
Target Start/End: Original strand, 32585004 - 32585092
Alignment:
Q  332 agttttca-ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgt 422  Q
    |||||||| |||||||||||||||||||||| ||||||| | |||  |||||||||||||| ||||||  ||||||||||||||||||||||    
T  32585004 agttttcagttttcctcggcagttaactgcagccggtttca-taa--ttcggcagttaactaccgagggacatttgagtaatttactcgtgt 32585092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 351 - 447
Target Start/End: Complemental strand, 39831198 - 39831102
Alignment:
Q  351 agttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaatgtgtcaa 447  Q
    ||||||||||| ||||||||   ||| |||||||||||||| |||||| ||||||  |||| |||||||||| ||||| |||||| |||||||||||    
T  39831198 agttaactgcagccggttttctaaaatttcggcagttaactaccgaggggcatttaggtaaattactcgtgtgtctcagccaaaccaaatgtgtcaa 39831102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 342 - 421
Target Start/End: Complemental strand, 3085592 - 3085513
Alignment:
Q  342 ttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtg 421  Q
    |||||||||||||||||||| |||||| |   ||| ||||| |||||||| ||||||| |||||||||||||||||||||    
T  3085592 ttcctcggcagttaactgcagccggttctttaaaatttcggtagttaactaccgaggaacatttgagtaatttactcgtg 3085513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 342 - 457
Target Start/End: Complemental strand, 16939431 - 16939316
Alignment:
Q  342 ttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaatg 441  Q
    |||||||||||||||||||| |||||| |   ||| ||| |||||||||||||||   | ||||| |||| |||||||||||||||| | |||| |||||    
T  16939431 ttcctcggcagttaactgcagccggttctttaaaatttcagcagttaactgccgaaaggtatttgggtaaattactcgtgtttctcagcaaaaccaaatg 16939332  T
Q  442 tgtcaatagcaatact 457  Q
    ||| || |||||||||    
T  16939331 tgtgaacagcaatact 16939316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 339 - 434
Target Start/End: Original strand, 16940295 - 16940390
Alignment:
Q  339 attttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaa 434  Q
    |||||||||| ||||||||||||||||||| |   ||| ||||||| ||||||||| ||   ||||| |||||||||||||||||||||| |||||    
T  16940295 attttcctcgacagttaactgcaaccggttctttaaaatttcggcacttaactgccaagagacatttaagtaatttactcgtgtttctcagccaaa 16940390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 340 - 454
Target Start/End: Complemental strand, 7120953 - 7120839
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaa 439  Q
    |||| |||||||| |||||||| |||||||   |||| ||| ||||||||||||||| |   ||||   ||| |||||||||||||||| ||||||||||    
T  7120953 tttttctcggcagctaactgcagccggtttctttaaaattcagcagttaactgccgaaggatatttagataaattactcgtgtttctcagccaaactaaa 7120854  T
Q  440 tgtgtcaatagcaat 454  Q
    |||||||||| ||||    
T  7120853 tgtgtcaataacaat 7120839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 340 - 422
Target Start/End: Original strand, 22550885 - 22550967
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgt 422  Q
    |||||||||||||||||||||| |||| |||   ||||||||||||||||||||||| | ||||||  |||| ||||||||||    
T  22550885 ttttcctcggcagttaactgcagccggatttctaaaacttcggcagttaactgccgaagggcatttaggtaaattactcgtgt 22550967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 340 - 422
Target Start/End: Complemental strand, 27501653 - 27501571
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgt 422  Q
    |||||||||||||||||||||| |||  |||   ||||||||| ||||||||||||||  | |||||||||||||||||||||    
T  27501653 ttttcctcggcagttaactgcagccgtatttctaaaacttcggtagttaactgccgagaggtatttgagtaatttactcgtgt 27501571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 340 - 422
Target Start/End: Complemental strand, 32584105 - 32584023
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgt 422  Q
    |||||||||||||||||||||| |||  |||   |||||||| ||||||||| |||||| | |||||||||||||||||||||    
T  32584105 ttttcctcggcagttaactgcagccgtatttctaaaacttcgacagttaactaccgaggggtatttgagtaatttactcgtgt 32584023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 400 - 457
Target Start/End: Complemental strand, 37651809 - 37651752
Alignment:
Q  400 gcatttgagtaatttactcgtgtttctcaaccaaactaaatgtgtcaatagcaatact 457  Q
    ||||||||||||||||||||||||||||| |||||| ||||||||||| | |||||||    
T  37651809 gcatttgagtaatttactcgtgtttctcagccaaaccaaatgtgtcaacaacaatact 37651752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 340 - 417
Target Start/End: Original strand, 38604268 - 38604345
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttact 417  Q
    |||||||||||||||||||||| |||  |||   ||||||||||||||||||| ||||| | ||||||||||||||||    
T  38604268 ttttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgtcgaggggtatttgagtaatttact 38604345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 340 - 424
Target Start/End: Original strand, 7121806 - 7121890
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgttt 424  Q
    |||||||| ||||||||||||| |||||| |   ||| |||| |||||||||||||||  |||||||||||||||||| ||||||    
T  7121806 ttttcctcagcagttaactgcagccggttctttaaaatttcgacagttaactgccgagaggcatttgagtaatttacttgtgttt 7121890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 340 - 433
Target Start/End: Complemental strand, 3695420 - 3695330
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaa 433  Q
    |||||||||| ||||||||||| ||||||   | | | ||||||||||||||||||||| |||||||  ||| |||||||||||||||| ||||    
T  3695420 ttttcctcggtagttaactgcagccggtt---ccataattcggcagttaactgccgaggggcatttggataaattactcgtgtttctcagccaa 3695330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 340 - 422
Target Start/End: Complemental strand, 38603363 - 38603284
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgt 422  Q
    ||||||||| ||||||||||||  |||||| | |||  |||||||||||||||||||||| ||||| ||||||||||||||||    
T  38603363 ttttcctcgacagttaactgcagtcggtttca-taa--ttcggcagttaactgccgaggaacatttaagtaatttactcgtgt 38603284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 336 - 431
Target Start/End: Original strand, 39583309 - 39583404
Alignment:
Q  336 ttcattttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaacc 431  Q
    ||||| |||||||||||||||||||| ||| ||||  || | ||||||||||||||| ||| |   |||||| |||||||||||| ||||||||||    
T  39583309 ttcatgttcctcggcagttaactgcagccgatttttttagaattcggcagttaactgtcgatggatatttgaataatttactcgtatttctcaacc 39583404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 340 - 443
Target Start/End: Complemental strand, 15030937 - 15030833
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttt--tactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaacta 437  Q
    |||||||||||||||||||||  |||||||  ||  |||||||||||||| ||| |||| | |||||||||||||||||||||||  | || |||||| |    
T  15030937 ttttcctcggcagttaactgccgccggtttccta-aaaacttcggcagtttactaccgaagggcatttgagtaatttactcgtgtggcacagccaaacca 15030839  T
Q  438 aatgtg 443  Q
    ||||||    
T  15030838 aatgtg 15030833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 340 - 454
Target Start/End: Complemental strand, 31745235 - 31745121
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaa 439  Q
    |||||||| | ||||||||||| | | ||||   |||||||||||||||||| |||| | | ||||| |||| |||||||||||||||| |||||| |||    
T  31745235 ttttcctcagtagttaactgcagctgtttttctaaaacttcggcagttaactaccgaagggtatttgggtaaattactcgtgtttctcagccaaaccaaa 31745136  T
Q  440 tgtgtcaatagcaat 454  Q
    || || || ||||||    
T  31745135 tgcgtaaacagcaat 31745121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 339 - 457
Target Start/End: Complemental strand, 36127426 - 36127308
Alignment:
Q  339 attttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaa 438  Q
    ||||||||| |||||||||| || ||||||||   |||||||| |||||||||||||||   | |||  |||| |||||||||| ||||| |||||| ||    
T  36127426 attttcctcagcagttaacttcagccggttttctaaaacttcgtcagttaactgccgagagacgtttaggtaaattactcgtgtgtctcagccaaaccaa 36127327  T
Q  439 atgtgtcaatagcaatact 457  Q
    ||||| ||| | |||||||    
T  36127326 atgtgccaacatcaatact 36127308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 340 - 422
Target Start/End: Original strand, 43363280 - 43363362
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgt 422  Q
    |||||||||| ||||||||||| |||  |||   |||||||||||||||| |||||||  | |||||||||||||||||||||    
T  43363280 ttttcctcggtagttaactgcagccgtatttctaaaacttcggcagttaagtgccgagaggtatttgagtaatttactcgtgt 43363362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 340 - 422
Target Start/End: Original strand, 44841894 - 44841976
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgt 422  Q
    |||| |||||||||||||||||||||  |||   |||||||||||||||||||| |||| | |||||| ||||||||| ||||    
T  44841894 tttttctcggcagttaactgcaaccgtatttctaaaacttcggcagttaactgctgaggggtatttgactaatttacttgtgt 44841976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 340 - 443
Target Start/End: Original strand, 45066381 - 45066485
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttt--tactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaacta 437  Q
    |||||||||||||||||||||  |||||||  ||  |||||||||||||| ||| |||| | |||||||||||||||||||||||  | || |||||| |    
T  45066381 ttttcctcggcagttaactgccgccggtttccta-aaaacttcggcagtttactaccgaagggcatttgagtaatttactcgtgtggcacagccaaacca 45066479  T
Q  438 aatgtg 443  Q
    ||||||    
T  45066480 aatgtg 45066485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 332 - 454
Target Start/End: Original strand, 34798822 - 34798942
Alignment:
Q  332 agttttca-ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaac 430  Q
    |||||||| |||||||||| ||||||||||| | ||||   | | | ||||||||||||||||||||| ||||||| |||| ||||| |||||||||| |    
T  34798822 agttttcagttttcctcggtagttaactgcagctggtt---ccataattcggcagttaactgccgaggggcatttgggtaaattacttgtgtttctcagc 34798918  T
Q  431 caaactaaatgtgtcaatagcaat 454  Q
    |||   | ||||||||| ||||||    
T  34798919 caatgcatatgtgtcaagagcaat 34798942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 343 - 447
Target Start/End: Original strand, 20859627 - 20859731
Alignment:
Q  343 tcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaatgt 442  Q
    ||||||| |||||| |||| |||||||    ||||||||||||||||||| |||||  |||||  |||| || ||||||| ||||| |||||| ||||||    
T  20859627 tcctcgggagttaaatgcagccggtttccacaaacttcggcagttaactgtcgagggacatttaggtaaattcctcgtgtgtctcagccaaaccaaatgt 20859726  T
Q  443 gtcaa 447  Q
    |||||    
T  20859727 gtcaa 20859731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 340 - 436
Target Start/End: Original strand, 36595966 - 36596062
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaact 436  Q
    |||||||||||||||||||||| |||||| |   ||| |||| || |||||||||||  | ||||| |||||||||| ||| ||||||| |||||||    
T  36595966 ttttcctcggcagttaactgcagccggttctttaaaatttcgacaattaactgccgaaaaacatttaagtaatttacacgtatttctcagccaaact 36596062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 400 - 447
Target Start/End: Complemental strand, 6013896 - 6013849
Alignment:
Q  400 gcatttgagtaatttactcgtgtttctcaaccaaactaaatgtgtcaa 447  Q
    |||||||||||||||||||||| |||||| |||||| |||||||||||    
T  6013896 gcatttgagtaatttactcgtgattctcagccaaaccaaatgtgtcaa 6013849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 410 - 457
Target Start/End: Original strand, 6013901 - 6013948
Alignment:
Q  410 aatttactcgtgtttctcaaccaaactaaatgtgtcaatagcaatact 457  Q
    ||||||||||||||||||| |||||||||||||||||| | |||||||    
T  6013901 aatttactcgtgtttctcagccaaactaaatgtgtcaacaacaatact 6013948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 340 - 435
Target Start/End: Original strand, 13783128 - 13783223
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaac 435  Q
    |||||||||||||||||||||| |||||| |   ||| |||| ||||||||||||||   | |||||||||| |||  ||||||||||| ||||||    
T  13783128 ttttcctcggcagttaactgcagccggttctttaaaatttcgacagttaactgccgaatggtatttgagtaaattaaccgtgtttctcagccaaac 13783223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 378 - 433
Target Start/End: Complemental strand, 36345021 - 36344966
Alignment:
Q  378 ttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaa 433  Q
    ||||||||||||||||||||| ||||||| |||| ||||| |||||||||| ||||    
T  36345021 ttcggcagttaactgccgaggggcatttgggtaaattactagtgtttctcagccaa 36344966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 344 - 447
Target Start/End: Complemental strand, 40075181 - 40075078
Alignment:
Q  344 cctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaatgtg 443  Q
    |||||| ||||||||||||||| |||    ||| ||||||| ||||||| ||| | |||||| ||||| |||||||||| ||||| || ||| |||||||    
T  40075181 cctcggtagttaactgcaaccgctttcttcaaaattcggcacttaactgtcgaagggcatttaagtaaattactcgtgtgtctcagcctaaccaaatgtg 40075082  T
Q  444 tcaa 447  Q
    ||||    
T  40075081 tcaa 40075078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 340 - 398
Target Start/End: Complemental strand, 34366964 - 34366906
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgagg 398  Q
    |||||||||| ||||||||||| |||| ||||  ||||||||||||||||||| |||||    
T  34366964 ttttcctcggaagttaactgcagccggatttataaaacttcggcagttaactgacgagg 34366906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 340 - 393
Target Start/End: Original strand, 30755692 - 30755745
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgc 393  Q
    |||||||||||||||||||||||||||||||| |   | |||||||||||||||    
T  30755692 ttttcctcggcagttaactgcaaccggttttatttttcctcggcagttaactgc 30755745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 340 - 397
Target Start/End: Complemental strand, 39601757 - 39601700
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgag 397  Q
    |||||||||||||||||||||| |||| |||   ||||||||||||||||||| ||||    
T  39601757 ttttcctcggcagttaactgcagccggatttctaaaacttcggcagttaactgtcgag 39601700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 378 - 447
Target Start/End: Complemental strand, 41858540 - 41858471
Alignment:
Q  378 ttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaatgtgtcaa 447  Q
    ||||||||||||||| ||||| |||||||  ||| |||||||||||||||| ||||  || |||||||||    
T  41858540 ttcggcagttaactgtcgaggggcatttggataaattactcgtgtttctcagccaatgtatatgtgtcaa 41858471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 340 - 452
Target Start/End: Complemental strand, 38330569 - 38330458
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaa 439  Q
    |||||||| | ||||||||||| |||||||||     | |||| |||||||||| |  |||||||| |||| |||||  ||||||||||||||||| |||    
T  38330569 ttttcctcagtagttaactgcagccggttttagacttcctcggtagttaactgcagcagagcattttagtattttacatgtgtttctcaaccaaac-aaa 38330471  T
Q  440 tgtgtcaatagca 452  Q
    |||||||| ||||    
T  38330470 tgtgtcaacagca 38330458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 340 - 396
Target Start/End: Complemental strand, 42602513 - 42602457
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccga 396  Q
    |||||||||||||||||||||| ||||||||   |  ||||||||||||||||||||    
T  42602513 ttttcctcggcagttaactgcatccggtttttgaattcttcggcagttaactgccga 42602457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 382 - 422
Target Start/End: Complemental strand, 43362334 - 43362294
Alignment:
Q  382 gcagttaactgccgaggagcatttgagtaatttactcgtgt 422  Q
    ||||||||||||||||  |||||||||||||||||||||||    
T  43362334 gcagttaactgccgagaggcatttgagtaatttactcgtgt 43362294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 340 - 422
Target Start/End: Original strand, 28618459 - 28618538
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgt 422  Q
    |||||||||||| ||||||||| ||||||| | |||  ||||||||||||||||||| | ||||||| |||| ||||| ||||    
T  28618459 ttttcctcggcatttaactgcagccggtttca-taa--ttcggcagttaactgccgaagggcatttgggtaaattacttgtgt 28618538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 379 - 422
Target Start/End: Complemental strand, 31184607 - 31184564
Alignment:
Q  379 tcggcagttaactgccgaggagcatttgagtaatttactcgtgt 422  Q
    |||||||||||||| ||||  |||||||||||||||||||||||    
T  31184607 tcggcagttaactgacgagaggcatttgagtaatttactcgtgt 31184564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 379 - 422
Target Start/End: Original strand, 31185504 - 31185547
Alignment:
Q  379 tcggcagttaactgccgaggagcatttgagtaatttactcgtgt 422  Q
    |||||| ||||||||||||| | |||||||||||||||||||||    
T  31185504 tcggcaattaactgccgaggggtatttgagtaatttactcgtgt 31185547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 340 - 447
Target Start/End: Complemental strand, 41471146 - 41471039
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaa 439  Q
    |||||||||  ||||||||||| ||| || |   ||| |||| |||||||||| ||| |  ||||||||||||||||||||||| |||  |||||  |||    
T  41471146 ttttcctcgaaagttaactgcagccgattctttaaaatttcgacagttaactgtcgaaggacatttgagtaatttactcgtgttactcggccaaatcaaa 41471047  T
Q  440 tgtgtcaa 447  Q
    ||||||||    
T  41471046 tgtgtcaa 41471039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 340 - 405
Target Start/End: Original strand, 10749694 - 10749759
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaa-cttcggcagttaactgccgaggagcattt 405  Q
    |||||||||||||||||||||  | ||||| |||||| |||||||||||||||||||| | ||||||    
T  10749694 ttttcctcggcagttaactgccgctggttt-actaaaacttcggcagttaactgccgaagggcattt 10749759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 343 - 405
Target Start/End: Complemental strand, 22547519 - 22547457
Alignment:
Q  343 tcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcattt 405  Q
    ||||||| ||||||||||| |||| |||   ||||||||||||||||||||||| | ||||||    
T  22547519 tcctcggtagttaactgcagccggatttctaaaacttcggcagttaactgccgaagggcattt 22547457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 378 - 444
Target Start/End: Original strand, 41472072 - 41472138
Alignment:
Q  378 ttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaatgtgt 444  Q
    ||||||||||||||| ||| | | ||||| |||| |||||||||||||||| |||||  ||||||||    
T  41472072 ttcggcagttaactgtcgaagggtatttgggtaaattactcgtgtttctcagccaaatcaaatgtgt 41472138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 341 - 434
Target Start/End: Original strand, 44934508 - 44934598
Alignment:
Q  341 tttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaa 434  Q
    |||||||||||| |||||||| ||||||| | |||  ||||| ||||||||| ||||| | ||||| |||| ||||| |||||||||| |||||    
T  44934508 tttcctcggcagataactgcagccggtttca-taa--ttcggtagttaactgtcgaggggtatttgggtaaattactagtgtttctcagccaaa 44934598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 351 - 428
Target Start/End: Complemental strand, 20854659 - 20854582
Alignment:
Q  351 agttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctca 428  Q
    ||||||||||  ||||||||   |||||||||||||||||||||||||  ||| |   ||| ||||||||||||||||    
T  20854659 agttaactgccgccggttttctaaaacttcggcagttaactgccgagggacatgtagataaattactcgtgtttctca 20854582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 422
Target Start/End: Original strand, 22014455 - 22014538
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttt--tactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgt 422  Q
    |||||||||||||||||||||  |||||||  ||  |||||||||||||| ||| |||| | ||||||  |||||||||||||||    
T  22014455 ttttcctcggcagttaactgccgccggtttccta-aaaacttcggcagtttactaccgaagggcatttccgtaatttactcgtgt 22014538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 332 - 433
Target Start/End: Complemental strand, 22960708 - 22960608
Alignment:
Q  332 agttttca-ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcattt-gagtaatttactcgtgtttctcaa 429  Q
    |||||||| |||||||| | ||||||||||| ||||||   | | | ||||||||||||||||||||  |||||| | |||| ||||||||||||||||     
T  22960708 agttttcagttttcctcagtagttaactgcagccggtt---ccataattcggcagttaactgccgagtggcatttggggtaaattactcgtgtttctcat 22960612  T
Q  430 ccaa 433  Q
    ||||    
T  22960611 ccaa 22960608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 447
Target Start/End: Original strand, 37328862 - 37328931
Alignment:
Q  378 ttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaatgtgtcaa 447  Q
    ||||||||||||||||||| || ||||| | ||  ||||| |||| ||||| |||||| |||||||||||    
T  37328862 ttcggcagttaactgccgaagaacatttaaatatcttacttgtgtgtctcagccaaaccaaatgtgtcaa 37328931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 378 - 422
Target Start/End: Complemental strand, 5532476 - 5532432
Alignment:
Q  378 ttcggcagttaactgccgaggagcatttgagtaatttactcgtgt 422  Q
    ||||||||||||||||||| | ||||||| |||| ||||||||||    
T  5532476 ttcggcagttaactgccgaagggcatttgggtaaattactcgtgt 5532432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 309 - 360
Target Start/End: Original strand, 12207116 - 12207165
Alignment:
Q  309 acccattgatgatgataattttgagttttcattttcctcggcagttaactgc 360  Q
    |||||||||||||||||||| ||||  |||||||| ||||| ||||||||||    
T  12207116 acccattgatgatgataattctgag--ttcatttttctcggtagttaactgc 12207165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 309 - 360
Target Start/End: Original strand, 12451544 - 12451593
Alignment:
Q  309 acccattgatgatgataattttgagttttcattttcctcggcagttaactgc 360  Q
    |||||||||||||||||||| ||||  |||||||| ||||| ||||||||||    
T  12451544 acccattgatgatgataattctgag--ttcatttttctcggtagttaactgc 12451593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 374 - 422
Target Start/End: Complemental strand, 22510566 - 22510518
Alignment:
Q  374 aaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgt 422  Q
    ||||||||||||||||||||||| | ||||||  ||| |||||||||||    
T  22510566 aaacttcggcagttaactgccgaagggcattttggtattttactcgtgt 22510518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #77
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 378 - 426
Target Start/End: Original strand, 40745339 - 40745387
Alignment:
Q  378 ttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttct 426  Q
    |||||||||||||||||||||  ||||||  ||| ||||||||||||||    
T  40745339 ttcggcagttaactgccgagggacatttggataaattactcgtgtttct 40745387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #78
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 340 - 400
Target Start/End: Complemental strand, 41855421 - 41855361
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggag 400  Q
    |||||||||||||||||||||| ||| ||||   |  ||||| ||||||||||||||||||    
T  41855421 ttttcctcggcagttaactgcagccgatttttgaattcttcgacagttaactgccgaggag 41855361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #79
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 342 - 398
Target Start/End: Original strand, 41858143 - 41858199
Alignment:
Q  342 ttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgagg 398  Q
    |||||||||||||||||||| ||||||||   |  ||||| ||||||||||||||||    
T  41858143 ttcctcggcagttaactgcagccggtttttgaattcttcgccagttaactgccgagg 41858199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #80
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 340 - 396
Target Start/End: Original strand, 44727525 - 44727580
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccga 396  Q
    |||||||||| ||||||||||| ||| |||| | |||||||||||||||| ||||||    
T  44727525 ttttcctcggtagttaactgcagccgttttttc-aaacttcggcagttaattgccga 44727580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 80; Significance: 2e-37; HSPs: 80)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 340 - 447
Target Start/End: Complemental strand, 20208563 - 20208456
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaa 439  Q
    |||||||||||||||||||||| |||||| || ||||||||||||||||||||||||||  |||||||||||||||||||||||||||| |||||| |||    
T  20208563 ttttcctcggcagttaactgcagccggttctagtaaacttcggcagttaactgccgagggacatttgagtaatttactcgtgtttctcagccaaaccaaa 20208464  T
Q  440 tgtgtcaa 447  Q
    ||||||||    
T  20208463 tgtgtcaa 20208456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 340 - 447
Target Start/End: Original strand, 18884524 - 18884631
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaa 439  Q
    |||| ||||||||||||||||| |||||||| | ||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| |||    
T  18884524 tttttctcggcagttaactgcagccggtttttcaaaatttcggcagttaactgccgaggggcatttgagtaatttactcgtgtttctcagccaaaccaaa 18884623  T
Q  440 tgtgtcaa 447  Q
    ||||||||    
T  18884624 tgtgtcaa 18884631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 340 - 443
Target Start/End: Original strand, 21022908 - 21023011
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaa 439  Q
    |||||||||||||||||||||| |||  |||   ||||||||||||||||||||||||| |||||||||||||||||||||||  | || |||||| |||    
T  21022908 ttttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgccgaggggcatttgagtaatttactcgtgtggcacagccaaaccaaa 21023007  T
Q  440 tgtg 443  Q
    ||||    
T  21023008 tgtg 21023011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 340 - 442
Target Start/End: Original strand, 48807406 - 48807508
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaa 439  Q
    |||||||| ||||||||||||| |||||| |   ||| |||| ||||||||||||||||  |||||||||||||||||||||||||||| |||||| |||    
T  48807406 ttttcctcagcagttaactgcagccggttctttaaaatttcgacagttaactgccgagggacatttgagtaatttactcgtgtttctcagccaaaccaaa 48807505  T
Q  440 tgt 442  Q
    |||    
T  48807506 tgt 48807508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 340 - 443
Target Start/End: Complemental strand, 46253536 - 46253436
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaa 439  Q
    |||||||||||||||||||||| ||||||| | |||  ||||||||||||||||||| | |||||||||||||||||||||||  | ||||||||||| |    
T  46253536 ttttcctcggcagttaactgcagccggtttca-taa--ttcggcagttaactgccgatgggcatttgagtaatttactcgtgtggcacaaccaaactata 46253440  T
Q  440 tgtg 443  Q
    ||||    
T  46253439 tgtg 46253436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 340 - 422
Target Start/End: Original strand, 14201550 - 14201629
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgt 422  Q
    |||||||||||||||||||||| ||||||| | |||  ||||||||||||||||||||| |||||||||||||||||||||||    
T  14201550 ttttcctcggcagttaactgcagccggtttca-taa--ttcggcagttaactgccgaggggcatttgagtaatttactcgtgt 14201629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 340 - 443
Target Start/End: Original strand, 51037488 - 51037591
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaa 439  Q
    ||||||||||||||||| |||| |||  |||   |||||||||||||||||||||||||  ||||||||||||||||||||||  | || ||||||||||    
T  51037488 ttttcctcggcagttaattgcagccgtatttctaaaacttcggcagttaactgccgagggacatttgagtaatttactcgtgtggcacagccaaactaaa 51037587  T
Q  440 tgtg 443  Q
    ||||    
T  51037588 tgtg 51037591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 341 - 447
Target Start/End: Original strand, 40061182 - 40061288
Alignment:
Q  341 tttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaat 440  Q
    ||||||||| ||||||||||||||||||||   |||||||||| |||||||||||| | ||||||  |||| |||||||||| ||||| |||||| ||||    
T  40061182 tttcctcggtagttaactgcaaccggttttctaaaacttcggcggttaactgccgatgggcatttaggtaaattactcgtgtgtctcagccaaaccaaat 40061281  T
Q  441 gtgtcaa 447  Q
     ||||||    
T  40061282 atgtcaa 40061288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 340 - 422
Target Start/End: Original strand, 40833630 - 40833712
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgt 422  Q
    |||||||||||||||||||||| |||  |||   ||||||||||||||||||||||||| | |||||||||||||||||||||    
T  40833630 ttttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgccgaggggtatttgagtaatttactcgtgt 40833712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 343 - 454
Target Start/End: Original strand, 28084013 - 28084122
Alignment:
Q  343 tcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaatgt 442  Q
    ||||||||||||||||||| | || |||   ||||||||||||||| ||||||||    |||||||||||||||| |||||||||| ||||||| |||||    
T  28084013 tcctcggcagttaactgcagctggatttctaaaacttcggcagttatctgccgagat--atttgagtaatttacttgtgtttctcagccaaactcaatgt 28084110  T
Q  443 gtcaatagcaat 454  Q
    ||||| ||||||    
T  28084111 gtcaagagcaat 28084122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 341 - 422
Target Start/End: Complemental strand, 31242268 - 31242186
Alignment:
Q  341 tttcctcggcagttaactgcaaccggttttactaaa--cttcggcagttaactgccgaggagcatttgagtaatttactcgtgt 422  Q
    ||||||||||||||||||||  ||||||| ||||||  |||||||||||||||||||| | |||||||||||||||||||||||    
T  31242268 tttcctcggcagttaactgccgccggttt-actaaaaacttcggcagttaactgccgaagggcatttgagtaatttactcgtgt 31242186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 339 - 443
Target Start/End: Original strand, 26792263 - 26792368
Alignment:
Q  339 attttcctcggcagttaactgcaaccggttttactaaa--cttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaact 436  Q
    ||||||||||||||||||||||  ||||||| ||||||  ||||||||||||| |||||| | |||||||||||||||||||||||  | || ||||||     
T  26792263 attttcctcggcagttaactgccgccggttt-actaaaaacttcggcagttaattgccgaagggcatttgagtaatttactcgtgtggcacagccaaacc 26792361  T
Q  437 aaatgtg 443  Q
    |||||||    
T  26792362 aaatgtg 26792368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 374 - 457
Target Start/End: Complemental strand, 40061120 - 40061037
Alignment:
Q  374 aaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaatgtgtcaatagcaatact 457  Q
    |||||||| |||||||||||||||| ||||||  |||| |||||||||| | ||| |||||||||||||||||| |||||||||    
T  40061120 aaacttcgacagttaactgccgaggggcatttaggtaaattactcgtgtgtttcagccaaactaaatgtgtcaacagcaatact 40061037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 340 - 447
Target Start/End: Original strand, 52469063 - 52469170
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaa 439  Q
    |||| |||| |||||||||||| ||||||  | |||||||||  |||||||||  |||| ||||||||||||||||||||||||||||| |||||  |||    
T  52469063 tttttctcgacagttaactgcagccggttcgagtaaacttcgatagttaactgttgaggggcatttgagtaatttactcgtgtttctcagccaaatcaaa 52469162  T
Q  440 tgtgtcaa 447  Q
    | ||||||    
T  52469163 tatgtcaa 52469170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 342 - 424
Target Start/End: Original strand, 37296207 - 37296289
Alignment:
Q  342 ttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgttt 424  Q
    |||||||||| ||||||||| |||||| |  |||| ||||||||||||||| ||| | |||||||||||||||||||||||||    
T  37296207 ttcctcggcaattaactgcagccggttcttttaaatttcggcagttaactgtcgaagggcatttgagtaatttactcgtgttt 37296289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 340 - 457
Target Start/End: Complemental strand, 27872432 - 27872315
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaa 439  Q
    ||||| |||||||||||| | | |||||| |   ||| ||||||||||||||||||| |   ||||||||||||||||||||||||||| |||||| |||    
T  27872432 ttttcttcggcagttaacggaagccggttctttaaaatttcggcagttaactgccgatggatatttgagtaatttactcgtgtttctcagccaaaccaaa 27872333  T
Q  440 tgtgtcaatagcaatact 457  Q
    | |||||| | |||||||    
T  27872332 tatgtcaacatcaatact 27872315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 340 - 417
Target Start/End: Complemental strand, 50447061 - 50446984
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttact 417  Q
    ||||||||| |||||||||||| |||  |||   ||||||||||||||||||||||| ||||||||||||||||||||    
T  50447061 ttttcctcgacagttaactgcagccgtatttttaaaacttcggcagttaactgccgaagagcatttgagtaatttact 50446984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 340 - 420
Target Start/End: Original strand, 38369202 - 38369282
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgt 420  Q
    |||||||||||||||||||||| |||  |||   ||||||||||||||||||||||| | | |||||||||||||||||||    
T  38369202 ttttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgccgaagggtatttgagtaatttactcgt 38369282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 379 - 454
Target Start/End: Complemental strand, 29306574 - 29306499
Alignment:
Q  379 tcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaatgtgtcaatagcaat 454  Q
    |||||||||||||||||||| ||||||| |||| ||||| |||||||||| |||||   |||||||||||||||||    
T  29306574 tcggcagttaactgccgaggggcatttgggtaaattactagtgtttctcagccaaaggtaatgtgtcaatagcaat 29306499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 378 - 457
Target Start/End: Complemental strand, 43175749 - 43175670
Alignment:
Q  378 ttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaatgtgtcaatagcaatact 457  Q
    |||||||| |||||||| | | ||||||||||||||||||| || |||||| |||||| ||||||||||| |||||||||    
T  43175749 ttcggcagctaactgcctaagggcatttgagtaatttactcatgcttctcagccaaaccaaatgtgtcaacagcaatact 43175670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 340 - 422
Target Start/End: Complemental strand, 14200614 - 14200532
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgt 422  Q
    |||||||||||||||||||||| |||  |||   |||||||| ||||||||||||||||   |||||||||||||||||||||    
T  14200614 ttttcctcggcagttaactgcagccgtatttctaaaacttcgacagttaactgccgagggatatttgagtaatttactcgtgt 14200532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 339 - 457
Target Start/End: Complemental strand, 48806539 - 48806421
Alignment:
Q  339 attttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaa 438  Q
    ||||||||||||||||||||||| |||||| |   ||| |||| ||||||||||||||   | |||||  ||| |||||||||||||||| |||||| ||    
T  48806539 attttcctcggcagttaactgcagccggttctttaaaatttcgacagttaactgccgaaaggtatttggataaattactcgtgtttctcagccaaaccaa 48806440  T
Q  439 atgtgtcaatagcaatact 457  Q
    |||||| || | |||||||    
T  48806439 atgtgtgaacaacaatact 48806421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 373 - 438
Target Start/End: Original strand, 18411202 - 18411267
Alignment:
Q  373 taaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaa 438  Q
    ||||||||| |||||||||| ||||| |||||| ||||||||||||||||||||||  ||||||||    
T  18411202 taaacttcgacagttaactgtcgaggggcatttaagtaatttactcgtgtttctcagtcaaactaa 18411267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 340 - 457
Target Start/End: Original strand, 43176648 - 43176765
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaa 439  Q
    |||||||||||||||||||||| | |||| |   ||| ||||||||||||||| ||| | | ||||  |||| |||||||||||||||| |||||| |||    
T  43176648 ttttcctcggcagttaactgcagcaggttctttaaaatttcggcagttaactgtcgaagggtatttaggtaaattactcgtgtttctcagccaaaccaaa 43176747  T
Q  440 tgtgtcaatagcaatact 457  Q
    ||||| || | |||||||    
T  43176748 tgtgtgaacaacaatact 43176765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 379 - 443
Target Start/End: Original strand, 29307521 - 29307585
Alignment:
Q  379 tcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaatgtg 443  Q
    |||||||||||||||  |||||||||||||||||||||||||||  | ||||||||| |||||||    
T  29307521 tcggcagttaactgctaaggagcatttgagtaatttactcgtgtggcacaaccaaaccaaatgtg 29307585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 340 - 422
Target Start/End: Original strand, 23221690 - 23221769
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgt 422  Q
    |||||||||||||||||||||| ||||||| | |||  ||||||||||||||||||| | |||||||| ||| ||||||||||    
T  23221690 ttttcctcggcagttaactgcagccggtttca-taa--ttcggcagttaactgccgaagggcatttgaataaattactcgtgt 23221769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 340 - 433
Target Start/End: Complemental strand, 35631216 - 35631126
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaa 433  Q
    |||||||||||||||||||||| ||||||   | | | |||||||||||||||||||   ||||||| |||| |||||| ||||||||||||||    
T  35631216 ttttcctcggcagttaactgcagccggtt---ccataattcggcagttaactgccgataggcatttgggtaaattactcttgtttctcaaccaa 35631126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 340 - 422
Target Start/End: Complemental strand, 40832696 - 40832617
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgt 422  Q
    |||||||| ||||||||||||| ||||||| | |||  || |||||||||||||||||| |||||||| ||||||||||||||    
T  40832696 ttttcctcagcagttaactgcagccggtttca-taa--tttggcagttaactgccgaggggcatttgaataatttactcgtgt 40832617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 340 - 422
Target Start/End: Complemental strand, 55587408 - 55587329
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgt 422  Q
    |||||||||||||||||||||| ||||||| | |||  ||||||||||||||||||| | ||||||| |||| ||||||||||    
T  55587408 ttttcctcggcagttaactgcagccggtttca-taa--ttcggcagttaactgccgaagggcatttgggtaaattactcgtgt 55587329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 340 - 422
Target Start/End: Original strand, 55588307 - 55588386
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgt 422  Q
    |||||||||||||||||||||| ||||||| | |||  ||||||||||||||||||| | ||||||| |||| ||||||||||    
T  55588307 ttttcctcggcagttaactgcagccggtttca-taa--ttcggcagttaactgccgaagggcatttgggtaaattactcgtgt 55588386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 340 - 398
Target Start/End: Original strand, 16984181 - 16984239
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgagg 398  Q
    |||||||||||||||||||||| |||| |||   |||||||||||||||||||||||||    
T  16984181 ttttcctcggcagttaactgcagccggatttctaaaacttcggcagttaactgccgagg 16984239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 340 - 422
Target Start/End: Complemental strand, 23220731 - 23220649
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgt 422  Q
    ||||| |||||||||||||||| |||  |||   ||||||||||||||||||||| | | | |||||||||||||||||||||    
T  23220731 ttttcatcggcagttaactgcagccgtatttctaaaacttcggcagttaactgccaaagggtatttgagtaatttactcgtgt 23220649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 342 - 428
Target Start/End: Complemental strand, 37855910 - 37855824
Alignment:
Q  342 ttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctca 428  Q
    |||||||||||||||||||| |||||| |   ||| ||||| ||||||||||||| ||  |||| ||||||||| ||||||||||||    
T  37855910 ttcctcggcagttaactgcagccggttctttaaaatttcggaagttaactgccgatgaatatttaagtaatttattcgtgtttctca 37855824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 338 - 435
Target Start/End: Complemental strand, 3403902 - 3403805
Alignment:
Q  338 cattttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaac 435  Q
    |||||||||||||||||||||||| |||| |||   |  | |||||||||||||||||| | | ||||| |||||||||| || ||||||| ||||||    
T  3403902 cattttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccgaagggtatttgcgtaatttacttgtatttctcagccaaac 3403805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 341 - 394
Target Start/End: Complemental strand, 44674216 - 44674163
Alignment:
Q  341 tttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgcc 394  Q
    ||||||||||||||||||||| |||| |||  ||||||||||||||||||||||    
T  44674216 tttcctcggcagttaactgcagccgggtttcttaaacttcggcagttaactgcc 44674163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 340 - 443
Target Start/End: Original strand, 3408260 - 3408364
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaactt-cggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaa 438  Q
    |||||||||||||||||||||  ||||||  || ||| || |||||||| |||| ||| | |||||||||||||||||||||||    ||||||||| ||    
T  3408260 ttttcctcggcagttaactgccgccggttgcacaaaaatttcggcagtttactgtcgaagggcatttgagtaatttactcgtgtggtacaaccaaaccaa 3408359  T
Q  439 atgtg 443  Q
    |||||    
T  3408360 atgtg 3408364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 340 - 428
Target Start/End: Complemental strand, 4783699 - 4783611
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctca 428  Q
    ||||||||||||||||||||||| ||||||    | | ||||  ||||||||||||||  | |||||||||| ||||||||||||||||    
T  4783699 ttttcctcggcagttaactgcaatcggtttcttcagaattcgaaagttaactgccgagaggtatttgagtaaattactcgtgtttctca 4783611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 342 - 422
Target Start/End: Original strand, 7485683 - 7485763
Alignment:
Q  342 ttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgt 422  Q
    ||||||||||||||| |||| |||  |||   |||||||| |||||||||||||||| ||||||| |||| ||||||||||    
T  7485683 ttcctcggcagttaattgcagccgtatttctaaaacttcgacagttaactgccgaggggcatttgggtaaattactcgtgt 7485763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 344 - 420
Target Start/End: Complemental strand, 21015788 - 21015712
Alignment:
Q  344 cctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgt 420  Q
    |||| ||||||||||||| |||  |||   |||||||| |||||||||||||||| | |||||||||||||||||||    
T  21015788 cctcagcagttaactgcacccgtatttctaaaacttcgacagttaactgccgaggggtatttgagtaatttactcgt 21015712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 332 - 433
Target Start/End: Complemental strand, 40963013 - 40962914
Alignment:
Q  332 agttttca-ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaac 430  Q
    |||||||| |||||||||| ||||||||||| ||||||   | | | ||||||||| ||||||| ||| ||||||| |||| |||||||||||||||| |    
T  40963013 agttttcagttttcctcggtagttaactgcagccggtt---ccataattcggcagtcaactgccaaggggcatttgggtaaattactcgtgtttctcagc 40962917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 340 - 400
Target Start/End: Complemental strand, 49889736 - 49889676
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggag 400  Q
    ||||||||||||||||||||||||| | |||   |||||||| ||||||||||||||||||    
T  49889736 ttttcctcggcagttaactgcaaccagatttctaaaacttcgacagttaactgccgaggag 49889676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 353 - 457
Target Start/End: Original strand, 50023580 - 50023684
Alignment:
Q  353 ttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaatgtgtcaatagca 452  Q
    ||||||||| ||| ||||   |||||| |||||||||||||||||| ||||||   ||| ||||| |||| ||||| ||||||||||| |||||  ||||    
T  50023580 ttaactgcagccgattttctaaaactttggcagttaactgccgaggggcatttagataaattacttgtgtgtctcagccaaactaaatttgtcatcagca 50023679  T
Q  453 atact 457  Q
    |||||    
T  50023680 atact 50023684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 353 - 457
Target Start/End: Original strand, 50030698 - 50030802
Alignment:
Q  353 ttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaatgtgtcaatagca 452  Q
    ||||||||| ||| ||||   |||||| |||||||||||||||||| ||||||   ||| ||||| |||| ||||| ||||||||||| |||||  ||||    
T  50030698 ttaactgcagccgattttctaaaactttggcagttaactgccgaggggcatttagataaattacttgtgtgtctcagccaaactaaatttgtcatcagca 50030797  T
Q  453 atact 457  Q
    |||||    
T  50030798 atact 50030802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 384 - 447
Target Start/End: Complemental strand, 18411207 - 18411144
Alignment:
Q  384 agttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaatgtgtcaa 447  Q
    |||| |||||||||   ||||||| |||||||||||||||||||| |||||| |||||||||||    
T  18411207 agtttactgccgagagacatttgaataatttactcgtgtttctcagccaaaccaaatgtgtcaa 18411144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 340 - 422
Target Start/End: Original strand, 28235581 - 28235663
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaa-cttcggcagttaactgccgaggagcatttgagtaatttactcgtgt 422  Q
    |||||||||||||||||||||  ||||||| |||||| |||||||||||||||||||| | ||||||  ||||  |||||||||    
T  28235581 ttttcctcggcagttaactgccgccggttt-actaaaacttcggcagttaactgccgaagggcattttcgtaaaatactcgtgt 28235663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 378 - 433
Target Start/End: Original strand, 28322175 - 28322230
Alignment:
Q  378 ttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaa 433  Q
    |||||||||||||| ||||||  ||||||||||| |||||||||||||||| ||||    
T  28322175 ttcggcagttaactaccgagggacatttgagtaaattactcgtgtttctcagccaa 28322230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 340 - 443
Target Start/End: Complemental strand, 51036556 - 51036453
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaa 439  Q
    ||||||||||||||||||| || |||  |||   |||||||| ||| |||||| ||||| ||||||| |||| ||||| ||||||||||  ||||| |||    
T  51036556 ttttcctcggcagttaactacagccgtatttctaaaacttcgacagctaactgtcgaggggcatttgggtaaattactagtgtttctcaggcaaaccaaa 51036457  T
Q  440 tgtg 443  Q
    ||||    
T  51036456 tgtg 51036453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 377 - 447
Target Start/End: Complemental strand, 37295279 - 37295209
Alignment:
Q  377 cttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaatgtgtcaa 447  Q
    |||| ||||||||||||||||| ||||||| |||| ||||| |||||||||| |||||   ||||||||||    
T  37295279 cttctgcagttaactgccgaggggcatttgggtaaattactagtgtttctcagccaaatgtaatgtgtcaa 37295209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 351 - 457
Target Start/End: Complemental strand, 50020159 - 50020053
Alignment:
Q  351 agttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaatgtgtcaatag 450  Q
    ||||||||||||||| ||||   |||||||||||||||||| || | | ||||||   ||| |||||||||| |||||  ||||| ||||||||||| |     
T  50020159 agttaactgcaaccgattttctaaaacttcggcagttaactaccaaagggcatttagataaattactcgtgtgtctcattcaaaccaaatgtgtcaacaa 50020060  T
Q  451 caatact 457  Q
    |||||||    
T  50020059 caatact 50020053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 386 - 447
Target Start/End: Original strand, 2449674 - 2449735
Alignment:
Q  386 ttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaatgtgtcaa 447  Q
    |||||||||||||  |||||||||||||||||||||||| ||  | |||| |||||||||||    
T  2449674 ttaactgccgagggacatttgagtaatttactcgtgtttatcggctaaaccaaatgtgtcaa 2449735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 340 - 457
Target Start/End: Complemental strand, 11565919 - 11565802
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaa 439  Q
    ||||||||| |||||||||||| |||||| |    || ||||||| ||||| ||| |    ||||||| |||||||||||||||||| | |||||| |||    
T  11565919 ttttcctcgacagttaactgcagccggttctttagaatttcggcaattaaccgccaaaagacatttgaataatttactcgtgtttctaagccaaaccaaa 11565820  T
Q  440 tgtgtcaatagcaatact 457  Q
    |||||||| | |||||||    
T  11565819 tgtgtcaacaacaatact 11565802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 339 - 396
Target Start/End: Complemental strand, 28081512 - 28081455
Alignment:
Q  339 attttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccga 396  Q
    |||||||||||||||||||||||  ||| |||   |||||||||||||||||||||||    
T  28081512 attttcctcggcagttaactgcagtcggatttctaaaacttcggcagttaactgccga 28081455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 343 - 428
Target Start/End: Original strand, 51429326 - 51429411
Alignment:
Q  343 tcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctca 428  Q
    |||||| |||||||||||| |||||||  | ||| ||||||||||||||  ||||||| ||||  |||| ||||| ||||||||||    
T  51429326 tcctcgacagttaactgcagccggtttctccaaaattcggcagttaactctcgaggagtatttatgtaaattactggtgtttctca 51429411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 340 - 396
Target Start/End: Complemental strand, 55793973 - 55793916
Alignment:
Q  340 ttttcctcggcagttaactgcaaccgg-ttttactaaacttcggcagttaactgccga 396  Q
    |||||||||||||||||||||| |||| |||| | ||| |||||||||||||||||||    
T  55793973 ttttcctcggcagttaactgcagccggatttttcaaaatttcggcagttaactgccga 55793916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 343 - 447
Target Start/End: Original strand, 8111438 - 8111542
Alignment:
Q  343 tcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaatgt 442  Q
    ||||||| ||||||||||| |||||||    |||||||| || ||||||||||| |  |||||   ||| |||||||||| ||||| |||||| ||||||    
T  8111438 tcctcggtagttaactgcagccggtttccacaaacttcgacaattaactgccgatggacatttagataaattactcgtgtatctcagccaaaccaaatgt 8111537  T
Q  443 gtcaa 447  Q
    |||||    
T  8111538 gtcaa 8111542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 378 - 454
Target Start/End: Original strand, 9013927 - 9014003
Alignment:
Q  378 ttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaatgtgtcaatagcaat 454  Q
    ||||||||||||||||||| | | ||||  |||| |||||||||| ||||| || ||| ||||||||||| ||||||    
T  9013927 ttcggcagttaactgccgaagggaatttaggtaaattactcgtgtgtctcagcctaaccaaatgtgtcaacagcaat 9014003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 351 - 447
Target Start/End: Complemental strand, 30704060 - 30703964
Alignment:
Q  351 agttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaatgtgtcaa 447  Q
    ||||||||||| |||||||    ||| || ||||||||||||||||   |||||| ||||| |||||||||| ||||| || ||| |||||||||||    
T  30704060 agttaactgcagccggtttccacaaaatttggcagttaactgccgaatggcatttaagtaaattactcgtgtgtctcagcctaaccaaatgtgtcaa 30703964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 340 - 443
Target Start/End: Complemental strand, 38368281 - 38368181
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaa 439  Q
    |||||||||||||||||||||| ||||||| | |||  ||||||||||||||||||| |  ||||||  ||| ||||||||||  |  | ||||||||||    
T  38368281 ttttcctcggcagttaactgcagccggtttca-taa--ttcggcagttaactgccgaaggacatttggataaattactcgtgtggcatagccaaactaaa 38368185  T
Q  440 tgtg 443  Q
    ||||    
T  38368184 tgtg 38368181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 340 - 422
Target Start/End: Original strand, 16473700 - 16473782
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaa-cttcggcagttaactgccgaggagcatttgagtaatttactcgtgt 422  Q
    |||||||||| ||||||||||  ||||||| |||||| |||||||||||||||||||| | ||||||  ||||  |||||||||    
T  16473700 ttttcctcggtagttaactgccgccggttt-actaaaacttcggcagttaactgccgaagggcattttcgtaaagtactcgtgt 16473782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 378 - 433
Target Start/End: Complemental strand, 28157596 - 28157541
Alignment:
Q  378 ttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaa 433  Q
    |||||||||||| |||||||| |||||||  ||| |||||||||||||||| ||||    
T  28157596 ttcggcagttaattgccgaggggcatttggataaattactcgtgtttctcagccaa 28157541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 378 - 433
Target Start/End: Original strand, 33812880 - 33812935
Alignment:
Q  378 ttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaa 433  Q
    ||||||||||||||||||||   |||||| |||| |||||| ||||||||||||||    
T  33812880 ttcggcagttaactgccgagtgacatttgggtaaattactcatgtttctcaaccaa 33812935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 340 - 439
Target Start/End: Original strand, 46254468 - 46254567
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaa 439  Q
    |||||||||||||||||||||| |||  |||   |||||||||||||||||| |||||    |||||| ||||||||| ||||  | || ||||||||||    
T  46254468 ttttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactaccgagagatatttgaataatttacttgtgtggcacagccaaactaaa 46254567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 340 - 370
Target Start/End: Original strand, 958614 - 958644
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggtttt 370  Q
    |||||||||||||||||||||||||||||||    
T  958614 ttttcctcggcagttaactgcaaccggtttt 958644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 378 - 424
Target Start/End: Original strand, 9655964 - 9656010
Alignment:
Q  378 ttcggcagttaactgccgaggagcatttgagtaatttactcgtgttt 424  Q
    ||||||||||||||||||||| ||||||| |||| |||||| |||||    
T  9655964 ttcggcagttaactgccgaggggcatttgggtaaattactcatgttt 9656010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 340 - 398
Target Start/End: Complemental strand, 16983575 - 16983517
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgagg 398  Q
    |||| ||||||||||||||| | |||| |||   |||||||||||||||||||||||||    
T  16983575 tttttctcggcagttaactgtagccggatttctaaaacttcggcagttaactgccgagg 16983517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 340 - 443
Target Start/End: Complemental strand, 26932637 - 26932533
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttact--aaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaacta 437  Q
    ||||||||||||||||||| |  |||||| | ||  |||||||||||||| ||| |||| |  ||||||||||||||||||||||  | || ||||||||    
T  26932637 ttttcctcggcagttaactaccgccggttgt-ctaaaaacttcggcagtttactaccgaaggacatttgagtaatttactcgtgtgacacagccaaacta 26932539  T
Q  438 aatgtg 443  Q
     |||||    
T  26932538 tatgtg 26932533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 412 - 454
Target Start/End: Original strand, 55407873 - 55407915
Alignment:
Q  412 tttactcgtgtttctcaaccaaactaaatgtgtcaatagcaat 454  Q
    ||||||||||||||||| || ||| ||||||||||||||||||    
T  55407873 tttactcgtgtttctcagcctaaccaaatgtgtcaatagcaat 55407915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 374 - 443
Target Start/End: Original strand, 1309169 - 1309238
Alignment:
Q  374 aaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaatgtg 443  Q
    ||||||||||||||||||||||| | ||||||  ||| |||||||||||  | |||||| |||| |||||    
T  1309169 aaacttcggcagttaactgccgaagggcatttttgtattttactcgtgtggcacaaccatactatatgtg 1309238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 396
Target Start/End: Original strand, 6178130 - 6178187
Alignment:
Q  340 ttttcctcggcagttaactgcaaccgg-ttttactaaacttcggcagttaactgccga 396  Q
    |||||||||||||||||||||| |||| ||| |  ||| |||||||||||||||||||    
T  6178130 ttttcctcggcagttaactgcagccggatttgagaaaatttcggcagttaactgccga 6178187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 379 - 435
Target Start/End: Original strand, 15999858 - 15999915
Alignment:
Q  379 tcggcagttaactgccga-ggagcatttgagtaatttactcgtgtttctcaaccaaac 435  Q
    |||||||||||||||||| || | ||||| |||||||||| |||||||||| ||||||    
T  15999858 tcggcagttaactgccgagggggtatttgggtaatttacttgtgtttctcagccaaac 15999915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 427
Target Start/End: Original strand, 21343397 - 21343481
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctc 427  Q
    |||||||||| ||||||||| | |||||| |||   | ||||||||||||||||||||    ||||||||||  ||||||||||||||    
T  21343397 ttttcctcggtagttaactgtagccggttctac---atttcggcagttaactgccgagagatatttgagtaaactactcgtgtttctc 21343481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 396
Target Start/End: Original strand, 40354599 - 40354652
Alignment:
Q  343 tcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccga 396  Q
    ||||||||| ||||||||| |||| ||| | ||| |||||||||||||||||||    
T  40354599 tcctcggcaattaactgcagccggattttcaaaatttcggcagttaactgccga 40354652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 396
Target Start/End: Original strand, 41795376 - 41795433
Alignment:
Q  340 ttttcctcggcagttaactgcaaccgg-ttttactaaacttcggcagttaactgccga 396  Q
    |||||||||||||||||||||| |||| ||| |  ||| |||||||||||||||||||    
T  41795376 ttttcctcggcagttaactgcagccggatttgagaaaatttcggcagttaactgccga 41795433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 396
Target Start/End: Complemental strand, 49094137 - 49094080
Alignment:
Q  340 ttttcctcggcagttaactgcaaccgg-ttttactaaacttcggcagttaactgccga 396  Q
    |||||||||||||||||||||| |||| ||| |  ||| |||||||||||||||||||    
T  49094137 ttttcctcggcagttaactgcagccggatttgagaaaatttcggcagttaactgccga 49094080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 374 - 447
Target Start/End: Original strand, 50196964 - 50197037
Alignment:
Q  374 aaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaatgtgtcaa 447  Q
    ||||||||| ||||||||||||||| ||||||  |||| ||| |||||| ||| | |||||  |||||||||||    
T  50196964 aaacttcggtagttaactgccgaggggcatttaggtaaattattcgtgtgtcttagccaaatcaaatgtgtcaa 50197037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 342 - 370
Target Start/End: Complemental strand, 2449027 - 2448999
Alignment:
Q  342 ttcctcggcagttaactgcaaccggtttt 370  Q
    |||||||||||||||||||||||||||||    
T  2449027 ttcctcggcagttaactgcaaccggtttt 2448999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 374 - 422
Target Start/End: Original strand, 6181846 - 6181894
Alignment:
Q  374 aaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgt 422  Q
    ||||||||||||||||||||||| | ||||||  ||| |||||||||||    
T  6181846 aaacttcggcagttaactgccgaagggcattttggtattttactcgtgt 6181894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 378 - 422
Target Start/End: Complemental strand, 7484745 - 7484701
Alignment:
Q  378 ttcggcagttaactgccgaggagcatttgagtaatttactcgtgt 422  Q
    ||||||||||||||||||||| |||||||  ||| ||||||||||    
T  7484745 ttcggcagttaactgccgaggggcatttggataaattactcgtgt 7484701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 340 - 444
Target Start/End: Original strand, 37856764 - 37856868
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaa 439  Q
    ||||||||||||  |||||||| |||||| |   ||| ||||||||||||||||| | |   ||||  |||| |||||||||||||| | |||||| |||    
T  37856764 ttttcctcggcacctaactgcagccggttctttaaaatttcggcagttaactgccaaaggatatttaggtaaattactcgtgtttcttagccaaaccaaa 37856863  T
Q  440 tgtgt 444  Q
    |||||    
T  37856864 tgtgt 37856868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 374 - 422
Target Start/End: Complemental strand, 49090465 - 49090417
Alignment:
Q  374 aaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgt 422  Q
    ||||||||||||||||||||||| | ||||||  ||| |||||||||||    
T  49090465 aaacttcggcagttaactgccgaagggcattttggtattttactcgtgt 49090417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 77; Significance: 2e-35; HSPs: 69)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 338 - 454
Target Start/End: Original strand, 49429153 - 49429269
Alignment:
Q  338 cattttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaacta 437  Q
    ||||||||||||||  |||||||| |||| |||   ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||     
T  49429153 cattttcctcggcaactaactgcagccggatttctaaaacttcggcagttaactgccgaagagcatttgagtaatttactcgtgtttcacaaccaaactc 49429252  T
Q  438 aatgtgtcaatagcaat 454  Q
    |||||||||||||||||    
T  49429253 aatgtgtcaatagcaat 49429269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 315 - 454
Target Start/End: Complemental strand, 50036925 - 50036786
Alignment:
Q  315 tgatgatgataattttgagttttcattttcctcggcagttaactgcaaccggttt-tactaaacttcggcagttaactgccgaggagcatttgagtaatt 413  Q
    |||||||||||||| || |||||||||||| |||| ||||||||||| |||| || ||  |||||||||||||||||||||||||  |||||||||||||    
T  50036925 tgatgatgataattctg-gttttcattttcttcggtagttaactgcagccgggttctagaaaacttcggcagttaactgccgagggacatttgagtaatt 50036827  T
Q  414 tactcgtgtttctcaaccaaactaaatgtgtcaatagcaat 454  Q
    |||| |||||||||| |||||  ||||||||||| ||||||    
T  50036826 tacttgtgtttctcagccaaatcaaatgtgtcaacagcaat 50036786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 340 - 457
Target Start/End: Original strand, 13761064 - 13761181
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaa 439  Q
    |||||||||||||||||||||| |||||| |   ||| |  |||||||||||||||||| ||||||||||||||||||||||||||||| |||||| |||    
T  13761064 ttttcctcggcagttaactgcagccggttctttaaaattgaggcagttaactgccgaggggcatttgagtaatttactcgtgtttctcatccaaaccaaa 13761163  T
Q  440 tgtgtcaatagcaatact 457  Q
    |||||||| | |||||||    
T  13761164 tgtgtcaacaacaatact 13761181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 332 - 428
Target Start/End: Original strand, 19915330 - 19915423
Alignment:
Q  332 agttttcattttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctca 428  Q
    |||||| ||||||||||||||||||||||| ||||||| | |||  ||||||||||||||||||| | |||||||||||||||||||||||||||||    
T  19915330 agttttaattttcctcggcagttaactgcagccggtttca-taa--ttcggcagttaactgccgaagggcatttgagtaatttactcgtgtttctca 19915423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 345 - 440
Target Start/End: Complemental strand, 42290344 - 42290249
Alignment:
Q  345 ctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaat 440  Q
    |||| |||||||||||| ||| ||||   ||| ||||||||||||||||| ||| ||||||||||||||||||||||||| ||||||||| |||||    
T  42290344 ctcgacagttaactgcagccgattttttaaaatttcggcagttaactgccaaggggcatttgagtaatttactcgtgtttatcaaccaaattaaat 42290249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 340 - 422
Target Start/End: Complemental strand, 19914519 - 19914437
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgt 422  Q
    |||||||||||||||||||||| |||  |||   ||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  19914519 ttttcctcggcagttaactgcagccgtatttctaaaacttcggaagttaactgccgaggggcatttgagtaatttactcgtgt 19914437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 340 - 447
Target Start/End: Original strand, 47653727 - 47653831
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaa 439  Q
    |||||||||||||||||||||| ||||||||| |||  ||||||||||||||||||||  ||||||| |||| ||||| |||||||||| |||||   ||    
T  47653727 ttttcctcggcagttaactgcagccggtttta-taa--ttcggcagttaactgccgagaggcatttgggtaaattacttgtgtttctcagccaaaggtaa 47653823  T
Q  440 tgtgtcaa 447  Q
    ||||||||    
T  47653824 tgtgtcaa 47653831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 344 - 447
Target Start/End: Complemental strand, 4208445 - 4208342
Alignment:
Q  344 cctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaatgtg 443  Q
    |||||||||||||||||| ||||||     ||| ||||||||||||||||||| |   |||||||||| ||||||||||||||||| ||||| |||||||    
T  4208445 cctcggcagttaactgcagccggttccttcaaaattcggcagttaactgccgaaggatatttgagtaaattactcgtgtttctcaatcaaaccaaatgtg 4208346  T
Q  444 tcaa 447  Q
    ||||    
T  4208345 tcaa 4208342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 342 - 445
Target Start/End: Complemental strand, 7943025 - 7942922
Alignment:
Q  342 ttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaatg 441  Q
    |||||||||||||||||||| ||| || |  |||| || |||||||||||||||||||  ||||||||||||||||| ||||| ||| |||||  |||||    
T  7943025 ttcctcggcagttaactgcagccgattcttttaaattttggcagttaactgccgaggaaaatttgagtaatttactcatgtttttcagccaaatcaaatg 7942926  T
Q  442 tgtc 445  Q
    ||||    
T  7942925 tgtc 7942922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 340 - 443
Target Start/End: Complemental strand, 19161945 - 19161842
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaa 439  Q
    |||||||||||||||||||||| |||| |||   |||||||||||||||||||||||   ||||||||||||||||||| |||  | || |||||| |||    
T  19161945 ttttcctcggcagttaactgcagccggatttctaaaacttcggcagttaactgccgaaaggcatttgagtaatttactcttgtggcacagccaaaccaaa 19161846  T
Q  440 tgtg 443  Q
    ||||    
T  19161845 tgtg 19161842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 340 - 454
Target Start/End: Complemental strand, 49660876 - 49660765
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaa 439  Q
    |||||||||||||||||||||| || |||| | |||  ||||||||||||||||| ||||||||||| |||| ||||| |||||||||| |||||   ||    
T  49660876 ttttcctcggcagttaactgcagccagtttca-taa--ttcggcagttaactgccaaggagcatttgggtaaattactagtgtttctcagccaaaggtaa 49660780  T
Q  440 tgtgtcaatagcaat 454  Q
    |||||||| ||||||    
T  49660779 tgtgtcaacagcaat 49660765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 340 - 422
Target Start/End: Original strand, 586625 - 586707
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgt 422  Q
    |||||||||||||||||||||| |||  |||   ||||||||||||||||||||||| | | |||||||||||||||||||||    
T  586625 ttttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgccgaagggtatttgagtaatttactcgtgt 586707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 340 - 422
Target Start/End: Complemental strand, 30194474 - 30194392
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgt 422  Q
    |||||||||||||||||||||| |||  |||   ||||||||||||||||||||||| | | |||||||||||||||||||||    
T  30194474 ttttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgccgaagggtatttgagtaatttactcgtgt 30194392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 346 - 436
Target Start/End: Original strand, 48228328 - 48228418
Alignment:
Q  346 tcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaact 436  Q
    |||||||||||||||| || | |||   ||||||||||||||||||||||| |  |||||||||||||||||||||||| ||| |||||||    
T  48228328 tcggcagttaactgcagccagatttctaaaacttcggcagttaactgccgaaggacatttgagtaatttactcgtgtttttcagccaaact 48228418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 340 - 443
Target Start/End: Complemental strand, 4883286 - 4883183
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaa 439  Q
    |||||||||||||||||||||| |||  |||   |||||||||||||||||||  |||| | |||||||||||||||||||||  | || |||||| |||    
T  4883286 ttttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgttgaggggtatttgagtaatttactcgtgtgacacagccaaaccaaa 4883187  T
Q  440 tgtg 443  Q
    ||||    
T  4883186 tgtg 4883183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 342 - 457
Target Start/End: Complemental strand, 5329174 - 5329059
Alignment:
Q  342 ttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaatg 441  Q
    ||||||||||||||||||||||||||| |   ||| |||||||||||||||| ||   | ||||| |||| ||| |||||||||||| |||||| |||||    
T  5329174 ttcctcggcagttaactgcaaccggttctttaaaatttcggcagttaactgctgaatggtatttgggtaaattattcgtgtttctcagccaaaccaaatg 5329075  T
Q  442 tgtcaatagcaatact 457  Q
    ||| || | |||||||    
T  5329074 tgtgaacaacaatact 5329059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 342 - 457
Target Start/End: Complemental strand, 12627290 - 12627175
Alignment:
Q  342 ttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaatg 441  Q
    |||||||||||||||||||| |||||| |   ||| ||||||| |||||| |||| | | ||||| |||| |||||||||||||||| |||||| |||||    
T  12627290 ttcctcggcagttaactgcacccggttctttaaaatttcggcaattaactaccgaagggtatttgggtaaattactcgtgtttctcagccaaaccaaatg 12627191  T
Q  442 tgtcaatagcaatact 457  Q
    ||| || | |||||||    
T  12627190 tgtgaacaacaatact 12627175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 340 - 398
Target Start/End: Original strand, 29765549 - 29765607
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgagg 398  Q
    ||||||||||||||||||||||||||| |||   |||||||||||||||||||||||||    
T  29765549 ttttcctcggcagttaactgcaaccggatttctaaaacttcggcagttaactgccgagg 29765607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 340 - 457
Target Start/End: Original strand, 5330034 - 5330150
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaa 439  Q
    |||||||||||| ||||||||| || ||| |   ||| ||||   |||||||||||| ||  ||||||||||||||||||||||||||| |||||| |||    
T  5330034 ttttcctcggcaattaactgcagccagttctttaaaatttcgattgttaactgccgaagaatatttgagtaatttactcgtgtttctcagccaaac-aaa 5330132  T
Q  440 tgtgtcaatagcaatact 457  Q
    |||||||| || ||||||    
T  5330133 tgtgtcaaaaggaatact 5330150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 332 - 454
Target Start/End: Original strand, 51461864 - 51461984
Alignment:
Q  332 agttttca-ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaac 430  Q
    |||||||| |||||||||| ||||||||||| ||||||  || |   ||||||||||||||||||||  ||||||| |||| |||||||||||||||| |    
T  51461864 agttttcagttttcctcggtagttaactgcagccggttccacaa---ttcggcagttaactgccgagtggcatttgggtaaattactcgtgtttctcagc 51461960  T
Q  431 caaactaaatgtgtcaatagcaat 454  Q
    |||   | ||||||||||| ||||    
T  51461961 caatgcatatgtgtcaataacaat 51461984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 340 - 447
Target Start/End: Original strand, 21700866 - 21700970
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaa 439  Q
    |||||||||||||||||||||| ||||||| | |||  ||||||||||||||||  ||| ||||||| |||| ||||| |||||||||| |||||   ||    
T  21700866 ttttcctcggcagttaactgcagccggtttca-taa--ttcggcagttaactgcttaggggcatttgggtaaattactagtgtttctcagccaaaggtaa 21700962  T
Q  440 tgtgtcaa 447  Q
    ||||||||    
T  21700963 tgtgtcaa 21700970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 340 - 428
Target Start/End: Complemental strand, 29424433 - 29424345
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctca 428  Q
    |||||||||| ||||||||||| ||||||||  |||||||||||| ||||||||||| | ||||||  ||||  |||| ||||||||||    
T  29424433 ttttcctcggtagttaactgcagccggtttttttaaacttcggcaattaactgccgaagggcattttcgtaaagtactagtgtttctca 29424345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 340 - 422
Target Start/End: Original strand, 30195407 - 30195486
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgt 422  Q
    |||||||||||||||||||||| ||||||| | |||  |||  |||||||||||||| | |||||||||||||||||||||||    
T  30195407 ttttcctcggcagttaactgcagccggtttca-taa--ttcaacagttaactgccgaagggcatttgagtaatttactcgtgt 30195486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 340 - 454
Target Start/End: Original strand, 44470031 - 44470145
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaa 439  Q
    |||||||||||||||||||||| |||| |||   |  | |||||||||||||||||||| | |||||  |||||||   |||||||||| |||||| | |    
T  44470031 ttttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccgaggggtatttggataatttaaatgtgtttctcagccaaacaaca 44470130  T
Q  440 tgtgtcaatagcaat 454  Q
    |||||||| ||||||    
T  44470131 tgtgtcaacagcaat 44470145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 338 - 435
Target Start/End: Complemental strand, 41453893 - 41453796
Alignment:
Q  338 cattttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaac 435  Q
    |||||||||||||||||||||||| |||| |||   |  | ||||||||||||| |||||| |  |||| |||||||||| |||||||||| ||||||    
T  41453893 cattttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactaccgaggggtgtttgcgtaatttactagtgtttctcagccaaac 41453796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 346 - 447
Target Start/End: Original strand, 50343994 - 50344095
Alignment:
Q  346 tcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaatgtgtc 445  Q
    |||| ||||||||||  ||||||||   ||||||||||||||||||||||| ||||||||  |||| ||||||| || ||||| | ||||  ||||||||    
T  50343994 tcgggagttaactgccgccggttttctaaaacttcggcagttaactgccgatgagcatttaggtaaattactcgcgtgtctcagctaaacctaatgtgtc 50344093  T
Q  446 aa 447  Q
    ||    
T  50344094 aa 50344095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 378 - 454
Target Start/End: Complemental strand, 26769181 - 26769105
Alignment:
Q  378 ttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaatgtgtcaatagcaat 454  Q
    ||||||||||||||||||||    |||||||||| |||||||||||||||| ||||   | ||||||||||||||||    
T  26769181 ttcggcagttaactgccgagagatatttgagtaaattactcgtgtttctcagccaatgcatatgtgtcaatagcaat 26769105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 340 - 428
Target Start/End: Original strand, 29425356 - 29425444
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctca 428  Q
    |||||||||| ||||||||||||||| ||||   |||||||| |||||||||||||| | ||||||  ||||  |||| ||||||||||    
T  29425356 ttttcctcggtagttaactgcaaccgattttttcaaacttcgacagttaactgccgaagggcattttcgtaaagtactagtgtttctca 29425444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 315 - 371
Target Start/End: Complemental strand, 36183973 - 36183918
Alignment:
Q  315 tgatgatgataattttgagttttcattttcctcggcagttaactgcaaccggtttta 371  Q
    ||||||||||||||||| |||||||||||| |||||||||||||||  |||||||||    
T  36183973 tgatgatgataattttg-gttttcattttcttcggcagttaactgctgccggtttta 36183918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 332 - 433
Target Start/End: Original strand, 45780920 - 45781019
Alignment:
Q  332 agttttca-ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaac 430  Q
    |||||||| |||||||||| ||||||||||| ||||||   | | | |||| |||||||||| ||||| ||||||| |||| |||||||||||||||| |    
T  45780920 agttttcagttttcctcggtagttaactgcagccggtt---ccataattcgacagttaactgacgaggggcatttgggtaaattactcgtgtttctcagc 45781016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 378 - 426
Target Start/End: Complemental strand, 49502119 - 49502071
Alignment:
Q  378 ttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttct 426  Q
    ||||||||||||||||||||||||||||  |||| ||||||||||||||    
T  49502119 ttcggcagttaactgccgaggagcatttaggtaaattactcgtgtttct 49502071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 343 - 398
Target Start/End: Original strand, 2425708 - 2425763
Alignment:
Q  343 tcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgagg 398  Q
    ||||| ||||||||||||| |||| ||| | |||||||||||||||||||||||||    
T  2425708 tcctcagcagttaactgcagccggatttccaaaacttcggcagttaactgccgagg 2425763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 379 - 422
Target Start/End: Complemental strand, 43011841 - 43011798
Alignment:
Q  379 tcggcagttaactgccgaggagcatttgagtaatttactcgtgt 422  Q
    |||||||||||||||||||| | |||||||||||||||||||||    
T  43011841 tcggcagttaactgccgaggggtatttgagtaatttactcgtgt 43011798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 379 - 422
Target Start/End: Complemental strand, 47652741 - 47652698
Alignment:
Q  379 tcggcagttaactgccgaggagcatttgagtaatttactcgtgt 422  Q
    ||||||||||||||||||||  ||||||||||||||||||||||    
T  47652741 tcggcagttaactgccgagggacatttgagtaatttactcgtgt 47652698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 332 - 422
Target Start/End: Original strand, 49661744 - 49661835
Alignment:
Q  332 agttttca-ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgt 422  Q
    |||||||| |||||||||||||||||||||| |||  |||   |||||||| || |||| | ||||||| ||||||| ||||||||||||||    
T  49661744 agttttcagttttcctcggcagttaactgcagccgtatttctaaaacttcgacaattaattaccgaggaacatttgaataatttactcgtgt 49661835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 389 - 444
Target Start/End: Complemental strand, 51461149 - 51461094
Alignment:
Q  389 actgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaatgtgt 444  Q
    |||||||| || |||||||||||||||||||| |||||||||||||| | ||||||    
T  51461149 actgccgaagaacatttgagtaatttactcgtctttctcaaccaaaccagatgtgt 51461094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 378 - 428
Target Start/End: Original strand, 13149069 - 13149119
Alignment:
Q  378 ttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctca 428  Q
    ||||||| |||||||| |||| | |||||||||||||||||||||||||||    
T  13149069 ttcggcaattaactgctgaggggtatttgagtaatttactcgtgtttctca 13149119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 351 - 453
Target Start/End: Original strand, 47505916 - 47506018
Alignment:
Q  351 agttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaatgtgtcaatag 450  Q
    ||||||||||| ||| ||||   ||||||||||| ||||||||||||  ||||||   ||| |||||| ||| ||||| |||||| ||||||||||| ||    
T  47505916 agttaactgcagccgattttctaaaacttcggcaattaactgccgagaggcatttagataaattactcttgtgtctcagccaaaccaaatgtgtcaacag 47506015  T
Q  451 caa 453  Q
    |||    
T  47506016 caa 47506018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 340 - 398
Target Start/End: Original strand, 51271611 - 51271669
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgagg 398  Q
    |||||||||||| ||||||||| |||| |||   |||||||||||||||||||||||||    
T  51271611 ttttcctcggcaattaactgcagccggatttctaaaacttcggcagttaactgccgagg 51271669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 340 - 396
Target Start/End: Original strand, 13636142 - 13636199
Alignment:
Q  340 ttttcctcggcagttaactgcaaccgg-ttttactaaacttcggcagttaactgccga 396  Q
    |||||||||||||||||||||| |||| |||| | ||| |||||||||||||||||||    
T  13636142 ttttcctcggcagttaactgcagccggatttttcaaaatttcggcagttaactgccga 13636199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 344 - 460
Target Start/End: Original strand, 36184309 - 36184426
Alignment:
Q  344 cctcggcagttaactgcaaccgg-ttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaatgt 442  Q
    |||||| |||||||||||  ||| |||||  |||||||| |||||||||| ||||  | ||||||||||||||||||| ||||||  |||||  || |||    
T  36184309 cctcggtagttaactgcagtcggattttagaaaacttcgacagttaactgtcgagaggtatttgagtaatttactcgtatttctcggccaaatcaattgt 36184408  T
Q  443 gtcaatagcaatactttt 460  Q
    ||||| | |||| |||||    
T  36184409 gtcaacaacaattctttt 36184426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 339 - 424
Target Start/End: Original strand, 41909724 - 41909809
Alignment:
Q  339 attttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgttt 424  Q
    |||||||||| |||||||||||| ||| || |   ||| |||| |||||||||| ||| |||||||||||||||||| | ||||||    
T  41909724 attttcctcgccagttaactgcagccgattctttaaaatttcgacagttaactgtcgatgagcatttgagtaatttatttgtgttt 41909809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 340 - 443
Target Start/End: Complemental strand, 585704 - 585604
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaa 439  Q
    |||||||||||||||||||||| ||||||| | |||  |||||||||||| |||||| | ||||||| |||| |||||| |||  |  | ||||||||||    
T  585704 ttttcctcggcagttaactgcagccggtttca-taa--ttcggcagttaattgccgaagggcatttgggtaaattactcctgtggcatagccaaactaaa 585608  T
Q  440 tgtg 443  Q
    ||||    
T  585607 tgtg 585604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 353 - 427
Target Start/End: Original strand, 12628163 - 12628236
Alignment:
Q  353 ttaactgcaaccggttttactaaacttcggcagttaa-ctgccgaggagcatttgagtaatttactcgtgtttctc 427  Q
    |||||||||||||||| |   ||| || ||||||||| ||||||||||  ||||||||||||||||||||||||||    
T  12628163 ttaactgcaaccggttctttaaaattttggcagttaaactgccgagga--atttgagtaatttactcgtgtttctc 12628236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 340 - 447
Target Start/End: Complemental strand, 18609144 - 18609040
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaa 439  Q
    |||||||||||||||||||||| ||||||| | |||  ||||||||||||||| | ||| ||||||   ||| ||||| |||||||||| |||||   ||    
T  18609144 ttttcctcggcagttaactgcagccggtttca-taa--ttcggcagttaactgtcaaggggcattttgataaattactagtgtttctcagccaaaggtaa 18609048  T
Q  440 tgtgtcaa 447  Q
    ||||||||    
T  18609047 tgtgtcaa 18609040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 349 - 397
Target Start/End: Complemental strand, 44596905 - 44596857
Alignment:
Q  349 gcagttaactgcaaccggttttactaaacttcggcagttaactgccgag 397  Q
    |||||||||||||||||| |||   ||||||||||||||||||||||||    
T  44596905 gcagttaactgcaaccggatttctaaaacttcggcagttaactgccgag 44596857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 380 - 428
Target Start/End: Complemental strand, 50683242 - 50683194
Alignment:
Q  380 cggcagttaactgccgaggagcatttgagtaatttactcgtgtttctca 428  Q
    |||||||||||| ||||| ||||||||||||| |||||| |||||||||    
T  50683242 cggcagttaactaccgagaagcatttgagtaaattactcatgtttctca 50683194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 340 - 422
Target Start/End: Complemental strand, 22524179 - 22524097
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaa-cttcggcagttaactgccgaggagcatttgagtaatttactcgtgt 422  Q
    |||||||||| ||||||||||  ||||||| |||||| |||||||| ||||||| ||||| ||||||  |||| ||||||||||    
T  22524179 ttttcctcgggagttaactgccgccggttt-actaaaacttcggcacttaactgtcgaggggcatttaggtaaattactcgtgt 22524097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 340 - 433
Target Start/End: Original strand, 28456741 - 28456831
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaa 433  Q
    |||||||||  ||||||||||| ||||||   ||| | ||||||||||||||||||||| | ||||| |||  |||||||||||| ||| ||||    
T  28456741 ttttcctcgatagttaactgcagccggtt---ctataattcggcagttaactgccgaggggtatttgggtagattactcgtgtttgtcagccaa 28456831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 379 - 454
Target Start/End: Original strand, 35255356 - 35255431
Alignment:
Q  379 tcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaatgtgtcaatagcaat 454  Q
    |||||||||||||||||||| |||||   |||| |||||||||||||||| ||||   | ||||||||| ||||||    
T  35255356 tcggcagttaactgccgaggggcattacggtaaattactcgtgtttctcagccaatgcatatgtgtcaagagcaat 35255431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 378 - 433
Target Start/End: Complemental strand, 45780248 - 45780193
Alignment:
Q  378 ttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaa 433  Q
    |||| ||||||||||||||||  ||||||||||| |||||| ||||||||| ||||    
T  45780248 ttcgacagttaactgccgagggacatttgagtaaattactcatgtttctcagccaa 45780193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 402 - 457
Target Start/End: Complemental strand, 48455486 - 48455431
Alignment:
Q  402 atttgagtaatttactcgtgtttctcaaccaaactaaatgtgtcaatagcaatact 457  Q
    ||||| |||| ||||||||||||||||||||||  |||||||| || |||||||||    
T  48455486 atttgggtaaattactcgtgtttctcaaccaaatcaaatgtgtgaacagcaatact 48455431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 343 - 422
Target Start/End: Complemental strand, 22397870 - 22397790
Alignment:
Q  343 tcctcggcagttaactgcaaccggttttact--aaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgt 422  Q
    ||||||||||||||||||  ||||||| |||  ||||||||||||||||||||||| | | ||||  ||| |||||||||||    
T  22397870 tcctcggcagttaactgccgccggttt-actcaaaacttcggcagttaactgccgaagggtattttggtattttactcgtgt 22397790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 340 - 370
Target Start/End: Complemental strand, 26633580 - 26633550
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggtttt 370  Q
    |||||||||||||||||||||||||||||||    
T  26633580 ttttcctcggcagttaactgcaaccggtttt 26633550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 381 - 435
Target Start/End: Original strand, 29356733 - 29356787
Alignment:
Q  381 ggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaac 435  Q
    |||||||||||||||||| | |||||  ||||||||| |||||||||| ||||||    
T  29356733 ggcagttaactgccgaggggtatttggataatttacttgtgtttctcagccaaac 29356787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 340 - 398
Target Start/End: Original strand, 46886407 - 46886465
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgagg 398  Q
    |||||||||||| |||||| || |||| |||   |||||||||||||||||||||||||    
T  46886407 ttttcctcggcacttaactacagccggatttctaaaacttcggcagttaactgccgagg 46886465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 378 - 428
Target Start/End: Original strand, 46909633 - 46909683
Alignment:
Q  378 ttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctca 428  Q
    |||||||||||||| || | || ||||| ||||||||||||||||||||||    
T  46909633 ttcggcagttaactaccaaagaacatttaagtaatttactcgtgtttctca 46909683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 374 - 443
Target Start/End: Complemental strand, 13629422 - 13629353
Alignment:
Q  374 aaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaatgtg 443  Q
    ||||||||||||||||||||||| | ||||||  ||| |||||||||||  | |||||| |||| |||||    
T  13629422 aaacttcggcagttaactgccgaagggcattttggtattttactcgtgtggcacaaccatactatatgtg 13629353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 396
Target Start/End: Complemental strand, 19159676 - 19159619
Alignment:
Q  340 ttttcctcggcagttaactgcaaccgg-ttttactaaacttcggcagttaactgccga 396  Q
    ||||||| |||||||||||||| |||| |||| | ||| |||||||||||||||||||    
T  19159676 ttttccttggcagttaactgcagccggatttttcaaaatttcggcagttaactgccga 19159619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 374 - 447
Target Start/End: Complemental strand, 21141044 - 21140971
Alignment:
Q  374 aaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaatgtgtcaa 447  Q
    |||||||||||||||| || ||| |  |||||  |||| |||||||||| ||||| |||||| |||||||||||    
T  21141044 aaacttcggcagttaattgtcgaaggacatttaggtaaattactcgtgtgtctcagccaaaccaaatgtgtcaa 21140971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 377 - 418
Target Start/End: Complemental strand, 38632507 - 38632466
Alignment:
Q  377 cttcggcagttaactgccgaggagcatttgagtaatttactc 418  Q
    ||||||||||||||| |||| | |||||||||||||||||||    
T  38632507 cttcggcagttaactaccgaagggcatttgagtaatttactc 38632466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 340 - 396
Target Start/End: Complemental strand, 94462 - 94406
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccga 396  Q
    |||||||||| ||||||||||| | || |||   |||||||||||||||||||||||    
T  94462 ttttcctcggtagttaactgcagctggatttctaaaacttcggcagttaactgccga 94406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 340 - 447
Target Start/End: Complemental strand, 1167615 - 1167507
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccga-ggagcatttgagtaatttactcgtgtttctcaaccaaactaa 438  Q
    |||||||||  |||||||||||  ||||||||||   | ||||||||||||||| || || | ||||  ||| |||||| |||||||||| |||||| |     
T  1167615 ttttcctcgatagttaactgcagtcggttttacttttcctcggcagttaactgcagagggggtattttggtattttacttgtgtttctcagccaaaccac 1167516  T
Q  439 atgtgtcaa 447  Q
    |||||||||    
T  1167515 atgtgtcaa 1167507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 374 - 422
Target Start/End: Complemental strand, 2365253 - 2365205
Alignment:
Q  374 aaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgt 422  Q
    ||||||||||||||||||||||| | ||||||  || ||||||||||||    
T  2365253 aaacttcggcagttaactgccgaagggcatttaggtcatttactcgtgt 2365205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 374 - 422
Target Start/End: Complemental strand, 19924773 - 19924725
Alignment:
Q  374 aaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgt 422  Q
    ||||||||||||||||||||||| | ||||||  ||| |||||||||||    
T  19924773 aaacttcggcagttaactgccgaagggcattttggtattttactcgtgt 19924725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 379 - 459
Target Start/End: Complemental strand, 26606812 - 26606732
Alignment:
Q  379 tcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaatgtgtcaatagcaatacttt 459  Q
    ||||||||||| | |||||| | ||||  ||| ||||||||||||||||| |||| |   ||||||||||| |||||||||    
T  26606812 tcggcagttaattaccgaggggtattttggtattttactcgtgtttctcagccaagcatgatgtgtcaatatcaatacttt 26606732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 344 - 400
Target Start/End: Complemental strand, 36908627 - 36908571
Alignment:
Q  344 cctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggag 400  Q
    |||||||||||||||||| ||||||||   |  ||||| ||||||||||||||||||    
T  36908627 cctcggcagttaactgcagccggtttttgaattcttcgacagttaactgccgaggag 36908571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 340 - 444
Target Start/End: Original strand, 41459231 - 41459335
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaa 439  Q
    |||||||||| ||||||||||| | ||||||| |   | |||||||||||||| ||||| | ||||  ||| |||||  |||||||||| |||||| | |    
T  41459231 ttttcctcggtagttaactgcagctggttttatttttcctcggcagttaactgtcgaggggtattttggtattttacatgtgtttctcagccaaacaaca 41459330  T
Q  440 tgtgt 444  Q
    |||||    
T  41459331 tgtgt 41459335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 340 - 396
Target Start/End: Original strand, 46217338 - 46217394
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccga 396  Q
    |||||||||| ||||||||||| ||| ||||   ||||||||||| |||||||||||    
T  46217338 ttttcctcggtagttaactgcagccgattttttcaaacttcggcaattaactgccga 46217394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 69; Significance: 9e-31; HSPs: 65)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 342 - 458
Target Start/End: Complemental strand, 14002570 - 14002454
Alignment:
Q  342 ttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaatg 441  Q
    |||||||||||||||||||| |||||| |   ||| ||| |||||||||||||||||  |||||||||||||||||||||||||||| |||||| |||||    
T  14002570 ttcctcggcagttaactgcagccggttctttaaaatttcagcagttaactgccgagggacatttgagtaatttactcgtgtttctcagccaaaccaaatg 14002471  T
Q  442 tgtcaatagcaatactt 458  Q
    |||||| ||||||||||    
T  14002470 tgtcaacagcaatactt 14002454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 340 - 447
Target Start/End: Complemental strand, 33222669 - 33222562
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaa 439  Q
    |||||||||||||||||||||| |||||| |   ||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| |||    
T  33222669 ttttcctcggcagttaactgcagccggttctttaaaatttcggtagttaactgccgaggagcatttgagtaatttactcgtgtttctcagccaaaccaaa 33222570  T
Q  440 tgtgtcaa 447  Q
    ||| ||||    
T  33222569 tgtatcaa 33222562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 340 - 442
Target Start/End: Complemental strand, 40156452 - 40156350
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaa 439  Q
    ||||||||| |||||||||||| |||||||| | ||| ||||||| ||||||| ||||| ||||||||||||||||||||||||||||| |||||| |||    
T  40156452 ttttcctcgtcagttaactgcagccggtttttcaaaatttcggcaattaactgtcgaggggcatttgagtaatttactcgtgtttctcagccaaaccaaa 40156353  T
Q  440 tgt 442  Q
    |||    
T  40156352 tgt 40156350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 342 - 457
Target Start/End: Original strand, 37322133 - 37322247
Alignment:
Q  342 ttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaatg 441  Q
    |||||||||||||||||||| |||||| | | ||| ||||||||||||||||||||| |||||||||||||||| |||||||| ||| |||||  |||||    
T  37322133 ttcctcggcagttaactgcagccggttcttcaaaatttcggcagttaactgccgagg-gcatttgagtaatttattcgtgtttttcagccaaatcaaatg 37322231  T
Q  442 tgtcaatagcaatact 457  Q
     ||||| | |||||||    
T  37322232 cgtcaacaacaatact 37322247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 374 - 443
Target Start/End: Complemental strand, 3086055 - 3085986
Alignment:
Q  374 aaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaatgtg 443  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||  | |||||||||||||||||    
T  3086055 aaacttcggcagttaactgccgaggaacatttgagtaatttactcgtgtggcacaaccaaactaaatgtg 3085986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 340 - 454
Target Start/End: Complemental strand, 30802093 - 30801982
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaa 439  Q
    |||||||||||||||||||||| ||||||| | |||  ||||||||||||||||||||| ||||||| |||| ||||| |||||||||| |||||   ||    
T  30802093 ttttcctcggcagttaactgcagccggtttca-taa--ttcggcagttaactgccgaggggcatttgggtaaattactagtgtttctcagccaaaggtaa 30801997  T
Q  440 tgtgtcaatagcaat 454  Q
    |||||||| ||||||    
T  30801996 tgtgtcaacagcaat 30801982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 340 - 443
Target Start/End: Original strand, 30803038 - 30803141
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaa 439  Q
    |||||||||||||||||||||| |||  |||   |||||||||||||||||||||||||  ||||||||||||||||||||||  | || |||||| |||    
T  30803038 ttttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgccgagggacatttgagtaatttactcgtgtggcacagccaaaccaaa 30803137  T
Q  440 tgtg 443  Q
    ||||    
T  30803138 tgtg 30803141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 340 - 422
Target Start/End: Original strand, 36510876 - 36510958
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgt 422  Q
    |||||||||||||||||||||| |||  |||   ||||||||||||||||||||||||| | |||||||||||||||||||||    
T  36510876 ttttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgccgaggggtatttgagtaatttactcgtgt 36510958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 374 - 443
Target Start/End: Original strand, 29074057 - 29074126
Alignment:
Q  374 aaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaatgtg 443  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||  | ||||||||| |||||||    
T  29074057 aaacttcggcagttaactgccgaggggcatttgagtaatttactcgtgtggcacaaccaaaccaaatgtg 29074126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 340 - 457
Target Start/End: Original strand, 29407907 - 29408024
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaa 439  Q
    |||||||||  ||||||||||| |||||| |   ||| |||| ||||||||||||||||  |||||||||||||||||| | ||||||||| |||| |||    
T  29407907 ttttcctcgttagttaactgcagccggttctttaaaatttcgacagttaactgccgagggacatttgagtaatttactcatatttctcaactaaaccaaa 29408006  T
Q  440 tgtgtcaatagcaatact 457  Q
    |||||||| | |||||||    
T  29408007 tgtgtcaacaacaatact 29408024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 340 - 443
Target Start/End: Complemental strand, 10424892 - 10424789
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaa 439  Q
    |||||||||||||||||||| | |||  |||   |||||||||||||||||||| |||| |||||||||||||||||||||||  | || |||||| |||    
T  10424892 ttttcctcggcagttaactgtagccgtatttctaaaacttcggcagttaactgctgaggggcatttgagtaatttactcgtgtggcacagccaaaccaaa 10424793  T
Q  440 tgtg 443  Q
    ||||    
T  10424792 tgtg 10424789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 340 - 443
Target Start/End: Original strand, 28477087 - 28477190
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaa 439  Q
    |||||||||||||||||||||| |||  |||   ||||||||||||||||||| ||||| ||||| ||||||||| |||||||  | ||||||||||| |    
T  28477087 ttttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgtcgaggggcattagagtaatttgctcgtgtggcacaaccaaactata 28477186  T
Q  440 tgtg 443  Q
    ||||    
T  28477187 tgtg 28477190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 351 - 450
Target Start/End: Complemental strand, 36652948 - 36652849
Alignment:
Q  351 agttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaatgtgtcaatag 450  Q
    ||||||||||| ||||||||   |||||||| |||||||||||||| |  ||||| ||||| |||||||||| ||||| |||||| ||||||||||||||    
T  36652948 agttaactgcatccggttttctaaaacttcgacagttaactgccgatggacatttaagtaaattactcgtgtgtctcagccaaaccaaatgtgtcaatag 36652849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 378 - 447
Target Start/End: Complemental strand, 4286109 - 4286040
Alignment:
Q  378 ttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaatgtgtcaa 447  Q
    ||||||||||||||||||| | | ||||||||||||||||||||||||||| |||||| | |||||||||    
T  4286109 ttcggcagttaactgccgatgggtatttgagtaatttactcgtgtttctcagccaaacaacatgtgtcaa 4286040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 340 - 429
Target Start/End: Original strand, 10425839 - 10425928
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaa 429  Q
    |||||||||||||||||||||| |||  |||   |||||||| ||||||||| |||||||||||||| |||| ||||| |||||||||||    
T  10425839 ttttcctcggcagttaactgcagccgtatttctaaaacttcgacagttaactaccgaggagcatttgggtaaattactggtgtttctcaa 10425928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 340 - 457
Target Start/End: Original strand, 12252502 - 12252619
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaa 439  Q
    |||||||||| ||||||||||| |||||| |   ||| |||| |||||||||||||| |  ||||||||||||||| | ||||||||||||||||  |||    
T  12252502 ttttcctcggaagttaactgcagccggttctttaaaatttcgacagttaactgccgaaggacatttgagtaatttatttgtgtttctcaaccaaatcaaa 12252601  T
Q  440 tgtgtcaatagcaatact 457  Q
    ||| |||| | |||||||    
T  12252602 tgtatcaacaacaatact 12252619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 374 - 435
Target Start/End: Complemental strand, 29947786 - 29947725
Alignment:
Q  374 aaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaac 435  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||  | |||||||||    
T  29947786 aaacttcggcagttaactgccgaggggcatttgagtaatttactcgtgtagcacaaccaaac 29947725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 376 - 433
Target Start/End: Complemental strand, 39186046 - 39185989
Alignment:
Q  376 acttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaa 433  Q
    ||||||||||||||||||| |||||||||||| ||| |||||||||||||||||||||    
T  39186046 acttcggcagttaactgccaaggagcatttgaataaattactcgtgtttctcaaccaa 39185989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 378 - 447
Target Start/End: Complemental strand, 40220654 - 40220585
Alignment:
Q  378 ttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaatgtgtcaa 447  Q
    ||||||||||||||||||||||| ||||| |||||||||| |||||||||| |||||| | |||||||||    
T  40220654 ttcggcagttaactgccgaggagtatttgggtaatttactagtgtttctcagccaaacaacatgtgtcaa 40220585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 341 - 443
Target Start/End: Original strand, 43619163 - 43619266
Alignment:
Q  341 tttcctcggcagttaactgcaaccggttttactaaa--cttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaa 438  Q
    ||||||||||||||||||||  ||||||| ||||||  |||||||||||||||||||| | |||||||| ||||||||||||||  | || |||||| ||    
T  43619163 tttcctcggcagttaactgccgccggttt-actaaaaacttcggcagttaactgccgaagggcatttgattaatttactcgtgtggcacagccaaaccaa 43619261  T
Q  439 atgtg 443  Q
    |||||    
T  43619262 atgtg 43619266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 341 - 454
Target Start/End: Complemental strand, 43976904 - 43976791
Alignment:
Q  341 tttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaat 440  Q
    |||||||||||||||||| || ||||||||   ||| ||||||||||||||||||||||||||||  || | |||||||||| ||||   ||||  ||||    
T  43976904 tttcctcggcagttaactacagccggttttttaaaatttcggcagttaactgccgaggagcatttaggttaattactcgtgtatctcggtcaaatcaaat 43976805  T
Q  441 gtgtcaatagcaat 454  Q
    ||||||| ||||||    
T  43976804 gtgtcaacagcaat 43976791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 340 - 444
Target Start/End: Complemental strand, 29407025 - 29406921
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaa 439  Q
    ||||||||||||||||| |||| |||||| |   ||| ||||||||||||||||||| | | || || |||| |||||||||||||||| |||||| |||    
T  29407025 ttttcctcggcagttaattgcagccggttctttaaaatttcggcagttaactgccgaagggtatctgggtaaattactcgtgtttctcagccaaaccaaa 29406926  T
Q  440 tgtgt 444  Q
    |||||    
T  29406925 tgtgt 29406921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 340 - 423
Target Start/End: Complemental strand, 28138633 - 28138550
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtt 423  Q
    ||||||||||||||||| ||||||||||| |   ||| |||||||||||||| | |||| |||||||| |||||||||||||||    
T  28138633 ttttcctcggcagttaattgcaaccggttctttaaaatttcggcagttaactactgaggggcatttgaataatttactcgtgtt 28138550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 377 - 443
Target Start/End: Original strand, 39951207 - 39951273
Alignment:
Q  377 cttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaatgtg 443  Q
    |||| |||||||||||||||||||||||||||||||||||||||||  | || |||||| |||||||    
T  39951207 cttctgcagttaactgccgaggagcatttgagtaatttactcgtgtgacacagccaaaccaaatgtg 39951273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 340 - 454
Target Start/End: Original strand, 40221150 - 40221264
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaa 439  Q
    |||||||||| ||||||||||| ||||| |   || | |||||||||||||||||||||   |||| |||||||||||||||| ||||| |||||  | |    
T  40221150 ttttcctcggtagttaactgcagccggtgtctttagaattcggcagttaactgccgagggatatttaagtaatttactcgtgtatctcagccaaagaaca 40221249  T
Q  440 tgtgtcaatagcaat 454  Q
    |||||||| ||||||    
T  40221250 tgtgtcaacagcaat 40221264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 340 - 444
Target Start/End: Original strand, 2271757 - 2271862
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaact-aa 438  Q
    ||||||||| |||||||||||| | | || |   ||| ||||||||||||| ||||||| | |||||||||||||||||||||| |||| ||||||| ||    
T  2271757 ttttcctcgacagttaactgcagctgattctttaaaatttcggcagttaacggccgaggggtatttgagtaatttactcgtgttcctcagccaaactcaa 2271856  T
Q  439 atgtgt 444  Q
    ||||||    
T  2271857 atgtgt 2271862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 340 - 447
Target Start/End: Original strand, 28420237 - 28420341
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaa 439  Q
    |||||||||||||||||||||| ||||||| | |||  ||||||||||||||| | ||| ||||||| |||| ||||| |||||||||| |||||   ||    
T  28420237 ttttcctcggcagttaactgcagccggtttca-taa--ttcggcagttaactgtcaaggggcatttgggtaaattactagtgtttctcagccaaaggtaa 28420333  T
Q  440 tgtgtcaa 447  Q
    ||||||||    
T  28420334 tgtgtcaa 28420341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 340 - 447
Target Start/End: Original strand, 4286721 - 4286828
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaa 439  Q
    ||||| |||| ||||||||||| | |||||   || | ||||||||||||||| ||||| | |||||||||||||||| |||||||||| |||||  | |    
T  4286721 ttttcatcggaagttaactgcagctggtttctttagaattcggcagttaactgtcgaggggtatttgagtaatttactagtgtttctcagccaaagaaca 4286820  T
Q  440 tgtgtcaa 447  Q
    ||||||||    
T  4286821 tgtgtcaa 4286828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 340 - 433
Target Start/End: Complemental strand, 12252172 - 12252082
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaa 433  Q
    |||||||||| ||||||||||| ||||||   | | | ||||||||||||||||||||||||||||  |||| ||||| |||||||||| ||||    
T  12252172 ttttcctcggtagttaactgcagccggtt---ccataattcggcagttaactgccgaggagcatttaggtaaattactagtgtttctcagccaa 12252082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 315 - 370
Target Start/End: Complemental strand, 19694316 - 19694261
Alignment:
Q  315 tgatgatgataattttgagttttcattttcctcggcagttaactgcaaccggtttt 370  Q
    |||||||||||||| || ||||||||||||||||| ||||||||||| ||||||||    
T  19694316 tgatgatgataattctgggttttcattttcctcggtagttaactgcagccggtttt 19694261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 340 - 447
Target Start/End: Original strand, 26544009 - 26544116
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaa 439  Q
    |||||||| | ||||||||||| |||||||    | | ||||||||||||||||||||  | |||||  |||||||||||||||||||| |||||| | |    
T  26544009 ttttcctcagtagttaactgcagccggtttcttcagaattcggcagttaactgccgagaggtatttggataatttactcgtgtttctcagccaaacaaca 26544108  T
Q  440 tgtgtcaa 447  Q
    ||||||||    
T  26544109 tgtgtcaa 26544116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 340 - 402
Target Start/End: Original strand, 3943212 - 3943274
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagca 402  Q
    |||| ||||||||||||||||| |||| |||   |||||||||||||||||||||||||||||    
T  3943212 tttttctcggcagttaactgcagccggatttctaaaacttcggcagttaactgccgaggagca 3943274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 340 - 398
Target Start/End: Original strand, 7189971 - 7190029
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgagg 398  Q
    |||||||||||||||||||||| |||| |||   |||||||||||||||||||||||||    
T  7189971 ttttcctcggcagttaactgcagccggatttctaaaacttcggcagttaactgccgagg 7190029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 340 - 443
Target Start/End: Complemental strand, 21998267 - 21998163
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttt--tactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaacta 437  Q
    |||||||||||||||||||||  |||||||  ||  ||||||||||||  |||| |||| | |||||||||||||||||||||||  | |||||||||||    
T  21998267 ttttcctcggcagttaactgccgccggtttccta-aaaacttcggcagcaaactaccgaagggcatttgagtaatttactcgtgtggcacaaccaaacta 21998169  T
Q  438 aatgtg 443  Q
     |||||    
T  21998168 tatgtg 21998163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 340 - 443
Target Start/End: Original strand, 22003421 - 22003525
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttt--tactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaacta 437  Q
    |||||||||||||||||||||  |||||||  ||  |||||||||||||| ||| |||| | |||||||||||||||||||||||  | || |||||| |    
T  22003421 ttttcctcggcagttaactgccgccggtttccta-aaaacttcggcagtttactaccgaagggcatttgagtaatttactcgtgtggcacagccaaacca 22003519  T
Q  438 aatgtg 443  Q
    ||||||    
T  22003520 aatgtg 22003525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 345 - 427
Target Start/End: Original strand, 29401630 - 29401712
Alignment:
Q  345 ctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctc 427  Q
    ||||| ||||||||||  ||||||||   |||||||| |||||||||||||||| |||||| ||||| |||||||||| ||||    
T  29401630 ctcgggagttaactgccgccggttttctaaaacttcgacagttaactgccgaggggcatttaagtaaattactcgtgtgtctc 29401712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 340 - 422
Target Start/End: Complemental strand, 39489236 - 39489154
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgt 422  Q
    ||||||||| ||||||||||||  ||  |||   ||||||||||||||||||||||| | | |||||||||||||||||||||    
T  39489236 ttttcctcgacagttaactgcagtcgtatttgtaaaacttcggcagttaactgccgaagggtatttgagtaatttactcgtgt 39489154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 158 - 234
Target Start/End: Complemental strand, 3920168 - 3920092
Alignment:
Q  158 ttcaatgatttgtgaattatgcagcgatatccataatgaatcaaaatcgaatttaattcaatccattgatgatgatg 234  Q
    ||||||||||||||||||||| ||| | ||  |||| ||||  ||||| |||| |||||||||||||||||||||||    
T  3920168 ttcaatgatttgtgaattatgtagcaagatttataaagaattgaaatcaaattcaattcaatccattgatgatgatg 3920092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 340 - 396
Target Start/End: Complemental strand, 23346833 - 23346777
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccga 396  Q
    ||||||| |||||||||||||| |||| ||||  |||||||||||||||||||||||    
T  23346833 ttttccttggcagttaactgcagccggatttataaaacttcggcagttaactgccga 23346777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 340 - 447
Target Start/End: Original strand, 29948785 - 29948889
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaa 439  Q
    ||||||||||||  |||||||||| ||||| | |||  ||||||||||||||| ||||| ||||||| |||| ||||| |||||||||| |||||   ||    
T  29948785 ttttcctcggcaaataactgcaacaggtttca-taa--ttcggcagttaactgtcgaggggcatttgggtaaattactagtgtttctcagccaaagataa 29948881  T
Q  440 tgtgtcaa 447  Q
    ||||||||    
T  29948882 tgtgtcaa 29948889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 374 - 454
Target Start/End: Complemental strand, 33416148 - 33416068
Alignment:
Q  374 aaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaatgtgtcaatagcaat 454  Q
    ||||||||| ||||||||||||| | | |||||||||| |||||||||||| ||| |||||| ||| |||| || ||||||    
T  33416148 aaacttcggtagttaactgccgaagggtatttgagtaaattactcgtgtttttcagccaaaccaaacgtgtaaacagcaat 33416068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 378 - 454
Target Start/End: Original strand, 43313417 - 43313493
Alignment:
Q  378 ttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaatgtgtcaatagcaat 454  Q
    |||||||| |||||| ||||  | ||||||||||||||||||||||||||| |||||| | ||||| ||| ||||||    
T  43313417 ttcggcagctaactgtcgagaggtatttgagtaatttactcgtgtttctcagccaaacaacatgtgccaacagcaat 43313493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 340 - 454
Target Start/End: Original strand, 3086086 - 3086197
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaa 439  Q
    |||||||| ||||||||||| | ||||||| | |||  |||||||||||||| |||| | ||||||| |||| ||||| |||||||||| |||||   ||    
T  3086086 ttttcctcagcagttaactgtagccggtttca-taa--ttcggcagttaactaccgaagggcatttgggtaaattactagtgtttctcagccaaaggtaa 3086182  T
Q  440 tgtgtcaatagcaat 454  Q
    |||||||| ||||||    
T  3086183 tgtgtcaacagcaat 3086197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 342 - 445
Target Start/End: Complemental strand, 6232716 - 6232613
Alignment:
Q  342 ttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaatg 441  Q
    |||||||||||||||||||| |||||| |   ||| ||| ||||||||||| |||| | |||||||||||||||| | | ||||||  |||||| ||||     
T  6232716 ttcctcggcagttaactgcagccggttctttaaaatttcagcagttaactgtcgagaaacatttgagtaatttacccatatttctctgccaaaccaaata 6232617  T
Q  442 tgtc 445  Q
    ||||    
T  6232616 tgtc 6232613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 340 - 433
Target Start/End: Complemental strand, 33002037 - 33001947
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaa 433  Q
    |||||||||| ||||||||||| ||||||   | | | |||| |||||||||||| ||| ||||||| |||| |||||||||||||||| ||||    
T  33002037 ttttcctcggtagttaactgcagccggtt---ccataattcgacagttaactgccaaggtgcatttgggtaaattactcgtgtttctcagccaa 33001947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 340 - 434
Target Start/End: Original strand, 39033541 - 39033632
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaa 434  Q
    |||| ||||||||||||||||| ||||||| | |||  ||||| ||||||||||||||| ||||||  |||| ||| | ||||||||||||||||    
T  39033541 tttttctcggcagttaactgcagccggtttca-taa--ttcggtagttaactgccgaggggcatttaggtaaattattagtgtttctcaaccaaa 39033632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 340 - 422
Target Start/End: Original strand, 39489986 - 39490065
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgt 422  Q
    |||||||||||||||||||||| ||||||| | |||  ||| |||||||||||||||||  ||||||| |||||||| |||||    
T  39489986 ttttcctcggcagttaactgcagccggtttca-taa--ttcagcagttaactgccgagggacatttgaataatttacccgtgt 39490065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 341 - 454
Target Start/End: Original strand, 3803564 - 3803678
Alignment:
Q  341 tttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccga-ggagcatttgagtaatttactcgtgtttctcaaccaaactaaa 439  Q
    ||||||||||||||||||||| |||| |||   |  | |||||||||||||||||| ||   ||||| |||||||||| |||||||||| |||||| | |    
T  3803564 tttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccgatgggatatttgggtaatttacttgtgtttctcagccaaacaaca 3803663  T
Q  440 tgtgtcaatagcaat 454  Q
    ||||  |||||||||    
T  3803664 tgtgggaatagcaat 3803678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 340 - 457
Target Start/End: Original strand, 28139576 - 28139694
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaactt-cggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaa 438  Q
    ||||||||||||||||| |||| ||| ||||  |||| || ||| ||||||||| ||| | | |||||| ||| |||||||||||||||| |||||  ||    
T  28139576 ttttcctcggcagttaaatgcagccgatttttttaaaatttcggtagttaactgtcgaagggtatttgaataaattactcgtgtttctcagccaaatcaa 28139675  T
Q  439 atgtgtcaatagcaatact 457  Q
    |||||| || | |||||||    
T  28139676 atgtgtgaacaacaatact 28139694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 340 - 428
Target Start/End: Complemental strand, 2983453 - 2983364
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgagg-agcatttgagtaatttactcgtgtttctca 428  Q
    |||||||||| ||||||||||| ||| ||  |   || |||||||| |||||||||||| ||||||||||||||||||  ||||||||||    
T  2983453 ttttcctcggtagttaactgcagccgattccaaacaaattcggcagctaactgccgagggagcatttgagtaatttacatgtgtttctca 2983364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 340 - 396
Target Start/End: Complemental strand, 17424185 - 17424128
Alignment:
Q  340 ttttcctcggcagttaactgcaaccgg-ttttactaaacttcggcagttaactgccga 396  Q
    |||||||||||||||||||||| |||| |||| | ||| |||||||||||||||||||    
T  17424185 ttttcctcggcagttaactgcagccggattttccaaaatttcggcagttaactgccga 17424128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 374 - 443
Target Start/End: Complemental strand, 20937916 - 20937847
Alignment:
Q  374 aaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaatgtg 443  Q
    ||||||||||||||||||||||| | ||||||  |||||||||||||||  | || |||||| |||||||    
T  20937916 aaacttcggcagttaactgccgaagggcatttaggtaatttactcgtgtggcacagccaaaccaaatgtg 20937847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 341 - 398
Target Start/End: Original strand, 24607589 - 24607646
Alignment:
Q  341 tttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgagg 398  Q
    ||||||||||||||||||||| ||||||||   || ||||||||||||||||| ||||    
T  24607589 tttcctcggcagttaactgcagccggttttttaaatcttcggcagttaactgctgagg 24607646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 377 - 422
Target Start/End: Complemental strand, 39033114 - 39033069
Alignment:
Q  377 cttcggcagttaactgccgaggagcatttgagtaatttactcgtgt 422  Q
    ||||| ||||||| ||||||||| ||||||||||||||||||||||    
T  39033114 cttcgacagttaattgccgaggaacatttgagtaatttactcgtgt 39033069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 340 - 396
Target Start/End: Original strand, 23347348 - 23347404
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccga 396  Q
    |||||||||| ||||||||||| |||| |||   |||||||||||||||||||||||    
T  23347348 ttttcctcggtagttaactgcagccggatttctaaaacttcggcagttaactgccga 23347404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 340 - 396
Target Start/End: Original strand, 43258753 - 43258809
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccga 396  Q
    ||||| |||| ||||||||||| ||||||||   |||||||||||||||||||||||    
T  43258753 ttttcttcggtagttaactgcagccggttttttcaaacttcggcagttaactgccga 43258809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 344 - 447
Target Start/End: Complemental strand, 6637583 - 6637480
Alignment:
Q  344 cctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaatgtg 443  Q
    |||||| ||||||||||| |||||||    |||||||||||||||||| ||||||  | |||  |||| |||||||||| |||||  | ||| |||||||    
T  6637583 cctcggtagttaactgcagccggtttccacaaacttcggcagttaactaccgagggacgtttaggtaaattactcgtgtgtctcagtctaaccaaatgtg 6637484  T
Q  444 tcaa 447  Q
    ||||    
T  6637483 tcaa 6637480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 396
Target Start/End: Complemental strand, 43257802 - 43257747
Alignment:
Q  341 tttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccga 396  Q
    ||||||||||||||||||||  ||||||||   |||||||| ||||||||||||||    
T  43257802 tttcctcggcagttaactgctgccggttttttcaaacttcgacagttaactgccga 43257747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 383 - 457
Target Start/End: Original strand, 16544679 - 16544753
Alignment:
Q  383 cagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaatgtgtcaatagcaatact 457  Q
    ||||||| || |||||  ||||||||||||||||| |||||| |||| ||||| |||| |||||| | |||||||    
T  16544679 cagttaattgtcgagggacatttgagtaatttacttgtgtttttcaatcaaaccaaatatgtcaacaacaatact 16544753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 340 - 405
Target Start/End: Original strand, 41273268 - 41273333
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaa-cttcggcagttaactgccgaggagcattt 405  Q
    |||||||||||||||||||||  ||| ||| |||||| |||||||||||||||||||| | ||||||    
T  41273268 ttttcctcggcagttaactgccgccgattt-actaaaacttcggcagttaactgccgaagggcattt 41273333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 382 - 447
Target Start/End: Complemental strand, 37294352 - 37294287
Alignment:
Q  382 gcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaatgtgtcaa 447  Q
    ||||||||||||||| |   ||||| |||| |||||||||||| ||| |||||||||| |||||||    
T  37294352 gcagttaactgccgaaggatatttgggtaaattactcgtgtttatcagccaaactaaacgtgtcaa 37294287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 374 - 422
Target Start/End: Original strand, 3940784 - 3940832
Alignment:
Q  374 aaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgt 422  Q
    ||||||||||||||||||||||| | ||||||  ||| |||||||||||    
T  3940784 aaacttcggcagttaactgccgaagggcattttggtattttactcgtgt 3940832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 374 - 422
Target Start/End: Original strand, 30497004 - 30497052
Alignment:
Q  374 aaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgt 422  Q
    ||||||||||||||||||||||| | ||||||  ||| |||||||||||    
T  30497004 aaacttcggcagttaactgccgaagggcattttggtattttactcgtgt 30497052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 340 - 396
Target Start/End: Original strand, 43870141 - 43870197
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccga 396  Q
    ||||||||||||| ||||||||  ||| |||   |||||||||||||||||||||||    
T  43870141 ttttcctcggcagctaactgcagtcggatttctaaaacttcggcagttaactgccga 43870197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 374 - 422
Target Start/End: Complemental strand, 43978554 - 43978506
Alignment:
Q  374 aaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgt 422  Q
    ||||||||||||||||||||||| | ||||||  ||| |||||||||||    
T  43978554 aaacttcggcagttaactgccgaagggcattttggtattttactcgtgt 43978506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 62; Significance: 1e-26; HSPs: 58)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 340 - 457
Target Start/End: Original strand, 14102368 - 14102485
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaa 439  Q
    ||||||||||||||||| |||| ||| || |   ||| ||||||||||||||| ||||| ||||||||||||||||||| ||||||||| |||||| |||    
T  14102368 ttttcctcggcagttaattgcagccgattctttaaaatttcggcagttaactgtcgaggggcatttgagtaatttactcatgtttctcagccaaaccaaa 14102467  T
Q  440 tgtgtcaatagcaatact 457  Q
    |||||||| |||||||||    
T  14102468 tgtgtcaacagcaatact 14102485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 340 - 457
Target Start/End: Original strand, 14412385 - 14412502
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaa 439  Q
    ||||||||||||||||| |||| ||| || |   ||| ||||||||||||||| ||||| ||||||||||||||||||| ||||||||| |||||| |||    
T  14412385 ttttcctcggcagttaattgcagccgattctttaaaatttcggcagttaactgtcgaggggcatttgagtaatttactcatgtttctcagccaaaccaaa 14412484  T
Q  440 tgtgtcaatagcaatact 457  Q
    |||||||| |||||||||    
T  14412485 tgtgtcaacagcaatact 14412502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 346 - 457
Target Start/End: Complemental strand, 38555137 - 38555026
Alignment:
Q  346 tcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaatgtgtc 445  Q
    |||||||||||||||| |||||| |   ||| || ||||||||||| ||||| ||||||| |||||||||||||| ||||||||||||||||||||||||    
T  38555137 tcggcagttaactgcagccggttctttaaaattttggcagttaactaccgagaagcatttaagtaatttactcgtatttctcaaccaaactaaatgtgtc 38555038  T
Q  446 aatagcaatact 457  Q
    || | |||||||    
T  38555037 aacaacaatact 38555026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 340 - 457
Target Start/End: Original strand, 30846815 - 30846932
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaa 439  Q
    |||||||||||||||||||||| |||||| |   ||| ||||||||||||||| ||||| | ||||||||||||||||||||||||| | |||||| |||    
T  30846815 ttttcctcggcagttaactgcagccggttctttaaaatttcggcagttaactgtcgaggggtatttgagtaatttactcgtgtttcttagccaaaccaaa 30846914  T
Q  440 tgtgtcaatagcaatact 457  Q
    ||| |||| | |||||||    
T  30846915 tgtttcaacatcaatact 30846932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 379 - 447
Target Start/End: Original strand, 34139728 - 34139796
Alignment:
Q  379 tcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaatgtgtcaa 447  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||    
T  34139728 tcggcagttaactgccgaggggcatttgagtaatttactcgtgtttctcagccaaactcaatgtgtcaa 34139796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 340 - 443
Target Start/End: Original strand, 10524377 - 10524480
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaa 439  Q
    ||||||||||||||||||||| | |||||||   |||||||| |||||||||||||||| |||||||||||||||||||||||  | || |||||| |||    
T  10524377 ttttcctcggcagttaactgccatcggttttctaaaacttcgacagttaactgccgaggggcatttgagtaatttactcgtgtgacacagccaaaccaaa 10524476  T
Q  440 tgtg 443  Q
    ||||    
T  10524477 tgtg 10524480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 342 - 457
Target Start/End: Complemental strand, 14101499 - 14101384
Alignment:
Q  342 ttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaatg 441  Q
    |||||||||||||| ||||| |||||| |   ||| ||||||||||||||||| ||| ||||||||||||||||||||||||||||| |||||  |||||    
T  14101499 ttcctcggcagttagctgcagccggttctttaaaatttcggcagttaactgccaaggggcatttgagtaatttactcgtgtttctcagccaaatcaaatg 14101400  T
Q  442 tgtcaatagcaatact 457  Q
    ||| || | |||||||    
T  14101399 tgtgaacatcaatact 14101384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 342 - 457
Target Start/End: Complemental strand, 14411516 - 14411401
Alignment:
Q  342 ttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaatg 441  Q
    |||||||||||||| ||||| |||||| |   ||| ||||||||||||||||| ||| ||||||||||||||||||||||||||||| |||||  |||||    
T  14411516 ttcctcggcagttagctgcagccggttctttaaaatttcggcagttaactgccaaggggcatttgagtaatttactcgtgtttctcagccaaatcaaatg 14411417  T
Q  442 tgtcaatagcaatact 457  Q
    ||| || | |||||||    
T  14411416 tgtgaacatcaatact 14411401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 374 - 443
Target Start/End: Original strand, 13921318 - 13921387
Alignment:
Q  374 aaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaatgtg 443  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  | ||||||||| |||||||    
T  13921318 aaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtggcacaaccaaaccaaatgtg 13921387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 343 - 447
Target Start/End: Original strand, 19804512 - 19804616
Alignment:
Q  343 tcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaatgt 442  Q
    ||||||||||||||||||| |||||||    |||||||||||||||||| |||||| ||||||  |||| |||||||||| ||||| |||||| ||||||    
T  19804512 tcctcggcagttaactgcagccggtttccacaaacttcggcagttaactaccgaggggcatttaggtaaattactcgtgtgtctcagccaaacaaaatgt 19804611  T
Q  443 gtcaa 447  Q
    |||||    
T  19804612 gtcaa 19804616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 340 - 422
Target Start/End: Complemental strand, 42794246 - 42794167
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgt 422  Q
    |||||||||||||||||||||| ||||||| | |||  ||||||||||| |||||||||||||||||||||||||||||||||    
T  42794246 ttttcctcggcagttaactgcagccggtttca-taa--ttcggcagttatctgccgaggagcatttgagtaatttactcgtgt 42794167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 340 - 422
Target Start/End: Complemental strand, 7122 - 7040
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgt 422  Q
    |||||||||||||||||||||| |||  |||   ||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  7122 ttttcctcggcagttaactgcagccgtatttctaaaacttcggtagttaactgccgaggggcatttgagtaatttactcgtgt 7040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 340 - 422
Target Start/End: Original strand, 17840910 - 17840992
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgt 422  Q
    ||||||||||||||||||||||  ||| |||   ||||||||||||||||||||||| || ||||||||||||||||||||||    
T  17840910 ttttcctcggcagttaactgcagtcggatttctaaaacttcggcagttaactgccgatgaacatttgagtaatttactcgtgt 17840992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 340 - 454
Target Start/End: Complemental strand, 19072490 - 19072376
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaa 439  Q
    |||||||||||||||||||| | ||| || |   ||| || |||||||||||| ||||| ||||||||||||||||||||||||||||| || ||| |||    
T  19072490 ttttcctcggcagttaactgtagccgattctttaaaattttggcagttaactgtcgaggggcatttgagtaatttactcgtgtttctcagccgaaccaaa 19072391  T
Q  440 tgtgtcaatagcaat 454  Q
    ||||| || ||||||    
T  19072390 tgtgtgaacagcaat 19072376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 341 - 443
Target Start/End: Complemental strand, 27657090 - 27656988
Alignment:
Q  341 tttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaat 440  Q
    ||||||||||||||||||||| |||  |||   |||||| |||||||||||||||||| |||||||| ||||||||||||||  | ||||||||| ||||    
T  27657090 tttcctcggcagttaactgcagccgtatttctaaaactttggcagttaactgccgaggggcatttgaataatttactcgtgtggcacaaccaaaccaaat 27656991  T
Q  441 gtg 443  Q
    |||    
T  27656990 gtg 27656988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 340 - 420
Target Start/End: Original strand, 12210610 - 12210690
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgt 420  Q
    |||||||||||||||||||||  |||  |||   ||||||||||||||||||||||||| |||||||||||||||||||||    
T  12210610 ttttcctcggcagttaactgcggccgtatttctaaaacttcggcagttaactgccgaggggcatttgagtaatttactcgt 12210690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 340 - 443
Target Start/End: Complemental strand, 49140706 - 49140606
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaa 439  Q
    |||||||||||||||||||||| ||||||| | |||  ||||||||||||||||||||| | |||||||||||||||||||||  |  |||||||| |||    
T  49140706 ttttcctcggcagttaactgcagccggtttca-taa--ttcggcagttaactgccgaggggtatttgagtaatttactcgtgtagcataaccaaaccaaa 49140610  T
Q  440 tgtg 443  Q
    ||||    
T  49140609 tgtg 49140606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 340 - 435
Target Start/End: Complemental strand, 12027392 - 12027298
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaac 435  Q
    |||||||||| ||||||||||| || ||||| | ||| |||||||||||||  |||||||||||||||||||||||| ||||||| ||| ||||||    
T  12027392 ttttcctcgg-agttaactgcagccagtttttcaaaatttcggcagttaacaaccgaggagcatttgagtaatttacccgtgtttttcagccaaac 12027298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 340 - 422
Target Start/End: Complemental strand, 46907589 - 46907510
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgt 422  Q
    |||||||||||||||||||||| ||||||| | |||  ||||||||||||||||||| | |||||||||||||||||||||||    
T  46907589 ttttcctcggcagttaactgcagccggtttca-taa--ttcggcagttaactgccgaagggcatttgagtaatttactcgtgt 46907510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 340 - 422
Target Start/End: Original strand, 49141641 - 49141720
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgt 422  Q
    |||||||||||||||||||||| ||||||| | |||  ||| ||||||||||||||||| |||||||||||||||||||||||    
T  49141641 ttttcctcggcagttaactgcagccggtttca-taa--ttctgcagttaactgccgaggggcatttgagtaatttactcgtgt 49141720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 378 - 447
Target Start/End: Complemental strand, 7974954 - 7974885
Alignment:
Q  378 ttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaatgtgtcaa 447  Q
    ||||||||||||||||||||| | ||||| ||||||||||||||||||||| |||||| | |||||||||    
T  7974954 ttcggcagttaactgccgaggggtatttgggtaatttactcgtgtttctcagccaaacaacatgtgtcaa 7974885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 338 - 422
Target Start/End: Original strand, 45258022 - 45258106
Alignment:
Q  338 cattttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgt 422  Q
    |||||||||||||||||||||||| |||  |||   ||| ||  ||||||||||||||||| |||||||||||||||||||||||    
T  45258022 cattttcctcggcagttaactgcagccgtatttctaaaatttatgcagttaactgccgaggggcatttgagtaatttactcgtgt 45258106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 340 - 447
Target Start/End: Complemental strand, 11886012 - 11885905
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaa 439  Q
    ||||||||||||||||||||||  ||||| |   ||| ||||  | |||| ||||||||  ||||||| |||||||||||||||||||| |||||| |||    
T  11886012 ttttcctcggcagttaactgcagtcggttctttaaaatttcgataattaattgccgagggacatttgaataatttactcgtgtttctcagccaaacgaaa 11885913  T
Q  440 tgtgtcaa 447  Q
    ||||||||    
T  11885912 tgtgtcaa 11885905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 340 - 454
Target Start/End: Complemental strand, 28563711 - 28563600
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaa 439  Q
    |||||||||||||||||||| | ||||||| | |||  ||||||||||||||| |||||  |||||| ||||  |||| |||||||||| ||||| | ||    
T  28563711 ttttcctcggcagttaactgtagccggtttca-taa--ttcggcagttaactgtcgagggacatttgggtaaactactagtgtttctcagccaaagttaa 28563615  T
Q  440 tgtgtcaatagcaat 454  Q
    |||||||||||||||    
T  28563614 tgtgtcaatagcaat 28563600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 340 - 422
Target Start/End: Complemental strand, 42582165 - 42582086
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgt 422  Q
    |||||||||||||||||||| | ||||||| | |||  |||||||||||||||||||||  ||||||||||||||||||||||    
T  42582165 ttttcctcggcagttaactgtagccggtttca-taa--ttcggcagttaactgccgagggacatttgagtaatttactcgtgt 42582086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 340 - 422
Target Start/End: Original strand, 8067 - 8149
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgt 422  Q
    |||||||||||||||||||||| |||  |||   ||||||| | ||||||||||||||| |||||||||||||||||| ||||    
T  8067 ttttcctcggcagttaactgcagccgtatttctaaaacttctgtagttaactgccgaggggcatttgagtaatttacttgtgt 8149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 340 - 433
Target Start/End: Complemental strand, 29112426 - 29112336
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaa 433  Q
    |||||||||||||||||||||| ||||||| |   |||| ||||| |||||||||||||||||||||||||| ||||| |||||| ||| ||||    
T  29112426 ttttcctcggcagttaactgcagccggtttcat--aact-cggcaattaactgccgaggagcatttgagtaaattacttgtgtttttcagccaa 29112336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 340 - 442
Target Start/End: Original strand, 38555433 - 38555535
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaa 439  Q
    |||||||||||||||||||||| | |||| |   ||| ||||||||||||||||||| |   |||||||||| |||||||||||||||  |||||| |||    
T  38555433 ttttcctcggcagttaactgcagctggttctttaaaatttcggcagttaactgccgaaggatatttgagtaaattactcgtgtttctcggccaaaccaaa 38555532  T
Q  440 tgt 442  Q
    |||    
T  38555533 tgt 38555535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 374 - 447
Target Start/End: Complemental strand, 47521436 - 47521363
Alignment:
Q  374 aaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaatgtgtcaa 447  Q
    ||||||||||||||||||||||||  ||||||  |||| |||||||||||||||| | |||| |||||||||||    
T  47521436 aaacttcggcagttaactgccgagaggcatttaggtaaattactcgtgtttctcagctaaaccaaatgtgtcaa 47521363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 340 - 428
Target Start/End: Original strand, 13645362 - 13645450
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctca 428  Q
    |||||||||||||||||||||| || ||| |   ||| ||| |||||||||| |||||| ||||||| |||||||||||||| ||||||    
T  13645362 ttttcctcggcagttaactgcagcctgttctttaaaatttcagcagttaactcccgaggggcatttgtgtaatttactcgtggttctca 13645450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 332 - 443
Target Start/End: Original strand, 18109786 - 18109898
Alignment:
Q  332 agttttcattttcctcggcagttaactgcaaccggttttactaaa-cttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaac 430  Q
    ||||||| |||||||||||||||||||||  ||||||  || ||| ||||| ||||| |||||||| | |||||||| ||||||||||||||  | || |    
T  18109786 agttttcgttttcctcggcagttaactgccgccggttgcacaaaaacttcgacagtttactgccgaagggcatttgaataatttactcgtgtagcacagc 18109885  T
Q  431 caaactaaatgtg 443  Q
    ||||| |||||||    
T  18109886 caaaccaaatgtg 18109898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 340 - 457
Target Start/End: Complemental strand, 13644474 - 13644357
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccg-aggagcatttgagtaatttactcgtgtttctcaaccaaactaa 438  Q
    |||||||||||| ||||||||| |||||| |   ||| |||||||||||||||||| ||||  ||||| |||| |||||||||||||||| |||||  ||    
T  13644474 ttttcctcggcatttaactgcagccggttctttaaaatttcggcagttaactgccgtagga-tatttgggtaaattactcgtgtttctcagccaaatcaa 13644376  T
Q  439 atgtgtcaatagcaatact 457  Q
    |||||| || | |||||||    
T  13644375 atgtgtgaacaacaatact 13644357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 384 - 454
Target Start/End: Complemental strand, 31512342 - 31512272
Alignment:
Q  384 agttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaatgtgtcaatagcaat 454  Q
    |||||||||||||||||||||||  ||| ||||| ||||||||||||||||   |||||||||| ||||||    
T  31512342 agttaactgccgaggagcatttggataaattactagtgtttctcaaccaaaggtaatgtgtcaacagcaat 31512272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 340 - 422
Target Start/End: Original strand, 42583080 - 42583162
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgt 422  Q
    |||||||||||||||||||||| |||  |||   |||||||  |||||||||||||||  | |||||||||||||||||||||    
T  42583080 ttttcctcggcagttaactgcagccgtatttctaaaacttctacagttaactgccgagaggtatttgagtaatttactcgtgt 42583162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 374 - 443
Target Start/End: Complemental strand, 38083826 - 38083757
Alignment:
Q  374 aaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaatgtg 443  Q
    ||||||| ||||||||||||||||| ||||||||||||| |||||||||  | || |||||| |||||||    
T  38083826 aaacttcagcagttaactgccgaggggcatttgagtaatgtactcgtgtgacacagccaaaccaaatgtg 38083757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 343 - 447
Target Start/End: Original strand, 5541566 - 5541670
Alignment:
Q  343 tcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaatgt 442  Q
    ||||||| ||||||||||  ||||||||   |||||| | |||||||||||| | | ||||||  |||| |||||||||| ||||| |||||| ||||||    
T  5541566 tcctcgggagttaactgccgccggttttctaaaactttgacagttaactgccaaagggcatttaggtaaattactcgtgtgtctcagccaaaccaaatgt 5541665  T
Q  443 gtcaa 447  Q
    |||||    
T  5541666 gtcaa 5541670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 373 - 457
Target Start/End: Original strand, 47751237 - 47751321
Alignment:
Q  373 taaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaatgtgtcaatagcaatact 457  Q
    |||| |||||||||||| |||||| | | ||||||||||||||||||||||| ||| | |||| |||| |||||| | |||||||    
T  47751237 taaatttcggcagttaagtgccgaagggtatttgagtaatttactcgtgtttatcagctaaaccaaatatgtcaacaacaatact 47751321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 340 - 422
Target Start/End: Complemental strand, 17834540 - 17834458
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaa-cttcggcagttaactgccgaggagcatttgagtaatttactcgtgt 422  Q
    |||||||||||||||||||||  ||||||| |||||| |||||||||||||||||||| | ||||||   ||| ||||||||||    
T  17834540 ttttcctcggcagttaactgccgccggttt-actaaaacttcggcagttaactgccgaagggcattttcataaattactcgtgt 17834458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 342 - 457
Target Start/End: Complemental strand, 30846002 - 30845887
Alignment:
Q  342 ttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaatg 441  Q
    |||||||||||||||||||| |||||| |   ||| || ||||||||||| | || ||  ||||| |||| ||| ||||||||||||| ||||| |||||    
T  30846002 ttcctcggcagttaactgcagccggttcttaaaaattttggcagttaacttctgaagaatatttgggtaaattattcgtgtttctcaatcaaaccaaatg 30845903  T
Q  442 tgtcaatagcaatact 457  Q
    ||| || | |||||||    
T  30845902 tgtgaacaacaatact 30845887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 332 - 422
Target Start/End: Original strand, 46908484 - 46908575
Alignment:
Q  332 agttttca-ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgt 422  Q
    |||||||| |||||||||||||||||||||| |||  |||   |||||||| |||||||||||||||  | |||| | ||||||||||||||    
T  46908484 agttttcagttttcctcggcagttaactgcagccgtatttctaaaacttcgacagttaactgccgagaggtatttaaataatttactcgtgt 46908575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 340 - 397
Target Start/End: Complemental strand, 46738855 - 46738798
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgag 397  Q
    |||| ||||||||||||||||| |||| |||   ||||||||||||||||||||||||    
T  46738855 tttttctcggcagttaactgcagccggatttctaaaacttcggcagttaactgccgag 46738798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 340 - 444
Target Start/End: Original strand, 11886904 - 11887008
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaa 439  Q
    |||||||| ||||||||||||| |||||| |   | | |||||||||||| ||| || |   ||||| |||| |||||||||||||| | ||||||||||    
T  11886904 ttttcctcagcagttaactgcagccggttctttaagatttcggcagttaattgctgaaggatatttgggtaaattactcgtgtttcttagccaaactaaa 11887003  T
Q  440 tgtgt 444  Q
    |||||    
T  11887004 tgtgt 11887008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 378 - 454
Target Start/End: Original strand, 38084805 - 38084881
Alignment:
Q  378 ttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaatgtgtcaatagcaat 454  Q
    ||||||||||||||||||||| ||||||| |||| ||||| |||||| ||| ||||    |||||||||| ||||||    
T  38084805 ttcggcagttaactgccgaggggcatttgggtaaattactagtgtttttcagccaatggtaatgtgtcaacagcaat 38084881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 340 - 443
Target Start/End: Original strand, 40928947 - 40929051
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaa-cttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaa 438  Q
    |||||||||||||||||||||  ||||||  || ||| ||||||||||| ||||||||   |||||||||||| ||| ||||||  | ||||||||  ||    
T  40928947 ttttcctcggcagttaactgctgccggttgcacaaaaacttcggcagtttactgccgaaaggcatttgagtaaattattcgtgtggcacaaccaaatcaa 40929046  T
Q  439 atgtg 443  Q
    |||||    
T  40929047 atgtg 40929051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 339 - 447
Target Start/End: Original strand, 48590358 - 48590466
Alignment:
Q  339 attttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaa 438  Q
    ||||||||||| ||||||||||| ||| ||||  || | |||| ||||||||||   ||| | ||||| ||||||||||  ||||||||| |||||| |     
T  48590358 attttcctcggtagttaactgcagccgatttttttagaattcgacagttaactgtataggggtatttgggtaatttactaatgtttctcagccaaacaac 48590457  T
Q  439 atgtgtcaa 447  Q
    |||||||||    
T  48590458 atgtgtcaa 48590466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 340 - 433
Target Start/End: Complemental strand, 29097250 - 29097160
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaa 433  Q
    |||||||||| ||||||||||| ||||||   | | |  ||||||||||||||  ||||||||||||||||| || ||||||||| ||| ||||    
T  29097250 ttttcctcggtagttaactgcagccggtt---ccataactcggcagttaactgttgaggagcatttgagtaaatttctcgtgtttttcagccaa 29097160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 340 - 447
Target Start/End: Original strand, 31324826 - 31324932
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaa 439  Q
    |||||||||| |||||||| ||  ||||||   || | |||||||||||| |||||||| | ||||| || ||||||||||||||||||  ||||| | |    
T  31324826 ttttcctcggtagttaactacagtcggtttctttagaattcggcagttaattgccgagg-gtatttgggttatttactcgtgtttctcagtcaaaccaca 31324924  T
Q  440 tgtgtcaa 447  Q
    ||||||||    
T  31324925 tgtgtcaa 31324932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 379 - 422
Target Start/End: Original strand, 42795139 - 42795182
Alignment:
Q  379 tcggcagttaactgccgaggagcatttgagtaatttactcgtgt 422  Q
    ||||||||||||||||||||   |||||||||||||||||||||    
T  42795139 tcggcagttaactgccgagggatatttgagtaatttactcgtgt 42795182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 340 - 443
Target Start/End: Original strand, 7975629 - 7975733
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttact--aaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaacta 437  Q
    |||||||||||||||||||||  |||| ||||||  |||||||||||||| |||||||| |  |||||  ||||  |||||||||  | ||||||||| |    
T  7975629 ttttcctcggcagttaactgccgccgg-tttactaaaaacttcggcagtttactgccgaaggacattttcgtaaagtactcgtgtggcacaaccaaacca 7975727  T
Q  438 aatgtg 443  Q
    ||||||    
T  7975728 aatgtg 7975733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 378 - 416
Target Start/End: Original strand, 38266159 - 38266197
Alignment:
Q  378 ttcggcagttaactgccgaggagcatttgagtaatttac 416  Q
    |||||||||||||||||||||  ||||||||||||||||    
T  38266159 ttcggcagttaactgccgagggacatttgagtaatttac 38266197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 396
Target Start/End: Original strand, 9367744 - 9367801
Alignment:
Q  340 ttttcctcggcagttaactgcaaccgg-ttttactaaacttcggcagttaactgccga 396  Q
    |||||||||||||||||||||| |||| ||| |  ||| |||||||||||||||||||    
T  9367744 ttttcctcggcagttaactgcagccggatttgagcaaatttcggcagttaactgccga 9367801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 422
Target Start/End: Original strand, 10098137 - 10098220
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttt--tactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgt 422  Q
    |||||||||||||||||||||| |||||||  ||  |||||||||||||| ||| |||| | ||||||  |||| ||||||||||    
T  10098137 ttttcctcggcagttaactgcagccggtttccta-aaaacttcggcagtttactaccgaagggcatttccgtaacttactcgtgt 10098220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 447
Target Start/End: Original strand, 27658031 - 27658100
Alignment:
Q  378 ttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaatgtgtcaa 447  Q
    ||||||||||||||||| |||  |||||| |||| ||||| |||||||||| |||||   ||||||||||    
T  27658031 ttcggcagttaactgccaagggacatttgggtaaattactagtgtttctcagccaaaggtaatgtgtcaa 27658100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 315 - 360
Target Start/End: Complemental strand, 27919137 - 27919092
Alignment:
Q  315 tgatgatgataattttgagttttcattttcctcggcagttaactgc 360  Q
    |||||||||||||| || ||||||||||||||| | ||||||||||    
T  27919137 tgatgatgataattctgggttttcattttcctctgtagttaactgc 27919092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 369
Target Start/End: Original strand, 36186493 - 36186522
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttt 369  Q
    ||||||||||||||||||||||||||||||    
T  36186493 ttttcctcggcagttaactgcaaccggttt 36186522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 340 - 396
Target Start/End: Complemental strand, 17838703 - 17838647
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccga 396  Q
    |||||||||| |||| |||||| |||| |||   |||||||||||||||||||||||    
T  17838703 ttttcctcggtagtttactgcagccggatttctaaaacttcggcagttaactgccga 17838647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 378 - 430
Target Start/End: Complemental strand, 38265463 - 38265411
Alignment:
Q  378 ttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaac 430  Q
    |||||||||||| |||||| | |||||||||||||||||  |||||| |||||    
T  38265463 ttcggcagttaattgccgatgggcatttgagtaatttacatgtgtttttcaac 38265411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 340 - 435
Target Start/End: Complemental strand, 40140792 - 40140696
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgagg-agcatttgagtaatttactcgtgtttctcaaccaaac 435  Q
    |||||||||||||||||||| | ||| ||||| |   | ||||||||||||||| |||| || |||| | || |||||| |||||||||| ||||||    
T  40140792 ttttcctcggcagttaactggagccgattttatttttcctcggcagttaactgcagaggaagtattttaatattttactggtgtttctcagccaaac 40140696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 59; Significance: 8e-25; HSPs: 83)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 340 - 422
Target Start/End: Original strand, 50998700 - 50998782
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgt 422  Q
    ||||| |||||||||||||||| |||| ||||  ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  50998700 ttttcttcggcagttaactgcagccggatttataaaacttcggcagttaactgccgaggggcatttgagtaatttactcgtgt 50998782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 340 - 444
Target Start/End: Original strand, 14043918 - 14044022
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaa 439  Q
    |||||||||||||||||||||| ||| ||||   |||||||| |||||||||||||| | | ||||| |||| |||||||||||||||| ||||||||||    
T  14043918 ttttcctcggcagttaactgcagccgattttctaaaacttcgacagttaactgccgaagggtatttgggtaaattactcgtgtttctcagccaaactaaa 14044017  T
Q  440 tgtgt 444  Q
    |||||    
T  14044018 tgtgt 14044022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 341 - 428
Target Start/End: Original strand, 24703436 - 24703523
Alignment:
Q  341 tttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctca 428  Q
    ||||||||||||||||||||| |||  |||   ||||||||| ||||||||||||||| |||||||||||||||||||||||||||||    
T  24703436 tttcctcggcagttaactgcatccgaatttctaaaacttcggtagttaactgccgaggggcatttgagtaatttactcgtgtttctca 24703523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 340 - 457
Target Start/End: Original strand, 11270304 - 11270421
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaa 439  Q
    ||||||| |||||||||||||| |||||| |  |||| ||||||||||||||| |||    ||||||| |||||||||||||||||||| ||||| ||||    
T  11270304 ttttccttggcagttaactgcagccggttcttttaaatttcggcagttaactgtcgaaagacatttgaataatttactcgtgtttctcagccaaattaaa 11270403  T
Q  440 tgtgtcaatagcaatact 457  Q
    ||||| || |||||||||    
T  11270404 tgtgtaaacagcaatact 11270421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 340 - 457
Target Start/End: Complemental strand, 32592270 - 32592153
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaa 439  Q
    ||||||||||||||||||||||  | ||| |   ||| |||| ||| ||||||||||||  |||||||||||||||||||||||||||| |||||| |||    
T  32592270 ttttcctcggcagttaactgcagtcagttctttaaaatttcgacagctaactgccgagggacatttgagtaatttactcgtgtttctcagccaaaccaaa 32592171  T
Q  440 tgtgtcaatagcaatact 457  Q
    |||||||| | |||||||    
T  32592170 tgtgtcaacaacaatact 32592153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 343 - 454
Target Start/End: Complemental strand, 16861179 - 16861068
Alignment:
Q  343 tcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaatgt 442  Q
    ||||||| ||||||||||| ||||||||   |||||||| |||||||||| ||||| ||||||  |||| |||||||||| ||||| |||||| ||||||    
T  16861179 tcctcggtagttaactgcatccggttttctaaaacttcgacagttaactgtcgaggggcatttaggtaaattactcgtgtgtctcagccaaaccaaatgt 16861080  T
Q  443 gtcaatagcaat 454  Q
    ||||| ||||||    
T  16861079 gtcaacagcaat 16861068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 340 - 454
Target Start/End: Complemental strand, 2062439 - 2062325
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaa 439  Q
    ||||||||| |||||||||||| || |||||   ||||||||||||||||||||||| | | |||||  ||| |||||||| ||||||| |||||| |||    
T  2062439 ttttcctcgacagttaactgcagccagttttctaaaacttcggcagttaactgccgaagggtatttggataaattactcgtatttctcagccaaaccaaa 2062340  T
Q  440 tgtgtcaatagcaat 454  Q
    ||||| |||||||||    
T  2062339 tgtgtaaatagcaat 2062325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 373 - 443
Target Start/End: Complemental strand, 4330812 - 4330742
Alignment:
Q  373 taaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaatgtg 443  Q
    |||| ||||||||||||||||||||||||||||||||||||||| |||||||| || |||||| |||||||    
T  4330812 taaaattcggcagttaactgccgaggagcatttgagtaatttacccgtgtttcccagccaaaccaaatgtg 4330742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 338 - 443
Target Start/End: Complemental strand, 4002795 - 4002690
Alignment:
Q  338 cattttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaacta 437  Q
    |||||||||||||||||||||||| |||| |||   ||||||||||| |||| |||||||| ||||||||| |||||||||||||  | || |||||| |    
T  4002795 cattttcctcggcagttaactgcagccggatttctaaaacttcggcaattaaatgccgaggggcatttgagcaatttactcgtgtggcacagccaaacca 4002696  T
Q  438 aatgtg 443  Q
    ||||||    
T  4002695 aatgtg 4002690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 341 - 433
Target Start/End: Complemental strand, 24700773 - 24700681
Alignment:
Q  341 tttcctcggcagttaactgcaaccggttttactaaa-cttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaa 433  Q
    ||||||||| |||||||||||||||| ||| ||||  | ||| |||||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  24700773 tttcctcgggagttaactgcaaccggattt-ctaattcctcgacagttaactgccgatgagcatttgagtaatttactcgtgtttctcagccaa 24700681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 340 - 457
Target Start/End: Complemental strand, 45075399 - 45075286
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaa 439  Q
    ||||||||||||||||||| || ||| || |   ||| |||||||||||||| ||||||||||||||| ||||||    ||||||||||||||||| |||    
T  45075399 ttttcctcggcagttaactccagccgattctttaaaatttcggcagttaactaccgaggagcatttgaataattt----gtgtttctcaaccaaaccaaa 45075304  T
Q  440 tgtgtcaatagcaatact 457  Q
    |||||||| ||| |||||    
T  45075303 tgtgtcaacagcgatact 45075286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 381 - 457
Target Start/End: Complemental strand, 51755682 - 51755606
Alignment:
Q  381 ggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaatgtgtcaatagcaatact 457  Q
    ||||||||||||| |||| ||||||||||||||||||||| ||||||| |||||| ||||||||||  |||||||||    
T  51755682 ggcagttaactgctgaggggcatttgagtaatttactcgtatttctcagccaaaccaaatgtgtcagcagcaatact 51755606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 340 - 443
Target Start/End: Complemental strand, 19988512 - 19988409
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaa 439  Q
    |||| ||||||||| ||||||| |||  |||   ||||||||||||||||||||||||| |||||||||||||||||||||||  | || |||||| |||    
T  19988512 tttttctcggcagtcaactgcagccgtatttctaaaacttcggcagttaactgccgaggggcatttgagtaatttactcgtgtggcacagccaaaccaaa 19988413  T
Q  440 tgtg 443  Q
    ||||    
T  19988412 tgtg 19988409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 342 - 457
Target Start/End: Complemental strand, 32743258 - 32743143
Alignment:
Q  342 ttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaatg 441  Q
    |||||||||||||||||||| | |||| |   ||| ||||||| ||||||||||| |  |||||||||||||||| ||||||||||| |||||| ||||     
T  32743258 ttcctcggcagttaactgcagctggttctttaaaatttcggcaattaactgccgatggacatttgagtaatttacccgtgtttctcagccaaaccaaata 32743159  T
Q  442 tgtcaatagcaatact 457  Q
    |||||| || ||||||    
T  32743158 tgtcaaaagtaatact 32743143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 340 - 443
Target Start/End: Original strand, 34543156 - 34543259
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaa 439  Q
    |||||||||||||||||||||| |||  |||   |||||||||||||||||||||||||  |||||||||||||||||| |||  | || |||||| |||    
T  34543156 ttttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgccgagggacatttgagtaatttactcatgtggcacagccaaaccaaa 34543255  T
Q  440 tgtg 443  Q
    ||||    
T  34543256 tgtg 34543259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 340 - 422
Target Start/End: Complemental strand, 12897877 - 12897795
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgt 422  Q
    |||||||||||||||||||||| |||  |||   |||||||||||||||||||| |||| | |||||||||||||||||||||    
T  12897877 ttttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgctgaggggtatttgagtaatttactcgtgt 12897795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 340 - 454
Target Start/End: Complemental strand, 19842557 - 19842443
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaa 439  Q
    |||||||| ||||||||||||| ||| || |   ||| ||||||||||||||||||| | |||||||| ||||||||| ||||||||||  ||||| |||    
T  19842557 ttttcctcagcagttaactgcagccgattctttaaaatttcggcagttaactgccgaagggcatttgaataatttacttgtgtttctcagacaaaccaaa 19842458  T
Q  440 tgtgtcaatagcaat 454  Q
    ||||| || ||||||    
T  19842457 tgtgtgaacagcaat 19842443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 340 - 422
Target Start/End: Original strand, 27739587 - 27739669
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgt 422  Q
    |||||||||||||||||||||| |||  |||   ||||||||||||||||||||||| | | |||||||||||||||||||||    
T  27739587 ttttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgccgaagggtatttgagtaatttactcgtgt 27739669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 340 - 422
Target Start/End: Original strand, 28817021 - 28817103
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgt 422  Q
    |||||||||||||||||||||| |||  |||   |||||| |||||||||||||||||| | |||||||||||||||||||||    
T  28817021 ttttcctcggcagttaactgcagccgtatttctaaaactttggcagttaactgccgaggggtatttgagtaatttactcgtgt 28817103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 342 - 444
Target Start/End: Complemental strand, 50330663 - 50330561
Alignment:
Q  342 ttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaatg 441  Q
    |||||||||||||||||||| ||| || |   ||| |||| || ||||||||||||  ||||||||||||||||||||||||| ||| |||||| |||||    
T  50330663 ttcctcggcagttaactgcagccgattctttaaaatttcgacaattaactgccgagaggcatttgagtaatttactcgtgtttatcagccaaaccaaatg 50330564  T
Q  442 tgt 444  Q
    |||    
T  50330563 tgt 50330561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 340 - 457
Target Start/End: Complemental strand, 7941163 - 7941046
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaa 439  Q
    |||||||| ||||||||||||| |||||| |   ||| ||||||||||||||||||| | | ||||  |||| |||||||||||||||| |||||| |||    
T  7941163 ttttcctcagcagttaactgcagccggttctttaaaatttcggcagttaactgccgaagggtatttaggtaaattactcgtgtttctcagccaaaccaaa 7941064  T
Q  440 tgtgtcaatagcaatact 457  Q
    ||||| || | |||||||    
T  7941063 tgtgtgaacaacaatact 7941046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 340 - 420
Target Start/End: Complemental strand, 11248607 - 11248530
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgt 420  Q
    |||||||||||||||||||||| ||||||| | |||  |||| ||||||||||||||||||||||||| ||||||||||||    
T  11248607 ttttcctcggcagttaactgcagccggtttca-taa--ttcgacagttaactgccgaggagcatttgaataatttactcgt 11248530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 340 - 444
Target Start/End: Complemental strand, 6143724 - 6143620
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaa 439  Q
    |||||||||||||||||||||| |||||| |  |||| ||| ||| ||||||||||| |  |||||||||||||||||||| ||||||  |||||| |||    
T  6143724 ttttcctcggcagttaactgcagccggttcttttaaatttcagcaattaactgccgaaggacatttgagtaatttactcgtttttctcggccaaaccaaa 6143625  T
Q  440 tgtgt 444  Q
     ||||    
T  6143624 cgtgt 6143620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 340 - 447
Target Start/End: Original strand, 1294097 - 1294204
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaa 439  Q
    |||||||||| |||||||||||  ||||||    | | ||||||||||||||||||||| | ||||| |||||||||||||||||||||  ||||| | |    
T  1294097 ttttcctcggaagttaactgcagtcggtttcttcagaattcggcagttaactgccgaggggtatttgggtaatttactcgtgtttctcagtcaaacaaca 1294196  T
Q  440 tgtgtcaa 447  Q
    ||||||||    
T  1294197 tgtgtcaa 1294204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 340 - 447
Target Start/End: Complemental strand, 10658876 - 10658769
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaa 439  Q
    |||||||||||||||| ||||| |||||| |  |||| ||||||||||||| ||||| |  ||||||  |||||||||| ||||||||| |||||| |||    
T  10658876 ttttcctcggcagttagctgcagccggttcttttaaatttcggcagttaacagccgaaggacatttgcataatttactcatgtttctcagccaaaccaaa 10658777  T
Q  440 tgtgtcaa 447  Q
    ||| ||||    
T  10658776 tgtatcaa 10658769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 340 - 422
Target Start/End: Original strand, 11095107 - 11095186
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgt 422  Q
    ||||||||||||||||||||||  |||||| | |||  |||||||| |||||||||||| |||||||||||||||||||||||    
T  11095107 ttttcctcggcagttaactgcagtcggtttca-taa--ttcggcagctaactgccgaggggcatttgagtaatttactcgtgt 11095186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 381 - 447
Target Start/End: Original strand, 26494557 - 26494623
Alignment:
Q  381 ggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaatgtgtcaa 447  Q
    |||||||||||| ||| || |||||||||||||||||||||||||||| |||||| |||||| ||||    
T  26494557 ggcagttaactgtcgatgaacatttgagtaatttactcgtgtttctcagccaaaccaaatgtatcaa 26494623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 374 - 443
Target Start/End: Complemental strand, 3493607 - 3493538
Alignment:
Q  374 aaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaatgtg 443  Q
    ||||||||||||||||||| |||||| ||||| ||||||||||||||||  | || ||||||||||||||    
T  3493607 aaacttcggcagttaactgtcgaggaacatttaagtaatttactcgtgtggcacagccaaactaaatgtg 3493538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 374 - 443
Target Start/End: Complemental strand, 3497301 - 3497232
Alignment:
Q  374 aaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaatgtg 443  Q
    ||||||||||||||||||| |||||| ||||| ||||||||||||||||  | || ||||||||||||||    
T  3497301 aaacttcggcagttaactgtcgaggaacatttaagtaatttactcgtgtggcacagccaaactaaatgtg 3497232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 340 - 447
Target Start/End: Original strand, 10492893 - 10492997
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaa 439  Q
    ||||||||||||||||| |||| ||||||| | |||  ||||||||||||||| ||||| ||||||| |||| ||||| |||||||||| |||||   ||    
T  10492893 ttttcctcggcagttaattgcagccggtttca-taa--ttcggcagttaactgtcgaggggcatttgggtaaattactagtgtttctcagccaaaggtaa 10492989  T
Q  440 tgtgtcaa 447  Q
    ||||||||    
T  10492990 tgtgtcaa 10492997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 340 - 443
Target Start/End: Complemental strand, 16851176 - 16851076
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaa 439  Q
    ||||||||||||||||||| || ||| ||| | |||  ||||||||||||||||||||| |||||||||||| ||||||||||  |  | ||||||||||    
T  16851176 ttttcctcggcagttaactacagccgatttca-taa--ttcggcagttaactgccgaggggcatttgagtaaattactcgtgtggcatagccaaactaaa 16851080  T
Q  440 tgtg 443  Q
    ||||    
T  16851079 tgtg 16851076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 381 - 457
Target Start/End: Original strand, 20485597 - 20485673
Alignment:
Q  381 ggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaatgtgtcaatagcaatact 457  Q
    |||||||||||||||| | | ||||| |||| |||||||||||||||| ||||||||||||||| || | |||||||    
T  20485597 ggcagttaactgccgaagggtatttgggtaaattactcgtgtttctcagccaaactaaatgtgtgaacatcaatact 20485673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 343 - 447
Target Start/End: Complemental strand, 49265838 - 49265734
Alignment:
Q  343 tcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaatgt 442  Q
    ||||||| |||||||| || ||||||||   ||||||||||| |||||||  |||| |||||| ||||| ||||| || | |||||||||||| ||||||    
T  49265838 tcctcggaagttaactacagccggttttctaaaacttcggcaattaactgatgaggggcatttaagtaaattacttgtatgtctcaaccaaaccaaatgt 49265739  T
Q  443 gtcaa 447  Q
    |||||    
T  49265738 gtcaa 49265734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 341 - 400
Target Start/End: Complemental strand, 596836 - 596777
Alignment:
Q  341 tttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggag 400  Q
    ||||||||||||||||||||| |||  ||||| |||||||||||||||| ||||||||||    
T  596836 tttcctcggcagttaactgcagccgaatttacaaaacttcggcagttaattgccgaggag 596777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 340 - 435
Target Start/End: Complemental strand, 13743346 - 13743251
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaac 435  Q
    |||||||||||||||||||||| |||| |||   |  | |||||||||||||||||||| | ||||| |||||||||  |||||||||| ||||||    
T  13743346 ttttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccgaggggtatttgggtaatttacatgtgtttctcagccaaac 13743251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 340 - 422
Target Start/End: Complemental strand, 26245385 - 26245306
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgt 422  Q
    |||| ||||| ||||||||||| ||||||| | |||  ||||||||||||||||||||| | |||||||||||||||||||||    
T  26245385 tttttctcggaagttaactgcagccggtttca-taa--ttcggcagttaactgccgaggggtatttgagtaatttactcgtgt 26245306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 340 - 422
Target Start/End: Complemental strand, 2267083 - 2267001
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgt 422  Q
    |||||||||| ||||||||||| |||| | |   |||||||| || ||||||| ||||| |||||||||||||||||||||||    
T  2267083 ttttcctcggtagttaactgcagccggatatctaaaacttcgacaattaactgtcgaggggcatttgagtaatttactcgtgt 2267001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 340 - 422
Target Start/End: Original strand, 11249544 - 11249626
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgt 422  Q
    |||||||||||||||||||||| ||   |||   ||||||| ||||||||||||||| | | |||||||||||||||||||||    
T  11249544 ttttcctcggcagttaactgcagccatatttctaaaacttcagcagttaactgccgaagggtatttgagtaatttactcgtgt 11249626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 340 - 398
Target Start/End: Complemental strand, 55385190 - 55385132
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgagg 398  Q
    |||||||||||||||||||||| |||| |||   |||||||||||||||||||||||||    
T  55385190 ttttcctcggcagttaactgcagccggatttctaaaacttcggcagttaactgccgagg 55385132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 339 - 418
Target Start/End: Original strand, 7942025 - 7942103
Alignment:
Q  339 attttcctcggcagttaactgcaaccggt-tttactaaacttcggcagttaactgccgaggagcatttgagtaatttactc 418  Q
    ||||| |||||||||||||| |||||  | ||||  ||| ||||||||||||||||||||||| |||||||||||||||||    
T  7942025 attttgctcggcagttaactacaaccattcttta--aaatttcggcagttaactgccgaggagtatttgagtaatttactc 7942103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 343 - 447
Target Start/End: Original strand, 55207686 - 55207791
Alignment:
Q  343 tcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccga-ggagcatttgagtaatttactcgtgtttctcaaccaaactaaatg 441  Q
    |||| |||||||||||||||||||||||   |  |||||||||||||||||||| || |||   ||||| ||||||||||||||||| ||| |  |||||    
T  55207686 tcctaggcagttaactgcaaccggtttttgaattcttcggcagttaactgccgatggggcaaaagagtattttactcgtgtttctcagccatatgaaatg 55207785  T
Q  442 tgtcaa 447  Q
    ||||||    
T  55207786 tgtcaa 55207791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 340 - 435
Target Start/End: Complemental strand, 2743451 - 2743355
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggag-catttgagtaatttactcgtgtttctcaaccaaac 435  Q
    |||||||||||||||||||||| |||| |||   |  | |||||||||||||||||||| |  ||||| |||||||||| |||||||||| ||||||    
T  2743451 ttttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccgaggggatatttgggtaatttacttgtgtttctcagccaaac 2743355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 343 - 447
Target Start/End: Complemental strand, 17561809 - 17561705
Alignment:
Q  343 tcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaatgt 442  Q
    ||||||| ||||||||||| ||||||||   ||| ||||||||||||||| | |||  |||||  |||| |||||||||| ||||| |||||  ||||||    
T  17561809 tcctcgggagttaactgcagccggttttctaaaatttcggcagttaactgtcaagggacatttaggtaaattactcgtgtgtctcagccaaatcaaatgt 17561710  T
Q  443 gtcaa 447  Q
    |||||    
T  17561709 gtcaa 17561705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 340 - 422
Target Start/End: Original strand, 12898710 - 12898789
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgt 422  Q
    |||||||||||| ||||||||| ||||||| | |||  ||||||||||||||| ||||| ||||||| |||| ||||||||||    
T  12898710 ttttcctcggcaattaactgcagccggtttca-taa--ttcggcagttaactgtcgaggggcatttgggtaaattactcgtgt 12898789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 340 - 422
Target Start/End: Complemental strand, 27738658 - 27738579
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgt 422  Q
    |||||||||||||||||||||| ||||||  | |||  ||||||||||||||||||| | ||||||| |||| ||||||||||    
T  27738658 ttttcctcggcagttaactgcagccggttgca-taa--ttcggcagttaactgccgaagggcatttgggtaaattactcgtgt 27738579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 378 - 433
Target Start/End: Complemental strand, 31977674 - 31977619
Alignment:
Q  378 ttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaa 433  Q
    |||| |||||||||||||| ||||||||| |||| |||||||||||||||| ||||    
T  31977674 ttcgacagttaactgccgatgagcatttgggtaaattactcgtgtttctcagccaa 31977619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 340 - 433
Target Start/End: Original strand, 32744172 - 32744262
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaa 433  Q
    |||||||||| ||||||||||| ||||||   | | | |||||||||||||| |||||| ||||||| |||| ||||| |||||||||| ||||    
T  32744172 ttttcctcggtagttaactgcagccggtt---ccataattcggcagttaactaccgaggggcatttgggtaaattactagtgtttctcagccaa 32744262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 340 - 398
Target Start/End: Complemental strand, 43476245 - 43476186
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttact-aaacttcggcagttaactgccgagg 398  Q
    |||||||||||||||||||||| |||| ||| || |||||||||||||||||| ||||||    
T  43476245 ttttcctcggcagttaactgcagccggattttctaaaacttcggcagttaacttccgagg 43476186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 378 - 433
Target Start/End: Complemental strand, 52514306 - 52514251
Alignment:
Q  378 ttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaa 433  Q
    |||||||||||| |||||||| | |||||||||| |||||||||||||||| ||||    
T  52514306 ttcggcagttaattgccgaggggtatttgagtaaattactcgtgtttctcagccaa 52514251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 384 - 447
Target Start/End: Original strand, 52515052 - 52515115
Alignment:
Q  384 agttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaatgtgtcaa 447  Q
    ||||||||||||||||||||||| |||| | |||||||||||||| ||||  || |||||||||    
T  52515052 agttaactgccgaggagcatttgggtaaatcactcgtgtttctcagccaatgtatatgtgtcaa 52515115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 378 - 428
Target Start/End: Complemental strand, 4274101 - 4274051
Alignment:
Q  378 ttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctca 428  Q
    ||||||||||||||||||||| |||||||| ||||||||  ||||||||||    
T  4274101 ttcggcagttaactgccgaggggcatttgaataatttacatgtgtttctca 4274051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 340 - 398
Target Start/End: Original strand, 43478850 - 43478908
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgagg 398  Q
    |||||||||||||||||||||| |||| |||   ||||||| |||||||||||||||||    
T  43478850 ttttcctcggcagttaactgcagccggatttctaaaacttcagcagttaactgccgagg 43478908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 340 - 422
Target Start/End: Complemental strand, 2645509 - 2645426
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttt--tactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgt 422  Q
    ||||||||||| |||||||||  |||||||  ||  |||||||||||||||||||||||||  |||||| |||||||||| ||||    
T  2645509 ttttcctcggctgttaactgccgccggtttccta-aaaacttcggcagttaactgccgagggacatttgtgtaatttacttgtgt 2645426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 340 - 396
Target Start/End: Original strand, 2647719 - 2647776
Alignment:
Q  340 ttttcctcggcagttaactgcaaccgg-ttttactaaacttcggcagttaactgccga 396  Q
    |||||||||||||||||||||| |||| |||| | ||| |||||||||||||||||||    
T  2647719 ttttcctcggcagttaactgcagccggatttttcaaaatttcggcagttaactgccga 2647776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 340 - 396
Target Start/End: Complemental strand, 8475879 - 8475823
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaa-cttcggcagttaactgccga 396  Q
    |||||||||||||||||||||  ||||||| |||||| ||||||||||||||||||||    
T  8475879 ttttcctcggcagttaactgccgccggttt-actaaaacttcggcagttaactgccga 8475823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 341 - 398
Target Start/End: Original strand, 16647168 - 16647225
Alignment:
Q  341 tttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgagg 398  Q
    ||||||||||||||||||||| |||| |||   |||| ||||||||||||||||||||    
T  16647168 tttcctcggcagttaactgcagccggatttctaaaacatcggcagttaactgccgagg 16647225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 340 - 428
Target Start/End: Complemental strand, 34712286 - 34712197
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccga-ggagcatttgagtaatttactcgtgtttctca 428  Q
    |||||||||| ||||||||||| ||||||| |   || || ||||| |||||||||| || |||||||||||||||||  ||||||||||    
T  34712286 ttttcctcggtagttaactgcatccggtttcaaacaaatttggcagctaactgccgagggggcatttgagtaatttacatgtgtttctca 34712197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 340 - 397
Target Start/End: Complemental strand, 41803051 - 41802994
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgag 397  Q
    |||||||||||||||||||||| ||||||||   |  |||||||||||||||||||||    
T  41803051 ttttcctcggcagttaactgcagccggtttttaaattcttcggcagttaactgccgag 41802994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 340 - 457
Target Start/End: Original strand, 45076270 - 45076387
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaa 439  Q
    |||| |||||||||||||| || |||||| |   ||| ||||||||||||||||||| |   ||||| |||| |||||||| ||||||| |||||| |||    
T  45076270 tttttctcggcagttaactacagccggttctttaaaatttcggcagttaactgccgaaggatatttgggtaaattactcgtatttctcagccaaaccaaa 45076369  T
Q  440 tgtgtcaatagcaatact 457  Q
     |||| || | |||||||    
T  45076370 agtgtgaacaacaatact 45076387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 340 - 428
Target Start/End: Original strand, 4274970 - 4275058
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctca 428  Q
    ||||||| ||||||||| |||  |||||| |   ||| ||| ||||||||| || ||||||||||||||||||||||  ||||||||||    
T  4274970 ttttccttggcagttaaatgccgccggttctttaaaatttcagcagttaacagcagaggagcatttgagtaatttacatgtgtttctca 4275058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 340 - 447
Target Start/End: Original strand, 34648224 - 34648331
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggtttt-actaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaa 438  Q
    ||||||||||  |||||||||| |||||||| |  ||||| || ||||||||||| |||| | |||||||||| ||||  |||||||||| ||||  |||    
T  34648224 ttttcctcggtcgttaactgcagccggttttgaagaaact-cgacagttaactgctgaggggtatttgagtaaattacatgtgtttctcagccaaggtaa 34648322  T
Q  439 atgtgtcaa 447  Q
    |||||||||    
T  34648323 atgtgtcaa 34648331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 340 - 422
Target Start/End: Original strand, 4015149 - 4015231
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaa-cttcggcagttaactgccgaggagcatttgagtaatttactcgtgt 422  Q
    ||||||||||||||||||| |  ||||||| |||||| |||||||||||||||||||| | ||||||  ||||  |||||||||    
T  4015149 ttttcctcggcagttaactcccgccggttt-actaaaacttcggcagttaactgccgaagggcattttcgtaaagtactcgtgt 4015231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 340 - 435
Target Start/End: Original strand, 13747738 - 13747833
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaac 435  Q
    |||||||| ||||||||||||| |||| |||   |  | |||||||||||||||||||||| |||||  ||||||||  |||||| ||| ||||||    
T  13747738 ttttcctcagcagttaactgcagccggatttcaaattcatcggcagttaactgccgaggagtatttggataatttacatgtgtttatcagccaaac 13747833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 340 - 454
Target Start/End: Original strand, 34712779 - 34712894
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccga-ggagcatttgagtaatttactcgtgtttctcaaccaaactaa 438  Q
    |||||||||| ||||||||||| ||||||  |   || ||| |||| |||||||||| || |||||||||||||||||  |||||||||| ||  |  ||    
T  34712779 ttttcctcgggagttaactgcagccggttccaaacaaattcagcagctaactgccgagggggcatttgagtaatttacatgtgtttctcagccctatgaa 34712878  T
Q  439 atgtgtcaatagcaat 454  Q
    ||||||||| ||||||    
T  34712879 atgtgtcaacagcaat 34712894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 340 - 398
Target Start/End: Original strand, 600564 - 600622
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgagg 398  Q
    ||||||||| |||||||||||  |||| ||| | ||||||||||||||||||| |||||    
T  600564 ttttcctcgacagttaactgcggccggatttccaaaacttcggcagttaactgtcgagg 600622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 340 - 418
Target Start/End: Complemental strand, 10492080 - 10492002
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactc 418  Q
    ||||||||| |||||||||||| |||  |||   |||||||| ||||||||| |||| |  ||||||||||||||||||    
T  10492080 ttttcctcgtcagttaactgcagccgtatttctaaaacttcgacagttaactaccgatggacatttgagtaatttactc 10492002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 340 - 398
Target Start/End: Complemental strand, 48246465 - 48246407
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgagg 398  Q
    ||||||||| |||||||||||| |||| |||   ||||||| |||||||||||||||||    
T  48246465 ttttcctcgacagttaactgcagccggatttctaaaacttcagcagttaactgccgagg 48246407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 396
Target Start/End: Original strand, 4331840 - 4331896
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaa-cttcggcagttaactgccga 396  Q
    |||||||| ||||||||||||  ||||||| |||||| ||||||||||||||||||||    
T  4331840 ttttcctcagcagttaactgccgccggttt-actaaaacttcggcagttaactgccga 4331896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 379 - 435
Target Start/End: Original strand, 9429908 - 9429965
Alignment:
Q  379 tcggcagttaactgccga-ggagcatttgagtaatttactcgtgtttctcaaccaaac 435  Q
    |||||||||||||||||| || | ||||| |||||||||| |||||||||| ||||||    
T  9429908 tcggcagttaactgccgagggggtatttgcgtaatttacttgtgtttctcagccaaac 9429965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 374 - 443
Target Start/End: Complemental strand, 16444626 - 16444557
Alignment:
Q  374 aaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaatgtg 443  Q
    ||||||||||||||||||||||| | ||||||  ||| |||||||||||  | |||||| |||| |||||    
T  16444626 aaacttcggcagttaactgccgaagggcattttggtattttactcgtgtggcacaaccatactatatgtg 16444557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 344 - 409
Target Start/End: Complemental strand, 19750091 - 19750026
Alignment:
Q  344 cctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagt 409  Q
    |||||||||||||||||| |||  |||   ||| ||||||||||||||||||||| | ||||||||    
T  19750091 cctcggcagttaactgcagccgtatttctaaaatttcggcagttaactgccgaggggtatttgagt 19750026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 382 - 419
Target Start/End: Original strand, 19750075 - 19750112
Alignment:
Q  382 gcagttaactgccgaggagcatttgagtaatttactcg 419  Q
    ||||||||||||||||| | ||||||||||||||||||    
T  19750075 gcagttaactgccgaggggtatttgagtaatttactcg 19750112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 396
Target Start/End: Complemental strand, 34049133 - 34049076
Alignment:
Q  340 ttttcctcggcagttaactgcaaccgg-ttttactaaacttcggcagttaactgccga 396  Q
    |||||||||||||||||||||| |||| ||| |  ||| |||||||||||||||||||    
T  34049133 ttttcctcggcagttaactgcagccggatttgagcaaatttcggcagttaactgccga 34049076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 396
Target Start/End: Original strand, 42166430 - 42166486
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaa-cttcggcagttaactgccga 396  Q
    ||||||||||||||| |||||  ||||||| |||||| ||||||||||||||||||||    
T  42166430 ttttcctcggcagtttactgccgccggttt-actaaaacttcggcagttaactgccga 42166486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 396
Target Start/End: Complemental strand, 54389848 - 54389791
Alignment:
Q  340 ttttcctcggcagttaactgcaaccgg-ttttactaaacttcggcagttaactgccga 396  Q
    |||||||||||||||||||||| |||| ||| |  ||| |||||||||||||||||||    
T  54389848 ttttcctcggcagttaactgcagccggatttgagaaaatttcggcagttaactgccga 54389791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 344 - 396
Target Start/End: Original strand, 2271337 - 2271389
Alignment:
Q  344 cctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccga 396  Q
    |||||||||||||||||| |||| |||   |||||||| ||||||||||||||    
T  2271337 cctcggcagttaactgcagccggatttctaaaacttcgacagttaactgccga 2271389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 340 - 396
Target Start/End: Original strand, 4004823 - 4004879
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccga 396  Q
    |||||||||||||||||||||| |||| |||   ||||||||||| |||||| ||||    
T  4004823 ttttcctcggcagttaactgcagccggatttctaaaacttcggcaattaactaccga 4004879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 346 - 418
Target Start/End: Complemental strand, 16611147 - 16611075
Alignment:
Q  346 tcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactc 418  Q
    |||||||||||||||  ||||||||   ||||||||| ||||||||||||| | ||||||  |||| ||||||    
T  16611147 tcggcagttaactgccgccggttttctaaaacttcggtagttaactgccgaagggcatttaggtaaattactc 16611075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 346 - 418
Target Start/End: Original strand, 22048106 - 22048178
Alignment:
Q  346 tcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactc 418  Q
    |||||||||||||||  ||||||||   ||||||||| ||||||||||||| | ||||||  |||| ||||||    
T  22048106 tcggcagttaactgccgccggttttctaaaacttcggtagttaactgccgaagggcatttaggtaaattactc 22048178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 374 - 422
Target Start/End: Complemental strand, 34045426 - 34045378
Alignment:
Q  374 aaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgt 422  Q
    ||||||||||||||||||||||| | ||||||  ||| |||||||||||    
T  34045426 aaacttcggcagttaactgccgaagggcattttggtattttactcgtgt 34045378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 340 - 447
Target Start/End: Complemental strand, 34542206 - 34542102
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaa 439  Q
    |||||||||||||||||||||| ||||||| | |||  ||| ||||||||||||||| || |||||  |||| |||||  | ||||||| |||||   ||    
T  34542206 ttttcctcggcagttaactgcagccggtttca-taa--ttcagcagttaactgccgaagaacatttaggtaaattactaatatttctcagccaaaggtaa 34542110  T
Q  440 tgtgtcaa 447  Q
    ||||||||    
T  34542109 tgtgtcaa 34542102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 379 - 447
Target Start/End: Complemental strand, 34645576 - 34645508
Alignment:
Q  379 tcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaatgtgtcaa 447  Q
    |||||||||||||||||| |   ||||  |||| |||||||||||||||| ||||  ||||||||||||    
T  34645576 tcggcagttaactgccgaaggatatttaggtaaattactcgtgtttctcagccaaggtaaatgtgtcaa 34645508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 374 - 422
Target Start/End: Complemental strand, 46388976 - 46388928
Alignment:
Q  374 aaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgt 422  Q
    ||||||||||||||||||||||| | ||||||  ||| |||||||||||    
T  46388976 aaacttcggcagttaactgccgaagggcattttggtattttactcgtgt 46388928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 340 - 457
Target Start/End: Complemental strand, 54618 - 54501
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaa 439  Q
    |||||||||||||||||||||| |||||| | | ||| || | ||||||| ||||||||  ||||||||||||||||| |||||||| | | ||||||||    
T  54618 ttttcctcggcagttaactgcagccggttcttcaaaattttgacagttaattgccgagggacatttgagtaatttacttgtgtttctaagctaaactaaa 54519  T
Q  440 tgtgtcaatagcaatact 457  Q
    |||||||| |||||||||    
T  54518 tgtgtcaacagcaatact 54501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 379 - 447
Target Start/End: Original strand, 653 - 721
Alignment:
Q  379 tcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaatgtgtcaa 447  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||    
T  653 tcggcagttaactgccgaggggcatttgagtaatttactcgtgtttctcagccaaactcaatgtgtcaa 721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 51; Significance: 5e-20; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 379 - 457
Target Start/End: Complemental strand, 35096685 - 35096607
Alignment:
Q  379 tcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaatgtgtcaatagcaatact 457  Q
    ||||||||||||| |||| | |||||||||||||||||||||||||||||||||||| |||||||| || | |||||||    
T  35096685 tcggcagttaactaccgaagggcatttgagtaatttactcgtgtttctcaaccaaaccaaatgtgtaaacaacaatact 35096607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 340 - 444
Target Start/End: Original strand, 15888820 - 15888923
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaa 439  Q
    |||||||||||||||||||||| ||||||||   ||||||||| ||||||||||||| | |  |||| |||| |||||||||||||||| |||||| |||    
T  15888820 ttttcctcggcagttaactgcagccggttttctaaaacttcggtagttaactgccgaag-gtgtttgggtaaattactcgtgtttctcagccaaaccaaa 15888918  T
Q  440 tgtgt 444  Q
    |||||    
T  15888919 tgtgt 15888923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 340 - 422
Target Start/End: Complemental strand, 2109570 - 2109488
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgt 422  Q
    |||||||||||||||||||||| |||  |||   ||||||||||||||||||||||||  | |||||||||||||||||||||    
T  2109570 ttttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgccgagaggtatttgagtaatttactcgtgt 2109488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 340 - 422
Target Start/End: Complemental strand, 25554758 - 25554676
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgt 422  Q
    ||||||| |||||||||||||| |||  |||   ||||||||||||||||||||||||| | |||||||||||||||||||||    
T  25554758 ttttcctaggcagttaactgcagccgtatttctaaaacttcggcagttaactgccgaggggtatttgagtaatttactcgtgt 25554676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 340 - 422
Target Start/End: Complemental strand, 26350027 - 26349946
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgt 422  Q
    |||||||||||||||||||||  ||||||| |||||||||||||||||||||||||| ||||||||  ||||  |||||||||    
T  26350027 ttttcctcggcagttaactgccgccggttt-actaaacttcggcagttaactgccgaagagcattttcgtaaaatactcgtgt 26349946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 340 - 443
Target Start/End: Original strand, 13164280 - 13164380
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaa 439  Q
    |||||||||| ||||||||||| ||||||| | |||  ||||| ||||||||||||||| |||||||||||||||||||||||  |  | ||||||||||    
T  13164280 ttttcctcgggagttaactgcagccggtttca-taa--ttcggtagttaactgccgaggggcatttgagtaatttactcgtgtggcatagccaaactaaa 13164376  T
Q  440 tgtg 443  Q
    ||||    
T  13164377 tgtg 13164380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 340 - 443
Target Start/End: Original strand, 6760892 - 6760995
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaa 439  Q
    |||||||||||| ||||||||| |||  |||   |||||||||||||||||| || ||| |||||||||||||||||||||||  | || |||||| |||    
T  6760892 ttttcctcggcaattaactgcagccgtatttctaaaacttcggcagttaactaccaaggggcatttgagtaatttactcgtgtggcacagccaaaccaaa 6760991  T
Q  440 tgtg 443  Q
    ||||    
T  6760992 tgtg 6760995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 340 - 447
Target Start/End: Original strand, 14124738 - 14124845
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaa 439  Q
    |||||||| ||| ||||||||| ||| ||  |  |||||||| ||||||| || ||||| ||||||||||||||||||||||||||| | |||||  |||    
T  14124738 ttttcctcagcaattaactgcagccgattccagaaaacttcgacagttaattgtcgaggggcatttgagtaatttactcgtgtttcttagccaaatcaaa 14124837  T
Q  440 tgtgtcaa 447  Q
    ||||||||    
T  14124838 tgtgtcaa 14124845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 340 - 444
Target Start/End: Complemental strand, 28249938 - 28249833
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaa--cttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaacta 437  Q
    |||||||||||||||||||||  ||||||   |||||  |||||||| ||||||| |||||||||||||||||||||||||||||  | || |||||| |    
T  28249938 ttttcctcggcagttaactgccgccggttcc-ctaaaaacttcggcatttaactgtcgaggagcatttgagtaatttactcgtgtggcacagccaaacca 28249840  T
Q  438 aatgtgt 444  Q
    |||||||    
T  28249839 aatgtgt 28249833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 378 - 454
Target Start/End: Original strand, 456099 - 456175
Alignment:
Q  378 ttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaatgtgtcaatagcaat 454  Q
    ||||||||||||||||||||| ||||||| |||| |||||||||||||||| ||||   | ||||||||| ||||||    
T  456099 ttcggcagttaactgccgaggggcatttgggtaaattactcgtgtttctcagccaatgcatatgtgtcaacagcaat 456175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 340 - 444
Target Start/End: Original strand, 9049104 - 9049208
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaa 439  Q
    |||||||||| ||||||||||| ||||||||   ||||||||||||||||||| ||| | ||||||  ||||  |||| |||||||||||||  | ||||    
T  9049104 ttttcctcggtagttaactgcagccggttttttcaaacttcggcagttaactgtcgaagggcattttcgtaaagtactagtgtttctcaaccttattaaa 9049203  T
Q  440 tgtgt 444  Q
    |||||    
T  9049204 tgtgt 9049208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 332 - 426
Target Start/End: Complemental strand, 117320 - 117228
Alignment:
Q  332 agttttca-ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttct 426  Q
    |||||||| |||||||||||||||||||||| ||||||   | | | ||||||||||||||||||||| ||||||| |||| |||||  |||||||    
T  117320 agttttcagttttcctcggcagttaactgcagccggtt---ccataattcggcagttaactgccgaggggcatttgggtaaattactattgtttct 117228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 340 - 405
Target Start/End: Complemental strand, 9048128 - 9048063
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcattt 405  Q
    |||||||||| ||||||||||| ||||||||   ||||||||||||||||||||||| | ||||||    
T  9048128 ttttcctcggtagttaactgcagccggttttttcaaacttcggcagttaactgccgaagggcattt 9048063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 374 - 443
Target Start/End: Complemental strand, 32691169 - 32691100
Alignment:
Q  374 aaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaatgtg 443  Q
    ||||||||||||||||||| ||||| ||||||| |||||||||| ||||  | ||||||||| |||||||    
T  32691169 aaacttcggcagttaactgtcgaggggcatttgcgtaatttacttgtgtggcacaaccaaaccaaatgtg 32691100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 339 - 457
Target Start/End: Complemental strand, 17596995 - 17596876
Alignment:
Q  339 attttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccga-ggagcatttgagtaatttactcgtgtttctcaaccaaacta 437  Q
    ||||||||||||||||||||||| ||||||||| |   | ||| ||||||||||| || || | ||||  ||| |||||| |||||||||| ||||||      
T  17596995 attttcctcggcagttaactgcagccggttttatttttcctcgacagttaactgcagagggggtattttggtattttactggtgtttctcagccaaacat 17596896  T
Q  438 aatgtgtcaatagcaatact 457  Q
     ||||||||| |||||||||    
T  17596895 gatgtgtcaacagcaatact 17596876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 340 - 396
Target Start/End: Complemental strand, 22305161 - 22305104
Alignment:
Q  340 ttttcctcggcagttaactgcaaccgg-ttttactaaacttcggcagttaactgccga 396  Q
    |||||||||||||||||||||| |||| |||| | ||| |||||||||||||||||||    
T  22305161 ttttcctcggcagttaactgcagccggatttttcaaaatttcggcagttaactgccga 22305104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 374 - 422
Target Start/End: Complemental strand, 8708000 - 8707952
Alignment:
Q  374 aaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgt 422  Q
    ||||||||||||||| ||| ||| | |||||||||||||||||||||||    
T  8708000 aaacttcggcagttagctgtcgatgggcatttgagtaatttactcgtgt 8707952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 379 - 422
Target Start/End: Complemental strand, 13158449 - 13158406
Alignment:
Q  379 tcggcagttaactgccgaggagcatttgagtaatttactcgtgt 422  Q
    |||||||||||||||||||| | |||||| ||||||||||||||    
T  13158449 tcggcagttaactgccgaggggtatttgaataatttactcgtgt 13158406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 379 - 422
Target Start/End: Complemental strand, 13163305 - 13163262
Alignment:
Q  379 tcggcagttaactgccgaggagcatttgagtaatttactcgtgt 422  Q
    |||||||||||||||||||| | |||||| ||||||||||||||    
T  13163305 tcggcagttaactgccgaggggtatttgaataatttactcgtgt 13163262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 378 - 433
Target Start/End: Complemental strand, 14834722 - 14834667
Alignment:
Q  378 ttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaa 433  Q
    ||||||||||||||||||| ||  ||||| |||| |||||||||||||||| ||||    
T  14834722 ttcggcagttaactgccgatgattatttgggtaaattactcgtgtttctcagccaa 14834667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 378 - 433
Target Start/End: Complemental strand, 15545745 - 15545690
Alignment:
Q  378 ttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaa 433  Q
    |||| ||||||||||||||||  ||||||| |||||||||||| |||||| |||||    
T  15545745 ttcgacagttaactgccgagggacatttgaataatttactcgtatttctcgaccaa 15545690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 340 - 443
Target Start/End: Complemental strand, 13382682 - 13382578
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttt--tactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaacta 437  Q
    |||||||||||||||||||||  |||||||  ||  |||||||| ||||| ||| |||| |  ||||||||||||||||||||||  | || |||||| |    
T  13382682 ttttcctcggcagttaactgccgccggtttccta-aaaacttcgtcagtttactaccgaaggacatttgagtaatttactcgtgtggcacagccaaacca 13382584  T
Q  438 aatgtg 443  Q
    ||||||    
T  13382583 aatgtg 13382578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 369
Target Start/End: Complemental strand, 2051081 - 2051052
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttt 369  Q
    ||||||||||||||||||||||||||||||    
T  2051081 ttttcctcggcagttaactgcaaccggttt 2051052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 396
Target Start/End: Complemental strand, 6204880 - 6204823
Alignment:
Q  340 ttttcctcggcagttaactgcaaccgg-ttttactaaacttcggcagttaactgccga 396  Q
    |||||||||||||||||||||| |||| ||| |  ||| |||||||||||||||||||    
T  6204880 ttttcctcggcagttaactgcagccggatttgagaaaatttcggcagttaactgccga 6204823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 396
Target Start/End: Complemental strand, 11691847 - 11691790
Alignment:
Q  340 ttttcctcggcagttaactgcaaccgg-ttttactaaacttcggcagttaactgccga 396  Q
    |||||||||||||||||||||| |||| ||| |  ||| |||||||||||||||||||    
T  11691847 ttttcctcggcagttaactgcagccggatttgagcaaatttcggcagttaactgccga 11691790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 393
Target Start/End: Original strand, 14012395 - 14012448
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgc 393  Q
    |||||||||||||||||||| | |||| |||   ||||||||||||||||||||    
T  14012395 ttttcctcggcagttaactgaagccggatttctaaaacttcggcagttaactgc 14012448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 422
Target Start/End: Original strand, 17597544 - 17597627
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttt--tactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgt 422  Q
    |||||||||||||||||||||  |||||||  ||  |||||||| |||  |||| |||| || ||||||||||||||||||||||    
T  17597544 ttttcctcggcagttaactgccgccggtttccta-aaaacttcgacagcaaactaccgaagaacatttgagtaatttactcgtgt 17597627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 369
Target Start/End: Complemental strand, 29286282 - 29286253
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttt 369  Q
    ||||||||||||||||||||||||||||||    
T  29286282 ttttcctcggcagttaactgcaaccggttt 29286253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 346 - 447
Target Start/End: Original strand, 32034392 - 32034493
Alignment:
Q  346 tcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaatgtgtc 445  Q
    |||||||||||||||| ||||||     ||| || | |||||||||||||| | | |||||| ||| ||||||||||||||   |||||| |||||||||    
T  32034392 tcggcagttaactgcagccggttccttcaaaatttgtcagttaactgccgaagggtatttgaataaattactcgtgtttcttggccaaaccaaatgtgtc 32034491  T
Q  446 aa 447  Q
    ||    
T  32034492 aa 32034493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 3178149 - 3178177
Alignment:
Q  419 gtgtttctcaaccaaactaaatgtgtcaa 447  Q
    |||||||||||||||||||||||||||||    
T  3178149 gtgtttctcaaccaaactaaatgtgtcaa 3178177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 340 - 396
Target Start/End: Original strand, 29076343 - 29076399
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccga 396  Q
    |||||||| ||||||||||||| |||| |||   |||||||| ||||||||||||||    
T  29076343 ttttcctcagcagttaactgcagccggatttctaaaacttcgacagttaactgccga 29076399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 340 - 396
Target Start/End: Original strand, 29109876 - 29109932
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccga 396  Q
    |||||||| ||||||||||||| |||| |||   |||||||| ||||||||||||||    
T  29109876 ttttcctcagcagttaactgcagccggatttctaaaacttcgacagttaactgccga 29109932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 340 - 396
Target Start/End: Original strand, 29111316 - 29111372
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccga 396  Q
    |||||||| ||||||||||||| |||| |||   |||||||| ||||||||||||||    
T  29111316 ttttcctcagcagttaactgcagccggatttctaaaacttcgacagttaactgccga 29111372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 340 - 400
Target Start/End: Original strand, 31151058 - 31151118
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggag 400  Q
    ||||||| |||||||||||||| |||| |||   ||| |||| ||||||||||||||||||    
T  31151058 ttttccttggcagttaactgcagccggatttcaaaaatttcgacagttaactgccgaggag 31151118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 340 - 396
Target Start/End: Original strand, 32223533 - 32223589
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccga 396  Q
    ||||||||||  |||||||||| ||| ||||   |||||||||||||||||||||||    
T  32223533 ttttcctcggtggttaactgcagccgattttttcaaacttcggcagttaactgccga 32223589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 49; Significance: 8e-19; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 351 - 447
Target Start/End: Original strand, 27947 - 28043
Alignment:
Q  351 agttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaatgtgtcaa 447  Q
    |||||||||||||||||||   |||| ||||||| ||||||| | ||| | ||||| ||||||||||||||||||||| |||||||| |||||||||    
T  27947 agttaactgcaaccggtttctttaaaattcggcaattaactgtctaggggtatttgggtaatttactcgtgtttctcagccaaactacatgtgtcaa 28043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 344 - 443
Target Start/End: Complemental strand, 10701 - 10602
Alignment:
Q  344 cctcggcagttaactgcaaccggttttactaaa-cttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaatgt 442  Q
    |||||||||||||||||  ||||||| |||||| ||||||||||||| |||||| | |||||| ||||||||||||||||  | ||||||||| ||||||    
T  10701 cctcggcagttaactgccgccggttt-actaaaacttcggcagttaattgccgaagggcatttaagtaatttactcgtgtgacacaaccaaaccaaatgt 10603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 340 - 396
Target Start/End: Original strand, 12408 - 12464
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccga 396  Q
    ||||| |||||||||||||||| |||| |||   |||||||||||||||||||||||    
T  12408 ttttcatcggcagttaactgcagccggatttctaaaacttcggcagttaactgccga 12464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 340 - 444
Target Start/End: Complemental strand, 50100 - 49995
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaa--cttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaacta 437  Q
    |||||||||||||||||||||  ||||||   |||||  |||||||| ||||||| |||||||||||||||||||||||||||||  | || |||||| |    
T  50100 ttttcctcggcagttaactgccgccggttcc-ctaaaaacttcggcatttaactgtcgaggagcatttgagtaatttactcgtgtggcacagccaaacca 50002  T
Q  438 aatgtgt 444  Q
    |||||||    
T  50001 aatgtgt 49995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 2)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 340 - 457
Target Start/End: Complemental strand, 65371 - 65253
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccg-aggagcatttgagtaatttactcgtgtttctcaaccaaactaa 438  Q
    ||||||||| |||||||||||| ||| || |  |||| |||||||||||||||||| | ||   |||||||||||||||| ||||||||| |||||| ||    
T  65371 ttttcctcgacagttaactgcagccgattcttttaaatttcggcagttaactgccgaatgacattttgagtaatttactcatgtttctcagccaaacgaa 65272  T
Q  439 atgtgtcaatagcaatact 457  Q
    |||||| || | |||||||    
T  65271 atgtgtaaacaacaatact 65253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 340 - 434
Target Start/End: Original strand, 65423 - 65514
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaa 434  Q
    ||||| |||| ||||||||||||||||||   | | | |||||||||||| |||||||  ||||||| |||| ||||| |||||||||| |||||    
T  65423 ttttcttcggtagttaactgcaaccggtt---ccataattcggcagttaaatgccgagtggcatttgggtaaattactagtgtttctcagccaaa 65514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 340 - 422
Target Start/End: Original strand, 69241 - 69323
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgt 422  Q
    ||||| ||| |||||||||||| |||  |||   ||||||||||||||||||||||||| | |||||||||||||||||||||    
T  69241 ttttcttcgacagttaactgcatccgtatttctaaaacttcggcagttaactgccgaggggtatttgagtaatttactcgtgt 69323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 402 - 457
Target Start/End: Complemental strand, 8793 - 8738
Alignment:
Q  402 atttgagtaatttactcgtgtttctcaaccaaactaaatgtgtcaatagcaatact 457  Q
    |||| ||||||||||||||||||||||||||||| |||||||| || |||||||||    
T  8793 attttagtaatttactcgtgtttctcaaccaaaccaaatgtgtaaacagcaatact 8738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 340 - 422
Target Start/End: Original strand, 134334 - 134413
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgt 422  Q
    |||||||||| ||||||||||| ||||||   ||| | ||||||||||||||||||||||||||||  |||| ||||| ||||    
T  134334 ttttcctcggtagttaactgcagccggtt---ctataattcggcagttaactgccgaggagcatttcggtaaattactagtgt 134413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 340 - 427
Target Start/End: Complemental strand, 127554 - 127467
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctc 427  Q
    |||||||| |||||||||| |||||| || |   ||| |||||||||||||| |||| |   ||||||||||||||||||||||||||    
T  127554 ttttcctctgcagttaactacaaccgattctttaaaatttcggcagttaactaccgatggatatttgagtaatttactcgtgtttctc 127467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0513 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0513
Description:

Target: scaffold0513; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 381 - 435
Target Start/End: Complemental strand, 8211 - 8157
Alignment:
Q  381 ggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaac 435  Q
    |||||||||||||||||||| ||||| |||||||||| ||| |||||| ||||||    
T  8211 ggcagttaactgccgaggagtatttgggtaatttacttgtgattctcagccaaac 8157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0494 (Bit Score: 34; Significance: 0.0000000007; HSPs: 2)
Name: scaffold0494
Description:

Target: scaffold0494; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 374 - 443
Target Start/End: Original strand, 11508 - 11577
Alignment:
Q  374 aaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaaatgtg 443  Q
    ||||||||||||||||||||||| | ||||||  |||||||||||||||  | || |||||| |||||||    
T  11508 aaacttcggcagttaactgccgaagggcatttaggtaatttactcgtgtggcacagccaaaccaaatgtg 11577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0494; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 340 - 399
Target Start/End: Complemental strand, 5384 - 5324
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttact-aaacttcggcagttaactgccgagga 399  Q
    |||||||||||||||||||||  |||||||   | ||||||||||||||||||||||||||    
T  5384 ttttcctcggcagttaactgccgccggtttccttcaaacttcggcagttaactgccgagga 5324  T

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Target: scaffold0180 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 340 - 443
Target Start/End: Original strand, 15642 - 15745
Alignment:
Q  340 ttttcctcggcagttaactgcaaccggttttact-aaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctcaaccaaactaa 438  Q
    |||||||||||||||||||||  |||| |||||| |||||||| |||||||||||||| |  |||||  ||||  |||||||||  | ||||||||| ||    
T  15642 ttttcctcggcagttaactgccgccgg-tttactaaaacttcgacagttaactgccgaaggacattttcgtaaagtactcgtgtggcacaaccaaaccaa 15740  T
Q  439 atgtg 443  Q
    |||||    
T  15741 atgtg 15745  T

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Target: scaffold0101 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 396
Target Start/End: Original strand, 36554 - 36611
Alignment:
Q  340 ttttcctcggcagttaactgcaaccgg-ttttactaaacttcggcagttaactgccga 396  Q
    ||||||||||||||||| |||| |||| |||| | ||| |||||||||||||||||||    
T  36554 ttttcctcggcagttaattgcagccggatttttcaaaatttcggcagttaactgccga 36611  T

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Target: scaffold0219 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 342 - 370
Target Start/End: Complemental strand, 15754 - 15726
Alignment:
Q  342 ttcctcggcagttaactgcaaccggtttt 370  Q
    |||||||||||||||||||||||||||||    
T  15754 ttcctcggcagttaactgcaaccggtttt 15726  T

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Target: scaffold0192 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 344 - 428
Target Start/End: Original strand, 18923 - 19007
Alignment:
Q  344 cctcggcagttaactgcaaccggttttactaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtttctca 428  Q
    ||||||||||||||||||||| ||||    ||| ||||| ||||||||||||||  | ||||  |||| ||||| ||||||||||    
T  18923 cctcggcagttaactgcaacctgtttcttcaaaattcggtagttaactgccgagaggtatttaggtaaattactggtgtttctca 19007  T

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