View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15962_low_93 (Length: 295)
Name: NF15962_low_93
Description: NF15962
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15962_low_93 |
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Alignment Details
Target: chr3 (Bit Score: 261; Significance: 1e-145; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 1 - 277
Target Start/End: Original strand, 36223641 - 36223917
Alignment:
| Q |
1 |
cacttcttggtaccctttaagaagaatttcctgcctcttataatatttagcaagtttcctttgtctctctgaaggattgaaatgcaaaattcattttaga |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||| |
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| T |
36223641 |
cacttcttggtaccctttaagaagaatttcctgcctcttataatatttagcaagtttcctttgtctctctgaaagattgaaatacaaaattcattttaga |
36223740 |
T |
|
| Q |
101 |
aacatcaaatacaaaatgcttacatatatgaaaatgttaacaaaaagggttgttgatttaagtactgattgttcttaagaataatccaaagccaaaatga |
200 |
Q |
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||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36223741 |
aacatcaaatacaaaatgcatacatatatgaaaatgttaacaaaaagggttgttcatttaagtactgattgttcttaagaataatccaaagccaaaatga |
36223840 |
T |
|
| Q |
201 |
gactccatttgcctttccggtatgcgatgttcatccatattgatcctccatgaaggttgcctagccatagacacatt |
277 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36223841 |
gactccatttgcctttccggtatgcgatgttcatccatattgatcctccatgaaggttgcctagccatagacacatt |
36223917 |
T |
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