View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15962_low_77 (Length: 326)
Name: NF15962_low_77
Description: NF15962
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15962_low_77 |
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Alignment Details
Target: chr8 (Bit Score: 284; Significance: 1e-159; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 284; E-Value: 1e-159
Query Start/End: Original strand, 23 - 310
Target Start/End: Complemental strand, 45199124 - 45198837
Alignment:
| Q |
23 |
aaggtgagtgaatcagatagctcctccactctttctcctgatggaggactgccaggactctgctgcctattagaagaaactgaatgcaaccaatttgaaa |
122 |
Q |
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| T |
45199124 |
aaggtgagtgaatcagatagctcctccactctttctcctgatggaggactgccaggactctgcttcctattagaagaaactgaatgcaaccaatttgaaa |
45199025 |
T |
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| Q |
123 |
gcttgtttctggtagtaggagatgaagatgaaccatcattggacttgttactcctttcagcttgtgcatcttctgattgattattagacattatatgaag |
222 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45199024 |
gcttgtttctggtagtaggagatgaagatgaaccatcattggacttgttactcctttcagcttgtgcatcttctgattgattattagacattatatgaag |
45198925 |
T |
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| Q |
223 |
cttcttaagaatgttcttcataacttttcaccttattattacagtactgaatgttaaagaagtgtaaacctctccatagtgtagttag |
310 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45198924 |
cttcttaagaatgttcttcataacttttcaccttattattacagtactgaatgttaaagaagtgtaaacctctccatagtgtagttag |
45198837 |
T |
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