View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15962_low_66 (Length: 339)

Name: NF15962_low_66
Description: NF15962
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15962_low_66
NF15962_low_66
[»] chr3 (26 HSPs)
chr3 (13-325)||(39907226-39907554)
chr3 (249-325)||(24095335-24095414)
chr3 (248-323)||(13934531-13934608)
chr3 (251-325)||(49417638-49417714)
chr3 (250-325)||(36412186-36412264)
chr3 (250-319)||(6999239-6999311)
chr3 (256-325)||(21196187-21196259)
chr3 (248-297)||(35201468-35201517)
chr3 (248-325)||(44677412-44677492)
chr3 (250-323)||(51465844-51465920)
chr3 (249-325)||(26672462-26672540)
chr3 (248-323)||(29634000-29634078)
chr3 (250-325)||(50206900-50206978)
chr3 (250-325)||(54028005-54028083)
chr3 (248-318)||(36121891-36121964)
chr3 (220-249)||(21195775-21195804)
chr3 (248-318)||(21195819-21195891)
chr3 (248-325)||(28419142-28419222)
chr3 (248-325)||(30909092-30909172)
chr3 (248-325)||(37508426-37508506)
chr3 (248-325)||(51973296-51973376)
chr3 (249-277)||(9158802-9158830)
chr3 (249-325)||(20080136-20080214)
chr3 (249-325)||(24645419-24645498)
chr3 (249-277)||(33795654-33795682)
chr3 (249-325)||(49761370-49761449)
[»] chr1 (30 HSPs)
chr1 (224-325)||(21486221-21486325)
chr1 (232-325)||(32319218-32319317)
chr1 (248-325)||(47214271-47214350)
chr1 (248-322)||(36673660-36673736)
chr1 (248-325)||(51286296-51286375)
chr1 (250-325)||(47721472-47721550)
chr1 (250-325)||(47728464-47728542)
chr1 (250-325)||(15015461-15015539)
chr1 (250-325)||(21093288-21093366)
chr1 (251-325)||(48624939-48625016)
chr1 (248-325)||(902701-902781)
chr1 (259-325)||(16987001-16987069)
chr1 (249-325)||(10889975-10890054)
chr1 (249-325)||(50882039-50882118)
chr1 (250-292)||(6143781-6143824)
chr1 (250-325)||(8200138-8200216)
chr1 (250-325)||(13489725-13489803)
chr1 (249-295)||(33358087-33358134)
chr1 (250-325)||(35136907-35136985)
chr1 (250-325)||(52362545-52362623)
chr1 (232-325)||(51466831-51466931)
chr1 (248-325)||(756919-756999)
chr1 (248-325)||(7128181-7128261)
chr1 (250-323)||(25259148-25259224)
chr1 (250-319)||(48326037-48326109)
chr1 (248-325)||(34008243-34008322)
chr1 (248-280)||(36494562-36494594)
chr1 (248-324)||(38303616-38303695)
chr1 (249-325)||(45417835-45417914)
chr1 (250-318)||(50328071-50328142)
[»] chr8 (19 HSPs)
chr8 (248-325)||(1871543-1871622)
chr8 (248-294)||(18651457-18651503)
chr8 (248-323)||(36531660-36531737)
chr8 (248-325)||(7478843-7478922)
chr8 (248-325)||(7586091-7586170)
chr8 (249-325)||(30439435-30439514)
chr8 (250-325)||(16872086-16872164)
chr8 (250-325)||(37597301-37597379)
chr8 (251-325)||(41159820-41159897)
chr8 (248-325)||(36110201-36110281)
chr8 (248-325)||(45529174-45529254)
chr8 (248-325)||(40739841-40739920)
chr8 (250-325)||(36885418-36885495)
chr8 (248-325)||(1633818-1633898)
chr8 (248-325)||(16966848-16966928)
chr8 (248-325)||(32843870-32843949)
chr8 (250-278)||(4658184-4658212)
chr8 (249-325)||(4994444-4994523)
chr8 (246-282)||(6968159-6968195)
[»] chr4 (33 HSPs)
chr4 (248-325)||(41082381-41082460)
chr4 (248-325)||(54669512-54669591)
chr4 (248-325)||(31076117-31076196)
chr4 (251-297)||(41389804-41389850)
chr4 (248-325)||(9118792-9118872)
chr4 (248-325)||(37066051-37066130)
chr4 (250-325)||(28458307-28458385)
chr4 (250-325)||(32696244-32696322)
chr4 (250-325)||(46405904-46405982)
chr4 (250-325)||(49896596-49896674)
chr4 (248-319)||(17475946-17476019)
chr4 (248-325)||(30079909-30079989)
chr4 (251-319)||(12138922-12138993)
chr4 (249-325)||(28657370-28657449)
chr4 (250-325)||(45143603-45143679)
chr4 (250-325)||(45152372-45152448)
chr4 (249-292)||(56271458-56271502)
chr4 (250-325)||(2999175-2999253)
chr4 (248-323)||(12112692-12112770)
chr4 (250-325)||(13086085-13086163)
chr4 (250-325)||(22819712-22819790)
chr4 (250-325)||(43769774-43769852)
chr4 (253-325)||(51852139-51852213)
chr4 (248-283)||(55601636-55601671)
chr4 (251-325)||(27326683-27326760)
chr4 (248-318)||(51194339-51194412)
chr4 (220-274)||(6494528-6494586)
chr4 (249-278)||(13104311-13104340)
chr4 (248-325)||(14451456-14451536)
chr4 (248-325)||(41486071-41486151)
chr4 (250-323)||(51887728-51887804)
chr4 (249-325)||(1815930-1816008)
chr4 (251-320)||(2256262-2256333)
[»] chr5 (20 HSPs)
chr5 (248-325)||(37700523-37700602)
chr5 (224-325)||(18842221-18842329)
chr5 (248-325)||(2224853-2224934)
chr5 (250-325)||(38704127-38704205)
chr5 (249-323)||(15952974-15953051)
chr5 (249-325)||(9581642-9581721)
chr5 (249-325)||(41175635-41175714)
chr5 (250-325)||(8675363-8675441)
chr5 (250-325)||(20770194-20770272)
chr5 (248-325)||(5042311-5042391)
chr5 (248-318)||(42267416-42267488)
chr5 (249-325)||(10649498-10649577)
chr5 (250-325)||(1839275-1839353)
chr5 (250-325)||(19839916-19839994)
chr5 (250-325)||(34124684-34124762)
chr5 (251-325)||(15478721-15478798)
chr5 (248-325)||(2688914-2688994)
chr5 (249-325)||(3640126-3640205)
chr5 (257-325)||(9226364-9226434)
chr5 (232-318)||(10865388-10865479)
[»] chr7 (26 HSPs)
chr7 (248-318)||(26041248-26041320)
chr7 (248-325)||(39823872-39823951)
chr7 (248-325)||(44495026-44495105)
chr7 (248-325)||(47078180-47078259)
chr7 (222-325)||(39332048-39332158)
chr7 (249-325)||(7817700-7817778)
chr7 (253-325)||(12645843-12645918)
chr7 (249-325)||(41458659-41458738)
chr7 (250-325)||(28036807-28036885)
chr7 (248-298)||(46148084-46148134)
chr7 (248-325)||(21023045-21023125)
chr7 (251-292)||(23048331-23048372)
chr7 (248-325)||(37808692-37808772)
chr7 (248-325)||(39231656-39231736)
chr7 (257-325)||(35588828-35588899)
chr7 (249-325)||(43482587-43482665)
chr7 (250-325)||(11564956-11565033)
chr7 (251-325)||(44184490-44184567)
chr7 (248-325)||(3293192-3293272)
chr7 (248-325)||(19786007-19786087)
chr7 (248-325)||(32815231-32815311)
chr7 (248-325)||(38779672-38779752)
chr7 (249-325)||(3062393-3062472)
chr7 (249-325)||(35452502-35452581)
chr7 (249-277)||(42926253-42926281)
chr7 (249-325)||(46532565-46532644)
[»] chr2 (23 HSPs)
chr2 (248-297)||(5200154-5200203)
chr2 (249-325)||(40936993-40937072)
chr2 (251-325)||(35705557-35705633)
chr2 (253-325)||(2221056-2221131)
chr2 (253-325)||(15269924-15269999)
chr2 (248-311)||(4753238-4753303)
chr2 (249-318)||(6895964-6896036)
chr2 (248-318)||(28679387-28679459)
chr2 (248-325)||(31389610-31389690)
chr2 (256-325)||(34119588-34119660)
chr2 (249-313)||(5054683-5054750)
chr2 (250-325)||(22525926-22526002)
chr2 (250-325)||(23352837-23352913)
chr2 (249-325)||(42866813-42866892)
chr2 (250-325)||(35589317-35589395)
chr2 (248-325)||(433913-433993)
chr2 (256-325)||(9377519-9377591)
chr2 (251-325)||(28245791-28245867)
chr2 (249-278)||(29712091-29712120)
chr2 (248-325)||(29879905-29879985)
chr2 (249-325)||(42678812-42678892)
chr2 (248-325)||(26738809-26738888)
chr2 (249-325)||(36211989-36212067)
[»] chr6 (17 HSPs)
chr6 (248-325)||(13658895-13658974)
chr6 (250-325)||(6531110-6531191)
chr6 (250-325)||(1369423-1369501)
chr6 (250-325)||(13143312-13143390)
chr6 (248-325)||(2075379-2075459)
chr6 (248-325)||(3199023-3199102)
chr6 (249-325)||(14699593-14699672)
chr6 (251-325)||(754369-754446)
chr6 (251-321)||(2943501-2943574)
chr6 (251-325)||(4820314-4820393)
chr6 (248-325)||(11547457-11547537)
chr6 (248-281)||(22341103-22341136)
chr6 (253-326)||(28944912-28944988)
chr6 (250-319)||(32459446-32459518)
chr6 (248-323)||(335128-335204)
chr6 (249-325)||(18141230-18141309)
chr6 (249-325)||(26832709-26832788)
[»] scaffold0014 (1 HSPs)
scaffold0014 (247-325)||(122894-122974)
[»] scaffold0532 (1 HSPs)
scaffold0532 (249-325)||(11027-11106)
[»] scaffold0471 (1 HSPs)
scaffold0471 (248-325)||(70-150)


Alignment Details
Target: chr3 (Bit Score: 213; Significance: 1e-117; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 13 - 325
Target Start/End: Original strand, 39907226 - 39907554
Alignment:
Q  13 aaaatgtaaaatgtttcttaatacacctcaatagttttaaaaatatataatgaaaataaggtgttgaatgagtgaaagaaaatttcagtttccaaaatat 112  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39907226 aaaatgtaaaatgtttcttaatacaccttaatagttgtaaaaatatataatgaaaataaggtgttgaatgagtgaaagaaaatttcagtttccaaaatat 39907325  T
Q  113 cattgttgaaagatgactggtattttgatatcctatttgttgttgacaacctatattttgtgtcttcaaaatggtaagcacataaacct----------- 201  Q
    ||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||               
T  39907326 cattgttgaaagaggactggtattttgacatcctatttgttgttgacaacctatattttgtgtcttcaaaatggtaagcatgtaaacctaagtagatgaa 39907425  T
Q  202 -aagtagatgaaaaaatattaaagaggagtattatttgaacaatc-aattgacaaccataatttac-aaagaaaaagtagtattagcacgaaaatcata- 297  Q
     |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| |||||||||| ||  |||| ||||||||     
T  39907426 aaagtagatgaaaaaatattaaagaggagtattatttgaacaatcaaattgacaaccataatttacaaaaaaaaaagtagtgttgacacggaaatcatag 39907525  T
Q  298 -aatagagaaataaagtgaaaaataatgt 325  Q
     |||||||||||||||| |||||||||||    
T  39907526 caatagagaaataaagtaaaaaataatgt 39907554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 249 - 325
Target Start/End: Original strand, 24095335 - 24095414
Alignment:
Q  249 tgacaaccataatttacaaagaaaaagta-gtattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||| || |  |||||||||||||||| |||||||||||    
T  24095335 tgacaaccataatttacaaagaaaaagtaggtatttgcacgaaaaccaaagcaatagagaaataaagtaaaaaataatgt 24095414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 248 - 323
Target Start/End: Original strand, 13934531 - 13934608
Alignment:
Q  248 ttgacaaccataatttacaaagaaaaagtagtattagcacgaaaatcata--aatagagaaataaagtgaaaaataat 323  Q
    |||| ||||||||||||||||||||||||| |||| ||||| ||| ||||  |||||||||||||||| |||||||||    
T  13934531 ttgataaccataatttacaaagaaaaagtattattggcacggaaaccataacaatagagaaataaagtaaaaaataat 13934608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 251 - 325
Target Start/End: Complemental strand, 49417714 - 49417638
Alignment:
Q  251 acaaccataatttacaaagaaaaagtagtattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    ||||||| |||||||||||||||||||||||| ||||| ||| ||||  |||||||| ||||| | |||||||||||    
T  49417714 acaaccaaaatttacaaagaaaaagtagtattggcacggaaaccatagcaatagagagataaaataaaaaataatgt 49417638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 250 - 325
Target Start/End: Complemental strand, 36412264 - 36412186
Alignment:
Q  250 gacaaccataatttacaaagaaaaagta-gtattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    ||||||||||||||||||||||| | || ||||| |||||||||||| |  |||||||||||||||| || ||||||||    
T  36412264 gacaaccataatttacaaagaaagaatatgtatttgcacgaaaatcaaagcaatagagaaataaagtaaataataatgt 36412186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 250 - 319
Target Start/End: Complemental strand, 6999311 - 6999239
Alignment:
Q  250 gacaaccataatttacaaagaaaaagta-gtattagcacgaaaatcata--aatagagaaataaagtgaaaaa 319  Q
    |||||||||||||||||| |||||| || ||||| |||||||||||| |  |||||||||||||||| |||||    
T  6999311 gacaaccataatttacaatgaaaaaatatgtatttgcacgaaaatcaaagcaatagagaaataaagtaaaaaa 6999239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 256 - 325
Target Start/End: Complemental strand, 21196259 - 21196187
Alignment:
Q  256 cataatttacaaagaaaaagta-gtattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    ||||||||||||||||||| || ||||| |||||||||||| |  |||||||| ||||||| |||||||||||    
T  21196259 cataatttacaaagaaaaaatatgtatttgcacgaaaatcaaagtaatagagagataaagtaaaaaataatgt 21196187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 248 - 297
Target Start/End: Original strand, 35201468 - 35201517
Alignment:
Q  248 ttgacaaccataatttacaaagaaaaagtagtattagcacgaaaatcata 297  Q
    ||||||| |||||||||||||||||||||||||||  |||||||| ||||    
T  35201468 ttgacaatcataatttacaaagaaaaagtagtattgacacgaaaaccata 35201517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 248 - 325
Target Start/End: Original strand, 44677412 - 44677492
Alignment:
Q  248 ttgacaaccataatttacaaag-aaaaagtagtattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    |||||||||||| ||||||||| ||||||| ||||| ||||| ||| ||||  |||||||| ||||||| |||||||||||    
T  44677412 ttgacaaccatactttacaaagaaaaaagtggtattggcacggaaaccatagcaatagagagataaagtaaaaaataatgt 44677492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 250 - 323
Target Start/End: Original strand, 51465844 - 51465920
Alignment:
Q  250 gacaaccataatttacaaagaaaaag-tagtattagcacgaaaatcata--aatagagaaataaagtgaaaaataat 323  Q
    |||||||||||||||||||||||||| | ||||| |||||||||||| |  |||||||| ||||||| |||| ||||    
T  51465844 gacaaccataatttacaaagaaaaagttggtatttgcacgaaaatcaaagcaatagagagataaagtaaaaagtaat 51465920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 325
Target Start/End: Complemental strand, 26672540 - 26672462
Alignment:
Q  249 tgacaaccataatttacaaagaaaaagt-agtattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    |||||||||||||||||||||||||||| |||||| ||||  |||||| |  |||||||| ||||||| |||||||||||    
T  26672540 tgacaaccataatttacaaagaaaaagtaagtatttgcacagaaatcaaaacaatagagagataaagt-aaaaataatgt 26672462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 248 - 323
Target Start/End: Original strand, 29634000 - 29634078
Alignment:
Q  248 ttgacaaccataatttacaaag-aaaaagtagtattagcacgaaaatcata--aatagagaaataaagtgaaaaataat 323  Q
    |||||||||||| ||||||||| ||||||| ||||| ||||| ||||||||  |||||||| |||| || |||||||||    
T  29634000 ttgacaaccatattttacaaagaaaaaagtggtatttgcacggaaatcatatcaatagagagataatgtaaaaaataat 29634078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 250 - 325
Target Start/End: Original strand, 50206900 - 50206978
Alignment:
Q  250 gacaaccataatttacaaagaaaaagtag-tattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    ||||||||||||||||||||||||||| | |||| ||||||||| || |  |||||||| ||||||| |||| ||||||    
T  50206900 gacaaccataatttacaaagaaaaagttgatatttgcacgaaaaccaaaacaatagagagataaagtaaaaagtaatgt 50206978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 250 - 325
Target Start/End: Complemental strand, 54028083 - 54028005
Alignment:
Q  250 gacaaccataatttacaaaga-aaaagtagtattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    |||||||||| |||||||||| |||||| |||||  |||| ||||||||  |||||||| ||||||| |||||||||||    
T  54028083 gacaaccatactttacaaagaaaaaagtggtattgacacggaaatcataacaatagagagataaagtaaaaaataatgt 54028005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 248 - 318
Target Start/End: Complemental strand, 36121964 - 36121891
Alignment:
Q  248 ttgacaaccataatttacaaagaaaaa-gtagtattagcacgaaaatcata--aatagagaaataaagtgaaaa 318  Q
    |||||||||||| |||||||||||||| || ||||| |||| |||||||||  |||||||| ||||||| ||||    
T  36121964 ttgacaaccatattttacaaagaaaaatgtggtattggcacaaaaatcatagcaatagagagataaagtaaaaa 36121891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 249
Target Start/End: Original strand, 21195775 - 21195804
Alignment:
Q  220 taaagaggagtattatttgaacaatcaatt 249  Q
    ||||||||||||||||||||||||||||||    
T  21195775 taaagaggagtattatttgaacaatcaatt 21195804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 318
Target Start/End: Original strand, 21195819 - 21195891
Alignment:
Q  248 ttgacaaccataatttacaaagaaaaagtagtattagcacgaaaatcata--aatagagaaataaagtgaaaa 318  Q
    |||||||| |||||||| |||| ||||||||||||  |||| ||||||||  |||||||| ||||||| ||||    
T  21195819 ttgacaactataatttataaaggaaaagtagtattgacacggaaatcatagcaatagagagataaagtaaaaa 21195891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 325
Target Start/End: Original strand, 28419142 - 28419222
Alignment:
Q  248 ttgacaaccataatttacaaag-aaaaagtagtattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    |||||||||||| ||||||||| ||||||| ||||| ||| | ||| ||||  |||||||| ||||||| |||||||||||    
T  28419142 ttgacaaccatattttacaaagaaaaaagtggtattggcatggaaaccataacaatagagagataaagtaaaaaataatgt 28419222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 325
Target Start/End: Complemental strand, 30909172 - 30909092
Alignment:
Q  248 ttgacaaccataatttacaaaga-aaaagtagtattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    ||||||| |||| |||||||||| |||||| ||||| ||||||||| ||||  |||||||| ||||||| |||| ||||||    
T  30909172 ttgacaatcatattttacaaagaaaaaagtggtattggcacgaaaaccataacaatagagagataaagtaaaaagtaatgt 30909092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 325
Target Start/End: Original strand, 37508426 - 37508506
Alignment:
Q  248 ttgacaaccataatttacaaag-aaaaagtagtattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    |||||||||||| ||||||||| ||||||| ||||| ||||| ||| ||||  |||||||| ||||||| |||| ||||||    
T  37508426 ttgacaaccatattttacaaagaaaaaagtggtattggcacggaaaccatagcaatagagagataaagtaaaaagtaatgt 37508506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 325
Target Start/End: Original strand, 51973296 - 51973376
Alignment:
Q  248 ttgacaaccataatttacaaagaaaaag-tagtattagcacgaaaatcataa--atagagaaataaagtgaaaaataatgt 325  Q
    |||||||||||||||||||||||||||  |||||||  ||  |||| |||||  ||||||| ||||||| |||||||||||    
T  51973296 ttgacaaccataatttacaaagaaaaaaatagtattgacataaaaaccataacaatagagagataaagttaaaaataatgt 51973376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 249 - 277
Target Start/End: Original strand, 9158802 - 9158830
Alignment:
Q  249 tgacaaccataatttacaaagaaaaagta 277  Q
    |||||||||||||||||||||||||||||    
T  9158802 tgacaaccataatttacaaagaaaaagta 9158830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 249 - 325
Target Start/End: Complemental strand, 20080214 - 20080136
Alignment:
Q  249 tgacaaccataatttacaaagaaaaagta-gtattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    |||||||||||||||| |||||||||||| ||||| ||||| ||| || |  |||||||| ||||||| |||||||||||    
T  20080214 tgacaaccataatttataaagaaaaagtaggtatttgcacggaaaccaaaacaatagagagataaagt-aaaaataatgt 20080136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 249 - 325
Target Start/End: Complemental strand, 24645498 - 24645419
Alignment:
Q  249 tgacaaccataatttacaaagaaaaagta-gtattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    |||||||||||||||||||||||||| || ||| | ||||||||| || |  |||||||| ||||||| |||| ||||||    
T  24645498 tgacaaccataatttacaaagaaaaaataggtacttgcacgaaaaccaaaacaatagagagataaagtaaaaagtaatgt 24645419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 249 - 277
Target Start/End: Original strand, 33795654 - 33795682
Alignment:
Q  249 tgacaaccataatttacaaagaaaaagta 277  Q
    |||||||||||||||||||||||||||||    
T  33795654 tgacaaccataatttacaaagaaaaagta 33795682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 249 - 325
Target Start/End: Complemental strand, 49761449 - 49761370
Alignment:
Q  249 tgacaaccataatttacaaagaaaaagta-gtattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    |||||| ||||||||| |||||||||||| ||||| |||| |||| || |  |||||||| ||||||| |||||||||||    
T  49761449 tgacaatcataatttataaagaaaaagtaggtatttgcacaaaaaccaaagcaatagagagataaagtaaaaaataatgt 49761370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 50; Significance: 1e-19; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 224 - 325
Target Start/End: Original strand, 21486221 - 21486325
Alignment:
Q  224 gaggagtattatttgaacaatcaatt-gacaaccataatttacaaagaaaaagtagtattagcacgaaaatcata--aatagagaaataaagtgaaaaat 320  Q
    ||||||| |||||||||||| ||||| ||||||||| ||||| ||||||||||||||||| ||||| ||| ||||  |||||||| ||||||| ||||||    
T  21486221 gaggagtgttatttgaacaaccaatttgacaaccatgatttataaagaaaaagtagtattggcacggaaaccatagcaatagagagataaagtaaaaaat 21486320  T
Q  321 aatgt 325  Q
    |||||    
T  21486321 aatgt 21486325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 232 - 325
Target Start/End: Original strand, 32319218 - 32319317
Alignment:
Q  232 ttatttgaacaatcaatt----gacaaccataatttacaaagaaaaagtagtattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    ||||||||||||||||||    |||||||||||||||||||||||||||||||||  |||| ||| ||||  |||||||| || ||||||||||||||||    
T  32319218 ttatttgaacaatcaatttgatgacaaccataatttacaaagaaaaagtagtattgacacggaaaccatagtaatagagagatgaagtgaaaaataatgt 32319317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 248 - 325
Target Start/End: Complemental strand, 47214350 - 47214271
Alignment:
Q  248 ttgacaaccataatttacaaagaaaaagtagtattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    |||||||||| |||||||||||||||||||||||| ||||| ||| ||||  |||||||| ||||||| |||||||||||    
T  47214350 ttgacaaccaaaatttacaaagaaaaagtagtattggcacggaaaccataacaatagagagataaagtaaaaaataatgt 47214271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 248 - 322
Target Start/End: Original strand, 36673660 - 36673736
Alignment:
Q  248 ttgacaaccataatttacaaagaaaaagtagtattagcacgaaaatcata--aatagagaaataaagtgaaaaataa 322  Q
    |||||||||||||||||||||||||||||||||||  |||| ||| ||||  |||||||| ||||||| ||||||||    
T  36673660 ttgacaaccataatttacaaagaaaaagtagtattgacacggaaaccatagcaatagagagataaagtaaaaaataa 36673736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 248 - 325
Target Start/End: Original strand, 51286296 - 51286375
Alignment:
Q  248 ttgacaaccataatttacaaagaaaaagtagtattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    |||||||||| |||||||||||||||||||||||| ||||| ||| ||||  |||||||| ||||| | |||||||||||    
T  51286296 ttgacaaccaaaatttacaaagaaaaagtagtattggcacggaaaccatagcaatagagagataaaataaaaaataatgt 51286375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 250 - 325
Target Start/End: Complemental strand, 47721550 - 47721472
Alignment:
Q  250 gacaaccataatttacaaagaaaaagt-agtattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    ||||||||||||||||||||||||||| ||||||  ||||||||||| |  |||||||| ||||||| |||||||||||    
T  47721550 gacaaccataatttacaaagaaaaagtaagtattgacacgaaaatcaaagcaatagagagataaagtaaaaaataatgt 47721472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 250 - 325
Target Start/End: Complemental strand, 47728542 - 47728464
Alignment:
Q  250 gacaaccataatttacaaagaaaaagt-agtattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    ||||||||||||||||||||||||||| ||||||  ||||||||||| |  |||||||| ||||||| |||||||||||    
T  47728542 gacaaccataatttacaaagaaaaagtaagtattgacacgaaaatcaaagcaatagagagataaagtaaaaaataatgt 47728464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 250 - 325
Target Start/End: Complemental strand, 15015539 - 15015461
Alignment:
Q  250 gacaaccataatttacaaagaaaaag-tagtattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    |||||||||||||||||||||||||| | ||||| ||||||||| || |  |||||||| ||||||| |||||||||||    
T  15015539 gacaaccataatttacaaagaaaaagttggtatttgcacgaaaaccaaaacaatagagatataaagtaaaaaataatgt 15015461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 250 - 325
Target Start/End: Original strand, 21093288 - 21093366
Alignment:
Q  250 gacaaccataatttacaaagaaaaagtag-tattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    ||||||||||||||||||||||||||||| |||||  |||||||||| |  |||||||| ||||| | |||||||||||    
T  21093288 gacaaccataatttacaaagaaaaagtagatattaatacgaaaatcaaagcaatagagagataaaataaaaaataatgt 21093366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 325
Target Start/End: Complemental strand, 48625016 - 48624939
Alignment:
Q  251 acaaccataatttacaaagaaaaagta-gtattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    |||||||||||||| |||||||||||| ||||| ||| |||||||| |  |||||||| ||||||| |||||||||||    
T  48625016 acaaccataatttataaagaaaaagtatgtatttgcatgaaaatcaaagcaatagagagataaagtaaaaaataatgt 48624939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 248 - 325
Target Start/End: Complemental strand, 902781 - 902701
Alignment:
Q  248 ttgacaaccataatttacaaagaaaaa-gtagtattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    ||||||| |||| |||||||||||||| || ||||||||||| ||||||||  |||||||| ||||||| |||| ||||||    
T  902781 ttgacaatcatattttacaaagaaaaaagtggtattagcacggaaatcatagcaatagagagataaagtaaaaagtaatgt 902701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 259 - 325
Target Start/End: Complemental strand, 16987069 - 16987001
Alignment:
Q  259 aatttacaaagaaaaagtagtattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    ||||||||||||||||||||||||  |||| ||||||||  |||||| | ||||||| |||||||||||    
T  16987069 aatttacaaagaaaaagtagtattgacacggaaatcatagcaatagaaagataaagtaaaaaataatgt 16987001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 325
Target Start/End: Original strand, 10889975 - 10890054
Alignment:
Q  249 tgacaaccataatttacaaagaaaaag-tagtattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    ||||||||||||||||||||||||||| | ||||  |||||||||||| |  |||||||| ||||||| |||| ||||||    
T  10889975 tgacaaccataatttacaaagaaaaagttggtatgtgcacgaaaatcaaagcaatagagagataaagtaaaaagtaatgt 10890054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 325
Target Start/End: Original strand, 50882039 - 50882118
Alignment:
Q  249 tgacaaccataatttacaaagaaaaagt-agtattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    |||||| ||||||||| ||||||||| | |||||| |||||||||||| |  |||||||| ||||||| |||||||||||    
T  50882039 tgacaatcataatttataaagaaaaaatgagtatttgcacgaaaatcaaagtaatagagagataaagtaaaaaataatgt 50882118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 250 - 292
Target Start/End: Complemental strand, 6143824 - 6143781
Alignment:
Q  250 gacaaccataatttacaaagaaaaagta-gtattagcacgaaaa 292  Q
    |||||||||||||||||||||||||||| ||||| |||||||||    
T  6143824 gacaaccataatttacaaagaaaaagtaggtatttgcacgaaaa 6143781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 250 - 325
Target Start/End: Complemental strand, 8200216 - 8200138
Alignment:
Q  250 gacaaccataatttacaaagaaaaagta-gtattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    |||||||||||||||||||||||||||| ||| | ||||||||| || |  |||||||  ||||||| |||||||||||    
T  8200216 gacaaccataatttacaaagaaaaagtacgtagttgcacgaaaaccaaagcaatagagggataaagtaaaaaataatgt 8200138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 250 - 325
Target Start/End: Complemental strand, 13489803 - 13489725
Alignment:
Q  250 gacaaccataatttacaaagaaaaag-tagtattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    |||||||||||||||||||||||||| | ||||| ||||||||| || |  |||||||| ||||||| |||| ||||||    
T  13489803 gacaaccataatttacaaagaaaaagttggtatttgcacgaaaaccaaagcaatagagagataaagtaaaaagtaatgt 13489725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 249 - 295
Target Start/End: Original strand, 33358087 - 33358134
Alignment:
Q  249 tgacaaccataatttacaaagaaaaagt-agtattagcacgaaaatca 295  Q
    ||||||||||||||||||||||||||||  ||||| ||||||||||||    
T  33358087 tgacaaccataatttacaaagaaaaagtgggtatttgcacgaaaatca 33358134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 250 - 325
Target Start/End: Complemental strand, 35136985 - 35136907
Alignment:
Q  250 gacaaccataatttacaaagaaaaag-tagtattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    |||||||||||||||||||||||||| | ||||| |||| ||||||| |  |||||||| ||||||| |||| ||||||    
T  35136985 gacaaccataatttacaaagaaaaagtttgtatttgcacaaaaatcaaagcaatagagagataaagtaaaaagtaatgt 35136907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 250 - 325
Target Start/End: Complemental strand, 52362623 - 52362545
Alignment:
Q  250 gacaaccataatttacaaagaaaaag-tagtattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    ||||||||||||||| |||||||||| | ||||| ||||||||| || |  |||||||| ||||||| |||||||||||    
T  52362623 gacaaccataatttataaagaaaaagttggtatttgcacgaaaaccaaagcaatagagagataaagtaaaaaataatgt 52362545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 325
Target Start/End: Complemental strand, 51466931 - 51466831
Alignment:
Q  232 ttatttgaacaatcaatt-----gacaaccataatttacaaagaaaaagta-gtattagcacgaaaatcata--aatagagaaataaagtgaaaaataat 323  Q
    ||||||||||||||||||     ||||||||||||||| |||||||||||| ||||| | ||| |||||| |  |||||||| ||||||| |||||||||    
T  51466931 ttatttgaacaatcaatttggttgacaaccataatttataaagaaaaagtaggtatttgtacggaaatcaaaacaatagagagataaagt-aaaaataat 51466833  T
Q  324 gt 325  Q
    ||    
T  51466832 gt 51466831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 325
Target Start/End: Complemental strand, 756999 - 756919
Alignment:
Q  248 ttgacaaccataatttacaaaga-aaaagtagtattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    |||||||||||| |||||||||| |||| | ||||| ||||| ||| ||||  |||||||| ||||||| |||||||||||    
T  756999 ttgacaaccatactttacaaagaaaaaaatggtattggcacggaaaccatagcaatagagagataaagtaaaaaataatgt 756919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 325
Target Start/End: Complemental strand, 7128261 - 7128181
Alignment:
Q  248 ttgacaaccataatttacaaaga-aaaagtagtattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    |||||||||||| |||||||||| |||||| ||||| ||||| ||| ||||  |||||||| |||||||  ||||||||||    
T  7128261 ttgacaaccatactttacaaagaaaaaagtggtattggcacggaaaccatagcaatagagagataaagtagaaaataatgt 7128181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 323
Target Start/End: Complemental strand, 25259224 - 25259148
Alignment:
Q  250 gacaaccataatttacaaagaaaaagtag-tattagcacgaaaatcataa--atagagaaataaagtgaaaaataat 323  Q
    ||||||||||||||| ||||||||| | | |||| ||| |||||||| ||  ||||||||||||||| |||||||||    
T  25259224 gacaaccataatttataaagaaaaaattggtatttgcatgaaaatcaaaacaatagagaaataaagtaaaaaataat 25259148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 319
Target Start/End: Complemental strand, 48326109 - 48326037
Alignment:
Q  250 gacaaccataatttacaaagaaaaag-tagtattagcacgaaaatcata--aatagagaaataaagtgaaaaa 319  Q
    |||||||||||||||||||||||||| | ||||| | |||||||||| |  |||||||| ||||||| |||||    
T  48326109 gacaaccataatttacaaagaaaaagttggtatttgtacgaaaatcaaagcaatagagagataaagtaaaaaa 48326037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 325
Target Start/End: Complemental strand, 34008322 - 34008243
Alignment:
Q  248 ttgacaaccataatttacaaagaaaaagtagtattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    |||||||| | |||||||||||||||||||||||| ||| | ||| ||||  |||||  | ||||||| |||||||||||    
T  34008322 ttgacaactaaaatttacaaagaaaaagtagtattggcatggaaaccatagtaatagtaagataaagtaaaaaataatgt 34008243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 280
Target Start/End: Complemental strand, 36494594 - 36494562
Alignment:
Q  248 ttgacaaccataatttacaaagaaaaagtagta 280  Q
    ||||||| |||||||||||||||||||||||||    
T  36494594 ttgacaatcataatttacaaagaaaaagtagta 36494562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 324
Target Start/End: Original strand, 38303616 - 38303695
Alignment:
Q  248 ttgacaaccataatttacaaag-aaaaagtagtattagcacgaaaatcat--aaatagagaaataaagtgaaaaataatg 324  Q
    |||||||||||| ||||||||| ||||||| ||||| ||||| ||| |||   |||||||| ||||||| ||||||||||    
T  38303616 ttgacaaccatattttacaaagaaaaaagtggtattggcacggaaaccatggcaatagagagataaagtaaaaaataatg 38303695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 249 - 325
Target Start/End: Complemental strand, 45417914 - 45417835
Alignment:
Q  249 tgacaaccataatttacaaagaaaaagta-gtattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    |||||||||||||||| ||||||||| || ||||| |||||||||||| |  |||||||| ||||| | |||||| ||||    
T  45417914 tgacaaccataatttataaagaaaaaatatgtatttgcacgaaaatcaaaacaatagagagataaattaaaaaatgatgt 45417835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 250 - 318
Target Start/End: Original strand, 50328071 - 50328142
Alignment:
Q  250 gacaaccataatttacaaagaaaaag-tagtattagcacgaaaatcata--aatagagaaataaagtgaaaa 318  Q
    |||||||||||||||||||||||||| | ||||| ||||||||| || |  |||||||| ||||||| ||||    
T  50328071 gacaaccataatttacaaagaaaaagttggtatttgcacgaaaaccaaagcaatagagagataaagtaaaaa 50328142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 49; Significance: 5e-19; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 248 - 325
Target Start/End: Original strand, 1871543 - 1871622
Alignment:
Q  248 ttgacaaccataatttacaaagaaaaagtagtattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    ||||||||||||||||||||||||||||| ||||| ||||| ||| ||||  |||||||| |||||||||||||||||||    
T  1871543 ttgacaaccataatttacaaagaaaaagttgtattcgcacggaaaccataacaatagagagataaagtgaaaaataatgt 1871622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 248 - 294
Target Start/End: Complemental strand, 18651503 - 18651457
Alignment:
Q  248 ttgacaaccataatttacaaagaaaaagtagtattagcacgaaaatc 294  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||    
T  18651503 ttgacaaccataatttacaaagaaaaagtagtattggcacgaaaatc 18651457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 248 - 323
Target Start/End: Complemental strand, 36531737 - 36531660
Alignment:
Q  248 ttgacaaccataatttacaaagaaaaagtagtattagcacgaaaatcata--aatagagaaataaagtgaaaaataat 323  Q
    ||||||| || |||||||||||||||||||||||| ||||| ||||||||  |||||||| ||||||| |||||||||    
T  36531737 ttgacaatcaaaatttacaaagaaaaagtagtattggcacggaaatcataacaatagagagataaagtaaaaaataat 36531660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 248 - 325
Target Start/End: Complemental strand, 7478922 - 7478843
Alignment:
Q  248 ttgacaaccataatttacaaagaaaaagtagtattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    ||||||| ||||||||||||||||||||||||||| ||||| ||| ||||  |||||||| |||| || |||||||||||    
T  7478922 ttgacaatcataatttacaaagaaaaagtagtattggcacggaaaccatagcaatagagagataaggtaaaaaataatgt 7478843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 248 - 325
Target Start/End: Original strand, 7586091 - 7586170
Alignment:
Q  248 ttgacaaccataatttacaaagaaaaagtagtattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    |||||||| |||||||||||||||||||||| ||| ||||| ||| ||||  |||||||| ||||||| |||||||||||    
T  7586091 ttgacaactataatttacaaagaaaaagtagcattggcacggaaaacatatcaatagagagataaagtaaaaaataatgt 7586170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 249 - 325
Target Start/End: Original strand, 30439435 - 30439514
Alignment:
Q  249 tgacaaccataatttacaaagaaaaagt-agtattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    |||||||||||||||||||||||||| | |||||| |||||||||||| |  |||||||| ||||||| |||||||||||    
T  30439435 tgacaaccataatttacaaagaaaaaatgagtatttgcacgaaaatcaaagcaatagagagataaagtaaaaaataatgt 30439514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 250 - 325
Target Start/End: Original strand, 16872086 - 16872164
Alignment:
Q  250 gacaaccataatttacaaagaaaaagtag-tattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    ||||||||||||||||||||||||||| | |||| |||||||||||| |  |||||||| ||||||| |||| ||||||    
T  16872086 gacaaccataatttacaaagaaaaagttgatatttgcacgaaaatcaaagcaatagagagataaagtaaaaagtaatgt 16872164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 250 - 325
Target Start/End: Complemental strand, 37597379 - 37597301
Alignment:
Q  250 gacaaccataatttacaaagaaaaagta-gtattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    |||||||||||||||||||||||| ||| | |||  ||||||||||| |  |||||||||||||||| |||||||||||    
T  37597379 gacaaccataatttacaaagaaaaggtagggatttacacgaaaatcaaagcaatagagaaataaagtaaaaaataatgt 37597301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 325
Target Start/End: Original strand, 41159820 - 41159897
Alignment:
Q  251 acaaccataatttacaaagaaaaagta-gtattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    |||||||||||||||||||||||| || ||||| ||||||||| || |  |||||||| ||||||| |||||||||||    
T  41159820 acaaccataatttacaaagaaaaaataggtatttgcacgaaaaccaaagcaatagagagataaagtaaaaaataatgt 41159897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 248 - 325
Target Start/End: Complemental strand, 36110281 - 36110201
Alignment:
Q  248 ttgacaaccataatttacaaaga-aaaagtagtattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    |||||||||||| |||||||||| |||||| ||||| ||||||||| ||||  |||||||| ||||||| |||| ||||||    
T  36110281 ttgacaaccatattttacaaagaaaaaagtggtattggcacgaaaaccataacaatagagagataaagtaaaaagtaatgt 36110201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 248 - 325
Target Start/End: Original strand, 45529174 - 45529254
Alignment:
Q  248 ttgacaaccataatttacaaag-aaaaagtagtattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    |||||||||||| ||||||||| ||||||| ||||| ||||| ||| ||||  |||||||| ||||||| |||||||||||    
T  45529174 ttgacaaccatattttacaaagaaaaaagtggtattggcacggaaaccatagcaatagagagataaagtaaaaaataatgt 45529254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 325
Target Start/End: Original strand, 40739841 - 40739920
Alignment:
Q  248 ttgacaaccataatttacaaagaaaaagtagtattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    |||| ||||||| |||||||||||||| | ||||| ||||| ||| ||||  |||||||| ||||||| |||||||||||    
T  40739841 ttgataaccatattttacaaagaaaaaatggtattggcacggaaaccataacaatagagagataaagtaaaaaataatgt 40739920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 250 - 325
Target Start/End: Original strand, 36885418 - 36885495
Alignment:
Q  250 gacaaccataatttacaaagaaaaagta-gtattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    |||||||||||||||||||||||||||| |||||  ||||||||||| |  |||| ||| ||||||| |||||||||||    
T  36885418 gacaaccataatttacaaagaaaaagtaggtattgacacgaaaatcaaagcaataaagagataaagt-aaaaataatgt 36885495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 325
Target Start/End: Original strand, 1633818 - 1633898
Alignment:
Q  248 ttgacaaccataatttacaaag-aaaaagtagtattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    |||||||||||| ||||||||| ||||||| ||||| ||||  ||| ||||  |||||||| ||||||| |||||||||||    
T  1633818 ttgacaaccatactttacaaagaaaaaagtggtattggcacagaaaccatagcaatagagagataaagtaaaaaataatgt 1633898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 325
Target Start/End: Complemental strand, 16966928 - 16966848
Alignment:
Q  248 ttgacaaccataatttacaaaga-aaaagtagtattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    |||||||||||| |||||||||| |||||| ||||| ||||| ||| ||||  |||||||| |||||||  ||||||||||    
T  16966928 ttgacaaccatactttacaaagaaaaaagtggtattggcacggaaaccatagcaatagagagataaagtagaaaataatgt 16966848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 325
Target Start/End: Original strand, 32843870 - 32843949
Alignment:
Q  248 ttgacaaccataatttacaaag-aaaaagtagtattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    |||||||||||| ||||||||| ||||||| ||||| ||||| ||| ||||  |||||||| ||||||| |||||||||||    
T  32843870 ttgacaaccatactttacaaagaaaaaagtggtattggcacggaaaccatagcaatagagagataaagt-aaaaataatgt 32843949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 250 - 278
Target Start/End: Original strand, 4658184 - 4658212
Alignment:
Q  250 gacaaccataatttacaaagaaaaagtag 278  Q
    |||||||||||||||||||||||||||||    
T  4658184 gacaaccataatttacaaagaaaaagtag 4658212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 249 - 325
Target Start/End: Complemental strand, 4994523 - 4994444
Alignment:
Q  249 tgacaaccataatttacaaagaaaaagtag-tattagcacgaaaatc--ataaatagagaaataaagtgaaaaataatgt 325  Q
    ||||| |||||||||| ||||||||||||| |||| ||||| ||| |  || |||||||| ||||||| |||||||||||    
T  4994523 tgacacccataatttataaagaaaaagtagatatttgcacggaaaccaaatcaatagagagataaagtaaaaaataatgt 4994444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 246 - 282
Target Start/End: Original strand, 6968159 - 6968195
Alignment:
Q  246 aattgacaaccataatttacaaagaaaaagtagtatt 282  Q
    |||| |||||||||||||||||| |||||||||||||    
T  6968159 aatttacaaccataatttacaaaaaaaaagtagtatt 6968195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 49; Significance: 5e-19; HSPs: 33)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 248 - 325
Target Start/End: Complemental strand, 41082460 - 41082381
Alignment:
Q  248 ttgacaaccataatttacaaagaaaaagtagtattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    |||||||  ||||||||||||||||||||||||||  |||||||||||||  |||||||| |||||||||||||||||||    
T  41082460 ttgacaattataatttacaaagaaaaagtagtattgacacgaaaatcatagtaatagagagataaagtgaaaaataatgt 41082381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 248 - 325
Target Start/End: Original strand, 54669512 - 54669591
Alignment:
Q  248 ttgacaaccataatttacaaagaaaaagtagtattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    |||||||||||||||||||||||||||||||||||  |||| ||| | ||  |||||||| |||||||||||||||||||    
T  54669512 ttgacaaccataatttacaaagaaaaagtagtattgacacggaaaccgtagcaatagagagataaagtgaaaaataatgt 54669591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 248 - 325
Target Start/End: Complemental strand, 31076196 - 31076117
Alignment:
Q  248 ttgacaaccataatttacaaagaaaaagtagtattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    |||||||||||||||||||||||||||||||||||  |||| ||| ||||  |||||||| ||||||| |||||| ||||    
T  31076196 ttgacaaccataatttacaaagaaaaagtagtattgacacggaaaccatagtaatagagagataaagtaaaaaatgatgt 31076117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 251 - 297
Target Start/End: Original strand, 41389804 - 41389850
Alignment:
Q  251 acaaccataatttacaaagaaaaagtagtattagcacgaaaatcata 297  Q
    |||||||||||||||||||||||||||||||| |||| |||||||||    
T  41389804 acaaccataatttacaaagaaaaagtagtattggcacaaaaatcata 41389850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 248 - 325
Target Start/End: Original strand, 9118792 - 9118872
Alignment:
Q  248 ttgacaaccataatttacaaag-aaaaagtagtattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    |||||||||||| ||||||||| ||||| | ||||| ||||||||||||||  |||||||| ||||||| |||||||||||    
T  9118792 ttgacaaccatattttacaaagaaaaaaatggtattggcacgaaaatcatagcaatagagagataaagtaaaaaataatgt 9118872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 248 - 325
Target Start/End: Complemental strand, 37066130 - 37066051
Alignment:
Q  248 ttgacaaccataatttacaaagaaaaagtagtattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    ||||||| || ||||||| |||||||||||||||| ||||| ||||||||  ||| |||| ||||||| |||||||||||    
T  37066130 ttgacaatcaaaatttactaagaaaaagtagtattggcacggaaatcatagcaatggagagataaagtaaaaaataatgt 37066051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 250 - 325
Target Start/End: Original strand, 28458307 - 28458385
Alignment:
Q  250 gacaaccataatttacaaagaaaaagta-gtattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    ||||| |||||||||||||||||||||| |||||  ||||||||||| |  |||||||| ||||||| |||||||||||    
T  28458307 gacaatcataatttacaaagaaaaagtaggtattgacacgaaaatcaaagcaatagagagataaagtaaaaaataatgt 28458385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 250 - 325
Target Start/End: Complemental strand, 32696322 - 32696244
Alignment:
Q  250 gacaaccataatttacaaagaaaaagtag-tattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||| |  |||| ||| ||||||| ||||| |||||    
T  32696322 gacaaccataatttacaaagaaaaagtagatattggcacgaaaatcaaagcaataaagagataaagtaaaaaacaatgt 32696244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 250 - 325
Target Start/End: Original strand, 46405904 - 46405982
Alignment:
Q  250 gacaaccataatttacaaagaaaaag-tagtattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    |||||||||||||||||||||||||| | ||||| |||||||||||| |  |||||||| ||||||| |||| ||||||    
T  46405904 gacaaccataatttacaaagaaaaagttggtatttgcacgaaaatcaaagcaatagagagataaagtaaaaattaatgt 46405982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 250 - 325
Target Start/End: Original strand, 49896596 - 49896674
Alignment:
Q  250 gacaaccataatttacaaagaaaaag-tagtattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    |||||||||||||||||||||||||| | |||||  ||||||||||| |  |||||||| ||||||| |||||||||||    
T  49896596 gacaaccataatttacaaagaaaaagttggtattgacacgaaaatcaaagcaatagagagataaagtaaaaaataatgt 49896674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 248 - 319
Target Start/End: Complemental strand, 17476019 - 17475946
Alignment:
Q  248 ttgacaaccataatttacaaagaaaaagtagtattagcacgaaaatcata--aatagagaaataaagtgaaaaa 319  Q
    ||||||| |||||||||||||||||||||||||||  |||| ||| ||||  |||||||| ||||||| |||||    
T  17476019 ttgacaatcataatttacaaagaaaaagtagtattgacacggaaaccatagcaatagagagataaagtaaaaaa 17475946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 248 - 325
Target Start/End: Complemental strand, 30079989 - 30079909
Alignment:
Q  248 ttgacaaccataatttacaaaga-aaaagtagtattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    ||||||||||||||||||||||| |||||| ||||| ||||| |||  |||  |||||||| ||||||| |||||||||||    
T  30079989 ttgacaaccataatttacaaagaaaaaagtggtattggcacggaaactatagcaatagagagataaagtaaaaaataatgt 30079909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 319
Target Start/End: Complemental strand, 12138993 - 12138922
Alignment:
Q  251 acaaccataatttacaaagaaaaagta-gtattagcacgaaaatcata--aatagagaaataaagtgaaaaa 319  Q
    ||||||||||||||||||||||||||| ||||| |||| ||||||| |  |||||||| ||||||| |||||    
T  12138993 acaaccataatttacaaagaaaaagtaggtatttgcacaaaaatcaaagtaatagagagataaagtaaaaaa 12138922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 325
Target Start/End: Original strand, 28657370 - 28657449
Alignment:
Q  249 tgacaaccataatttacaaagaaaaagta-gtattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    ||||||||||||||||||||||||| ||| ||||| ||||| ||| || |  |||||||| ||||||| |||||||||||    
T  28657370 tgacaaccataatttacaaagaaaacgtaggtatttgcacggaaaccaaagcaatagagagataaagtaaaaaataatgt 28657449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 250 - 325
Target Start/End: Original strand, 45143603 - 45143679
Alignment:
Q  250 gacaaccataatttacaaagaaaaag-tagtattagcacgaaaatcataaatagagaaataaagtgaaaaataatgt 325  Q
    |||||||||||||||||||||||||| | ||||| ||||||||| || ||  | ||| ||||||| |||||||||||    
T  45143603 gacaaccataatttacaaagaaaaagttggtatttgcacgaaaaccaaaataatagagataaagtaaaaaataatgt 45143679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 250 - 325
Target Start/End: Original strand, 45152372 - 45152448
Alignment:
Q  250 gacaaccataatttacaaagaaaaag-tagtattagcacgaaaatcataaatagagaaataaagtgaaaaataatgt 325  Q
    |||||||||||||||||||||||||| | ||||| ||||||||| || ||  | ||| ||||||| |||||||||||    
T  45152372 gacaaccataatttacaaagaaaaagttggtatttgcacgaaaaccaaaataatagagataaagtaaaaaataatgt 45152448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 292
Target Start/End: Complemental strand, 56271502 - 56271458
Alignment:
Q  249 tgacaaccataatttacaaagaaaaagta-gtattagcacgaaaa 292  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||    
T  56271502 tgacaaccataatttacaaagaaaaagtaggtatttgcacgaaaa 56271458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 250 - 325
Target Start/End: Complemental strand, 2999253 - 2999175
Alignment:
Q  250 gacaaccataatttacaaagaaaaag-tagtattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    |||||||||||||||||||||||||| | ||||| ||| ||||| || |  |||||||| ||||||| |||||||||||    
T  2999253 gacaaccataatttacaaagaaaaagttggtatttgcatgaaaaccaaagcaatagagagataaagtaaaaaataatgt 2999175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 248 - 323
Target Start/End: Complemental strand, 12112770 - 12112692
Alignment:
Q  248 ttgacaaccataatttacaaaga-aaaagtagtattagcacgaaaatcata--aatagagaaataaagtgaaaaataat 323  Q
    |||||||||||| |||||||||| |||||| |||||  |||| ||||||||  |||||||| ||||||| |||||||||    
T  12112770 ttgacaaccatactttacaaagaaaaaagtggtattgacacggaaatcatagcaatagagagataaagtaaaaaataat 12112692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 250 - 325
Target Start/End: Complemental strand, 13086163 - 13086085
Alignment:
Q  250 gacaaccataatttacaaagaaaaag-tagtattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    |||||||||||||||||||||||||| | ||||| |||||||||||| |  |||||||| ||||| | |||| ||||||    
T  13086163 gacaaccataatttacaaagaaaaagttggtatttgcacgaaaatcaaagcaatagagagataaaataaaaagtaatgt 13086085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 250 - 325
Target Start/End: Complemental strand, 22819790 - 22819712
Alignment:
Q  250 gacaaccataatttacaaagaaaaag-tagtattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    |||||||||||||||||||||||||| | ||||| |||||||||||| |  |||| ||| ||||||| |||| ||||||    
T  22819790 gacaaccataatttacaaagaaaaagttggtatttgcacgaaaatcaaagcaataaagagataaagtaaaaagtaatgt 22819712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 250 - 325
Target Start/End: Complemental strand, 43769852 - 43769774
Alignment:
Q  250 gacaaccataatttacaaagaaaaagt-agtattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    |||||||||||||||||||||||||||  ||||| |||||||||| | |  |||| ||| ||||||| |||||||||||    
T  43769852 gacaaccataatttacaaagaaaaagtgggtatttgcacgaaaattaaaacaataaagagataaagtaaaaaataatgt 43769774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 253 - 325
Target Start/End: Complemental strand, 51852213 - 51852139
Alignment:
Q  253 aaccataatttacaaagaaaaagtagtattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    ||||||||| ||||||||||| |||||||| |||| |||| || |  |||||||| ||||||| |||||||||||    
T  51852213 aaccataatctacaaagaaaatgtagtatttgcacaaaaaccaaaacaatagagagataaagtaaaaaataatgt 51852139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 248 - 283
Target Start/End: Original strand, 55601636 - 55601671
Alignment:
Q  248 ttgacaaccataatttacaaagaaaaagtagtatta 283  Q
    |||||||||| |||||||||||||||||||||||||    
T  55601636 ttgacaaccaaaatttacaaagaaaaagtagtatta 55601671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 325
Target Start/End: Original strand, 27326683 - 27326760
Alignment:
Q  251 acaaccataatttacaaagaaaaag-tagtattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    |||||||| |||||||||||||||| | ||||| ||||||||| || |  |||||||||||||||| |||| ||||||    
T  27326683 acaaccatcatttacaaagaaaaagttggtatttgcacgaaaaccaaagcaatagagaaataaagtaaaaagtaatgt 27326760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 248 - 318
Target Start/End: Complemental strand, 51194412 - 51194339
Alignment:
Q  248 ttgacaaccataatttacaaaga-aaaagtagtattagcacgaaaatcata--aatagagaaataaagtgaaaa 318  Q
    |||||||||||| |||||||||| |||||| ||||| ||||||||| ||||  |||||||| ||||||| ||||    
T  51194412 ttgacaaccatattttacaaagaaaaaagtggtattggcacgaaaaccataacaatagagagataaagtaaaaa 51194339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 274
Target Start/End: Original strand, 6494528 - 6494586
Alignment:
Q  220 taaagaggagtattatttgaacaatcaatt----gacaaccataatttacaaagaaaaa 274  Q
    |||||| |||| |||||||||||| |||||    |||||||||||||||||||||||||    
T  6494528 taaagaagagtgttatttgaacaaccaatttggtgacaaccataatttacaaagaaaaa 6494586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 278
Target Start/End: Original strand, 13104311 - 13104340
Alignment:
Q  249 tgacaaccataatttacaaagaaaaagtag 278  Q
    ||||||||||||||||||||||||||||||    
T  13104311 tgacaaccataatttacaaagaaaaagtag 13104340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 325
Target Start/End: Complemental strand, 14451536 - 14451456
Alignment:
Q  248 ttgacaaccataatttacaaaga-aaaagtagtattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    |||||||||||| |||||||||| |||||| |||||  |||||||| ||||  |||||||| ||||||| |||| ||||||    
T  14451536 ttgacaaccatattttacaaagaaaaaagtggtattgacacgaaaaccataacaatagagagataaagtaaaaactaatgt 14451456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 325
Target Start/End: Original strand, 41486071 - 41486151
Alignment:
Q  248 ttgacaaccataatttacaaag-aaaaagtagtattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    |||||||||||| ||||||||| ||||||| ||||| ||||| ||| ||||  |||||||| ||||||| |||| ||||||    
T  41486071 ttgacaaccatattttacaaagaaaaaagtggtattggcacggaaaccatagcaatagagagataaagtaaaaagtaatgt 41486151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 323
Target Start/End: Complemental strand, 51887804 - 51887728
Alignment:
Q  250 gacaaccataatttacaaagaaaaagta-gtattagcacgaaaatcata--aatagagaaataaagtgaaaaataat 323  Q
    |||||||||||||| |||||||| | || ||||| |||||||||||| |  |||||||| ||||||| |||||||||    
T  51887804 gacaaccataatttgcaaagaaagaatatgtatttgcacgaaaatcaaaacaatagagagataaagtaaaaaataat 51887728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 249 - 325
Target Start/End: Original strand, 1815930 - 1816008
Alignment:
Q  249 tgacaaccataatttacaaagaaaaagtag-tattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    ||||| |||||||||||||||||||||| | |||| |||| ||||||| |  |||||||| || ||||||||||||||||    
T  1815930 tgacagccataatttacaaagaaaaagtggatatttgcacaaaaatcaaaacaatagagagat-aagtgaaaaataatgt 1816008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 320
Target Start/End: Original strand, 2256262 - 2256333
Alignment:
Q  251 acaaccataatttacaaagaaaaagtagtattagcacgaaaatcata--aatagagaaataaagtgaaaaat 320  Q
    |||| ||||||||||||| |||||||||||||   ||| ||||||||  |||||||| ||||||| ||||||    
T  2256262 acaatcataatttacaaacaaaaagtagtattgaaacggaaatcatagcaatagagagataaagtaaaaaat 2256333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 1e-16; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 248 - 325
Target Start/End: Complemental strand, 37700602 - 37700523
Alignment:
Q  248 ttgacaaccataatttacaaagaaaaagtagtattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    ||||||||||||||||||||||||||||||||||| ||||| ||| ||||  |||||||| |||| || |||||||||||    
T  37700602 ttgacaaccataatttacaaagaaaaagtagtattggcacggaaaccatagcaatagagagataaggtaaaaaataatgt 37700523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 224 - 325
Target Start/End: Original strand, 18842221 - 18842329
Alignment:
Q  224 gaggagtattatttgaacaatcaatt----gacaaccataatttacaaag-aaaaagtagtattagcacgaaaatcata--aatagagaaataaagtgaa 316  Q
    ||||||| ||||||||| ||||||||    |||||||||| ||||||||| ||||||| ||||| ||||||||| ||||  |||||||| ||||||| ||    
T  18842221 gaggagtgttatttgaataatcaatttggtgacaaccatattttacaaagaaaaaagtggtattggcacgaaaaccatagcaatagagagataaagtaaa 18842320  T
Q  317 aaataatgt 325  Q
    |||||||||    
T  18842321 aaataatgt 18842329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 248 - 325
Target Start/End: Complemental strand, 2224934 - 2224853
Alignment:
Q  248 ttgacaaccataatttacaaagaaaaagtagtattagcacgaaaatcata--aatagagaaataaagt--gaaaaataatgt 325  Q
    ||||||||||||||||||||||||||||||||||| ||||| ||| ||||  |||| ||| |||||||  ||||||||||||    
T  2224934 ttgacaaccataatttacaaagaaaaagtagtattggcacggaaaacatagtaataaagagataaagtacgaaaaataatgt 2224853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 250 - 325
Target Start/End: Original strand, 38704127 - 38704205
Alignment:
Q  250 gacaaccataatttacaaagaaaaag-tagtattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    |||||||||||||||||||||||||| | ||||| |||||||||||| |  |||||| ||||||||| |||||||||||    
T  38704127 gacaaccataatttacaaagaaaaagttggtatttgcacgaaaatcaaagcaatagaaaaataaagtaaaaaataatgt 38704205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 249 - 323
Target Start/End: Original strand, 15952974 - 15953051
Alignment:
Q  249 tgacaaccataatttacaaagaaaaagt-agtattagcacgaaaatcata--aatagagaaataaagtgaaaaataat 323  Q
    ||||||||||||||||||||||||||||  ||||| |||||||||||| |  |||||||| ||||||| |||||||||    
T  15952974 tgacaaccataatttacaaagaaaaagtgggtatttgcacgaaaatcaaagcaatagagagataaagtaaaaaataat 15953051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 249 - 325
Target Start/End: Complemental strand, 9581721 - 9581642
Alignment:
Q  249 tgacaaccataatttacaaagaaaaagta-gtattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    ||||||||||||||||||||||||||||| ||||| ||||| ||| || |  |||||||| ||||||| |||||||||||    
T  9581721 tgacaaccataatttacaaagaaaaagtaggtatttgcacggaaaccaaaacaatagagagataaagtaaaaaataatgt 9581642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 249 - 325
Target Start/End: Original strand, 41175635 - 41175714
Alignment:
Q  249 tgacaaccataatttacaaagaaaaagt-agtattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    ||||||||||||||||||||||||||||  ||||| ||||||| |||| |  |||||||| ||||||| |||||||||||    
T  41175635 tgacaaccataatttacaaagaaaaagtgggtatttgcacgaagatcaaagcaatagagagataaagtaaaaaataatgt 41175714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 250 - 325
Target Start/End: Original strand, 8675363 - 8675441
Alignment:
Q  250 gacaaccataatttacaaagaaaaag-tagtattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    |||||||||||||||||||||||||| | ||||| |||||||||||| |  |||||||| ||||||| |||| ||||||    
T  8675363 gacaaccataatttacaaagaaaaagttggtatttgcacgaaaatcaaagcaatagagagataaagtaaaaagtaatgt 8675441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 250 - 325
Target Start/End: Complemental strand, 20770272 - 20770194
Alignment:
Q  250 gacaaccataatttacaaagaaaaagta-gtattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    ||||| |||||||||||||||||||||| |||||  ||||||||||| |  |||||||| ||||||| |||||||||||    
T  20770272 gacaatcataatttacaaagaaaaagtaggtattgacacgaaaatcaaagcaatagagagataaagtaaaaaataatgt 20770194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 248 - 325
Target Start/End: Complemental strand, 5042391 - 5042311
Alignment:
Q  248 ttgacaaccataatttacaaaga-aaaagtagtattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    |||||||||||| |||||||||| |||||| ||||| ||||| ||| ||||  |||||||| ||||||| |||||||||||    
T  5042391 ttgacaaccatattttacaaagaaaaaagtggtattggcacggaaaccatagtaatagagagataaagtaaaaaataatgt 5042311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 248 - 318
Target Start/End: Complemental strand, 42267488 - 42267416
Alignment:
Q  248 ttgacaaccataatttacaaagaaaaagtagtattagcacgaaaatcata--aatagagaaataaagtgaaaa 318  Q
    ||||||||||||||||| ||||||||| |||||||  |||| ||||||||  |||||||| ||||||| ||||    
T  42267488 ttgacaaccataatttataaagaaaaaatagtattgacacggaaatcataacaatagagagataaagtaaaaa 42267416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 325
Target Start/End: Complemental strand, 10649577 - 10649498
Alignment:
Q  249 tgacaaccataatttacaaagaaaaag-tagtattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    ||||||||||||||||||||||||||| | ||||  |||||||||||| |  |||||||| ||||||| |||| ||||||    
T  10649577 tgacaaccataatttacaaagaaaaagttggtatgtgcacgaaaatcaaagcaatagagagataaagtaaaaagtaatgt 10649498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 250 - 325
Target Start/End: Original strand, 1839275 - 1839353
Alignment:
Q  250 gacaaccataatttacaaagaaaaagtag-tattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    ||||||||||||||||||||||||| ||| |||| ||||||||| || |  |||||| | ||||||| |||||||||||    
T  1839275 gacaaccataatttacaaagaaaaaatagatatttgcacgaaaaccaaaacaatagaaagataaagtaaaaaataatgt 1839353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 250 - 325
Target Start/End: Original strand, 19839916 - 19839994
Alignment:
Q  250 gacaaccataatttacaaagaaaaagtag-tattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    ||||||||||||||||||||||||| | | |||| ||||||||| || |  |||||||| ||||||| |||||||||||    
T  19839916 gacaaccataatttacaaagaaaaaattgatatttgcacgaaaaccaaagcaatagagatataaagtaaaaaataatgt 19839994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 250 - 325
Target Start/End: Complemental strand, 34124762 - 34124684
Alignment:
Q  250 gacaaccataatttacaaagaaaaag-tagtattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    |||||||||||||||||||||||||| | |||||  |||||||| || |  |||||||||||||||| |||| ||||||    
T  34124762 gacaaccataatttacaaagaaaaagttggtatttacacgaaaaccaaagcaatagagaaataaagtaaaaagtaatgt 34124684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 325
Target Start/End: Complemental strand, 15478798 - 15478721
Alignment:
Q  251 acaaccataatttacaaagaaaaagtag-tattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    |||||||||||||||||||||||||| | |||| ||||||||| || |  ||| |||| ||||||| |||||||||||    
T  15478798 acaaccataatttacaaagaaaaagttgatatttgcacgaaaaccaaaacaattgagagataaagtaaaaaataatgt 15478721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 325
Target Start/End: Original strand, 2688914 - 2688994
Alignment:
Q  248 ttgacaaccataatttacaaagaaaaa-gtagtattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    |||||||| ||| |||||||||||||| || ||||| ||||| ||| ||||  |||||||| ||||||| |||||||||||    
T  2688914 ttgacaactatattttacaaagaaaaaagttgtattggcacggaaaccatagcaatagagagataaagtaaaaaataatgt 2688994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 249 - 325
Target Start/End: Original strand, 3640126 - 3640205
Alignment:
Q  249 tgacaaccataatttacaaagaaaaagt-agtattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    |||||||||||||||| |||||||||||  ||||| ||| |||||||| |  |||||| | ||||||| |||||||||||    
T  3640126 tgacaaccataatttataaagaaaaagtgggtatttgcatgaaaatcaaagcaatagaaagataaagtaaaaaataatgt 3640205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 257 - 325
Target Start/End: Complemental strand, 9226434 - 9226364
Alignment:
Q  257 ataatttacaaagaaaaagt-agtattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    |||||||||||||||||||| |||||| ||||| |||||| |  |||||||| ||||||| |||||||||||    
T  9226434 ataatttacaaagaaaaagtaagtatttgcacggaaatcaaaacaatagagagataaagt-aaaaataatgt 9226364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 318
Target Start/End: Complemental strand, 10865479 - 10865388
Alignment:
Q  232 ttatttgaacaa-tcaattgacaaccata-atttacaaagaaaaagt-agtattagcacgaaaatcata--aatagagaaataaagtgaaaa 318  Q
    |||||||||||| | | |||||||||||| ||||||||||||||||| ||||||  ||||||||||| |  |||||||| ||||| ||||||    
T  10865479 ttatttgaacaacttatttgacaaccatagatttacaaagaaaaagtaagtattgacacgaaaatcaaagtaatagagagataaaatgaaaa 10865388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 248 - 318
Target Start/End: Original strand, 26041248 - 26041320
Alignment:
Q  248 ttgacaaccataatttacaaagaaaaagtagtattagcacgaaaatcat--aaatagagaaataaagtgaaaa 318  Q
    |||||||||||||||||||||||||||||||||||  |||| |||||||  ||||||||| ||||||| ||||    
T  26041248 ttgacaaccataatttacaaagaaaaagtagtattgacacggaaatcatagaaatagagagataaagtaaaaa 26041320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 248 - 325
Target Start/End: Complemental strand, 39823951 - 39823872
Alignment:
Q  248 ttgacaaccataatttacaaagaaaaagtagtattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    |||||||||||||||||||||||||||||||||||  |||| |||| |||  |||||| | ||||||| |||||||||||    
T  39823951 ttgacaaccataatttacaaagaaaaagtagtattgacacggaaattataacaatagaaagataaagtaaaaaataatgt 39823872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 248 - 325
Target Start/End: Original strand, 44495026 - 44495105
Alignment:
Q  248 ttgacaaccataatttacaaagaaaaagtagtattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    ||||||||||||||||| ||||||||| ||||||| |||   ||| ||||  ||||||||||||||||||||||||||||    
T  44495026 ttgacaaccataatttataaagaaaaattagtattggcattgaaaccatagcaatagagaaataaagtgaaaaataatgt 44495105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 248 - 325
Target Start/End: Original strand, 47078180 - 47078259
Alignment:
Q  248 ttgacaaccataatttacaaagaaaaagtagtattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    |||||||||| ||||||||||||||||||| |||| ||||| ||| ||||  |||||||| ||||||| |||||||||||    
T  47078180 ttgacaaccaaaatttacaaagaaaaagtaatattggcacggaaaccatagcaatagagagataaagtaaaaaataatgt 47078259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 222 - 325
Target Start/End: Complemental strand, 39332158 - 39332048
Alignment:
Q  222 aagaggagtattatttgaacaatcaatt----gacaaccataatttacaaaga-aaaagtagtattagcacgaaaatcata--aatagagaaataaagtg 314  Q
    ||||||||| |||||||||||| |||||    |||||||||| |||||||||| |||||| ||||| ||||| ||||||||  |||||||| |||||||     
T  39332158 aagaggagtgttatttgaacaaccaatttgatgacaaccatattttacaaagaaaaaagtggtattggcacggaaatcatagcaatagagagataaagta 39332059  T
Q  315 aaaaataatgt 325  Q
    |||| ||||||    
T  39332058 aaaagtaatgt 39332048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 249 - 325
Target Start/End: Complemental strand, 7817778 - 7817700
Alignment:
Q  249 tgacaaccataatttacaaagaaaaagtag-tattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    |||||||||||||||||||||||||||| | |||| |||||||||||| |  |||||||| ||||||| |||||||||||    
T  7817778 tgacaaccataatttacaaagaaaaagtggatatttgcacgaaaatcaaagcaatagagagataaagt-aaaaataatgt 7817700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 253 - 325
Target Start/End: Original strand, 12645843 - 12645918
Alignment:
Q  253 aaccataatttacaaagaaaaagtag-tattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    |||||||||||||||||||||||| | |||| |||||||||||| |  |||||||| ||||||| |||||||||||    
T  12645843 aaccataatttacaaagaaaaagttgatatttgcacgaaaatcaaagcaatagagagataaagtaaaaaataatgt 12645918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 249 - 325
Target Start/End: Complemental strand, 41458738 - 41458659
Alignment:
Q  249 tgacaaccataatttacaaagaaaaagta-gtattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    |||||||||||||||| |||||||||||| ||||| |||| ||||||| |  |||| ||||||||||| |||||||||||    
T  41458738 tgacaaccataatttataaagaaaaagtaggtatttgcacaaaaatcaaaacaatatagaaataaagtaaaaaataatgt 41458659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 250 - 325
Target Start/End: Complemental strand, 28036885 - 28036807
Alignment:
Q  250 gacaaccataatttacaaagaaaaag-tagtattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    |||||||||||||||||||||||||| | ||||| ||||||||| || |  |||||||| ||||||| |||||||||||    
T  28036885 gacaaccataatttacaaagaaaaagttggtatttgcacgaaaaccaaagcaatagagagataaagtaaaaaataatgt 28036807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 248 - 298
Target Start/End: Complemental strand, 46148134 - 46148084
Alignment:
Q  248 ttgacaaccataatttacaaagaaaaagtagtattagcacgaaaatcataa 298  Q
    ||||||||||||||||| ||||||||| ||||||| ||||| |||||||||    
T  46148134 ttgacaaccataatttataaagaaaaaatagtattggcacggaaatcataa 46148084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 248 - 325
Target Start/End: Original strand, 21023045 - 21023125
Alignment:
Q  248 ttgacaaccataatttacaaag-aaaaagtagtattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    |||||||||||| ||||||||| ||||||| |||||| |||| ||| ||||  |||||||| ||||||| |||||||||||    
T  21023045 ttgacaaccatattttacaaagaaaaaagtggtattatcacggaaaccataacaatagagagataaagtaaaaaataatgt 21023125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 251 - 292
Target Start/End: Original strand, 23048331 - 23048372
Alignment:
Q  251 acaaccataatttacaaagaaaaagtagtattagcacgaaaa 292  Q
    |||||||||||||||||||||||||||||||| ||| |||||    
T  23048331 acaaccataatttacaaagaaaaagtagtatttgcatgaaaa 23048372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 248 - 325
Target Start/End: Original strand, 37808692 - 37808772
Alignment:
Q  248 ttgacaaccataatttacaaag-aaaaagtagtattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    |||||||||||| ||||||||| ||||||| ||||| ||||| ||| ||||  |||||||| ||||||| |||||||||||    
T  37808692 ttgacaaccatattttacaaagaaaaaagtggtattggcacggaaagcataacaatagagagataaagtaaaaaataatgt 37808772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 248 - 325
Target Start/End: Original strand, 39231656 - 39231736
Alignment:
Q  248 ttgacaaccataatttacaaagaaaaa-gtagtattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    |||||||||||| |||||||||||||| || ||||| ||||| ||| ||||  |||||||| ||||||| |||||||||||    
T  39231656 ttgacaaccatactttacaaagaaaaaggtggtattggcacggaaaccatagcaatagagagataaagtaaaaaataatgt 39231736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 257 - 325
Target Start/End: Original strand, 35588828 - 35588899
Alignment:
Q  257 ataatttacaaagaaaaag-tagtattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    ||||||||||||||||||| | ||||| |||||||||||| |  |||||||| ||||||| |||||||||||    
T  35588828 ataatttacaaagaaaaagttggtatttgcacgaaaatcaaagcaatagagagataaagtaaaaaataatgt 35588899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 325
Target Start/End: Complemental strand, 43482665 - 43482587
Alignment:
Q  249 tgacaaccataatttacaaagaaaaagta-gtattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    ||||||||||||||| ||||||||||||| ||||| ||||||||| || |  |||||||| ||||||| |||||||||||    
T  43482665 tgacaaccataattttcaaagaaaaagtaggtatttgcacgaaaaccaaaacaatagagagataaagt-aaaaataatgt 43482587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 250 - 325
Target Start/End: Complemental strand, 11565033 - 11564956
Alignment:
Q  250 gacaaccataatttacaaagaaaaagtag-tattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    |||||||||||||| |||||||||| ||| |||| |||||||||||| |  |||||||| ||||||| |||||||||||    
T  11565033 gacaaccataatttgcaaagaaaaaataggtatt-gcacgaaaatcaaagcaatagagagataaagtaaaaaataatgt 11564956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 325
Target Start/End: Original strand, 44184490 - 44184567
Alignment:
Q  251 acaaccataatttacaaagaaaaagta-gtattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    |||||||||||||||||||||||| || ||||| ||||||||| || |  |||||||| ||||||| |||| ||||||    
T  44184490 acaaccataatttacaaagaaaaaataggtatttgcacgaaaaccaaagcaatagagagataaagtaaaaagtaatgt 44184567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 325
Target Start/End: Complemental strand, 3293272 - 3293192
Alignment:
Q  248 ttgacaaccataatttacaaagaaaaagta-gtattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    |||||||| |||||||| |||||||||||| ||||| ||| |||||||| |  |||||||| ||||||| |||||| ||||    
T  3293272 ttgacaactataatttataaagaaaaagtaggtatttgcatgaaaatcaaagcaatagagagataaagtaaaaaattatgt 3293192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 325
Target Start/End: Original strand, 19786007 - 19786087
Alignment:
Q  248 ttgacaaccataatttacaaag-aaaaagtagtattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    |||||||||||| ||||||||| ||||||| ||||| ||||||||| || |  |||||||| ||||||| |||| ||||||    
T  19786007 ttgacaaccatattttacaaagaaaaaagtggtattggcacgaaaaccagagcaatagagagataaagtaaaaagtaatgt 19786087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 325
Target Start/End: Complemental strand, 32815311 - 32815231
Alignment:
Q  248 ttgacaaccataatttacaaaga-aaaagtagtattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    |||||||||||| |||||||||| |||||| ||||| ||||  ||| ||||  |||||||| ||||||| |||||||||||    
T  32815311 ttgacaaccatattttacaaagaaaaaagtggtattggcacagaaaccatagcaatagagagataaagtaaaaaataatgt 32815231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 325
Target Start/End: Original strand, 38779672 - 38779752
Alignment:
Q  248 ttgacaaccataatttacaaag-aaaaagtagtattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    |||||||||||| ||||||||| ||||||| ||||| ||||| ||| ||||  |||||||| || |||| |||||||||||    
T  38779672 ttgacaaccatactttacaaagaaaaaagtggtattggcacggaaaccatagcaatagagagatgaagtaaaaaataatgt 38779752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 249 - 325
Target Start/End: Complemental strand, 3062472 - 3062393
Alignment:
Q  249 tgacaaccataatttacaaagaaaaagta-gtattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    |||||||||||||||||||||||||| || ||||| |||| |||| || |  |||||||| ||||||| |||| ||||||    
T  3062472 tgacaaccataatttacaaagaaaaaataggtatttgcacaaaaaccaaaacaatagagagataaagtaaaaagtaatgt 3062393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 249 - 325
Target Start/End: Original strand, 35452502 - 35452581
Alignment:
Q  249 tgacaaccataatttacaaagaaaaagta-gtattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    |||||||||||||||| |||||||||| | ||||| ||||| |||||| |  |||||||| ||||||| |||||| ||||    
T  35452502 tgacaaccataatttataaagaaaaagaaggtatttgcacggaaatcaaagcaatagagagataaagtaaaaaattatgt 35452581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 249 - 277
Target Start/End: Complemental strand, 42926281 - 42926253
Alignment:
Q  249 tgacaaccataatttacaaagaaaaagta 277  Q
    |||||||||||||||||||||||||||||    
T  42926281 tgacaaccataatttacaaagaaaaagta 42926253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 249 - 325
Target Start/End: Complemental strand, 46532644 - 46532565
Alignment:
Q  249 tgacaaccataatttacaaagaaaaagta-gtattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    |||||||||||||||| ||||||||| || |||||  |||||||| || |  |||||||| ||||||| |||||||||||    
T  46532644 tgacaaccataatttataaagaaaaattaggtatttacacgaaaaccaaaacaatagagagataaagtaaaaaataatgt 46532565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 248 - 297
Target Start/End: Original strand, 5200154 - 5200203
Alignment:
Q  248 ttgacaaccataatttacaaagaaaaagtagtattagcacgaaaatcata 297  Q
    ||||||||||||||||||||||||||||||||||| ||||| ||||||||    
T  5200154 ttgacaaccataatttacaaagaaaaagtagtattggcacggaaatcata 5200203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 249 - 325
Target Start/End: Original strand, 40936993 - 40937072
Alignment:
Q  249 tgacaaccataatttacaaagaaaaagt-agtattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    ||||||||||||||||||||||||||||  ||||| |||||||||||| |  |||||||| ||||||| |||||||||||    
T  40936993 tgacaaccataatttacaaagaaaaagtgggtatttgcacgaaaatcaaagcaatagagagataaagtaaaaaataatgt 40937072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 251 - 325
Target Start/End: Complemental strand, 35705633 - 35705557
Alignment:
Q  251 acaaccataatttacaaagaaaaagtagtattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    ||||||||||||||||||||||||||||||||  |||||||| ||||  |||| ||| ||||||| ||| |||||||    
T  35705633 acaaccataatttacaaagaaaaagtagtattgacacgaaaaccatagcaataaagagataaagtaaaatataatgt 35705557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 253 - 325
Target Start/End: Complemental strand, 2221131 - 2221056
Alignment:
Q  253 aaccataatttacaaagaaaaagtag-tattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    |||||||||||| ||||||||||||| |||| ||||| |||||| |  |||||||| |||||||||||||||||||    
T  2221131 aaccataatttataaagaaaaagtaggtatttgcacggaaatcaaagcaatagagagataaagtgaaaaataatgt 2221056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 253 - 325
Target Start/End: Complemental strand, 15269999 - 15269924
Alignment:
Q  253 aaccataatttacaaagaaaaagta-gtattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    ||||||||||||||||||||||||| ||||| |||||||||||| |  |||||||| ||||||| |||| ||||||    
T  15269999 aaccataatttacaaagaaaaagtaggtatttgcacgaaaatcaaagcaatagagagataaagtaaaaagtaatgt 15269924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 248 - 311
Target Start/End: Complemental strand, 4753303 - 4753238
Alignment:
Q  248 ttgacaaccataatttacaaagaaaaagtagtattagcacgaaaatcata--aatagagaaataaa 311  Q
    ||||||||||||||||| |||||||||||||||||  |||| ||||||||  |||||||| |||||    
T  4753303 ttgacaaccataatttataaagaaaaagtagtattgacacggaaatcatagcaatagagagataaa 4753238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 249 - 318
Target Start/End: Complemental strand, 6896036 - 6895964
Alignment:
Q  249 tgacaaccataatttacaaagaaaaagt-agtattagcacgaaaatcata--aatagagaaataaagtgaaaa 318  Q
    |||||||||||||||||||||||||||| |||||| ||||  |||||| |  |||||||||||||||| ||||    
T  6896036 tgacaaccataatttacaaagaaaaagtaagtatttgcacagaaatcaaaacaatagagaaataaagtaaaaa 6895964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 248 - 318
Target Start/End: Complemental strand, 28679459 - 28679387
Alignment:
Q  248 ttgacaaccataatttacaaagaaaaagtagtattagcacgaaaatcata--aatagagaaataaagtgaaaa 318  Q
    ||||||||||||||||| |||||||||||||||||  || | ||||||||  |||||||| ||||||| ||||    
T  28679459 ttgacaaccataatttataaagaaaaagtagtattgacatggaaatcatagcaatagagagataaagtaaaaa 28679387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 248 - 325
Target Start/End: Complemental strand, 31389690 - 31389610
Alignment:
Q  248 ttgacaaccataatttacaaaga-aaaagtagtattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    ||||||||||||| ||||||||| ||||||||||||  |||| ||| ||||  ||||| |||||||||| |||||||||||    
T  31389690 ttgacaaccataacttacaaagaaaaaagtagtattgtcacggaaaccataacaatagggaaataaagttaaaaataatgt 31389610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 256 - 325
Target Start/End: Original strand, 34119588 - 34119660
Alignment:
Q  256 cataatttacaaagaaaaagt-agtattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    ||||||||||||||||||||| ||||||  ||||||||||| |  |||||||| ||||||| |||||||||||    
T  34119588 cataatttacaaagaaaaagtaagtattcacacgaaaatcaaaacaatagagagataaagtaaaaaataatgt 34119660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 313
Target Start/End: Complemental strand, 5054750 - 5054683
Alignment:
Q  249 tgacaaccataatttacaaagaaaaagta-gtattagcacgaaaatcata--aatagagaaataaagt 313  Q
    ||||||| ||||||||||||||||||||| ||||| |||||||||||| |  |||||||| |||||||    
T  5054750 tgacaacaataatttacaaagaaaaagtaggtatttgcacgaaaatcaaagcaatagagagataaagt 5054683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 250 - 325
Target Start/End: Original strand, 22525926 - 22526002
Alignment:
Q  250 gacaaccataatttacaaagaaaaagta-gtattagcacgaaaatcataaatagagaaataaagtgaaaaataatgt 325  Q
    |||||||||||||||||||||||||||| | ||| |||||||||||| |   | ||| ||||||| |||||||||||    
T  22525926 gacaaccataatttacaaagaaaaagtaggcatttgcacgaaaatcaaagcaatagagataaagtaaaaaataatgt 22526002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 250 - 325
Target Start/End: Original strand, 23352837 - 23352913
Alignment:
Q  250 gacaaccataatttacaaagaaaaagta-gtattagcacgaaaatcataaatagagaaataaagtgaaaaataatgt 325  Q
    |||||||||||||||||||||||||||| ||||| ||||||||| || |   | ||| ||||||| |||||||||||    
T  23352837 gacaaccataatttacaaagaaaaagtatgtatttgcacgaaaaccaaagcaatagagataaagtaaaaaataatgt 23352913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 325
Target Start/End: Complemental strand, 42866892 - 42866813
Alignment:
Q  249 tgacaaccataatttacaaagaaaaagtag-tattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    |||||| ||||||||||||||||||||| | |||| ||||||| |||| |  |||||||| ||||||| |||||||||||    
T  42866892 tgacaatcataatttacaaagaaaaagtggatatttgcacgaagatcaaagcaatagagagataaagtaaaaaataatgt 42866813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 250 - 325
Target Start/End: Original strand, 35589317 - 35589395
Alignment:
Q  250 gacaaccataatttacaaagaaaaagtag-tattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    ||||||||||||||||||||||||||| | |||| ||||||||| || |  |||||||| ||||||| |||| ||||||    
T  35589317 gacaaccataatttacaaagaaaaagttgatatttgcacgaaaaccaaaacaatagagagataaagtaaaaagtaatgt 35589395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 325
Target Start/End: Complemental strand, 433993 - 433913
Alignment:
Q  248 ttgacaaccataatttacaaaga-aaaagtagtattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    |||||||||||| |||||||||| |||||| |||||  |||| ||||||||  |||||||| ||||||| |||||| ||||    
T  433993 ttgacaaccatactttacaaagaaaaaagtggtattgacacggaaatcatagcaatagagagataaagtaaaaaatgatgt 433913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 325
Target Start/End: Complemental strand, 9377591 - 9377519
Alignment:
Q  256 cataatttacaaagaaaaagtag-tattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    ||||||||||||||||||||||| |||| ||||||||| || |  |||||||| ||||||| |||| ||||||    
T  9377591 cataatttacaaagaaaaagtagatatttgcacgaaaaccaaagcaatagagagataaagtaaaaagtaatgt 9377519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 325
Target Start/End: Complemental strand, 28245867 - 28245791
Alignment:
Q  251 acaaccataatttacaaagaaaaagtagtattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    |||||| |||||||||||||||||   ||||| ||||||||| || |  |||||||| ||||||| |||||||||||    
T  28245867 acaaccttaatttacaaagaaaaataggtatttgcacgaaaaccaaagcaatagagagataaagtaaaaaataatgt 28245791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 278
Target Start/End: Complemental strand, 29712120 - 29712091
Alignment:
Q  249 tgacaaccataatttacaaagaaaaagtag 278  Q
    ||||||||||||||||||||||||||||||    
T  29712120 tgacaaccataatttacaaagaaaaagtag 29712091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 325
Target Start/End: Complemental strand, 29879985 - 29879905
Alignment:
Q  248 ttgacaaccataatttacaaag-aaaaagtagtattagcacgaaaatcataa--atagagaaataaagtgaaaaataatgt 325  Q
    ||||||||||||| ||| |||| |||||||||||||  |||| ||| |||||  ||||||| ||||||| |||||||||||    
T  29879985 ttgacaaccataacttataaaggaaaaagtagtattgacacgtaaaccataacaatagagagataaagttaaaaataatgt 29879905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 325
Target Start/End: Complemental strand, 42678892 - 42678812
Alignment:
Q  249 tgacaaccataatttacaaagaaaaa-gtag-tattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    |||||||||||||||||||||||||| |||| |||| ||||| ||| || |  |||||||| ||||||| |||||||||||    
T  42678892 tgacaaccataatttacaaagaaaaaagtaggtatttgcacggaaaccaaagcaatagagagataaagtaaaaaataatgt 42678812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 325
Target Start/End: Original strand, 26738809 - 26738888
Alignment:
Q  248 ttgacaaccataatttacaaagaaaaagtagtattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    ||||||| |||| ||||||||||||||||| |||| ||||  ||| ||||  |||||||| ||||| | |||||||||||    
T  26738809 ttgacaatcatattttacaaagaaaaagtaatattggcacagaaaccatagcaatagagagataaaataaaaaataatgt 26738888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 249 - 325
Target Start/End: Original strand, 36211989 - 36212067
Alignment:
Q  249 tgacaaccataatttacaaagaaaaagt-agtattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    |||||| ||||||||| ||||||||||| | |||| |||||||||||| |  |||||||| ||||||| |||||||||||    
T  36211989 tgacaatcataatttataaagaaaaagtaaatatttgcacgaaaatcaaagtaatagagagataaagt-aaaaataatgt 36212067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 248 - 325
Target Start/End: Complemental strand, 13658974 - 13658895
Alignment:
Q  248 ttgacaaccataatttacaaagaaaaagtagtattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    |||||||||||||||||||||||||||||||||||  |||| ||| ||||  |||||||| || |||| |||||||||||    
T  13658974 ttgacaaccataatttacaaagaaaaagtagtattgacacggaaaccatatcaatagagagatcaagtaaaaaataatgt 13658895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 250 - 325
Target Start/End: Original strand, 6531110 - 6531191
Alignment:
Q  250 gacaaccataatttacaaagaaaaagta-gtattagcacgaaaatcata-----aatagagaaataaagtgaaaaataatgt 325  Q
    |||||||||||||||||||||||||||| ||||| |||||||||||| |     |||||||| ||||||| |||||||||||    
T  6531110 gacaaccataatttacaaagaaaaagtatgtatttgcacgaaaatcaaagcaataatagagagataaagtaaaaaataatgt 6531191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 250 - 325
Target Start/End: Complemental strand, 1369501 - 1369423
Alignment:
Q  250 gacaaccataatttacaaagaaaaag-tagtattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    |||||||||||||||||||||||||| | ||||| |||||||||||| |  |||||||| ||||||| |||| ||||||    
T  1369501 gacaaccataatttacaaagaaaaagttggtatttgcacgaaaatcaaagcaatagagagataaagtaaaaagtaatgt 1369423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 250 - 325
Target Start/End: Original strand, 13143312 - 13143390
Alignment:
Q  250 gacaaccataatttacaaagaaaaag-tagtattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    |||||||||||||||||||||||||| | ||||| |||||||||||| |  |||||||| ||||||| |||| ||||||    
T  13143312 gacaaccataatttacaaagaaaaagtttgtatttgcacgaaaatcaaagcaatagagagataaagtaaaaagtaatgt 13143390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 248 - 325
Target Start/End: Original strand, 2075379 - 2075459
Alignment:
Q  248 ttgacaaccataatttacaaag-aaaaagtagtattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    |||||||||||||||||||||| ||||||| ||||| ||||| |||  |||  |||||||| ||||||| |||||||||||    
T  2075379 ttgacaaccataatttacaaagaaaaaagtggtattggcacggaaactataacaatagagagataaagtaaaaaataatgt 2075459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 325
Target Start/End: Complemental strand, 3199102 - 3199023
Alignment:
Q  248 ttgacaaccataatttacaaagaaaaagtagtattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    ||||||| ||||||||| |||||||||||||||||  |||| ||| ||||  |||| ||| ||||| |||||||||||||    
T  3199102 ttgacaatcataatttataaagaaaaagtagtattgacacggaaaccatagcaatatagagataaaatgaaaaataatgt 3199023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 325
Target Start/End: Original strand, 14699593 - 14699672
Alignment:
Q  249 tgacaaccataatttacaaagaaaaagta-gtattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    ||||||| ||||||||||||||||||||| ||||| ||||||||| || |  || ||||| ||||||| |||||||||||    
T  14699593 tgacaacaataatttacaaagaaaaagtaggtatttgcacgaaaaccaaagcaacagagagataaagtaaaaaataatgt 14699672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 325
Target Start/End: Original strand, 754369 - 754446
Alignment:
Q  251 acaaccataatttacaaagaaaaag-tagtattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    ||||||||||||||||||||||||| | ||||| ||||||||| || |  |||||||| ||||||| |||| ||||||    
T  754369 acaaccataatttacaaagaaaaagttggtatttgcacgaaaaccaaagcaatagagagataaagtaaaaagtaatgt 754446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 321
Target Start/End: Complemental strand, 2943574 - 2943501
Alignment:
Q  251 acaaccataatttacaaagaaaaagtag-tattagcacgaaaatcataa--atagagaaataaagtgaaaaata 321  Q
    ||||||||| |||| ||||||||||||| |||| ||||||||| || ||  ||||||||||||||| |||||||    
T  2943574 acaaccatattttataaagaaaaagtagatatttgcacgaaaaccaaaataatagagaaataaagtaaaaaata 2943501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 325
Target Start/End: Complemental strand, 4820393 - 4820314
Alignment:
Q  251 acaaccataatttacaaagaaaaa-gtagtattagcacgaaaatcata----aatagagaaataaagtgaaaaataatgt 325  Q
    ||||||||| |||||||||||||| || ||||| ||||||||| ||||    |||||||| ||||||| |||||||||||    
T  4820393 acaaccatattttacaaagaaaaaagtggtattggcacgaaaaccatataacaatagagagataaagtaaaaaataatgt 4820314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 325
Target Start/End: Original strand, 11547457 - 11547537
Alignment:
Q  248 ttgacaaccataatttacaaag-aaaaagtagtattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    |||||| ||||||||||||||| ||||||| |||||  |||| ||| ||||  |||||||| ||||||| |||||||||||    
T  11547457 ttgacagccataatttacaaagaaaaaagtggtattgacacggaaaccatagcaatagagagataaagtaaaaaataatgt 11547537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 281
Target Start/End: Original strand, 22341103 - 22341136
Alignment:
Q  248 ttgacaaccataatttacaaagaaaaagtagtat 281  Q
    |||||||| |||||||||||||||||||||||||    
T  22341103 ttgacaacaataatttacaaagaaaaagtagtat 22341136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 253 - 326
Target Start/End: Original strand, 28944912 - 28944988
Alignment:
Q  253 aaccataatttacaaagaaaaagtag-tattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgtt 326  Q
    |||||||||||  ||||||||| ||| |||| | |||||||||| |  |||||||||||||||| ||||||||||||    
T  28944912 aaccataatttgtaaagaaaaaataggtatttgtacgaaaatcaaagcaatagagaaataaagtaaaaaataatgtt 28944988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 319
Target Start/End: Original strand, 32459446 - 32459518
Alignment:
Q  250 gacaaccataatttacaaagaaaaag-tagtattagcacgaaaatcata--aatagagaaataaagtgaaaaa 319  Q
    |||||||||||||||||||||||||| | ||||| ||||||||| || |  |||||||| ||||||| |||||    
T  32459446 gacaaccataatttacaaagaaaaagttggtatttgcacgaaaaccaaagcaatagagagataaagtaaaaaa 32459518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 323
Target Start/End: Complemental strand, 335204 - 335128
Alignment:
Q  248 ttgacaaccataatttacaaaga-aaaagtagtattagcacgaaaatcataaatagagaaataaagtgaaaaataat 323  Q
    ||||||| ||||||||||||||| |||||||||||| ||||| ||| ||||   | ||| ||||||| |||||||||    
T  335204 ttgacaatcataatttacaaagaaaaaagtagtattggcacggaaaccatagcaatagagataaagttaaaaataat 335128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 249 - 325
Target Start/End: Original strand, 18141230 - 18141309
Alignment:
Q  249 tgacaaccataatttacaaagaaaaag-tagtattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    ||||||||||||||||||||||| ||| | ||||  |||||||||||| |  |||||||| ||||||| |||| ||||||    
T  18141230 tgacaaccataatttacaaagaataagttggtatgtgcacgaaaatcaaagcaatagagagataaagtaaaaagtaatgt 18141309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 249 - 325
Target Start/End: Complemental strand, 26832788 - 26832709
Alignment:
Q  249 tgacaaccataatttacaaagaaaaagta-gtattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    ||||||||||||||||| |||||||| || ||||| ||||||||| || |  |||||||| ||||||| |||||| ||||    
T  26832788 tgacaaccataatttacgaagaaaaactatgtatttgcacgaaaaccaaaacaatagagagataaagtaaaaaatgatgt 26832709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 247 - 325
Target Start/End: Complemental strand, 122974 - 122894
Alignment:
Q  247 attgacaaccataatttacaaagaaaaagtagtattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    ||||||||||||| |||||||| ||||| | ||||| ||||| ||| ||||  |||||||||||||||| |||||||||||    
T  122974 attgacaaccatattttacaaaaaaaaattggtattggcacggaaaccatagcaatagagaaataaagtaaaaaataatgt 122894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0532 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0532
Description:

Target: scaffold0532; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 249 - 325
Target Start/End: Complemental strand, 11106 - 11027
Alignment:
Q  249 tgacaaccataatttacaaagaaaaagt-agtattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    |||||| |||||||||||||||||||||  ||||| |||||||||||| |  |||||||| ||||||| |||||||||||    
T  11106 tgacaatcataatttacaaagaaaaagtgggtatttgcacgaaaatcaaaacaatagagagataaagtaaaaaataatgt 11027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 248 - 325
Target Start/End: Complemental strand, 150 - 70
Alignment:
Q  248 ttgacaaccataatttacaaaga-aaaagtagtattagcacgaaaatcata--aatagagaaataaagtgaaaaataatgt 325  Q
    |||||||||||| |||||||||| |||||| ||||| ||||||||| ||||  |||||||| ||||||| |||| ||||||    
T  150 ttgacaaccatattttacaaagaaaaaagtggtattggcacgaaaaccataacaatagagagataaagtaaaaagtaatgt 70  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University